/*********************************************************************** * ** * Automatic header module from ASNTOOL * ************************************************************************/ #ifndef _ASNTOOL_ #include #endif static char * asnfilename = "blstspc.h22"; static AsnValxNode avnx[20] = { {20,"blastn" ,0,0.0,&avnx[1] } , {20,"blastp" ,1,0.0,&avnx[2] } , {20,"blastx" ,2,0.0,&avnx[3] } , {20,"tblastn" ,3,0.0,&avnx[4] } , {20,"tblastx" ,4,0.0,NULL } , {20,"unknown" ,0,0.0,&avnx[6] } , {20,"protein" ,1,0.0,&avnx[7] } , {20,"nucleotide" ,2,0.0,NULL } , {20,"none" ,0,0.0,&avnx[9] } , {20,"info" ,1,0.0,&avnx[10] } , {20,"warn" ,2,0.0,&avnx[11] } , {20,"error" ,3,0.0,&avnx[12] } , {20,"fatal" ,4,0.0,NULL } , {20,"notset" ,0,0.0,&avnx[14] } , {20,"plus1" ,1,0.0,&avnx[15] } , {20,"plus2" ,2,0.0,&avnx[16] } , {20,"plus3" ,3,0.0,&avnx[17] } , {20,"minus1" ,4,0.0,&avnx[18] } , {20,"minus2" ,5,0.0,&avnx[19] } , {20,"minus3" ,6,0.0,NULL } }; static AsnType atx[182] = { {401, "Blast-search" ,1,0,0,0,0,1,0,0,NULL,&atx[63],&atx[1],0,&atx[81]} , {0, "program" ,128,0,0,0,0,0,0,0,NULL,&atx[2],&avnx[0],0,&atx[3]} , {310, "ENUMERATED" ,0,10,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} , {0, "query" ,128,1,0,0,0,0,0,0,NULL,&atx[4],NULL,0,&atx[5]} , {411, "Bioseq" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[80]} , {0, "database" ,128,2,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[7]} , {323, "VisibleString" ,0,26,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} , {0, "parameters" ,128,3,0,1,0,0,0,0,NULL,&atx[8],NULL,0,&atx[64]} , {404, "Blast-parameters" ,1,0,0,0,0,1,0,0,NULL,&atx[63],&atx[9],0,&atx[66]} , {0, "first-threshold" ,128,0,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[11]} , {302, "INTEGER" ,0,2,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} , {0, "second-threshold" ,128,1,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[12]} , {0, "cutoff" ,128,2,0,1,0,0,0,0,NULL,&atx[16],&atx[13],0,&atx[17]} , {0, "evalue" ,128,0,0,0,0,0,0,0,NULL,&atx[14],NULL,0,&atx[15]} , {309, "REAL" ,0,9,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} , {0, "score" ,128,1,0,0,0,0,0,0,NULL,&atx[10],NULL,0,NULL} , {315, "CHOICE" ,0,-1,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} , {0, "cutoff2" ,128,3,0,1,0,0,0,0,NULL,&atx[16],&atx[18],0,&atx[20]} , {0, "evalue" ,128,0,0,0,0,0,0,0,NULL,&atx[14],NULL,0,&atx[19]} , {0, "score" ,128,1,0,0,0,0,0,0,NULL,&atx[10],NULL,0,NULL} , {0, "hitlist-size" ,128,4,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[21]} , {0, "nucl-penalty" ,128,5,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[22]} , {0, "nucl-reward" ,128,6,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[23]} , {0, "genetic-code" ,128,7,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[24]} , {0, "db-genetic-code" ,128,8,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[25]} , {0, "low-complexity-filtering" ,128,9,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[26]} , {0, "gapped-alignment" ,128,10,0,0,0,0,0,0,NULL,&atx[27],NULL,0,&atx[28]} , {301, "BOOLEAN" ,0,1,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} , {0, "gap-open" ,128,11,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[29]} , {0, "gap-extend" ,128,12,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[30]} , {0, "required-start" ,128,13,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[31]} , {0, "required-end" ,128,14,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[32]} , {0, "ethresh" ,128,15,0,1,0,0,0,0,NULL,&atx[14],NULL,0,&atx[33]} , {0, "max-num-passes" ,128,16,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[34]} , {0, "pseudo-count-const" ,128,17,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[35]} , {0, "other-options" ,128,18,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[36]} , {0, "gilist" ,128,19,0,1,0,0,0,0,NULL,&atx[38],&atx[37],0,&atx[39]} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[10],NULL,0,NULL} , {312, "SEQUENCE OF" ,0,16,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} , {0, "gifile" ,128,20,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[40]} , {0, "matrix" ,128,21,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[41]} , {0, "filter-string" ,128,22,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[42]} , {0, "entrez-query" ,128,23,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[43]} , {0, "word-size" ,128,24,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[44]} , {0, "db-length" ,128,25,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[45]} , {0, "searchsp-eff" ,128,26,0,1,0,0,0,0,NULL,&atx[14],NULL,0,&atx[46]} , {0, "hsp-range-max" ,128,27,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[47]} , {0, "block-width" ,128,28,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[48]} , {0, "perform-culling" ,128,29,0,1,0,0,0,0,NULL,&atx[27],NULL,0,&atx[49]} , {0, "strand-option" ,128,30,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[50]} , {0, "phi-pattern" ,128,31,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[51]} , {0, "use-real-db-size" ,128,32,0,1,0,0,0,0,NULL,&atx[27],NULL,0,&atx[52]} , {0, "use-best-align" ,128,33,0,1,0,0,0,0,NULL,&atx[27],NULL,0,&atx[53]} , {0, "is-rps-blast" ,128,34,0,1,0,0,0,0,NULL,&atx[27],NULL,0,&atx[54]} , {0, "tweak-parameters" ,128,35,0,1,0,0,0,0,NULL,&atx[27],NULL,0,&atx[55]} , {0, "smith-waterman" ,128,36,0,1,0,0,0,0,NULL,&atx[27],NULL,0,&atx[56]} , {0, "is-megablast" ,128,37,0,1,0,0,0,0,NULL,&atx[27],NULL,0,&atx[57]} , {0, "query-lcase-mask" ,128,38,0,1,0,0,0,0,NULL,&atx[38],&atx[58],0,&atx[60]} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[59],NULL,0,NULL} , {414, "Seq-loc" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[166]} , {0, "is-ooframe" ,128,39,0,1,0,0,0,0,NULL,&atx[10],NULL,0,&atx[61]} , {0, "endpoint-results" ,128,40,0,1,0,0,0,0,NULL,&atx[27],NULL,0,&atx[62]} , {0, "percent-identity" ,128,41,0,1,0,0,0,0,NULL,&atx[14],NULL,0,NULL} , {311, "SEQUENCE" ,0,16,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} , {0, "mask" ,128,4,0,1,0,0,0,0,NULL,&atx[59],NULL,0,&atx[65]} , {0, "matrix" ,128,5,0,1,0,0,0,0,NULL,&atx[66],NULL,0,&atx[78]} , {405, "Blast-matrix" ,1,0,0,0,0,1,0,0,NULL,&atx[63],&atx[67],0,&atx[121]} , {0, "is-protein" ,128,0,0,0,0,0,0,0,NULL,&atx[27],NULL,0,&atx[68]} , {0, "name" ,128,1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[69]} , {0, "comments" ,128,2,0,1,0,0,0,0,NULL,&atx[38],&atx[70],0,&atx[71]} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,NULL} , {0, "row-length" ,128,3,0,0,0,0,0,0,NULL,&atx[10],NULL,0,&atx[72]} , {0, "column-length" ,128,4,0,0,0,0,0,0,NULL,&atx[10],NULL,0,&atx[73]} , {0, "scores" ,128,5,0,0,0,0,0,0,NULL,&atx[38],&atx[74],0,&atx[75]} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[10],NULL,0,NULL} , {0, "karlinK" ,128,6,0,0,0,0,0,0,NULL,&atx[14],NULL,0,&atx[76]} , {0, "posFreqs" ,128,7,0,1,0,0,0,0,NULL,&atx[38],&atx[77],0,NULL} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[14],NULL,0,NULL} , {0, "return-parts" ,128,6,0,1,0,0,0,0,NULL,&atx[27],NULL,0,&atx[79]} , {0, "query-set" ,128,7,0,1,0,0,0,0,NULL,&atx[80],NULL,0,NULL} , {412, "Bioseq-set" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[97]} , {402, "Blast-request" ,1,0,0,0,0,1,0,0,NULL,&atx[16],&atx[82],0,&atx[101]} , {0, "init" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[83]} , {0, "motd" ,128,1,0,0,0,0,0,0,NULL,&atx[84],NULL,0,&atx[85]} , {305, "NULL" ,0,5,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} , {0, "db-info" ,128,2,0,0,0,0,0,0,NULL,&atx[84],NULL,0,&atx[86]} , {0, "db-info-specific" ,128,3,0,0,0,0,0,0,NULL,&atx[87],NULL,0,&atx[90]} , {417, "Blast-dbinfo-get" ,1,0,0,0,0,0,0,0,NULL,&atx[63],&atx[88],0,&atx[93]} , {0, "name" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[89]} , {0, "type" ,128,1,0,0,0,0,0,0,NULL,&atx[2],&avnx[5],0,NULL} , {0, "matrix-get" ,128,4,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[91]} , {0, "search" ,128,5,0,0,0,0,0,0,NULL,&atx[0],NULL,0,&atx[92]} , {0, "db-seq-get" ,128,6,0,0,0,0,0,0,NULL,&atx[93],NULL,0,&atx[98]} , {418, "Blast-seq-id" ,1,0,0,0,0,0,0,0,NULL,&atx[63],&atx[94],0,&atx[164]} , {0, "is-protein" ,128,0,0,0,0,0,0,0,NULL,&atx[27],NULL,0,&atx[95]} , {0, "database" ,128,1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[96]} , {0, "id" ,128,2,0,0,0,0,0,0,NULL,&atx[97],NULL,0,NULL} , {413, "Seq-id" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[59]} , {0, "db-redundant-ids-get" ,128,7,0,0,0,0,0,0,NULL,&atx[93],NULL,0,&atx[99]} , {0, "db-redundant-descr-get" ,128,8,0,0,0,0,0,0,NULL,&atx[93],NULL,0,&atx[100]} , {0, "fini" ,128,9,0,0,0,0,0,0,NULL,&atx[84],NULL,0,NULL} , {403, "Blast-response" ,1,0,0,0,0,1,0,0,NULL,&atx[16],&atx[102],0,&atx[8]} , {0, "init" ,128,0,0,0,0,0,0,0,NULL,&atx[103],NULL,0,&atx[106]} , {424, "Blast-version" ,1,0,0,0,0,0,0,0,NULL,&atx[63],&atx[104],0,&atx[174]} , {0, "version" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[105]} , {0, "date" ,128,1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,NULL} , {0, "motd" ,128,1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[107]} , {0, "error" ,128,2,0,0,0,0,0,0,NULL,&atx[108],NULL,0,&atx[111]} , {409, "Blast-error" ,1,0,0,0,0,1,0,0,NULL,&atx[63],&atx[109],0,&atx[154]} , {0, "level" ,128,0,0,0,0,0,0,0,NULL,&atx[2],&avnx[8],0,&atx[110]} , {0, "msg" ,128,1,0,1,0,0,0,0,NULL,&atx[6],NULL,0,NULL} , {0, "db-seq-get" ,128,3,0,0,0,0,0,0,NULL,&atx[4],NULL,0,&atx[112]} , {0, "db-redundant-ids-get" ,128,4,0,0,0,0,0,0,NULL,&atx[38],&atx[113],0,&atx[114]} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[97],NULL,0,NULL} , {0, "db-redundant-descr-get" ,128,5,0,0,0,0,0,0,NULL,&atx[38],&atx[115],0,&atx[119]} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[116],NULL,0,NULL} , {423, "Blast-defline" ,1,0,0,0,0,0,0,0,NULL,&atx[63],&atx[117],0,&atx[103]} , {0, "id" ,128,0,0,0,0,0,0,0,NULL,&atx[97],NULL,0,&atx[118]} , {0, "defline" ,128,1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,NULL} , {0, "db-info" ,128,6,0,0,0,0,0,0,NULL,&atx[38],&atx[120],0,&atx[128]} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[121],NULL,0,NULL} , {406, "Blast-dbinfo" ,1,0,0,0,0,1,0,0,NULL,&atx[63],&atx[122],0,&atx[133]} , {0, "is-protein" ,128,0,0,0,0,0,0,0,NULL,&atx[27],NULL,0,&atx[123]} , {0, "name" ,128,1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[124]} , {0, "definition" ,128,2,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[125]} , {0, "date" ,128,3,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[126]} , {0, "total-length" ,128,4,0,0,0,0,0,0,NULL,&atx[10],NULL,0,&atx[127]} , {0, "number-seqs" ,128,5,0,0,0,0,0,0,NULL,&atx[10],NULL,0,NULL} , {0, "db-info-specific" ,128,7,0,0,0,0,0,0,NULL,&atx[121],NULL,0,&atx[129]} , {0, "matrix" ,128,8,0,0,0,0,0,0,NULL,&atx[66],NULL,0,&atx[130]} , {0, "alignment" ,128,9,0,0,0,0,0,0,NULL,&atx[131],NULL,0,&atx[132]} , {416, "Seq-align-set" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[87]} , {0, "mask" ,128,10,0,0,0,0,0,0,NULL,&atx[133],NULL,0,&atx[137]} , {407, "Blast-mask" ,1,0,0,0,0,1,0,0,NULL,&atx[63],&atx[134],0,&atx[138]} , {0, "location" ,128,0,0,0,0,0,0,0,NULL,&atx[38],&atx[135],0,&atx[136]} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[59],NULL,0,NULL} , {0, "frame" ,128,1,0,0,0,0,0,0,NULL,&atx[2],&avnx[13],0,NULL} , {0, "kablk" ,128,11,0,0,0,0,0,0,NULL,&atx[138],NULL,0,&atx[143]} , {408, "Blast-KABlk" ,1,0,0,0,0,1,0,0,NULL,&atx[63],&atx[139],0,&atx[108]} , {0, "lambda" ,128,0,0,0,0,0,0,0,NULL,&atx[14],NULL,0,&atx[140]} , {0, "k" ,128,1,0,0,0,0,0,0,NULL,&atx[14],NULL,0,&atx[141]} , {0, "h" ,128,2,0,0,0,0,0,0,NULL,&atx[14],NULL,0,&atx[142]} , {0, "gapped" ,128,3,0,0,0,0,0,0,NULL,&atx[27],NULL,0,NULL} , {0, "parameters" ,128,12,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[144]} , {0, "queued" ,128,13,0,0,0,0,0,0,NULL,&atx[145],NULL,0,&atx[147]} , {421, "Blast-Queued" ,1,0,0,0,0,0,0,0,NULL,&atx[63],&atx[146],0,&atx[148]} , {0, "length" ,128,0,0,0,0,0,0,0,NULL,&atx[10],NULL,0,NULL} , {0, "start" ,128,14,0,0,0,0,0,0,NULL,&atx[148],NULL,0,&atx[150]} , {422, "Blast-Progress" ,1,0,0,0,0,0,0,0,NULL,&atx[63],&atx[149],0,&atx[116]} , {0, "completed" ,128,0,0,0,0,0,0,0,NULL,&atx[10],NULL,0,NULL} , {0, "progress" ,128,15,0,0,0,0,0,0,NULL,&atx[148],NULL,0,&atx[151]} , {0, "done" ,128,16,0,0,0,0,0,0,NULL,&atx[148],NULL,0,&atx[152]} , {0, "fini" ,128,17,0,0,0,0,0,0,NULL,&atx[84],NULL,0,&atx[153]} , {0, "phialign" ,128,18,0,0,0,0,0,0,NULL,&atx[154],NULL,0,&atx[158]} , {410, "Blast-phialign" ,1,0,0,0,0,1,0,0,NULL,&atx[63],&atx[155],0,&atx[4]} , {0, "numaligns" ,128,0,0,0,0,0,0,0,NULL,&atx[10],NULL,0,&atx[156]} , {0, "seqloc" ,128,1,0,0,0,0,0,0,NULL,&atx[38],&atx[157],0,NULL} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[59],NULL,0,NULL} , {0, "parts" ,128,19,0,0,0,0,0,0,NULL,&atx[38],&atx[159],0,&atx[170]} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[160],NULL,0,NULL} , {420, "Blast-parts" ,1,0,0,0,0,0,0,0,NULL,&atx[63],&atx[161],0,&atx[145]} , {0, "defline" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[162]} , {0, "sequence" ,128,1,0,0,0,0,0,0,NULL,&atx[169],&atx[163],0,NULL} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[164],NULL,0,NULL} , {419, "Blast-sequence" ,1,0,0,0,0,0,0,0,NULL,&atx[63],&atx[165],0,&atx[160]} , {0, "align" ,128,0,0,0,0,0,0,0,NULL,&atx[166],NULL,0,&atx[167]} , {415, "Seq-align" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[131]} , {0, "db-seq" ,128,1,0,0,0,0,0,0,NULL,&atx[168],NULL,0,NULL} , {304, "OCTET STRING" ,0,4,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} , {314, "SET OF" ,0,17,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} , {0, "mbalign" ,128,20,0,0,0,0,0,0,NULL,&atx[171],NULL,0,NULL} , {426, "MegaBlast-results" ,1,0,0,0,0,0,0,0,NULL,&atx[63],&atx[172],0,NULL} , {0, "mbhits" ,128,0,0,0,0,0,0,0,NULL,&atx[38],&atx[173],0,NULL} , {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[174],NULL,0,NULL} , {425, "MegaBlast-hit" ,1,0,0,0,0,0,0,0,NULL,&atx[63],&atx[175],0,&atx[171]} , {0, "id1" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[176]} , {0, "id2" ,128,1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[177]} , {0, "query-offset" ,128,2,0,0,0,0,0,0,NULL,&atx[10],NULL,0,&atx[178]} , {0, "subject-offset" ,128,3,0,0,0,0,0,0,NULL,&atx[10],NULL,0,&atx[179]} , {0, "query-end" ,128,4,0,0,0,0,0,0,NULL,&atx[10],NULL,0,&atx[180]} , {0, "subject-end" ,128,5,0,0,0,0,0,0,NULL,&atx[10],NULL,0,&atx[181]} , {0, "score" ,128,6,0,0,0,0,0,0,NULL,&atx[10],NULL,0,NULL} }; static AsnModule ampx[1] = { { "NCBI-Blast" , "blstspc.h22",&atx[0],NULL,NULL,0,0} }; static AsnValxNodePtr avn = avnx; static AsnTypePtr at = atx; static AsnModulePtr amp = ampx; /************************************************** * * Defines for Module NCBI-Blast * **************************************************/ #define BLAST_SEARCH &at[0] #define BLAST_SEARCH_program &at[1] #define BLAST_SEARCH_query &at[3] #define BLAST_SEARCH_database &at[5] #define BLAST_SEARCH_parameters &at[7] #define BLAST_SEARCH_mask &at[64] #define BLAST_SEARCH_matrix &at[65] #define BLAST_SEARCH_return_parts &at[78] #define BLAST_SEARCH_query_set &at[79] #define BLAST_REQUEST &at[81] #define BLAST_REQUEST_init &at[82] #define BLAST_REQUEST_motd &at[83] #define BLAST_REQUEST_db_info &at[85] #define BLAST_REQUEST_db_info_specific &at[86] #define BLAST_REQUEST_matrix_get &at[90] #define BLAST_REQUEST_search &at[91] #define BLAST_REQUEST_db_seq_get &at[92] #define BLAST_REQUEST_db_redundant_ids_get &at[98] #define BLAST_REQUEST_db_redundant_descr_get &at[99] #define BLAST_REQUEST_fini &at[100] #define BLAST_RESPONSE &at[101] #define BLAST_RESPONSE_init &at[102] #define BLAST_RESPONSE_motd &at[106] #define BLAST_RESPONSE_error &at[107] #define BLAST_RESPONSE_db_seq_get &at[111] #define BLAST_RESPONSE_db_redundant_ids_get &at[112] #define BLAST_RESPONSE_db_redundant_ids_get_E &at[113] #define BLAST_RESPONSE_db_redundant_descr_get &at[114] #define BLAST_RESPONSE_db_redundant_descr_get_E &at[115] #define BLAST_RESPONSE_db_info &at[119] #define BLAST_RESPONSE_db_info_E &at[120] #define BLAST_RESPONSE_db_info_specific &at[128] #define BLAST_RESPONSE_matrix &at[129] #define BLAST_RESPONSE_alignment &at[130] #define BLAST_RESPONSE_mask &at[132] #define BLAST_RESPONSE_kablk &at[137] #define BLAST_RESPONSE_parameters &at[143] #define BLAST_RESPONSE_queued &at[144] #define BLAST_RESPONSE_start &at[147] #define BLAST_RESPONSE_progress &at[150] #define BLAST_RESPONSE_done &at[151] #define BLAST_RESPONSE_fini &at[152] #define BLAST_RESPONSE_phialign &at[153] #define BLAST_RESPONSE_parts &at[158] #define BLAST_RESPONSE_parts_E &at[159] #define BLAST_RESPONSE_mbalign &at[170] #define BLAST_PARAMETERS &at[8] #define BLAST_PARAMETERS_first_threshold &at[9] #define BLAST_PARAMETERS_second_threshold &at[11] #define BLAST_PARAMETERS_cutoff &at[12] #define BLAST_PARAMETERS_cutoff_evalue &at[13] #define BLAST_PARAMETERS_cutoff_score &at[15] #define BLAST_PARAMETERS_cutoff2 &at[17] #define BLAST_PARAMETERS_cutoff2_evalue &at[18] #define BLAST_PARAMETERS_cutoff2_score &at[19] #define BLAST_PARAMETERS_hitlist_size &at[20] #define BLAST_PARAMETERS_nucl_penalty &at[21] #define BLAST_PARAMETERS_nucl_reward &at[22] #define BLAST_PARAMETERS_genetic_code &at[23] #define BLAST_PARAMETERS_db_genetic_code &at[24] #define BLAST_PARAMETERS_low_complexity_filtering &at[25] #define BLAST_PARAMETERS_gapped_alignment &at[26] #define BLAST_PARAMETERS_gap_open &at[28] #define BLAST_PARAMETERS_gap_extend &at[29] #define BLAST_PARAMETERS_required_start &at[30] #define BLAST_PARAMETERS_required_end &at[31] #define BLAST_PARAMETERS_ethresh &at[32] #define BLAST_PARAMETERS_max_num_passes &at[33] #define BLAST_PARAMETERS_pseudo_count_const &at[34] #define BLAST_PARAMETERS_other_options &at[35] #define BLAST_PARAMETERS_gilist &at[36] #define BLAST_PARAMETERS_gilist_E &at[37] #define BLAST_PARAMETERS_gifile &at[39] #define BLAST_PARAMETERS_matrix &at[40] #define BLAST_PARAMETERS_filter_string &at[41] #define BLAST_PARAMETERS_entrez_query &at[42] #define BLAST_PARAMETERS_word_size &at[43] #define BLAST_PARAMETERS_db_length &at[44] #define BLAST_PARAMETERS_searchsp_eff &at[45] #define BLAST_PARAMETERS_hsp_range_max &at[46] #define BLAST_PARAMETERS_block_width &at[47] #define BLAST_PARAMETERS_perform_culling &at[48] #define BLAST_PARAMETERS_strand_option &at[49] #define BLAST_PARAMETERS_phi_pattern &at[50] #define BLAST_PARAMETERS_use_real_db_size &at[51] #define BLAST_PARAMETERS_use_best_align &at[52] #define BLAST_PARAMETERS_is_rps_blast &at[53] #define BLAST_PARAMETERS_tweak_parameters &at[54] #define BLAST_PARAMETERS_smith_waterman &at[55] #define BLAST_PARAMETERS_is_megablast &at[56] #define BLAST_PARAMETERS_query_lcase_mask &at[57] #define BLAST_PARAMETERS_query_lcase_mask_E &at[58] #define BLAST_PARAMETERS_is_ooframe &at[60] #define BLAST_PARAMETERS_endpoint_results &at[61] #define BLAST_PARAMETERS_percent_identity &at[62] #define BLAST_MATRIX &at[66] #define BLAST_MATRIX_is_protein &at[67] #define BLAST_MATRIX_name &at[68] #define BLAST_MATRIX_comments &at[69] #define BLAST_MATRIX_comments_E &at[70] #define BLAST_MATRIX_row_length &at[71] #define BLAST_MATRIX_column_length &at[72] #define BLAST_MATRIX_scores &at[73] #define BLAST_MATRIX_scores_E &at[74] #define BLAST_MATRIX_karlinK &at[75] #define BLAST_MATRIX_posFreqs &at[76] #define BLAST_MATRIX_posFreqs_E &at[77] #define BLAST_DBINFO &at[121] #define BLAST_DBINFO_is_protein &at[122] #define BLAST_DBINFO_name &at[123] #define BLAST_DBINFO_definition &at[124] #define BLAST_DBINFO_date &at[125] #define BLAST_DBINFO_total_length &at[126] #define BLAST_DBINFO_number_seqs &at[127] #define BLAST_MASK &at[133] #define BLAST_MASK_location &at[134] #define BLAST_MASK_location_E &at[135] #define BLAST_MASK_frame &at[136] #define BLAST_KABLK &at[138] #define BLAST_KABLK_lambda &at[139] #define BLAST_KABLK_k &at[140] #define BLAST_KABLK_h &at[141] #define BLAST_KABLK_gapped &at[142] #define BLAST_ERROR &at[108] #define BLAST_ERROR_level &at[109] #define BLAST_ERROR_msg &at[110] #define BLAST_PHIALIGN &at[154] #define BLAST_PHIALIGN_numaligns &at[155] #define BLAST_PHIALIGN_seqloc &at[156] #define BLAST_PHIALIGN_seqloc_E &at[157] #define BLAST_DBINFO_GET &at[87] #define BLAST_DBINFO_GET_name &at[88] #define BLAST_DBINFO_GET_type &at[89] #define BLAST_SEQ_ID &at[93] #define BLAST_SEQ_ID_is_protein &at[94] #define BLAST_SEQ_ID_database &at[95] #define BLAST_SEQ_ID_id &at[96] #define BLAST_SEQUENCE &at[164] #define BLAST_SEQUENCE_align &at[165] #define BLAST_SEQUENCE_db_seq &at[167] #define BLAST_PARTS &at[160] #define BLAST_PARTS_defline &at[161] #define BLAST_PARTS_sequence &at[162] #define BLAST_PARTS_sequence_E &at[163] #define BLAST_QUEUED &at[145] #define BLAST_QUEUED_length &at[146] #define BLAST_PROGRESS &at[148] #define BLAST_PROGRESS_completed &at[149] #define BLAST_DEFLINE &at[116] #define BLAST_DEFLINE_id &at[117] #define BLAST_DEFLINE_defline &at[118] #define BLAST_VERSION &at[103] #define BLAST_VERSION_version &at[104] #define BLAST_VERSION_date &at[105] #define MEGABLAST_HIT &at[174] #define MEGABLAST_HIT_id1 &at[175] #define MEGABLAST_HIT_id2 &at[176] #define MEGABLAST_HIT_query_offset &at[177] #define MEGABLAST_HIT_subject_offset &at[178] #define MEGABLAST_HIT_query_end &at[179] #define MEGABLAST_HIT_subject_end &at[180] #define MEGABLAST_HIT_score &at[181] #define MEGABLAST_RESULTS &at[171] #define MEGABLAST_RESULTS_mbhits &at[172] #define MEGABLAST_RESULTS_mbhits_E &at[173]