Genome wide annotation for Human


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Documentation for package ‘org.Hs.eg.db’ version 3.5.0

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org.Hs.eg Bioconductor annotation data package
org.Hs.eg.db Bioconductor annotation data package
org.Hs.egACCNUM Map Entrez Gene identifiers to GenBank Accession Numbers
org.Hs.egACCNUM2EG Map Entrez Gene identifiers to GenBank Accession Numbers
org.Hs.egALIAS2EG Map between Common Gene Symbol Identifiers and Entrez Gene
org.Hs.egCHR Map Entrez Gene IDs to Chromosomes
org.Hs.egCHRLENGTHS A named vector for the length of each of the chromosomes
org.Hs.egCHRLOC Entrez Gene IDs to Chromosomal Location
org.Hs.egCHRLOCEND Entrez Gene IDs to Chromosomal Location
org.Hs.egENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
org.Hs.egENSEMBL2EG Map Ensembl gene accession numbers with Entrez Gene identifiers
org.Hs.egENSEMBLPROT Map Ensembl protein acession numbers with Entrez Gene identifiers
org.Hs.egENSEMBLPROT2EG Map Ensembl protein acession numbers with Entrez Gene identifiers
org.Hs.egENSEMBLTRANS Map Ensembl transcript acession numbers with Entrez Gene identifiers
org.Hs.egENSEMBLTRANS2EG Map Ensembl transcript acession numbers with Entrez Gene identifiers
org.Hs.egENZYME Map between Entrez Gene IDs and Enzyme Commission (EC) Numbers
org.Hs.egENZYME2EG Map between Entrez Gene IDs and Enzyme Commission (EC) Numbers
org.Hs.egGENENAME Map between Entrez Gene IDs and Genes
org.Hs.egGO Maps between Entrez Gene IDs and Gene Ontology (GO) IDs
org.Hs.egGO2ALLEGS Maps between Entrez Gene IDs and Gene Ontology (GO) IDs
org.Hs.egGO2EG Maps between Entrez Gene IDs and Gene Ontology (GO) IDs
org.Hs.egMAP Map between Entrez Gene Identifiers and cytogenetic maps/bands
org.Hs.egMAP2EG Map between Entrez Gene Identifiers and cytogenetic maps/bands
org.Hs.egMAPCOUNTS Number of mapped keys for the maps in package org.Hs.eg.db
org.Hs.egOMIM Map between Entrez Gene Identifiers and Mendelian Inheritance in Man (MIM) identifiers
org.Hs.egOMIM2EG Map between Entrez Gene Identifiers and Mendelian Inheritance in Man (MIM) identifiers
org.Hs.egORGANISM The Organism for org.Hs.eg
org.Hs.egPATH Mappings between Entrez Gene identifiers and KEGG pathway identifiers
org.Hs.egPATH2EG Mappings between Entrez Gene identifiers and KEGG pathway identifiers
org.Hs.egPFAM Maps between Manufacturer Identifiers and PFAM Identifiers
org.Hs.egPMID Map between Entrez Gene Identifiers and PubMed Identifiers
org.Hs.egPMID2EG Map between Entrez Gene Identifiers and PubMed Identifiers
org.Hs.egPROSITE Maps between Manufacturer Identifiers and PROSITE Identifiers
org.Hs.egREFSEQ Map between Entrez Gene Identifiers and RefSeq Identifiers
org.Hs.egREFSEQ2EG Map between Entrez Gene Identifiers and RefSeq Identifiers
org.Hs.egSYMBOL Map between Entrez Gene Identifiers and Gene Symbols
org.Hs.egSYMBOL2EG Map between Entrez Gene Identifiers and Gene Symbols
org.Hs.egUCSCKG This mapping has been deprecated and will no longer be available after bioconductor 2.6. See the details section for how you can live without it. For now, it is a map of UCSC "Known Gene" accession numbers with Entrez Gene identifiers
org.Hs.egUNIGENE Map between Entrez Gene Identifiers and UniGene cluster identifiers
org.Hs.egUNIGENE2EG Map between Entrez Gene Identifiers and UniGene cluster identifiers
org.Hs.egUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
org.Hs.eg_dbconn Collect information about the package annotation DB
org.Hs.eg_dbfile Collect information about the package annotation DB
org.Hs.eg_dbInfo Collect information about the package annotation DB
org.Hs.eg_dbschema Collect information about the package annotation DB