BLASTN 2.0a19MP-WashU [05-Feb-1998] [Build sol2.5-ultra 01:47:25 05-Feb-1998] Reference: Gish, Warren (1994-1997). unpublished. Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: this program and its default parameter settings are optimized to find nearly identical sequences rapidly. To identify weak similarities encoded in nucleic acid, use BLASTX, TBLASTN or TBLASTX. Query= U51677 (2575 letters) Database: embl 442,729 sequences; 675,252,082 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N U51677 Human non-histone chromatin protein HMG1 (HMG1) ge... 12875 0.0 1 X80457 M.musculus HMG1 gene 2065 1.8e-198 5 X12597 Human mRNA for high mobility group-1 protein (HMG-1). 2131 7.7e-193 4 D63874 Human mRNA for HMG-1, complete cds. 2123 6.2e-191 4 >U51677 Human non-histone chromatin protein HMG1 (HMG1) gene, complete cds. Length = 2575 Plus Strand HSPs: Score = 12875 (1931.8 bits), Expect = 0.0, P = 0.0 Identities = 2575/2575 (100%), Positives = 2575/2575 (100%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGT 180 Query: 181 AATTAAAAGACAGTTTCCAATTGAGGATGCAAAAAAAAGCCTAGTTGGCATTCTCGTAGT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 AATTAAAAGACAGTTTCCAATTGAGGATGCAAAAAAAAGCCTAGTTGGCATTCTCGTAGT 240 Query: 241 GGGACGCTATTACATAGCAAAAGACATTGGTTTTGAGGATAATTTACTTAAATGTTACAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 GGGACGCTATTACATAGCAAAAGACATTGGTTTTGAGGATAATTTACTTAAATGTTACAA 300 Query: 301 CTTAAACTTACAAATTAATTATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 CTTAAACTTACAAATTAATTATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTG 360 Query: 361 AAGATATGGCAAAAGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 AAGATATGGCAAAAGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTC 420 Query: 421 CCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 CCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAG 480 Query: 481 TATCTTGCCTGTTTTTACTTCCCAGACACGTTTTACAGTAGAATCTGAGAGAAATTTAGC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 TATCTTGCCTGTTTTTACTTCCCAGACACGTTTTACAGTAGAATCTGAGAGAAATTTAGC 540 Query: 541 AAGCTACTTTGTCAGTTTAGAGTGTAAATGTACAATCAAAGTTTCTTAGCTAATACTTGT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 AAGCTACTTTGTCAGTTTAGAGTGTAAATGTACAATCAAAGTTTCTTAGCTAATACTTGT 600 Query: 601 TCATATTGGTTATATTTAAATAGTATAAAATTCCTGTTGGGTGGGAGTGTTCCCAGAGCA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 TCATATTGGTTATATTTAAATAGTATAAAATTCCTGTTGGGTGGGAGTGTTCCCAGAGCA 660 Query: 661 TTTGAATTAGACATTTGGTCTCCTTTGCCCAGTGTATCTCCTTTTGATCTTTTTATTTCT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 TTTGAATTAGACATTTGGTCTCCTTTGCCCAGTGTATCTCCTTTTGATCTTTTTATTTCT 720 Query: 721 TGAAAAATACTATCCCTTTGAAATAGTGTAATTGTAGAATGTTCATCTAGGGTTCTAGCT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 TGAAAAATACTATCCCTTTGAAATAGTGTAATTGTAGAATGTTCATCTAGGGTTCTAGCT 780 Query: 781 AGTATAAATTAAATAGTTGTAAATTAAGCTTTGGTTGTGAAGGATATTTAGTATATTATA 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 AGTATAAATTAAATAGTTGTAAATTAAGCTTTGGTTGTGAAGGATATTTAGTATATTATA 840 Query: 841 GTATTTGCACCCTGTCCAATGCATCACAGAAATTCACAGGCAGCTTTAAATAGCAATGCA 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 GTATTTGCACCCTGTCCAATGCATCACAGAAATTCACAGGCAGCTTTAAATAGCAATGCA 900 Query: 901 GTGTACACCTGATAGTATTTGTTTTTGTGATCTGTTAACTTAAAATCCTAAAATTAATTT 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 GTGTACACCTGATAGTATTTGTTTTTGTGATCTGTTAACTTAAAATCCTAAAATTAATTT 960 Query: 961 TTTTTTTAGTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGA 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 TTTTTTTAGTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGA 1020 Query: 1021 ACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACAC 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 ACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACAC 1080 Query: 1081 TGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 TGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGA 1140 Query: 1141 AAAGGTAAGAAGTGTGGGTTTGCTTGGTAAAATGATGACAAGTACGCCAGATGTATGATT 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 AAAGGTAAGAAGTGTGGGTTTGCTTGGTAAAATGATGACAAGTACGCCAGATGTATGATT 1200 Query: 1201 GTACTTAGTTTGAGGTGTAATAAGTTTTTAGGGTAACAGCTACATTAAGTATGGTGTTGA 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 GTACTTAGTTTGAGGTGTAATAAGTTTTTAGGGTAACAGCTACATTAAGTATGGTGTTGA 1260 Query: 1261 TATAAGTCCTCATCCTTCAAAGAATGCAGAGGACCAAATAAATTAGGGTTTTTTTGACTA 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 TATAAGTCCTCATCCTTCAAAGAATGCAGAGGACCAAATAAATTAGGGTTTTTTTGACTA 1320 Query: 1321 AAATGTAATCAGACTCAGACAAAGGCTGTGTACATTTATGTTGGTTTTGTTATTCCCCAG 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 AAATGTAATCAGACTCAGACAAAGGCTGTGTACATTTATGTTGGTTTTGTTATTCCCCAG 1380 Query: 1381 TATCTTGAAGTTCATGAAAATGTTGGTAGTCACTTCAAGTCAAAAATGAGCATTTTCAAA 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 TATCTTGAAGTTCATGAAAATGTTGGTAGTCACTTCAAGTCAAAAATGAGCATTTTCAAA 1440 Query: 1441 TGGCTTGGCATACAGTACAAAAACAGGCTAGACAAAGTAATATAGGCTATATTTTTCTTA 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1441 TGGCTTGGCATACAGTACAAAAACAGGCTAGACAAAGTAATATAGGCTATATTTTTCTTA 1500 Query: 1501 GTCATATCCTGAAACATTTATGTTCTTTTCCTTTAGATACTCAAAAAACCACAGCATCAC 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1501 GTCATATCCTGAAACATTTATGTTCTTTTCCTTTAGATACTCAAAAAACCACAGCATCAC 1560 Query: 1561 TAAGTTAAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAATAAGATTAAGGAAATCTAT 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1561 TAAGTTAAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAATAAGATTAAGGAAATCTAT 1620 Query: 1621 AACTCTTATAGTTCAGTAAATTGAAATATTAAATACTTAATTTTCAGCTTTAGTCATTCT 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1621 AACTCTTATAGTTCAGTAAATTGAAATATTAAATACTTAATTTTCAGCTTTAGTCATTCT 1680 Query: 1681 GAAAAGTGTTTATTTCTAGATGTTTCTTAACCTAATTGCATGTTTATTGACAAATTACCT 1740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 GAAAAGTGTTTATTTCTAGATGTTTCTTAACCTAATTGCATGTTTATTGACAAATTACCT 1740 Query: 1741 TTTTTTTTTAAGACCACATTTCCTACTAAGGATTAAGGTCTGACAGTGTAAACCTGTAGA 1800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1741 TTTTTTTTTAAGACCACATTTCCTACTAAGGATTAAGGTCTGACAGTGTAAACCTGTAGA 1800 Query: 1801 GTGCTTTTTTGCATTCAGAAGGTGGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCT 1860 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801 GTGCTTTTTTGCATTCAGAAGGTGGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCT 1860 Query: 1861 GGTTTTAATAGAGTTAGGATCTGGTAGATAATTGCACCTCAATGAGGCATAACTTTGCAA 1920 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1861 GGTTTTAATAGAGTTAGGATCTGGTAGATAATTGCACCTCAATGAGGCATAACTTTGCAA 1920 Query: 1921 ATATTAGACTATGCCATTTCATGAGTTATAGATTGTTATAATGATCTTGTATTTTTATGT 1980 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1921 ATATTAGACTATGCCATTTCATGAGTTATAGATTGTTATAATGATCTTGTATTTTTATGT 1980 Query: 1981 TCATTTATTGAAGTTCTAGTTATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATT 2040 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 TCATTTATTGAAGTTCTAGTTATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATT 2040 Query: 2041 TTGGTATAACTAGAATCTTGATTTCTTTCATAAAGTTCTGCCATGTTCTATTTCTTTCCT 2100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2041 TTGGTATAACTAGAATCTTGATTTCTTTCATAAAGTTCTGCCATGTTCTATTTCTTTCCT 2100 Query: 2101 TAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGGATATTGCTGCA 2160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2101 TAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGGATATTGCTGCA 2160 Query: 2161 TATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2161 TATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC 2220 Query: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCA 2340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCA 2340 Query: 2341 GTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAA 2400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2341 GTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAA 2400 Query: 2401 AGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTT 2460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2401 AGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTT 2460 Query: 2461 TTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTT 2520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2461 TTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTT 2520 Query: 2521 CAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAA 2575 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2521 CAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAA 2575 >X80457 M.musculus HMG1 gene Length = 2547 Plus Strand HSPs: Score = 2065 (309.8 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198 Identities = 449/482 (93%), Positives = 449/482 (93%), Strand = Plus / Plus Query: 2094 CTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCC-CT--TTGCTTTGGAAGGA 2150 CTTT T AA TTT TTT TT CT TGTT AT CTCC CT TTG TTTGGAAGGA Sbjct: 1944 CTTTG-TGAAGTTTTATTTTTTGTCTT-TGTTACATTCTCCTCTCCTTGTTTTGGAAGGA 2001 Query: 2151 TATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGC 2210 TATTGCTGC TA GAGCTAAAGGAAA CCTGATGCAGC AAAAAGGG GT GTCAAGGC Sbjct: 2002 TATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGGGTGGTCAAGGC 2061 Query: 2211 TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 TGAAAA AGCAAGAAAAAGAAGGAAGAGGA GA GA GAGGA GATGAAGAGGATGAGGA Sbjct: 2062 TGAAAAGAGCAAGAAAAAGAAGGAAGAGGAAGATGAGGAGGAGGATGAAGAGGATGAGGA 2121 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 GAGGAGGAAGA GA GAAGA GAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG Sbjct: 2122 AGAGGAGGAAGAAGAGGAAGACGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2181 Query: 2331 TTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCA 2390 TTCTAGCGCAGTTTTTTTTT CTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCA Sbjct: 2182 TTCTAGCGCAGTTTTTTTTT-CTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCA 2240 Query: 2391 CTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTAC 2450 CTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTAC Sbjct: 2241 CTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTAC 2300 Query: 2451 AGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTG 2510 AGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTG Sbjct: 2301 AGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTG 2360 Query: 2511 GTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCAT 2570 GTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGT TGGGGGTTGTAAATTGGCAT Sbjct: 2361 GTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTCTGGGGGTTGTAAATTGGCAT 2420 Query: 2571 GGAAA 2575 GGAAA Sbjct: 2421 GGAAA 2425 Score = 871 (130.7 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198 Identities = 337/480 (70%), Positives = 337/480 (70%), Strand = Plus / Plus Query: 797 TTGTAAATTAAGCTTTGGTTGTGAAGGATATTTAGTATATTATAGTATTTGCACCC-TGT 855 TTGTA TT AG T G T AA A ATTTAG AT TT T G AT TG A TGT Sbjct: 838 TTGTATCTTTAGAAATTGCTCAAAACTA-ATTTAGAATGTTTT-GCATCTGTATATATGT 895 Query: 856 CC-AATGCATCACAGAAATTCACAGGC-A-GCTTTAAATAGCA-ATGCAGTGTACACCTG 911 C AATG T ACA T C CA C A G T T AAT C A CA TG A A C G Sbjct: 896 CTGAATGTTT-ACACCC-TGCCCATACTATGGTATGAATTACTTAAACACTGCAGAGCAG 953 Query: 912 ATAGTATTTGTTTTTGTGATCTGTTAACTTAAAATCCTAAAATTA-ATTTTTT-TTTTAG 969 TA A GTT GTG T GTT TTAAAATCCTAAAA TA ATTT T TTTTAG Sbjct: 954 -TAC-AGA-GTTGA-GTGTTTAGTTTG-TTAAAATCCTAAAAGTACATTTCTGGTTTTAG 1008 Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 TTCGGCCTTCTTC T TTCTG TCTGAGTA CGCCC AAAATCAAAGG GA CATCCTGG Sbjct: 1009 TTCGGCCTTCTTCTTGTTCTGTTCTGAGTACCGCCCCAAAATCAAAGGCGAGCATCCTGG 1068 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 C T TCCATTGGTGATGTTGC AAGAAACT GGAGAGATGTGGAA AACACTGC GCAGA Sbjct: 1069 CTTATCCATTGGTGATGTTGCAAAGAAACTAGGAGAGATGTGGAACAACACTGCAGCAGA 1128 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGGTAAG 1149 TGACAAGCAGCC TATGA AAGAA GCTGC AAGCTGAAGGA AA TA GA AAGGTAAG Sbjct: 1129 TGACAAGCAGCCCTATGAGAAGAAAGCTGCCAAGCTGAAGGAGAAGTATGAGAAGGTAAG 1188 Query: 1150 AAGTGTG---GGTTTGCTTG-GTAAAATGATGACAAGTACGCCAGAT-GTATGATTGTA- 1203 AG TG GG T C G GT A GAT A A T G A T GT T ATT Sbjct: 1189 GAGGATGACAGGATACCCAGTGTTAGGGGATTATACTT--GATAACTCGTCTTATTTCCT 1246 Query: 1204 CTTAGTTTG-AGGTGTAATAAGTTTT--TAGGGTAACAGCTAC-ATTAAGTATGGTGTTG 1259 CTT GTTTG AGG T T GTTTT TA G AAC GC A A T GT GT TT Sbjct: 1247 CTTTGTTTGCAGGCTTCGTT-GTTTTCATACAGGAACGGCCAATAGTGTGTTCAGTTTTC 1305 Query: 1260 ATATAAGTCCTCAT 1273 TATAA TC T AT Sbjct: 1306 CTATAA-TC-TGAT 1317 Score = 771 (115.7 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198 Identities = 163/174 (93%), Positives = 163/174 (93%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 173 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCATTCTTTGTG 232 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 |||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 233 CAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAG 292 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAA 174 ||||| |||||||||||||||||||||||||||||||||||| | | ||||| | Sbjct: 293 TTTTCCAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTTAGAGATGCTGA 346 Score = 754 (113.1 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198 Identities = 228/293 (77%), Positives = 228/293 (77%), Strand = Plus / Plus Query: 250 TTAC-ATAGCAAAAG-ACATTGGTTTTGAGGATAATTTACTTAA-ATGTTACAACTTAAA 306 TTAC ATA A A A A TG TTT AGG T TA T AA AT T A T AA Sbjct: 392 TTACTATATGACTATTAAAGTGCTTT--AGGCTGGCATATTGAACATCTCT-ATGTCAAG 448 Query: 307 CTTACAAATTAATTATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATA 366 TTACAAAT AATT TTT TAGACCATGTCTGCTAAAGA AA GG AAATTTGAAGATA Sbjct: 449 TTTACAAAT-AATTCTTTC-TAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATA 506 Query: 367 TGGCAAAAGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAG 426 TGGCAAA GC GACAAGGC CGTTATGAAAGAGAAATGAAAACCTA ATCCC CCCAAAG Sbjct: 507 TGGCAAAGGCTGACAAGGCTCGTTATGAAAGAGAAATGAAAACCTACATCCCCCCCAAAG 566 Query: 427 GGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT--- 483 GGGAGAC AAAAAGAAGTTCAAGGA CCCAATGCACCCAAGAGGCCTCCGTGAGTAT Sbjct: 567 GGGAGACCAAAAAGAAGTTCAAGGACCCCAATGCACCCAAGAGGCCTCCGTGAGTATGAG 626 Query: 484 CTTGCCTGTTTTTACTTCCCAGACACGTTTTACAGTAGAATCTGAGAGAAATTTAGCAA 542 CTT G TTTTA TT AG GTTT A AGTAG T GA A ATT AGC A Sbjct: 627 CTTATGAGCTTTTATTTTG-AGTT--GTTT-AGAGTAGG-TAGGA-ATTGATTGAGCCA 679 Score = 715 (107.3 bits), Expect = 3.1e-117, Sum P(5) = 3.1e-117 Identities = 453/723 (62%), Positives = 453/723 (62%), Strand = Plus / Plus Query: 1545 AAAACCACAGCA-TCACTAAGTT-AAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAAT 1602 AAA AC G A T CTA GT AAATTA A T TG T C CT T A TAAA TAA Sbjct: 1451 AAAGTAACTGTACTGCCTATGTGCAAATTATTA-TATGTT-CACTTTGGATTAAAATAAA 1508 Query: 1603 AA-GATTAAGGA--AATCTATAACTCT-TATAGT-TCAGTA-AATTGA--AATATTAAAT 1654 A G TTAA AA CT T C TA A T TCA TA AAT GA AA ATT A Sbjct: 1509 ATTGCTTAAACTTTAAGCT-TGCCAAGGTA-ACTGTCATTAGAATGGAGGAAAATTGTA- 1565 Query: 1655 ACTTAATTTTCAGCT-TTAGTCATTCTGAAAAG-TGTTTATTTCTAGATGTTTCTTAACC 1712 A TT T T CA TTA AT C AAAAG T TT TTT T GA GT TT C Sbjct: 1566 A-TTCGTATACATAAATTAAA-ATACCTAAAAGCTAATT-TTTGTTGAGGTAATTTTTTC 1622 Query: 1713 T-AAT-TGCATGTTTATTGACAAATTACCTTTTTTTTTTAAGACCACATTTCCTACTAAG 1770 T AA TG T TTT TT A A A AC T CCA TTTC T CT G Sbjct: 1623 TGAAAATGTCTATTTTTTTAGATAC-ACACCCCCAACCTCCCCCCAGTTTTCTT-CTGTG 1680 Query: 1771 GATTAAGGTCTGACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGTGGCAGTG 1830 GATTAA TCTG C GTG AACCTGTAGA TGCT TTTTG TTCAGAAGGTGGCAGT Sbjct: 1681 GATTAAACTCTGGCTGTG--AACCTGTAGAATGCTGTTTTGTGTTCAGAAGGTGGCAGTA 1738 Query: 1831 TCTACCCTTTAATCAAAGTCTCTAC-ATTCTGGTTTTAATAGAGTTAGGATCTGGTAGAT 1889 T TAC CTTT ATCA T CT C A TC T A TAGA TTAGGAT TGGTA AT Sbjct: 1739 T-TACTCTTTGATCAGTCTGCCTTCTAGTCCTCATAAACTAGAATTAGGATGTGGTATAT 1797 Query: 1890 AATTGCACCTCAATGAGGCATAACTTTGCAAATATTAGACTATGCCATTTCATGAGTTAT 1949 AATTGCAC TCA TGAGGCATAAC CAAATATTAG CT G CATTTCATGAGTT T Sbjct: 1798 AATTGCACTTCAGTGAGGCATAACAACACAAATATTAGTCT--GACATTTCATGAGTTGT 1855 Query: 1950 AGATTGTTATAATGATCTTGTATTTTTATGTT-CATTTATTGAAGTT---CTAGTTATTT 2005 AGATTG A AAT T TT ATTTTTATGTT C TTT TT TT CTA TTATTT Sbjct: 1856 AGATTGC-A-AAT--TGTTC-ATTTTTATGTTGCCTTTTTTTCCCTTGGTCTAATTATTT 1910 Query: 2006 CTGGAGTTGCTGTGGATCTACAGATACGTG-ATATTTTGGTATAACTAGAATCTTGATTT 2064 G AG T C TGG CT T GTG A A TTTG T AA T AT TT T T Sbjct: 1911 GGGAAGGTACAATGGGCCTGTGTGTT-GTGGAGACTTTG-TG-AAGTTTTATTTTT-TGT 1966 Query: 2065 CTTTCATAAAGTTCTGCCATG-TTCTATTTCTTTCCTTAATCTTTTTTTCTTCCCTACTG 2123 CTTT TA A TTCT C T TT T TTT TA T T T C CTA G Sbjct: 1967 CTTTGTTACA-TTCTCCTCTCCTTGT-TTTGGAAGGATATTGCTGCCTACAGAGCTAAAG 2024 Query: 2124 TTTTATCCTCCCTTTGCTTT---GGAAG-GAT-ATTGCTGCATATCGAGCTA-AAGGA-A 2176 A CCT GC GG G G T A GCTG A A GAGC A AA A A Sbjct: 2025 GAAAA-CCTGATGCAGCGAAAAAGGGGGTGGTCAAGGCTGAAAA--GAGCAAGAAAAAGA 2081 Query: 2177 AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAA 2235 AG GA G AG A AGG G TG AGG TGA AA AG A GAA AAGA GGAA Sbjct: 2082 AGGAAGAGGAAGATGAGGAGGAGGATGAAGAGGATGAGGAAGAGGAGGAAGAAGA-GGAA 2140 Query: 2236 GAGGAGGAAGATGAGGAAGATGAAGAGGATGA 2267 GA GA GA GA GA GAAGATGA GA GATGA Sbjct: 2141 GACGAAGATGAAGAAGAAGATGATGATGATGA 2172 Score = 193 (29.0 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198 Identities = 101/154 (65%), Positives = 101/154 (65%), Strand = Plus / Plus Query: 581 GTTTCTTAGCTAATACTTGTTCATATTGGTTATATTTAAATAGT-A-TAAAATTCCTGTT 638 GTTTCTTAGCT A A T G T T G T TATTT A GT A T AA T G T Sbjct: 700 GTTTCTTAGCTGAGAATGGCTTGGGTCG-TG-TATTTGAGGGGTCAATGTAACTTAAGAT 757 Query: 639 GGGTGGGAGTGTTCCCAGAG-CATTTGAATT-AGACATTTGGTCTCCTTTGCCCAGTGTA 696 GGTGG A T TT AG CATTTGAA T AGA A T CTCCTTTGC CAGTGTA Sbjct: 758 AGGTGGTATTATTAGTGAAGGCATTTGAACTGAGAAACTCA--CTCCTTTGCACAGTGTA 815 Query: 697 TCTC--C---TTTTGAT-CTTTTTATTTCTTGAAAAAT 728 TC C C TTTTG T CTTTTT T TCTT A AAAT Sbjct: 816 TCACTACGATTTTTGGTTCTTTTTGTATCTTTAGAAAT 853 >X12597 Human mRNA for high mobility group-1 protein (HMG-1). Length = 1009 Plus Strand HSPs: Score = 2131 (319.7 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193 Identities = 429/431 (99%), Positives = 429/431 (99%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATAT GCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC Sbjct: 521 AAGGATATAGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 580 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT Sbjct: 581 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 640 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA Sbjct: 641 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 700 Query: 2326 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 2385 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA Sbjct: 701 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 760 Query: 2386 ACTCACTCC-TTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAA 2444 ACTCACTCC TTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAA Sbjct: 761 ACTCACTCCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAA 820 Query: 2445 CTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCT 2504 CTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCT Sbjct: 821 CTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCT 880 Query: 2505 GTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAAT 2564 GTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAAT Sbjct: 881 GTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAAT 940 Query: 2565 TGGCATGGAAA 2575 TGGCATGGAAA Sbjct: 941 TGGCATGGAAA 951 Score = 880 (132.0 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193 Identities = 176/176 (100%), Positives = 176/176 (100%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 408 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 468 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 524 Score = 754 (113.1 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193 Identities = 162/172 (94%), Positives = 162/172 (94%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG Sbjct: 197 TGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 256 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG Sbjct: 257 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 316 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 TTCAAGGATCCCAATGCACCCAAGAGGCCTCC T G T CTT CCT TT T Sbjct: 317 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTT-CCTCTTCT 368 Score = 750 (112.5 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193 Identities = 150/150 (100%), Positives = 150/150 (100%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 112 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 172 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 |||||||||||||||||||||||||||||| Sbjct: 173 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 202 >D63874 Human mRNA for HMG-1, complete cds. Length = 1194 Plus Strand HSPs: Score = 2123 (318.5 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191 Identities = 427/430 (99%), Positives = 427/430 (99%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 604 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 605 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGGTGAGGAAGATGAAGAGGAT 664 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 724 Query: 2326 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 2385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 784 Query: 2386 ACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAAC 2445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 ACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAAC 844 Query: 2446 TGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTG 2505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 845 TGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTG 904 Query: 2506 TCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATT 2565 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 905 TCCTGGTGGTATCTTCAATAGCCACTAACCCTGCCTGGTACAGTATGGGGGTTGTAAATT 964 Query: 2566 GGCATGGAAA 2575 |||||||||| Sbjct: 965 GGCATGGAAA 974 Score = 862 (129.3 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191 Identities = 174/176 (98%), Positives = 174/176 (98%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 432 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 492 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 493 TGACAAGCAGCCTTATGAAAAGAAGGCTGAAAAGCTGAAGGAAAAATACGAAAAGG 548 Score = 754 (113.1 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191 Identities = 162/172 (94%), Positives = 162/172 (94%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG Sbjct: 221 TGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 280 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG Sbjct: 281 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 340 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 TTCAAGGATCCCAATGCACCCAAGAGGCCTCC T G T CTT CCT TT T Sbjct: 341 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTT-CCTCTTCT 392 Score = 732 (109.8 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191 Identities = 148/150 (98%), Positives = 148/150 (98%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 77 ATGGGCAAAGGAGATCCTAAGAAGCCGAGACGGAAAATGTCATCATATGCATTTTTTGTG 136 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 196 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 |||||||||||||||||||||||||||||| Sbjct: 197 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 226 Parameters: ctxfactor=2.00 E=10 Query ----- As Used ----- ----- Computed ---- Strand MatID Matrix name Lambda K H Lambda K H +1 0 +5,-4 0.192 0.173 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a -1 0 +5,-4 0.192 0.173 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a Query Strand MatID Length Eff.Length E S W T X E2 S2 +1 0 2575 2575 10. 214 11 n/a 73 0.024 82 102 0.023 124 -1 0 2575 2575 10. 214 11 n/a 73 0.024 82 102 0.023 124 Statistics: Database: /dbEST1/wublast/database/embl/embl.fas Title: embl Release date: unknown Posted date: 12:04 PM GMT Feb 21, 2000 Format: BLAST # of letters in database: 675,252,082 # of sequences in database: 442,729 # of database sequences satisfying E: 1440 No. of states in DFA: 255 (255 KB) Total size of DFA: 313 KB (320 KB) Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00 No. of threads or processors used: 2 Search cpu time: 83.90u 2.19s 86.09t Elapsed: 00:01:01 Total cpu time: 85.13u 2.36s 87.49t Elapsed: 00:01:04 Start: Mon Feb 21 12:11:11 2000 End: Mon Feb 21 12:12:15 2000 WARNINGS ISSUED: 2