This is TeX, Version 3.14159 (Web2C 7.3.1) (format=latex 2001.5.15) 6 SEP 2001 12:46 **PS1 (PS1.tex LaTeX2e <1998/12/01> patch level 1 Babel and hyphenation patterns for american, french, german, ngerman, n ohyphenation, loaded. (/usr/athena/share/texmf/tex/latex/base/article.cls Document Class: article 1999/01/07 v1.4a Standard LaTeX document class (/usr/athena/share/texmf/tex/latex/base/size10.clo File: size10.clo 1999/01/07 v1.4a Standard LaTeX file (size option) ) \c@part=\count79 \c@section=\count80 \c@subsection=\count81 \c@subsubsection=\count82 \c@paragraph=\count83 \c@subparagraph=\count84 \c@figure=\count85 \c@table=\count86 \abovecaptionskip=\skip41 \belowcaptionskip=\skip42 \bibindent=\dimen102 ) (PS1.aux) \openout1 = `PS1.aux'. LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 2. LaTeX Font Info: ... okay on input line 2. LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 2. LaTeX Font Info: ... okay on input line 2. LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 2. LaTeX Font Info: ... okay on input line 2. LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 2. LaTeX Font Info: ... okay on input line 2. LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 2. LaTeX Font Info: ... okay on input line 2. LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 2. LaTeX Font Info: ... okay on input line 2. Underfull \hbox (badness 10000) in paragraph at lines 4--9 [] LaTeX Font Info: External font `cmex10' loaded for size (Font) <7> on input line 20. LaTeX Font Info: External font `cmex10' loaded for size (Font) <5> on input line 20. Underfull \hbox (badness 10000) in paragraph at lines 63--64 [] Overfull \hbox (1.83392pt too wide) in paragraph at lines 79--82 []\OT1/cmr/m/n/10 Find the op-ti-mal global align-ment (and the re-sult-ing sco re) be-tween GAGC [] Overfull \hbox (5.40213pt too wide) in paragraph at lines 88--94 []\OT1/cmr/m/n/10 Find the best lo-cal align-ment be-tween AT-ACTCTC-C-TAAG and GACTCG- [] [1 ] Overfull \hbox (10.74715pt too wide) in paragraph at lines 136--136 []\OT1/cmtt/m/n/10 print Chromosome.genes['FUN26'].CDS().reverse_complement(). data[] [] [2] [3] (PS1.aux) ) Here is how much of TeX's memory you used: 217 strings out of 10901 2168 string characters out of 71609 48175 words of memory out of 263001 3213 multiletter control sequences out of 10000+0 6627 words of font info for 25 fonts, out of 400000 for 1000 14 hyphenation exceptions out of 1000 23i,8n,17p,123b,261s stack positions out of 300i,100n,500p,50000b,4000s Output written on PS1.dvi (3 pages, 7220 bytes).