splom {lattice}R Documentation

Scatter Plot Matrices

Description

Draw Conditional Scatter Plot Matrices and Parallel Coordinate Plots

Usage

splom(formula,
      data,
      aspect = 1,
      between = list(x = 0.5, y = 0.5),
      panel = if (is.null(groups)) "panel.splom" else "panel.superpose",
      superpanel = "panel.pairs",
      pscales = 5,
      varnames, ...)
parallel(formula,
         data,
         between = list(x = 0.5, y = 0.5),
         panel = "panel.parallel",
         varnames,
         ...)

Arguments

formula a formula describing the structure of the plot, which should be of the form ~ x | g1 * g2 * ..., where x is a data frame or a matrix. Each of g1,g2,... must be either factors or shingles. The conditioning variables g1,g2,... may be omitted, in which case the leading ~ may also be omitted.
data a data frame containing values for any variables in the formula. By default the environment where the function was called from is used.
aspect aspect ratio of each panel (and subpanel), square by default for splom.
between to avoid confusion between panels and subpanels, the default is to show the panels of a splom plot with space between them.
panel Usual interpretation for parallel, namely the function that creates the display within each panel.
For splom, the terminology is slightly complicated. The role played by the panel function in most other high-level functions is played here by the superpanel function, which is responsible for the display for each conditional data subset. panel is simply an argument to the default superpanel function panel.pairs, and is passed on to it unchanged. It is used there to create each pairwise display. See panel.pairs for more useful options.
superpanel function that sets up the splom display, by default as a scatterplot matrix.
pscales a numeric value or a list, meant to be a less functional substitute for the scales argument in xyplot etc. This argument is passed to the superpanel function, and is handled by the default superpanel function panel.pairs. The help page for the latter documents this argument in more detail.
varnames character vector giving the names of the p variables in x. By default, the column names of x.
... other arguments

Details

splom produces Scatter Plot Matrices. The role usually played by panel is taken over by superpanel, which determines how the columns of x are to be arranged for pairwise plots. The only available option currently is panel.pairs.

Many of the finer customizations usually done via arguments to high level function like xyplot are instead done by panel.pairs for splom. These include control of axis limits, tick locations and prepanel calcultions. If you are trying to fine-tune your splom plot, definitely look at the panel.pairs help page. The scales argument is usually not very useful in splom, and trying to change it may have undesired effects.

parallel draws Parallel Coordinate Plots. (Difficult to describe, see example.)

These and all other high level Trellis functions have several arguments in common. These are extensively documented only in the help page for xyplot, which should be consulted to learn more detailed usage.

Value

An object of class ``trellis''. The `update' method can be used to update components of the object and the `print' method (usually called by default) will plot it on an appropriate plotting device.

Author(s)

Deepayan Sarkar deepayan@stat.wisc.edu

See Also

xyplot, Lattice, panel.pairs

Examples

data(iris)
super.sym <- trellis.par.get("superpose.symbol")
splom(~iris[1:4], groups = Species, data = iris,
      panel = panel.superpose,
      key = list(title = "Three Varieties of Iris",
                 columns = 3, 
                 points = list(pch = super.sym$pch[1:3],
                 col = super.sym$col[1:3]),
                 text = list(c("Setosa", "Versicolor", "Virginica"))))
splom(~iris[1:3]|Species, data = iris, 
      layout=c(2,2), pscales = 0,
      varnames = c("Sepal\nLength", "Sepal\nWidth", "Petal\nLength"),
      page = function(...) {
          ltext(x = seq(.6, .8, len = 4), 
                y = seq(.9, .6, len = 4), 
                lab = c("Three", "Varieties", "of", "Iris"),
                cex = 2)
      })
parallel(~iris[1:4] | Species, iris) 

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