BLASTN 2.0a19MP-WashU [05-Feb-1998] [Build sol2.5-ultra 01:47:25 05-Feb-1998] Reference: Gish, Warren (1994-1997). unpublished. Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: this program and its default parameter settings are optimized to find nearly identical sequences rapidly. To identify weak similarities encoded in nucleic acid, use BLASTX, TBLASTN or TBLASTX. Query= U51677 (2575 letters) Database: embl 442,729 sequences; 675,252,082 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N U51677 Human non-histone chromatin protein HMG1 (HMG1) ge... 12875 0.0 1 X80457 M.musculus HMG1 gene 2065 1.8e-198 5 X12597 Human mRNA for high mobility group-1 protein (HMG-1). 2131 7.7e-193 4 D63874 Human mRNA for HMG-1, complete cds. 2123 6.2e-191 4 L08048 Human non-histone chromosomal protein (HMG-1) retr... 2045 4.1e-188 4 Z11997 M.musculus mRNA for non-histone chromosomal high-m... 1979 4.1e-171 4 U00431 Mus musculus HMG-1 mRNA, complete cds. 1982 1.3e-170 4 L38477 Mus musculus (clone Clebp-1) high mobility group 1... 1973 3.5e-170 4 M64986 Rat amphoterin mRNA, complete cds. 1952 1.2e-169 4 AF009343 Mus musculus HMG-like protein (Trf) mRNA, comple... 1934 1.5e-164 4 Z95115 Human DNA sequence from BAC 445C9 on chromosome 22... 1565 2.9e-151 4 M21683;M21684 Pig nonhistone protein HMG1 mRNA, complete ... 2009 1.3e-148 3 Y00463 Rat mRNA for high mobility group protein HMG1 1492 1.9e-148 4 M63852 Rat high mobility group 1 protein synthetic gene, ... 1477 8.0e-148 4 X12796 Bovine mRNA for high mobility group 1 (HMG1) protein 2021 1.1e-147 3 D14718 Human chromosomal protein HMG1 related gene. 1388 1.0e-117 3 Y00365 Chinese hamster HMG-1 gene for high mobility group... 1219 3.2e-107 3 M26110 Bovine high-mobility-group protein (HMG-1) mRNA, 3... 1395 4.8e-77 2 Z46757 M.musculus mRNA for high mobility group 2 protein. 517 2.7e-68 4 X67668 M.musculus mRNA for high mobility group 2 protein 499 2.2e-62 4 U21933 Xenopus laevis high mobility group protein-1 (HMG-... 673 1.6e-60 3 J02895 Pig non-histone chromosomal protein (HMG2) mRNA, c... 526 1.2e-59 4 D84418 Rat mRNA for chromosomal protein HMG2, complete cds. 517 1.1e-58 4 X62534 H.sapiens HMG-2 mRNA 526 2.4e-58 4 D14314 Chicken mRNA for HMG-1, complete cds. 483 7.2e-58 4 L32859 Rainbow trout HMG-1 gene exons 2-5, complete cds. 542 2.9e-54 4 L13805 Homo sapiens (clone 06) high mobility group 1 prot... 1335 2.0e-53 1 U31513 Ambystoma mexicanum high mobility group protein-2 ... 498 9.4e-53 4 M83665 Human high mobility group 2 protein (HMG-2) gene, ... 576 1.8e-52 4 X63463 G.gallus HMG2a mRNA 507 4.3e-51 4 AF022465 Mus musculus high mobility group protein homolog... 474 3.7e-47 4 X02666 Trout mRNA for high mobility group protein HMG-T 516 1.4e-45 3 Z17240 Homo sapiens for mRNA encoding HMG2B. 526 7.5e-43 3 M83235 Gallus gallus non-histone chromosomal protein (HMG... 472 1.2e-40 3 M80574 Gallus domesticus high-mobility group-2 protein (H... 481 1.7e-40 3 L32954 Rainbow trout HMG-T2 gene exons 1-4, complete cds. 693 8.0e-40 3 D30765 Xenopus laevis mRNA for HMG-X protein, complete cds. 480 4.4e-37 3 X98857 L.fluviatilis mRNA for HMG protein 489 2.0e-33 3 Y10043 Homo sapiens mRNA for high mobility group protein ... 420 8.4e-31 3 AF003626 Homo sapiens cosmids IM0525, LC1233, Qc3C1, LB14... 453 3.6e-30 3 I14731 Sequence 10 from patent US 5451670. 871 6.2e-30 1 X80462 M.musculus HMG1-R-154 gene 619 8.8e-25 2 X80466 M.musculus HMG1-R-227 gene 619 3.7e-20 1 X80461 M.musculus HMG1-R-145 gene 593 5.3e-19 1 X80465 M.musculus HMG1-R-168 gene 570 6.4e-18 1 X80463 M.musculus HMG1-R-159 gene 569 6.7e-18 1 X80464 M.musculus HMG1-R-161 gene 568 7.4e-18 1 X80460 M.musculus HMG1-R-135 gene 565 1.0e-17 1 X80467 M.musculus HMG1-R-87 gene 563 1.3e-17 1 X80459 M.musculus HMG1-R-177 gene 562 1.6e-17 1 AC002526 Human PAC clone DJ0558L21 from Xq23, complete se... 343 6.6e-16 3 Z93931 Human DNA sequence from PAC 438G17 on chromosome 6... 340 9.7e-15 3 J03998 P.falciparum glutamic acid-rich protein gnen, comp... 427 2.3e-12 2 U83985 Rattus norvegicus alpha 1B adrenergic receptor gen... 397 1.8e-10 1 AF031904;U46930 Plasmodium berghei nucleosome assembly pr... 320 2.7e-10 2 M17284 Mouse transcriptional control element. 397 2.9e-10 1 Z50100 H.vulgare GAA-satellite DNA 363 9.6e-09 1 E10125 DNA encoding an immunogenicity protein. 413 1.1e-08 1 E10126 DNA encoding an immunogenicity protein of Leucocyt... 413 1.3e-08 1 U01345 Rattus norvegicus clone A-3 arylamine N-acetyltran... 351 2.4e-08 1 U01145 Rattus norvegicus clone 923 polymeric immunoglobul... 348 3.0e-08 1 U00762 Rattus norvegicus clone1 polymeric immunoglobulin ... 348 4.8e-08 1 M64239 Mouse T-cell receptor alpha/delta chain locus. 400 6.5e-08 1 AC004015 Human BAC clone RG333F24 from 7q11.2-q21, comple... 400 6.5e-08 1 L22660 Rat polymeric immunoglobulin receptor mRNA. 343 8.0e-08 1 U00763 Rattus norvegicus clone2 polymeric immunoglobulin ... 343 8.6e-08 1 D14636 Mouse mRNA for PEBP2a1 protein, complete cds. 396 9.0e-08 1 E08995 DNA encoding a protein involved in Leucocytozoon p... 391 1.0e-07 1 L13025 Rattus norvegicus (clone 2) mRNA sequence, 3' end ... 343 1.2e-07 1 M64933 Mouse nonfunctional sex-limited protein, and cytoc... 393 1.3e-07 1 X17093 Human HLA-F gene for human leukocyte antigen F 388 2.0e-07 1 U02506 Rattus norvegicus clone 7 polymeric immunoglobulin... 357 2.7e-07 1 AL021332 Human DNA sequence from PAC 398A12 on chromosome... 386 2.8e-07 1 U65590 Homo sapiens IL-1 receptor antagonist IL-1Ra (IL-1... 384 3.5e-07 1 AC004073 Human Chromosome X, complete sequence. 384 3.5e-07 1 X54171;X53282 H.sapiens NG2-6 DNA 383 3.5e-07 1 S72345 RI beta =cAMP-dependent protein kinase RI beta sub... 382 3.5e-07 1 Z97055 Human DNA sequence from PAC 388M5 on chromosome 22. 383 3.9e-07 1 U53810 Toxoplasma gondii GAA trinucleotide repeat region BS. 367 4.3e-07 1 Z68332 Human DNA sequence from cosmid V775G11, between ma... 381 4.7e-07 1 L13238 Rattus norvegicus polymeric immunoglobulin recepto... 335 5.0e-07 1 AB001489 Mus musculus DNA for polyimmunoglobulin receptor... 380 5.2e-07 1 X53858 Rat TTF-1 mRNA for thyroid nuclear factor 1 377 5.3e-07 1 Z29356 Gallus domesticus of h71t7 gene encoding G.domesti... 326 6.5e-07 1 AL021127 Mus musculus cosmid CMX137 containing part of Nsdhl 377 7.2e-07 1 L81783 Homo sapiens (subclone 9_d11 from P1 H26) DNA sequ... 373 8.8e-07 1 Y11666 M.musculus gene encoding hexokinase II, exon 1 (an... 374 9.0e-07 1 M55020;M37081 Rat nucleolin gene. 372 1.1e-06 1 D78176 Mouse DNA for primary transcript of atrial natriur... 369 1.2e-06 1 L21696 Human (clone pHG5) prothymosin alpha gene, complet... 316 1.3e-06 1 U95739 Human chromosome 16p11.2-p12 BAC clone CIT987SK-22... 371 1.4e-06 1 Z92547 Human DNA sequence from PAC 863K19 on chromosome X... 371 1.4e-06 1 Y12859 L.japonicus gln1, pge1 & krm genes 370 1.5e-06 1 X69986 R.norvegicus gene for GABAA receptor delta subunit 368 1.5e-06 1 AC002410 Human BAC clone RG264L19 from 7p15-p21, complete... 324 1.6e-06 2 A42910 Sequence 42 from Patent WO9502701. 316 1.6e-06 1 U72731 Acipenser fulvescens microsatellite LS-22, partial... 312 1.7e-06 1 S76368 ORF 5' of ECLF2...ECRF3=G protein-coupled receptor... 365 2.1e-06 1 L21693 Human (clone pHG2) prothymosin alpha gene, complet... 311 2.2e-06 1 M86409 Herpesvirus saimiri the most three prime end of th... 365 2.6e-06 1 X64346 Herpesvirus saimiri complete genome DNA 365 2.6e-06 1 X64743;S37462 G.gallus RSFR mRNA 351 2.7e-06 1 U59897 Macropus robustus hypoxanthine phosphoribosyltrans... 357 3.0e-06 1 AF002279;M26184 Mus musculus B29 gene, 5' upstream region... 357 3.1e-06 1 U19755 Mus domesticus thyroid transcription factor 1 gene... 362 3.3e-06 1 Z98552 Plasmodium falciparum DNA *** SEQUENCING IN PROGRE... 362 3.4e-06 1 U07886 Rattus norvegicus clone 15 polymeric immunoglobuli... 355 3.7e-06 1 M73820 Mouse sex-limited protein (SlpA) gene, exons 24-41... 361 3.7e-06 1 AC002545 Homo sapiens chromosome 17, clone 200g19, comple... 361 3.9e-06 1 L06178 Apis mellifera ligustica complete mitochondrial ge... 322 4.0e-06 2 U40719 Rattus norvegicus S-adenosylmethionine decarboxyla... 359 4.0e-06 1 U51243 Human alpha-albumin gene, complete cds. 358 4.5e-06 2 AC000022 Genomic sequence from Human Y, complete sequence. 352 4.9e-06 2 U08273 Rattus norvegicus Wistar polymeric immunoglobulin ... 350 4.9e-06 1 D87017 Human (lambda) DNA for immunoglobin light chain. 358 5.3e-06 1 AC004044 Arabidopsis thaliana BAC T5J8 from chromosome IV... 358 5.4e-06 1 AC004155 Mus musculus DNA from BAC 10818 containing the E... 358 5.4e-06 1 AF040950 Mus musculus killer cell inhibitory-like protein... 349 5.4e-06 1 M14483 Human prothymosin alpha mRNA, complete cds. 298 5.9e-06 1 AC002565 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-... 357 6.0e-06 1 U01348 Rattus norvegicus clone B-0/7 arylamine N-acetyltr... 351 6.3e-06 1 X13484;X15991;X15992 Mouse DNA for beta-casein 356 6.3e-06 1 U01343 Rattus norvegicus clone A-1 arylamine N-acetyltran... 351 6.4e-06 1 X89811 D.melanogaster DNA for SSRP2 gene 355 6.6e-06 1 AL008725 Human DNA sequence from PAC 148E22 on chromosome... 356 6.6e-06 1 Z73514;U00094 S.cerevisiae chromosome XVI reading frame O... 353 7.3e-06 1 X63507;S42523;S42569 M.musculus HOX-3.5 gene 354 7.4e-06 1 D38613 Mouse 921-L mRNA for presynaptic protein, complete... 347 7.6e-06 1 AF034569 Mus musculus anticoagulant protein C gene, compl... 354 7.9e-06 1 X83976 G.gallus repetitive DNA (ID:Ggamc1) 300 8.3e-06 1 S79240 Lox4=Ultrabithorax/abdominal-A homolog [Hirudo med... 351 8.3e-06 1 M14794 Human prothymosin alpha mRNA, lymphocyte clone pIF... 298 8.7e-06 1 M57718;M33937 Rat cytochrome P-450 IV A1 (CYP4A1) gene, c... 353 8.8e-06 1 X96770 S.cerevisiae chromosome XVI, left arm DNA 353 9.0e-06 1 AB010266 Mus musculus Creb-rp, Tnx and Cyp21 genes for cA... 353 9.0e-06 1 AF030001 Mus musculus major histocompatibility locus clas... 353 9.1e-06 1 AF005370 Alcelaphine herpesvirus 1 L-DNA, complete sequence. 352 1.0e-05 1 U05314 Saccharomyces cerevisiae nuclear polyadenylated RN... 349 1.1e-05 1 D37935 Yeast DNA for RNA binding protein, complete cds. 349 1.1e-05 1 Z95620 S.pombe chromosome II cosmid c3D6. 351 1.1e-05 1 L40039 Gallus gallus GAA microsatellite region. 294 1.2e-05 1 Z73546;U00094 S.cerevisiae chromosome XVI reading frame O... 349 1.2e-05 1 M60665 Rat prothymosin-alpha mRNA, 5' end. 291 1.4e-05 1 AB006702 Arabidopsis thaliana genomic DNA, chromosome 5, ... 342 1.4e-05 2 M32612 Rat neural cell adhesion molecule (NCAM-C) gene, e... 342 1.5e-05 1 Y13901 Homo sapiens FGFR-4 gene 348 1.5e-05 1 AL010164 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 348 1.5e-05 1 AC004095 Human Cosmid g1248a143 from 7q31.3, complete seq... 259 1.5e-05 2 M18837 Mouse MHC class I Q4 beta-2-microglobulin (Qb-1) g... 347 1.5e-05 1 X87461 M.merlangus DNA (CA)n (GGA)n polymorphic microsate... 294 1.7e-05 1 Y00354 Xenopus laevis gene for vitellogenin A2 345 2.0e-05 1 Z75553 Caenorhabditis elegans cosmid ZC443 344 2.3e-05 1 Z82052 Caenorhabditis elegans cosmid T25E12 344 2.3e-05 1 M15825 Chinese hamster nucleolin (C23) mRNA. 341 2.4e-05 1 Z71255 S.cerevisiae chromosome XVI 165536 bp sequence, ce... 312 2.7e-05 2 AF002843 Melipona bicolor microsatellite sequence Mbi254AAG. 286 2.8e-05 1 X15750;X15209 Rabbit skeletal muscle mRNA for ryanodine r... 341 3.1e-05 1 X15209 O.cuniculus mRNA for skeletal muscle ryanodine rec... 341 3.1e-05 1 Z83122 Caenorhabditis elegans cosmid R11A5 341 3.1e-05 1 Y08925 P.falciparum aarp3 gene, exon 332 3.4e-05 1 L21694 Human (clone pHG3) prothymosin alpha gene, complet... 283 4.3e-05 1 Y07738 M.musculus gene for vimentin 337 4.6e-05 1 Z74581 Human DNA sequence from cosmid E127C11 337 4.8e-05 1 AC002539 Homo sapiens chromosome 17, clone 195o20, comple... 337 4.8e-05 1 X07699 Mouse nucleolin gene 336 5.1e-05 1 Y07569 H.sapiens mRNA for PHAPI2a protein 328 5.5e-05 1 U31600 Heliocidaris erythrogramma HEHBOX10 (HeHbox10) gen... 330 5.7e-05 1 A21622 Dictoselium plasmid Ddp2 REp gene 268 6.2e-05 2 X75420 P.falciparum (FCR3) cpn60 gene. 333 6.3e-05 1 X67597 X.laevis mRNA for calreticulin (clone 3) 329 6.3e-05 1 D83006 Yeast DNA for MNN4 gene, complete cds. 333 6.3e-05 1 X79327 R.norvegicus (Sprague Dawley) calreticulin mRNA. 330 6.4e-05 1 X76589 H.sapiens DNA 3' flanking simple sequence region c... 282 6.6e-05 1 D78308 Rat mRNA for calreticulin, complete cds. 330 7.0e-05 1 X53363 Rat mRNA for calreticulin 330 7.1e-05 1 AL021812 Human DNA sequence from cosmid U86H4 on chromoso... 333 7.3e-05 1 Y07969 H.sapiens mRNA for APRIL protein 328 7.3e-05 1 AF004294 Mus musculus myelin transcription factor 1 mRNA,... 332 7.4e-05 1 AB002381 Human mRNA for KIAA0383 gene, partial cds. 332 7.4e-05 1 U70439 Human silver-stainable protein SSP29 mRNA, complet... 328 7.7e-05 1 AL010148 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 331 8.1e-05 1 Z82196 Human DNA sequence from PAC 288L1 332 8.2e-05 1 AC002287 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-... 332 8.2e-05 1 L13297 Rattus norvegicus tandem repeat mRNA. 285 8.2e-05 1 X86100 R.norvegicus BSP gene 330 9.1e-05 1 AF015725 Homo sapiens chromosome 21q22.2 cosmid clone D68... 330 0.00010 1 AF027865 Mus musculus Major Histocompatibility Locus clas... 330 0.00010 1 AC003664 Homo sapiens chromosome 17, clone hCIT54K19, com... 330 0.00010 1 X17199 Chicken mRNA for nucleolin C23 327 0.00011 1 M81784 Rattus norvegicus K+ channel mRNA, sequence. 327 0.00011 1 X54504 D. melanogaster mRNA for troponin-T (DNA region wi... 324 0.00011 1 M18061 Xenopus laevis vitelloginin gene, complete cds. 328 0.00011 1 X51478 Dictyostelium discoideum Ddp2 plasmid DNA containi... 268 0.00011 2 AL010149 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 291 0.00012 2 M33025 Rattus norvegicus parathymosin mRNA, 3' end. 271 0.00013 1 M20616 Rat spleen parathymosin-alpha mRNA, 3' end. 271 0.00013 1 AB006705 Arabidopsis thaliana genomic DNA, chromosome 5, ... 285 0.00013 2 M60664 Rat prothymosin-alpha mRNA, 5' end. 269 0.00014 1 U82710 Sorex araneus locus 2 microsatellite sequence. 279 0.00015 1 Z28201;Y13137 S.cerevisiae chromosome XI reading frame OR... 324 0.00015 1 X56824 M.musculus gene for haem oxygenase (exon 1) 321 0.00016 1 Z73910 Caenorhabditis elegans cosmid M117 325 0.00017 1 L15351 Mesocricetus auratus alpha-cardiac myosin heavy ch... 325 0.00017 1 U82671 Homo sapiens cosmids Qc14E2, Qc12H12, Qc11F9, Qc10... 325 0.00017 1 L27124 Rattus sp. NRD convertase (NRDC) mRNA, complete cds. 323 0.00018 1 M55298 Dictyostelium discoideum plasmid Ddp2 trans-acting... 285 0.00018 2 X93208 Rattus sp. mRNA for NRD2 convertase 323 0.00018 1 U35323 Mus musculus H2-M alpha chain (H2-Ma) gene, H2-M b... 324 0.00019 1 AC000399 Genomic sequence from Mouse 9, complete sequence. 324 0.00019 1 U36888 Triticum aestivum clone TCT4 microsatellite sequence. 267 0.00019 1 X06343 Cowpox virus (CPV) 160K gene 5' end for major comp... 315 0.00023 1 L21695 Human (clone pHG4) prothymosin alpha gene, complet... 267 0.00023 1 AC002464 Human BAC clone RG331P03, complete sequence. 322 0.00023 1 U88154 Human proline and glutamic acid rich nuclear prote... 320 0.00024 1 X15382;X17412 D.discoideum vegetative specific gene V18 g... 319 0.00024 1 D88193 Brassica rapa DNA for S-receptor kinase, complete ... 321 0.00025 1 U88153 Human p160 mRNA, complete cds. 320 0.00025 1 U14974 Saccharomyces cerevisiae Nmd2p (NMD2) gene, comple... 319 0.00028 1 U93275 Mus musculus glucokinase gene, 5' flanking region. 318 0.00028 1 U28158 Saccharomyces cerevisiae Ifs1p (IFS1) gene, comple... 319 0.00029 1 U12137 Saccharomyces cerevisiae Upf2p (UPF2) gene, comple... 319 0.00029 1 U76750 Lytechinus pictus mitotic apparatus protein p62 mR... 318 0.00030 1 A12522 Ag169 clone 310 0.00030 1 U37541 Drosophila melanogaster complete mitochondrial gen... 281 0.00031 2 U10556;U00093 Saccharomyces cerevisiae chromosome VIII co... 319 0.00032 1 M60025;J04626;M22228 Rat carcinoembryonic antigen (CEA3) ... 312 0.00036 1 U11584 Drosophila melanogaster Oregon-R mitochondrial A+T... 281 0.00037 2 X00551 Yeast gene for subunit VI of ubiquinol-cytochrome ... 307 0.00038 1 Z82185 Human DNA sequence from Fosmid 24E5 317 0.00039 1 Y10687 Sulfolobus acidocaldarius gene encoding purine NTPase 315 0.00039 1 E09676 cDNA encoding mouse mC26. 316 0.00040 1 D16108 Mouse mC26 gene for GlyCAM-1, exon 1-4. 316 0.00040 1 X64324 R.esculenta mRNA for calsequestrin 314 0.00042 1 AJ000496 Rattus norvegicus mRNA for cyclic nucleotide-gat... 315 0.00043 1 D00319 Cowpox virus A-type inclusion protein gene and fla... 315 0.00043 1 M18978 T.brucei kinetoplast maxicircle DNA, variable regi... 311 0.00044 1 AL009007 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 315 0.00045 1 M60858;J05584 Human nucleolin gene, complete cds. 315 0.00047 1 M92988 Mouse calregulin (ERp60) mRNA, complete cds. 312 0.00048 1 U48809 Rattus norvegicus neural zinc finger factor-1 (NZF... 314 0.00048 1 Z93385 Caenorhabditis elegans cosmid M01E5 315 0.00048 1 AB009050 Arabidopsis thaliana genomic DNA, chromosome 5, ... 315 0.00049 1 AF017349 Mus musculus desmoglein 3 (Dsg3) gene, intron se... 312 0.00050 1 X14926 Mouse mRNA for calreticulin 312 0.00050 1 D78303 Rattus norvegicus brain mRNA, complete cds. 313 0.00050 1 S51239 calreticulin [Aplysia californica=marine snails, m... 311 0.00053 1 AF003627 Homo sapiens cosmids Qc5E3, LC1833, IC0177, Qc12... 314 0.00054 1 AC003959;AC000947;AC000948;AC000949;AC000950;AC001209;L81... 314 0.00054 1 V01144 Sea urchin (P. miliaris) gene for histones H1, H4,... 313 0.00056 1 S38627 {pseudogene} PTMAP5=prothymosin alpha [human, Geno... 302 0.00056 1 L34021 Mus musculus (clone E5.72R) Huntington disease (hd... 308 0.00059 1 AB006698 Arabidopsis thaliana genomic DNA, chromosome 5, ... 313 0.00060 1 AC002497 Human Cosmid g1940a142 from 7q31.3, complete seq... 329 0.00063 2 L28825 Plasmodium falciparum polymorphic antigen, complet... 307 0.00063 1 AE000658;AE000521 Homo sapiens T-cell receptor alpha delt... 303 0.00064 2 Z48483 S.cerevisiae chromosome XVI cosmid 8132. 312 0.00066 1 U33335;U00094 Saccharomyces cerevisiae chromosome XVI, le... 312 0.00066 1 Z15118 T.brucei kinetoplast maxicircle variable region DNA 311 0.00069 1 M35983 Rat ID-A element in the S-100 beta-subunit gene. 261 0.00071 1 M94286 Trypanosoma brucei brucei kinetoplast maxicircle g... 311 0.00073 1 AF004295 Mus musculus myelin transcription factor 1-like ... 310 0.00073 1 M26549;J05039 Human alpha-1 collagen type IV gene, exon 19. 254 0.00073 1 U95743 Homo sapiens chromosome 16 BAC clone CIT987-SK65D3... 325 0.00080 2 L20955 Human promthymosin alpha (PTMA) gene, complete cds. 255 0.00080 1 M24398 Human parathymosin mRNA, complete cds. 304 0.00081 1 X14061 M.musculus beta-globin complex DNA for y, bh0, bh1... 310 0.00082 1 AF021335 Mus musculus T cell receptor gamma locus, TCR ga... 310 0.00082 1 X71128 M.musculus repetitive sequence 297 0.00083 1 U72915 Human putative DNA dependent ATPase and helicase (... 256 0.00085 1 U86338 Mus musculus zinc finger protein Png-1 (Png-1) mRN... 308 0.00090 1 U53154 Caenorhabditis elegans cosmid C33G8. 309 0.00091 1 J03902 Plasmodium falciparum p101/acidic basic repeat ant... 308 0.00091 1 L13462 Bovine calreticulin (brain isoform) mRNA, complete... 305 0.00092 1 U73479 Homo sapiens cosmid U138C3, complete sequence. 279 0.00099 2 Z69714 Human DNA sequence from cosmid cN37F10 on chromoso... 308 0.0010 1 M12865 Yeast (S.cerevisiae) CAT repetitive element, clone... 257 0.0010 1 AC002078 Human BAC clone RG111H14 from 7q22, complete seq... 308 0.0010 1 U95741 Human chromosome 16p13.11 BAC clone CIT987SK-777B5... 308 0.0010 1 Z97341 Arabidopsis thaliana DNA chromosome 4, ESSA I cont... 308 0.0010 1 AF017336 Homo sapiens genomic clone X17/P1-68 encoding RN... 306 0.0011 1 U51583 Rattus norvegicus zinc finger homeodomain enhancer... 306 0.0011 1 L22219 Plasmodium falciparum transmission-blocking target... 307 0.0011 1 L08135 Plasmodium falciparum transmission blocking target... 307 0.0011 1 L04162 Plasmodium falciparum (clone sY) s230 mRNA, comple... 307 0.0011 1 Y12573 D.melanogaster Jun and 14-3-3 zeta gene 307 0.0011 1 U58758 Caenorhabditis elegans cosmid ZK1127. 307 0.0011 1 Z78421 Human DNA sequence from cosmid N121E8 307 0.0011 1 Z80773 Human DNA sequence from cosmid F91B7 307 0.0011 1 AC003092 Human BAC clone RG335O22 from 7q21-q22, complete... 307 0.0011 1 X67598 X.laevis mRNA for calreticulin (clone 8) 302 0.0011 1 U93037 Homo sapiens elastin gene, exons 5-27 and alternat... 306 0.0012 1 U20951 Cricetulus griseus centromere autoantigen protein ... 304 0.0012 1 M19359;M19354;M19360;M19361;M19362;M19363 Rat gamma-cryst... 321 0.0012 2 AF035397 Homo sapiens cosmids Qc15C1 and 94B6 from Xq28, ... 306 0.0012 1 AC002465 Human BAC clone RG343P13 from 7q31, complete seq... 306 0.0013 1 X75091 H.sapiens mRNA for HLA-DR associated protein II (P... 298 0.0013 1 M14630 Human prothymosin alpha mRNA, complete cds. 300 0.0013 1 M33024 xattus norvegicus prothymosin-alpha and parathymos... 295 0.0014 1 M20035 Rat prothymosin-alpha mRNA, complete cds. 295 0.0014 1 D44602 Saccharomyces cerevisiae chromosome VI cosmid 9765. 304 0.0015 1 AF003130 Caenorhabditis elegans cosmid F55A12. 304 0.0015 1 D50617;D44605 Saccharomyces cerevisiae chromosome VI comp... 304 0.0015 1 X64616;S55421 O.odorata chloroplast ORF80 (exon 1 and 2) ... 302 0.0016 1 Y00789 Chicken mRNA fragment for calsequestrin homolog 301 0.0016 1 M26708 Human prothymosin alpha mRNA (ProT-alpha), complet... 298 0.0016 1 AC001069 Homo sapiens (subclone 1_e1 from P1 H63) DNA seq... 302 0.0016 1 M17440;J05095 Mouse MHC (H-2) S region complement compone... 303 0.0017 1 D45198 Human mRNA for template acyivating factor-I alpha,... 298 0.0017 1 AB002322 Human mRNA for KIAA0324 gene, partial cds. 302 0.0018 1 L05517 Plasmodium chabaudi DNA sequence, exon 1. 299 0.0018 1 L81705 Homo sapiens (subclone 1_e10 from P1 H58) DNA sequ... 301 0.0018 1 AL010252 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 301 0.0019 1 L07545 Leishmania tarentolae kinetoplast mitochondrial MU... 296 0.0019 1 X15147 Mouse Tla region T1c pseudogene for class I antige... 301 0.0020 1 X69838;S57461 H.sapiens mRNA for G9a 300 0.0020 1 Z98547 Plasmodium falciparum DNA *** SEQUENCING IN PROGRE... 300 0.0020 2 AL010226 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 301 0.0020 1 L36901;M62622 Saccharomyces cerevisiae mitochondrion DNA ... 298 0.0020 1 U20857 Mus musculus RNA1 homolog (Fug1) mRNA, complete cds. 298 0.0021 1 S76367 heat shock protein 90=excretory/secretory antigen ... 250 0.0021 1 M10296 Mouse DNA with homology to EBV IR3 repeat, segment... 261 0.0021 1 L04508 Plasmodium berghei heat shock related protein gene... 298 0.0022 1 M30298;J05078 Rat cardiac myosin light chain 2 (MLC-2) ge... 280 0.0022 1 J04802 Human prothymosin-alpha pseudogene, complete seque... 286 0.0022 1 E02043 5' untranslated region containing promoter of poxv... 284 0.0022 1 U72736 Acipenser fulvescens microsatellite LS-57, partial... 285 0.0022 1 X60441;S39572 L.esculentum GTom5 gene for phytoene synthase 299 0.0023 1 M86564;M38736;M55393 Rat alpha-prothymosin mRNA, complete... 295 0.0023 1 X55326 R.rattus mRNA for alpha-prothymosin 295 0.0023 1 M93651 Human set gene, complete cds. 298 0.0023 1 U91325 Human chromosome 16p13.11 BAC clone CIT987SK-731F1... 300 0.0023 1 Z55080 H.sapiens CpG island DNA genomic Mse1 fragment, cl... 248 0.0024 1 Z97342 Arabidopsis thaliana DNA chromosome 4, ESSA I cont... 292 0.0024 2 U08110 Mus musculus RNA1 homolog (Fug1) mRNA, complete cds. 298 0.0024 1 AC004220;AC001007;AC001008;AC001009;AC001010;L78766;L7876... 256 0.0025 2 Z77659 Caenorhabditis elegans cosmid F23B12 281 0.0028 2 AC002981 Homo sapiens Xp22 BAC GS279A12 (Genome Systems) ... 298 0.0029 1 AB006699 Arabidopsis thaliana genomic DNA, chromosome 5, ... 283 0.0030 2 X55038 Mouse mCENP-B gene for centromere autoantigen B (C... 296 0.0031 1 Y08924 P.falciparum mRNA for AARP2 protein 296 0.0032 1 U80437 Caenorhabditis elegans cosmid C43E11. 297 0.0032 1 L34363 Human X-linked nuclear protein (XNP) gene, complet... 296 0.0032 1 U09820 Human helicase II (RAD54L) mRNA, complete cds. 296 0.0033 1 X62880 S.scrofa mRNA for calcium release channel (CRC) 296 0.0035 1 M91451 Sus scrofa ryanodine receptor (RYR1) mRNA, complet... 296 0.0035 1 M91452 Sus scrofa ryanodine receptor (RYR1) gene, complet... 296 0.0035 1 X69465 S.scrofa gene for skeletal muscle ryanodine receptor 296 0.0035 1 X07453;X66268 Plasmodium falciparum 11-1 gene part 1 295 0.0035 1 AC003994 Mouse cosmid ma53a271 from 14D1-D2 (Mouse T-Cell... 296 0.0035 1 X94183 S.tuberosum mRNA for phosphoinositide-specific pho... 293 0.0036 1 U31631 Dictyostelium discoideum class II 294 0.0037 1 AF025480 Bison bison Na-Ca+K exchanger (BISNCKX) mRNA, pa... 288 0.0037 1 M10668 Mouse DNA with homology to EBV IR3 repeat, segment... 256 0.0037 1 I26753 Sequence 52 from patent US 5559223. 250 0.0038 1 U77627 Danio rerio pes mRNA, complete cds. 293 0.0038 1 D26046 Mouse mRNA for AT motif-binding factor (ATBF1), co... 295 0.0038 1 Y16168 Allogromia laticollaris mRNA for beta-tubulin 292 0.0039 1 X82260 H.sapiens mRNA for RanGTPase activating protein 1 292 0.0039 1 AC002505;AC003008 Arabidopsis thaliana chromosome II BAC ... 276 0.0039 2 U93872 Kaposi's sarcoma-associated herpesvirus glycoprote... 295 0.0040 1 D45132 Human kidney mRNA for zinc-finger DNA-binding prot... 294 0.0041 1 U17838 Human zinc finger protein RIZ mRNA, complete cds. 294 0.0041 1 Z75287 M.musculus mRNA for Stra8 protein 290 0.0044 1 D43695 Anthoceros formosae chloroplast DNA for ndhK, atpB... 293 0.0046 1 U72938 Human putative DNA dependent ATPase and helicase (... 296 0.0046 2 Z72807;Y13135 S.cerevisiae chromosome VII reading frame O... 292 0.0046 1 X76053 S.cerevisiae (s288c) RIF1, DPB3, YmL27 and SNF5 ge... 244 0.0046 2 U72937 Human putative DNA dependent ATPase and helicase (... 296 0.0046 2 U75653 Human zinc finger helicase (Znf-HX) mRNA, complete... 296 0.0047 2 U72936 Human putative DNA dependent ATPase and helicase (... 296 0.0047 2 X91619 R.norvegicus mRNA for sca1 protein 292 0.0050 1 L27592 Plasmodium chabaudi adami erythrocyte membrane ant... 289 0.0050 1 Z85983 X.laevis mRNA for NOVA protein 289 0.0051 1 L32832 Homo sapiens zinc finger homeodomain protein (ATBF... 292 0.0052 1 AF022957 Mus musculus cerebellar leucine rich acidic nucl... 284 0.0054 1 AF024533 Homo sapiens cosmid 123E15, complete sequence. 292 0.0054 1 AC002044 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-... 292 0.0054 1 M58633 Mouse p58/GTA protein kinase mRNA, complete cds. 289 0.0055 1 AL010241 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 291 0.0055 1 X80760 C.coturnix clusterin gene 291 0.0056 1 AF025664 Bos taurus Na-Ca+K exchanger (BOSNCKX) mRNA, par... 288 0.0057 1 U86962 Dictyostelium discoideum MigA (migA) gene, complet... 258 0.0058 2 AL009015 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 282 0.0058 2 X56135 Mouse mRNA for prothymosin alpha 286 0.0060 1 L47334 Human DNA from cosmid f23280 from chromosome 19q13... 291 0.0060 1 J02601 Yeast (S.cerevisiae) CAT repetitive element, clone... 240 0.0060 1 L04873 Mus musculus cystic fibrosis transmembrane regulat... 289 0.0060 1 D32209 Rat mRNA for leucine-rich acidic nuclear protein, ... 284 0.0065 1 Z82174 Human DNA sequence from cosmid B20F6 290 0.0065 1 Z54236 Caenorhabditis elegans cosmid C27B7 290 0.0066 1 X64615 O.berteriana chloroplast ORF80 (exon 1 and 2) and ... 288 0.0067 1 X53237 D. discoideum plasmid Ddp1 DNA with D-5, G-1 and D... 289 0.0067 1 AL010150 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 289 0.0068 1 U35655 Ovis aries centromere protein B (CENP-B) mRNA, par... 286 0.0069 1 AL008970 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 273 0.0069 2 U00691 Dictyostelium discoideum plasmid Ddp1 D2 orf, D1/D... 289 0.0072 1 U00796 Dictyostelium discoideum plasmid Ddp1 D2 ORF, D1 O... 289 0.0072 1 X66481 B.taurus mRNA for Na/Ca,K-exchanger 288 0.0072 1 U97329 Makaira nigricans ryanodine receptor RyR1 isoform ... 289 0.0072 1 AC004101 Mouse Cosmid ma53a016 from 14D1-D2, complete seq... 289 0.0074 1 U12825 Saccharomyces cerevisiae transcription factor TFII... 286 0.0075 1 AL010251 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 288 0.0075 1 Z11920 O.sativa gene for heat shock protein 82 HSP82 288 0.0075 1 L27590 Plasmodium chabaudi chabaudi erythrocyte membrane ... 285 0.0075 1 AF026132 Homo sapiens retinal rod Na+/Ca+, K+ exchanger (... 287 0.0078 1 X91791 E.typhina DNA for microsatellite marker (370 bp) 232 0.0079 1 D78589 Rana rugosa mRNA for calreticulin, complete cds. 286 0.0081 1 Z99753 S.pombe chromosome I cosmid c23C4. 288 0.0082 1 S41694 {pseudogene} PTMAP2=prothymosin alpha [human, Geno... 283 0.0082 1 L13236 Rattus norvegicus polymeric immunoglobulin recepto... 243 0.0084 1 Z28028;Y13137 S.cerevisiae chromosome XI reading frame OR... 286 0.0084 1 U00175 Dictyostelium mucoroides strain DMUC2 clone p287m1... 246 0.0087 2 X05182 P.falciparum FC27 Ag46 RESA mRNA for ring-infected... 283 0.0088 1 Z97348 Plasmodium falciparum DNA *** SEQUENCING IN PROGRE... 287 0.0089 1 Z93389 Caenorhabditis elegans cosmid T13F3 287 0.0090 1 Z75528 Caenorhabditis elegans cosmid C18B12A 258 0.0090 2 AC004001 Human BAC clone RG083J23 from 7q31, complete seq... 287 0.0091 1 Z74961;Y13140 S.cerevisiae chromosome XV reading frame OR... 285 0.0095 1 U00176 Dictyostelium mucoroides DMUC2 clone p288m2 G1-lik... 250 0.0096 2 L10986;L18807 C. elegans cosmid F10E9. 284 0.0096 2 M55017;M37081 Rat nucleolin gene. 279 0.0098 1 U51924 Human phosphatase 2A inhibitor I2PP2A mRNA, comple... 278 0.010 1 M69249 Mouse lipocortin I gene, upstream region and exon 1. 282 0.010 1 Z82186 Human DNA sequence from Fosmid 49D8 on chromosome ... 294 0.010 2 X71422 M.musculus Hoxd-11 gene 285 0.010 1 U60823 Human potent heat-stable protein phosphatase 2A in... 276 0.011 1 U09185 Buchnera aphidicola Soh B protease (soh B) gene, p... 285 0.011 1 X53616 C.domesticus calnexin (pp90) mRNA 284 0.011 1 U52064 Kaposi's sarcoma-associated herpes-like virus ORF7... 284 0.011 1 U67078 Xenopus laevis C2-HC type zinc finger protein X-My... 284 0.011 1 U90889 Mus musculus transketolase (TKT) gene, partial cds. 285 0.011 1 X79855 H.sapiens HTNT5A mRNA for cardiac troponin T 230 0.011 1 Z70678 S.cerevisiae chromosome XV DNA, 54.7 kb region 285 0.011 1 U61951 Caenorhabditis elegans cosmid C48A7. 274 0.011 2 AC002062 Sequence of BAC F20P5 from Arabidopsis thaliana ... 249 0.012 2 U81289 Pisum sativum NAP1Ps mRNA, complete cds. 281 0.012 1 X00461 Rat gene for alpha-lactalbumin 283 0.012 1 Z81053 Caenorhabditis elegans cosmid E02A10 284 0.012 1 A00661 P.falciparum RESA gene for ring-infected erythrocy... 283 0.012 1 AC003037 Homo sapiens Xp22 BAC GSHB 526D21 (Genome System... 284 0.013 1 U53863 Trypanosoma brucei nucleolar RNA binding protein N... 280 0.013 1 AL008980 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 283 0.014 1 U12858 Arabidopsis thaliana Col-0 nucleosome assembly pro... 279 0.014 1 Z20656 Homo sapiens of cardiac alpha-myosin heavy chain gene 283 0.014 1 Z81115 Caenorhabditis elegans cosmid T05D4 283 0.014 1 U41534 Caenorhabditis elegans cosmid C16A3. 283 0.014 1 X75090 H.sapiens mRNA for HLA-DR associated protein I (PH... 276 0.014 1 AF025684 Homo sapiens cerebellar leucine rich acidic nucl... 276 0.014 1 J02675 Rat prostatic spermine-binding protein (SBP) mRNA,... 278 0.014 1 S80994 MLC-2=myosin light chain 2 {promoter} [rats, Wista... 280 0.014 1 U26708 Rattus norvegicus cardiac myosin light chain 2 (ML... 280 0.014 1 Z49908 Caenorhabditis elegans cosmid C07E3 251 0.015 2 U41625 Caenorhabditis elegans cosmid K03A1. 282 0.015 1 Z49939;Z71257 S.cerevisiae chromosome XIII cosmid 9959. 282 0.015 1 AF019612 Homo sapiens S2P mRNA, complete cds. 279 0.015 1 U73477 Human acidic nuclear phosphoprotein pp32 mRNA, com... 276 0.016 1 U85970 Xenopus laevis middle molecular weight neurofilame... 280 0.016 1 U76758 Mus musculus erythroid ankyrin and two alternative... 269 0.016 1 Z28297;Y13137 S.cerevisiae chromosome XI reading frame OR... 279 0.017 1 A20359 ryanodine receptor 281 0.017 1 J05200 Human ryanodine receptor mRNA, complete cds. 281 0.017 1 Z70684 Caenorhabditis elegans cosmid F28D1 281 0.017 1 M58048 Chicken calsequestrin mRNA, 3' end. 276 0.017 1 AF038458;AD000823;AD000827 Homo sapiens DNA from chromoso... 281 0.017 1 U75698 Kaposi's sarcoma-associated herpesvirus long uniqu... 281 0.017 1 AC002480 Human BAC clone GS055K18 from 7p15-p21, complete... 281 0.017 1 L19249 Caenorhabditis elegans homeodomain protein mRNA, 3... 275 0.017 1 X02801 Mouse gene for glial fibrillary acidic protein (GFAP) 280 0.018 1 Y07570 H.sapiens mRNA for PHAPI2b protein 276 0.018 1 U88539 Mus musculus chromatin structural protein homolog ... 279 0.018 1 U01878 Saccharomyces cerevisiae SIS2 gene, complete cds. 279 0.019 1 X96469 X.laevis mRNA for C4SR protein 275 0.019 1 Z98880 Human DNA sequence from PAC 179P9 on chromosome 6q22. 246 0.019 4 D13222 Japanese quail genomic DNA for neurofilament-L (NF... 279 0.020 1 D13223 Japanese quail genomic DNA for neurofilament-L (NF... 279 0.020 1 L37092 Mus musculus cyclin-dependent kinase homologue (p1... 278 0.020 1 J02722;M12129 Rat heme oxygenase gene, complete cds. 279 0.020 1 X15378 Mouse gene for the light and heavy chains of myelo... 279 0.020 1 Y00500 Mouse glandular kallikrein gene 278 0.020 1 X79858 H.sapiens HTNT3 mRNA for cardiac troponin T 228 0.020 1 AC002561 Arabidopsis thaliana chromosome II BAC T24P15 ge... 279 0.021 1 X07265 Chicken mRNA for 90kDa heat shock protein 277 0.022 1 Y13936 Homo sapiens mRNA for protein phosphatase 2C gamma 276 0.022 1 Y15491 Pongo pygmaeus gene encoding fertilin alpha 277 0.022 1 AL010222 Plasmodium falciparum DNA *** SEQUENCING IN PROG... 215 0.022 2 AC000367 Human Cosmid g1862x055 from 7q31.3, complete seq... 288 0.022 2 U97128 Plasmodium falciparum HMG-like protein Pf16 (Pf16)... 275 0.022 1 M98452 Human calnexin mRNA, complete cds. 275 0.022 1 M33190 Rat cytochrome P450 II A3 (CYP2A3) gene, complete ... 278 0.023 1 U19361 Petromyzon marinus neurofilament subunit NF-180 mR... 277 0.023 1 M60897 Mouse Na,K-ATPase beta2 subunit (Atp1b2) promoter ... 273 0.023 1 Z70721 S.pombe chromosome I cosmid c12B10. 278 0.023 1 U53147 Caenorhabditis elegans cosmid C01B7. 278 0.023 1 Z72686;Y13135 S.cerevisiae chromosome VII reading frame O... 275 0.023 1 X16481 Rat mRNA for zinc(2+) binding protein 271 0.024 1 J04799 Human prothymosin-alpha pseudogene, complete seque... 274 0.024 1 U28067 Xenopus laevis neurogenic differentiation factor (... 273 0.025 1 L18887 Human calnexin mRNA, complete cds. 275 0.025 1 X67204 M.musculus DNA sequence of Sry locus 277 0.025 1 M86518 Plasmodium falciparum high mobility group-like pro... 271 0.025 1 WARNING: Descriptions of 940 database sequences were not reported due to the limiting value of parameter V = 500. >U51677 Human non-histone chromatin protein HMG1 (HMG1) gene, complete cds. Length = 2575 Plus Strand HSPs: Score = 12875 (1931.8 bits), Expect = 0.0, P = 0.0 Identities = 2575/2575 (100%), Positives = 2575/2575 (100%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGT 180 Query: 181 AATTAAAAGACAGTTTCCAATTGAGGATGCAAAAAAAAGCCTAGTTGGCATTCTCGTAGT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 AATTAAAAGACAGTTTCCAATTGAGGATGCAAAAAAAAGCCTAGTTGGCATTCTCGTAGT 240 Query: 241 GGGACGCTATTACATAGCAAAAGACATTGGTTTTGAGGATAATTTACTTAAATGTTACAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 GGGACGCTATTACATAGCAAAAGACATTGGTTTTGAGGATAATTTACTTAAATGTTACAA 300 Query: 301 CTTAAACTTACAAATTAATTATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 CTTAAACTTACAAATTAATTATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTG 360 Query: 361 AAGATATGGCAAAAGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 AAGATATGGCAAAAGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTC 420 Query: 421 CCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 CCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAG 480 Query: 481 TATCTTGCCTGTTTTTACTTCCCAGACACGTTTTACAGTAGAATCTGAGAGAAATTTAGC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 TATCTTGCCTGTTTTTACTTCCCAGACACGTTTTACAGTAGAATCTGAGAGAAATTTAGC 540 Query: 541 AAGCTACTTTGTCAGTTTAGAGTGTAAATGTACAATCAAAGTTTCTTAGCTAATACTTGT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 AAGCTACTTTGTCAGTTTAGAGTGTAAATGTACAATCAAAGTTTCTTAGCTAATACTTGT 600 Query: 601 TCATATTGGTTATATTTAAATAGTATAAAATTCCTGTTGGGTGGGAGTGTTCCCAGAGCA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 TCATATTGGTTATATTTAAATAGTATAAAATTCCTGTTGGGTGGGAGTGTTCCCAGAGCA 660 Query: 661 TTTGAATTAGACATTTGGTCTCCTTTGCCCAGTGTATCTCCTTTTGATCTTTTTATTTCT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 TTTGAATTAGACATTTGGTCTCCTTTGCCCAGTGTATCTCCTTTTGATCTTTTTATTTCT 720 Query: 721 TGAAAAATACTATCCCTTTGAAATAGTGTAATTGTAGAATGTTCATCTAGGGTTCTAGCT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 TGAAAAATACTATCCCTTTGAAATAGTGTAATTGTAGAATGTTCATCTAGGGTTCTAGCT 780 Query: 781 AGTATAAATTAAATAGTTGTAAATTAAGCTTTGGTTGTGAAGGATATTTAGTATATTATA 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 AGTATAAATTAAATAGTTGTAAATTAAGCTTTGGTTGTGAAGGATATTTAGTATATTATA 840 Query: 841 GTATTTGCACCCTGTCCAATGCATCACAGAAATTCACAGGCAGCTTTAAATAGCAATGCA 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 GTATTTGCACCCTGTCCAATGCATCACAGAAATTCACAGGCAGCTTTAAATAGCAATGCA 900 Query: 901 GTGTACACCTGATAGTATTTGTTTTTGTGATCTGTTAACTTAAAATCCTAAAATTAATTT 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 GTGTACACCTGATAGTATTTGTTTTTGTGATCTGTTAACTTAAAATCCTAAAATTAATTT 960 Query: 961 TTTTTTTAGTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGA 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 TTTTTTTAGTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGA 1020 Query: 1021 ACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACAC 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 ACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACAC 1080 Query: 1081 TGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 TGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGA 1140 Query: 1141 AAAGGTAAGAAGTGTGGGTTTGCTTGGTAAAATGATGACAAGTACGCCAGATGTATGATT 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 AAAGGTAAGAAGTGTGGGTTTGCTTGGTAAAATGATGACAAGTACGCCAGATGTATGATT 1200 Query: 1201 GTACTTAGTTTGAGGTGTAATAAGTTTTTAGGGTAACAGCTACATTAAGTATGGTGTTGA 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 GTACTTAGTTTGAGGTGTAATAAGTTTTTAGGGTAACAGCTACATTAAGTATGGTGTTGA 1260 Query: 1261 TATAAGTCCTCATCCTTCAAAGAATGCAGAGGACCAAATAAATTAGGGTTTTTTTGACTA 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 TATAAGTCCTCATCCTTCAAAGAATGCAGAGGACCAAATAAATTAGGGTTTTTTTGACTA 1320 Query: 1321 AAATGTAATCAGACTCAGACAAAGGCTGTGTACATTTATGTTGGTTTTGTTATTCCCCAG 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 AAATGTAATCAGACTCAGACAAAGGCTGTGTACATTTATGTTGGTTTTGTTATTCCCCAG 1380 Query: 1381 TATCTTGAAGTTCATGAAAATGTTGGTAGTCACTTCAAGTCAAAAATGAGCATTTTCAAA 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 TATCTTGAAGTTCATGAAAATGTTGGTAGTCACTTCAAGTCAAAAATGAGCATTTTCAAA 1440 Query: 1441 TGGCTTGGCATACAGTACAAAAACAGGCTAGACAAAGTAATATAGGCTATATTTTTCTTA 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1441 TGGCTTGGCATACAGTACAAAAACAGGCTAGACAAAGTAATATAGGCTATATTTTTCTTA 1500 Query: 1501 GTCATATCCTGAAACATTTATGTTCTTTTCCTTTAGATACTCAAAAAACCACAGCATCAC 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1501 GTCATATCCTGAAACATTTATGTTCTTTTCCTTTAGATACTCAAAAAACCACAGCATCAC 1560 Query: 1561 TAAGTTAAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAATAAGATTAAGGAAATCTAT 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1561 TAAGTTAAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAATAAGATTAAGGAAATCTAT 1620 Query: 1621 AACTCTTATAGTTCAGTAAATTGAAATATTAAATACTTAATTTTCAGCTTTAGTCATTCT 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1621 AACTCTTATAGTTCAGTAAATTGAAATATTAAATACTTAATTTTCAGCTTTAGTCATTCT 1680 Query: 1681 GAAAAGTGTTTATTTCTAGATGTTTCTTAACCTAATTGCATGTTTATTGACAAATTACCT 1740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 GAAAAGTGTTTATTTCTAGATGTTTCTTAACCTAATTGCATGTTTATTGACAAATTACCT 1740 Query: 1741 TTTTTTTTTAAGACCACATTTCCTACTAAGGATTAAGGTCTGACAGTGTAAACCTGTAGA 1800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1741 TTTTTTTTTAAGACCACATTTCCTACTAAGGATTAAGGTCTGACAGTGTAAACCTGTAGA 1800 Query: 1801 GTGCTTTTTTGCATTCAGAAGGTGGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCT 1860 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801 GTGCTTTTTTGCATTCAGAAGGTGGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCT 1860 Query: 1861 GGTTTTAATAGAGTTAGGATCTGGTAGATAATTGCACCTCAATGAGGCATAACTTTGCAA 1920 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1861 GGTTTTAATAGAGTTAGGATCTGGTAGATAATTGCACCTCAATGAGGCATAACTTTGCAA 1920 Query: 1921 ATATTAGACTATGCCATTTCATGAGTTATAGATTGTTATAATGATCTTGTATTTTTATGT 1980 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1921 ATATTAGACTATGCCATTTCATGAGTTATAGATTGTTATAATGATCTTGTATTTTTATGT 1980 Query: 1981 TCATTTATTGAAGTTCTAGTTATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATT 2040 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 TCATTTATTGAAGTTCTAGTTATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATT 2040 Query: 2041 TTGGTATAACTAGAATCTTGATTTCTTTCATAAAGTTCTGCCATGTTCTATTTCTTTCCT 2100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2041 TTGGTATAACTAGAATCTTGATTTCTTTCATAAAGTTCTGCCATGTTCTATTTCTTTCCT 2100 Query: 2101 TAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGGATATTGCTGCA 2160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2101 TAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGGATATTGCTGCA 2160 Query: 2161 TATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2161 TATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC 2220 Query: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCA 2340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCA 2340 Query: 2341 GTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAA 2400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2341 GTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAA 2400 Query: 2401 AGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTT 2460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2401 AGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTT 2460 Query: 2461 TTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTT 2520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2461 TTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTT 2520 Query: 2521 CAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAA 2575 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2521 CAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAA 2575 >X80457 M.musculus HMG1 gene Length = 2547 Plus Strand HSPs: Score = 2065 (309.8 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198 Identities = 449/482 (93%), Positives = 449/482 (93%), Strand = Plus / Plus Query: 2094 CTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCC-CT--TTGCTTTGGAAGGA 2150 CTTT T AA TTT TTT TT CT TGTT AT CTCC CT TTG TTTGGAAGGA Sbjct: 1944 CTTTG-TGAAGTTTTATTTTTTGTCTT-TGTTACATTCTCCTCTCCTTGTTTTGGAAGGA 2001 Query: 2151 TATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGC 2210 TATTGCTGC TA GAGCTAAAGGAAA CCTGATGCAGC AAAAAGGG GT GTCAAGGC Sbjct: 2002 TATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGGGTGGTCAAGGC 2061 Query: 2211 TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 TGAAAA AGCAAGAAAAAGAAGGAAGAGGA GA GA GAGGA GATGAAGAGGATGAGGA Sbjct: 2062 TGAAAAGAGCAAGAAAAAGAAGGAAGAGGAAGATGAGGAGGAGGATGAAGAGGATGAGGA 2121 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 GAGGAGGAAGA GA GAAGA GAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG Sbjct: 2122 AGAGGAGGAAGAAGAGGAAGACGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2181 Query: 2331 TTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCA 2390 TTCTAGCGCAGTTTTTTTTT CTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCA Sbjct: 2182 TTCTAGCGCAGTTTTTTTTT-CTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCA 2240 Query: 2391 CTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTAC 2450 CTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTAC Sbjct: 2241 CTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTAC 2300 Query: 2451 AGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTG 2510 AGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTG Sbjct: 2301 AGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTG 2360 Query: 2511 GTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCAT 2570 GTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGT TGGGGGTTGTAAATTGGCAT Sbjct: 2361 GTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTCTGGGGGTTGTAAATTGGCAT 2420 Query: 2571 GGAAA 2575 GGAAA Sbjct: 2421 GGAAA 2425 Score = 871 (130.7 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198 Identities = 337/480 (70%), Positives = 337/480 (70%), Strand = Plus / Plus Query: 797 TTGTAAATTAAGCTTTGGTTGTGAAGGATATTTAGTATATTATAGTATTTGCACCC-TGT 855 TTGTA TT AG T G T AA A ATTTAG AT TT T G AT TG A TGT Sbjct: 838 TTGTATCTTTAGAAATTGCTCAAAACTA-ATTTAGAATGTTTT-GCATCTGTATATATGT 895 Query: 856 CC-AATGCATCACAGAAATTCACAGGC-A-GCTTTAAATAGCA-ATGCAGTGTACACCTG 911 C AATG T ACA T C CA C A G T T AAT C A CA TG A A C G Sbjct: 896 CTGAATGTTT-ACACCC-TGCCCATACTATGGTATGAATTACTTAAACACTGCAGAGCAG 953 Query: 912 ATAGTATTTGTTTTTGTGATCTGTTAACTTAAAATCCTAAAATTA-ATTTTTT-TTTTAG 969 TA A GTT GTG T GTT TTAAAATCCTAAAA TA ATTT T TTTTAG Sbjct: 954 -TAC-AGA-GTTGA-GTGTTTAGTTTG-TTAAAATCCTAAAAGTACATTTCTGGTTTTAG 1008 Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 TTCGGCCTTCTTC T TTCTG TCTGAGTA CGCCC AAAATCAAAGG GA CATCCTGG Sbjct: 1009 TTCGGCCTTCTTCTTGTTCTGTTCTGAGTACCGCCCCAAAATCAAAGGCGAGCATCCTGG 1068 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 C T TCCATTGGTGATGTTGC AAGAAACT GGAGAGATGTGGAA AACACTGC GCAGA Sbjct: 1069 CTTATCCATTGGTGATGTTGCAAAGAAACTAGGAGAGATGTGGAACAACACTGCAGCAGA 1128 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGGTAAG 1149 TGACAAGCAGCC TATGA AAGAA GCTGC AAGCTGAAGGA AA TA GA AAGGTAAG Sbjct: 1129 TGACAAGCAGCCCTATGAGAAGAAAGCTGCCAAGCTGAAGGAGAAGTATGAGAAGGTAAG 1188 Query: 1150 AAGTGTG---GGTTTGCTTG-GTAAAATGATGACAAGTACGCCAGAT-GTATGATTGTA- 1203 AG TG GG T C G GT A GAT A A T G A T GT T ATT Sbjct: 1189 GAGGATGACAGGATACCCAGTGTTAGGGGATTATACTT--GATAACTCGTCTTATTTCCT 1246 Query: 1204 CTTAGTTTG-AGGTGTAATAAGTTTT--TAGGGTAACAGCTAC-ATTAAGTATGGTGTTG 1259 CTT GTTTG AGG T T GTTTT TA G AAC GC A A T GT GT TT Sbjct: 1247 CTTTGTTTGCAGGCTTCGTT-GTTTTCATACAGGAACGGCCAATAGTGTGTTCAGTTTTC 1305 Query: 1260 ATATAAGTCCTCAT 1273 TATAA TC T AT Sbjct: 1306 CTATAA-TC-TGAT 1317 Score = 771 (115.7 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198 Identities = 163/174 (93%), Positives = 163/174 (93%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 173 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCATTCTTTGTG 232 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 |||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 233 CAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAG 292 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAA 174 ||||| |||||||||||||||||||||||||||||||||||| | | ||||| | Sbjct: 293 TTTTCCAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTTAGAGATGCTGA 346 Score = 754 (113.1 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198 Identities = 228/293 (77%), Positives = 228/293 (77%), Strand = Plus / Plus Query: 250 TTAC-ATAGCAAAAG-ACATTGGTTTTGAGGATAATTTACTTAA-ATGTTACAACTTAAA 306 TTAC ATA A A A A TG TTT AGG T TA T AA AT T A T AA Sbjct: 392 TTACTATATGACTATTAAAGTGCTTT--AGGCTGGCATATTGAACATCTCT-ATGTCAAG 448 Query: 307 CTTACAAATTAATTATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATA 366 TTACAAAT AATT TTT TAGACCATGTCTGCTAAAGA AA GG AAATTTGAAGATA Sbjct: 449 TTTACAAAT-AATTCTTTC-TAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATA 506 Query: 367 TGGCAAAAGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAG 426 TGGCAAA GC GACAAGGC CGTTATGAAAGAGAAATGAAAACCTA ATCCC CCCAAAG Sbjct: 507 TGGCAAAGGCTGACAAGGCTCGTTATGAAAGAGAAATGAAAACCTACATCCCCCCCAAAG 566 Query: 427 GGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT--- 483 GGGAGAC AAAAAGAAGTTCAAGGA CCCAATGCACCCAAGAGGCCTCCGTGAGTAT Sbjct: 567 GGGAGACCAAAAAGAAGTTCAAGGACCCCAATGCACCCAAGAGGCCTCCGTGAGTATGAG 626 Query: 484 CTTGCCTGTTTTTACTTCCCAGACACGTTTTACAGTAGAATCTGAGAGAAATTTAGCAA 542 CTT G TTTTA TT AG GTTT A AGTAG T GA A ATT AGC A Sbjct: 627 CTTATGAGCTTTTATTTTG-AGTT--GTTT-AGAGTAGG-TAGGA-ATTGATTGAGCCA 679 Score = 715 (107.3 bits), Expect = 3.1e-117, Sum P(5) = 3.1e-117 Identities = 453/723 (62%), Positives = 453/723 (62%), Strand = Plus / Plus Query: 1545 AAAACCACAGCA-TCACTAAGTT-AAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAAT 1602 AAA AC G A T CTA GT AAATTA A T TG T C CT T A TAAA TAA Sbjct: 1451 AAAGTAACTGTACTGCCTATGTGCAAATTATTA-TATGTT-CACTTTGGATTAAAATAAA 1508 Query: 1603 AA-GATTAAGGA--AATCTATAACTCT-TATAGT-TCAGTA-AATTGA--AATATTAAAT 1654 A G TTAA AA CT T C TA A T TCA TA AAT GA AA ATT A Sbjct: 1509 ATTGCTTAAACTTTAAGCT-TGCCAAGGTA-ACTGTCATTAGAATGGAGGAAAATTGTA- 1565 Query: 1655 ACTTAATTTTCAGCT-TTAGTCATTCTGAAAAG-TGTTTATTTCTAGATGTTTCTTAACC 1712 A TT T T CA TTA AT C AAAAG T TT TTT T GA GT TT C Sbjct: 1566 A-TTCGTATACATAAATTAAA-ATACCTAAAAGCTAATT-TTTGTTGAGGTAATTTTTTC 1622 Query: 1713 T-AAT-TGCATGTTTATTGACAAATTACCTTTTTTTTTTAAGACCACATTTCCTACTAAG 1770 T AA TG T TTT TT A A A AC T CCA TTTC T CT G Sbjct: 1623 TGAAAATGTCTATTTTTTTAGATAC-ACACCCCCAACCTCCCCCCAGTTTTCTT-CTGTG 1680 Query: 1771 GATTAAGGTCTGACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGTGGCAGTG 1830 GATTAA TCTG C GTG AACCTGTAGA TGCT TTTTG TTCAGAAGGTGGCAGT Sbjct: 1681 GATTAAACTCTGGCTGTG--AACCTGTAGAATGCTGTTTTGTGTTCAGAAGGTGGCAGTA 1738 Query: 1831 TCTACCCTTTAATCAAAGTCTCTAC-ATTCTGGTTTTAATAGAGTTAGGATCTGGTAGAT 1889 T TAC CTTT ATCA T CT C A TC T A TAGA TTAGGAT TGGTA AT Sbjct: 1739 T-TACTCTTTGATCAGTCTGCCTTCTAGTCCTCATAAACTAGAATTAGGATGTGGTATAT 1797 Query: 1890 AATTGCACCTCAATGAGGCATAACTTTGCAAATATTAGACTATGCCATTTCATGAGTTAT 1949 AATTGCAC TCA TGAGGCATAAC CAAATATTAG CT G CATTTCATGAGTT T Sbjct: 1798 AATTGCACTTCAGTGAGGCATAACAACACAAATATTAGTCT--GACATTTCATGAGTTGT 1855 Query: 1950 AGATTGTTATAATGATCTTGTATTTTTATGTT-CATTTATTGAAGTT---CTAGTTATTT 2005 AGATTG A AAT T TT ATTTTTATGTT C TTT TT TT CTA TTATTT Sbjct: 1856 AGATTGC-A-AAT--TGTTC-ATTTTTATGTTGCCTTTTTTTCCCTTGGTCTAATTATTT 1910 Query: 2006 CTGGAGTTGCTGTGGATCTACAGATACGTG-ATATTTTGGTATAACTAGAATCTTGATTT 2064 G AG T C TGG CT T GTG A A TTTG T AA T AT TT T T Sbjct: 1911 GGGAAGGTACAATGGGCCTGTGTGTT-GTGGAGACTTTG-TG-AAGTTTTATTTTT-TGT 1966 Query: 2065 CTTTCATAAAGTTCTGCCATG-TTCTATTTCTTTCCTTAATCTTTTTTTCTTCCCTACTG 2123 CTTT TA A TTCT C T TT T TTT TA T T T C CTA G Sbjct: 1967 CTTTGTTACA-TTCTCCTCTCCTTGT-TTTGGAAGGATATTGCTGCCTACAGAGCTAAAG 2024 Query: 2124 TTTTATCCTCCCTTTGCTTT---GGAAG-GAT-ATTGCTGCATATCGAGCTA-AAGGA-A 2176 A CCT GC GG G G T A GCTG A A GAGC A AA A A Sbjct: 2025 GAAAA-CCTGATGCAGCGAAAAAGGGGGTGGTCAAGGCTGAAAA--GAGCAAGAAAAAGA 2081 Query: 2177 AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAA 2235 AG GA G AG A AGG G TG AGG TGA AA AG A GAA AAGA GGAA Sbjct: 2082 AGGAAGAGGAAGATGAGGAGGAGGATGAAGAGGATGAGGAAGAGGAGGAAGAAGA-GGAA 2140 Query: 2236 GAGGAGGAAGATGAGGAAGATGAAGAGGATGA 2267 GA GA GA GA GA GAAGATGA GA GATGA Sbjct: 2141 GACGAAGATGAAGAAGAAGATGATGATGATGA 2172 Score = 193 (29.0 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198 Identities = 101/154 (65%), Positives = 101/154 (65%), Strand = Plus / Plus Query: 581 GTTTCTTAGCTAATACTTGTTCATATTGGTTATATTTAAATAGT-A-TAAAATTCCTGTT 638 GTTTCTTAGCT A A T G T T G T TATTT A GT A T AA T G T Sbjct: 700 GTTTCTTAGCTGAGAATGGCTTGGGTCG-TG-TATTTGAGGGGTCAATGTAACTTAAGAT 757 Query: 639 GGGTGGGAGTGTTCCCAGAG-CATTTGAATT-AGACATTTGGTCTCCTTTGCCCAGTGTA 696 GGTGG A T TT AG CATTTGAA T AGA A T CTCCTTTGC CAGTGTA Sbjct: 758 AGGTGGTATTATTAGTGAAGGCATTTGAACTGAGAAACTCA--CTCCTTTGCACAGTGTA 815 Query: 697 TCTC--C---TTTTGAT-CTTTTTATTTCTTGAAAAAT 728 TC C C TTTTG T CTTTTT T TCTT A AAAT Sbjct: 816 TCACTACGATTTTTGGTTCTTTTTGTATCTTTAGAAAT 853 >X12597 Human mRNA for high mobility group-1 protein (HMG-1). Length = 1009 Plus Strand HSPs: Score = 2131 (319.7 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193 Identities = 429/431 (99%), Positives = 429/431 (99%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATAT GCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC Sbjct: 521 AAGGATATAGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 580 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT Sbjct: 581 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 640 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA Sbjct: 641 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 700 Query: 2326 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 2385 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA Sbjct: 701 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 760 Query: 2386 ACTCACTCC-TTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAA 2444 ACTCACTCC TTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAA Sbjct: 761 ACTCACTCCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAA 820 Query: 2445 CTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCT 2504 CTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCT Sbjct: 821 CTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCT 880 Query: 2505 GTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAAT 2564 GTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAAT Sbjct: 881 GTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAAT 940 Query: 2565 TGGCATGGAAA 2575 TGGCATGGAAA Sbjct: 941 TGGCATGGAAA 951 Score = 880 (132.0 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193 Identities = 176/176 (100%), Positives = 176/176 (100%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 408 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 468 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 524 Score = 754 (113.1 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193 Identities = 162/172 (94%), Positives = 162/172 (94%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG Sbjct: 197 TGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 256 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG Sbjct: 257 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 316 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 TTCAAGGATCCCAATGCACCCAAGAGGCCTCC T G T CTT CCT TT T Sbjct: 317 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTT-CCTCTTCT 368 Score = 750 (112.5 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193 Identities = 150/150 (100%), Positives = 150/150 (100%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 112 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 172 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 |||||||||||||||||||||||||||||| Sbjct: 173 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 202 >D63874 Human mRNA for HMG-1, complete cds. Length = 1194 Plus Strand HSPs: Score = 2123 (318.5 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191 Identities = 427/430 (99%), Positives = 427/430 (99%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 604 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 605 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGGTGAGGAAGATGAAGAGGAT 664 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 724 Query: 2326 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 2385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 784 Query: 2386 ACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAAC 2445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 ACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAAC 844 Query: 2446 TGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTG 2505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 845 TGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTG 904 Query: 2506 TCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATT 2565 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 905 TCCTGGTGGTATCTTCAATAGCCACTAACCCTGCCTGGTACAGTATGGGGGTTGTAAATT 964 Query: 2566 GGCATGGAAA 2575 |||||||||| Sbjct: 965 GGCATGGAAA 974 Score = 862 (129.3 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191 Identities = 174/176 (98%), Positives = 174/176 (98%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 432 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 492 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 493 TGACAAGCAGCCTTATGAAAAGAAGGCTGAAAAGCTGAAGGAAAAATACGAAAAGG 548 Score = 754 (113.1 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191 Identities = 162/172 (94%), Positives = 162/172 (94%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG Sbjct: 221 TGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 280 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG Sbjct: 281 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 340 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 TTCAAGGATCCCAATGCACCCAAGAGGCCTCC T G T CTT CCT TT T Sbjct: 341 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTT-CCTCTTCT 392 Score = 732 (109.8 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191 Identities = 148/150 (98%), Positives = 148/150 (98%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 77 ATGGGCAAAGGAGATCCTAAGAAGCCGAGACGGAAAATGTCATCATATGCATTTTTTGTG 136 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 196 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 |||||||||||||||||||||||||||||| Sbjct: 197 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 226 >L08048 Human non-histone chromosomal protein (HMG-1) retropseudogene. Length = 1814 Plus Strand HSPs: Score = 2045 (306.8 bits), Expect = 4.1e-188, Sum P(4) = 4.1e-188 Identities = 423/431 (98%), Positives = 423/431 (98%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATAT GCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC Sbjct: 1126 AAGGATATAGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 1185 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT Sbjct: 1186 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 1245 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGA---TGAAGAAGAAGATGATGATGATGAA 2322 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGA TGAAGAAGAAGATGATGATGATGAA Sbjct: 1246 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGAAGATGAAGAAGAAGATGATGATGATGAA 1305 Query: 2323 TAAGTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTAC 2382 TAAGTTGGTT TAGCGCAGTTTTTTTT CTTGTCTATAAAGCATTTAACCCCCCTGTAC Sbjct: 1306 TAAGTTGGTTGTAGCGCAGTTTTTTTT--CTTGTCTATAAAGCATTTAACCCCCCTGTAC 1363 Query: 2383 ACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTA 2442 ACAA TCACTC TTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTA Sbjct: 1364 ACAATTCACTCTTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTA 1423 Query: 2443 AACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCC 2502 AACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCC Sbjct: 1424 AACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCC 1483 Query: 2503 CTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAA 2562 CTGTCCTGGTGGTATTTTCAATAGCCACTAAC TTGCCTGGTACAGTATGGGGGTTGTAA Sbjct: 1484 CTGTCCTGGTGGTATTTTCAATAGCCACTAACTTTGCCTGGTACAGTATGGGGGTTGTAA 1543 Query: 2563 ATTGGCATGGAAA 2575 ATTGGCATGGAAA Sbjct: 1544 ATTGGCATGGAAA 1556 Score = 882 (132.3 bits), Expect = 4.1e-188, Sum P(4) = 4.1e-188 Identities = 178/180 (98%), Positives = 178/180 (98%), Strand = Plus / Plus Query: 966 TTAGTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATC 1025 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 950 TTCCTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATC 1009 Query: 1026 CTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTG 1085 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1010 CTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTG 1069 Query: 1086 CAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1070 CAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1129 Score = 741 (111.2 bits), Expect = 4.1e-188, Sum P(4) = 4.1e-188 Identities = 149/150 (99%), Positives = 149/150 (99%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 658 ATGGGCAAAGGAGATCCTAAGAAGCCGACAGGCAAAATGTCATCATATGCATTTTTTGTG 717 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 777 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 |||||||||||||||||||||||||||||| Sbjct: 778 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 807 Score = 736 (110.4 bits), Expect = 4.1e-188, Sum P(4) = 4.1e-188 Identities = 160/172 (93%), Positives = 160/172 (93%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAA GCGGACAAG Sbjct: 802 TGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAGGCGGACAAG 861 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG Sbjct: 862 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 921 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 TTCAAGGATCCCAATGCACCCAAGAGGC TCC T G T CTT CCT TT T Sbjct: 922 TTCAAGGATCCCAATGCACCCAAGAGGCTTCCTTCGGCCTTCTT-CCTCTTCT 973 >Z11997 M.musculus mRNA for non-histone chromosomal high-mobility group 1 Length = 2231 Plus Strand HSPs: Score = 1979 (296.9 bits), Expect = 4.1e-171, Sum P(4) = 4.1e-171 Identities = 415/435 (95%), Positives = 415/435 (95%), Strand = Plus / Plus Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGA 2199 T TG GAAGGATATTGCTGC TA GAGCTAAAGGAAA CCTGATGCAGC AAAAAGGG Sbjct: 535 TATGAGAAGGATATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGG 594 Query: 2200 GTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAA 2259 GT GTCAAGGCTGAAAA AGCAAGAAAAAGAAGGAAGAGGA GA GATGAGGA GATGAA Sbjct: 595 GTGGTCAAGGCTGAAAAGAGCAAGAAAAAGAAGGAAGAGGAAGATGATGAGGAGGATGAA 654 Query: 2260 GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGAT 2319 GAGGATGAGGA GAGGAGGAAGA GA GAAGA GAAGATGAAGAAGAAGATGATGATGAT Sbjct: 655 GAGGATGAGGAAGAGGAGGAAGAAGAGGAAGACGAAGATGAAGAAGAAGATGATGATGAT 714 Query: 2320 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTG 2379 GAATAAGTTG TTCTAGCGCAGTTTTTTTTT CTTGTCTATAAAGCATTTAACCCCCCTG Sbjct: 715 GAATAAGTTGATTCTAGCGCAGTTTTTTTTT-CTTGTCTATAAAGCATTTAACCCCCCTG 773 Query: 2380 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 2439 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT Sbjct: 774 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 833 Query: 2440 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATA 2499 TTAAACTGTACAGTGTCTTTTTTTG ATAGTTAACACACTACCGAATGTGTCTTTAGATA Sbjct: 834 TTAAACTGTACAGTGTCTTTTTTTGGATAGTTAACACACTACCGAATGTGTCTTTAGATA 893 Query: 2500 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTG 2559 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGT TGGGGGTTG Sbjct: 894 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTCTGGGGGTTG 953 Query: 2560 TAAATTGGCATGGAAA 2575 TAAATTGGCATGGAAA Sbjct: 954 TAAATTGGCATGGAAA 969 Score = 691 (103.7 bits), Expect = 4.1e-171, Sum P(4) = 4.1e-171 Identities = 155/176 (88%), Positives = 155/176 (88%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||||||||||||| | ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 369 TTCGGCCTTCTTCTTGTTCTGTTCTGAGTACCGCCCCAAAATCAAAGGCGAGCATCCTGG 428 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 | | ||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 429 CTTATCCATTGGTGATGTTGCAAAGAAACTAGGAGAGATGTGGAACAACACTGCAGCAGA 488 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||| ||||| ||||| ||||| ||||||||||| || || || |||| Sbjct: 489 TGACAAGCAGCCCTATGAGAAGAAAGCTGCCAAGCTGAAGGAGAAGTATGAGAAGG 544 Score = 688 (103.2 bits), Expect = 4.1e-171, Sum P(4) = 4.1e-171 Identities = 156/176 (88%), Positives = 156/176 (88%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTC TCATATGCATT TTTGTG Sbjct: 73 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCATTCTTTGTG 132 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAACTTG CGGGAGGAGCA AAGAAGAAGCACCC GATGCTTC GTCAACTTCTCAGAG Sbjct: 133 CAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAG 192 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 TTTTC AAGAAGTGCTCAGAGAGGTGGAAG A G GCT AA AA A G AA Sbjct: 193 TTTTCCAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAAAAGGGGAA 248 Score = 665 (99.8 bits), Expect = 4.1e-171, Sum P(4) = 4.1e-171 Identities = 155/177 (87%), Positives = 155/177 (87%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGA AA GG AAATTTGAAGATATGGCAAA GC GACAAG Sbjct: 217 TGGAAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATATGGCAAAGGCTGACAAG 276 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GC CGTTATGAAAGAGAAATGAAAACCTA ATCCC CCCAAAGGGGAGAC AAAAAGAAG Sbjct: 277 GCTCGTTATGAAAGAGAAATGAAAACCTACATCCCCCCCAAAGGGGAGACCAAAAAGAAG 336 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT-TACT 499 TTCAAGGA CCCAATGCACCCAAGAGGCCTCC T G T CTT C TGTT T T CT Sbjct: 337 TTCAAGGACCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTT-CTTGTTCTGTTCT 393 >U00431 Mus musculus HMG-1 mRNA, complete cds. Length = 1308 Plus Strand HSPs: Score = 1982 (297.4 bits), Expect = 1.3e-170, Sum P(4) = 1.3e-170 Identities = 416/435 (95%), Positives = 416/435 (95%), Strand = Plus / Plus Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGA 2199 T TG GAAGGATATTGCTGC TA GAGCTAAAGGAAA CCTGATGCAGC AAAAAGGG Sbjct: 608 TATGAGAAGGATATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGG 667 Query: 2200 GTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAA 2259 GT GTCAAGGCTGAAAA AGCAAGAAAAAGAAGGAAGAGGA GA GATGAGGA GATGAA Sbjct: 668 GTGGTCAAGGCTGAAAAGAGCAAGAAAAAGAAGGAAGAGGAAGATGATGAGGAGGATGAA 727 Query: 2260 GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGAT 2319 GAGGATGAGGA GAGGAGGAAGA GA GAAGA GAAGATGAAGAAGAAGATGATGATGAT Sbjct: 728 GAGGATGAGGAAGAGGAGGAAGAAGAGGAAGACGAAGATGAAGAAGAAGATGATGATGAT 787 Query: 2320 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTG 2379 GAATAAGTTGGTTCTAGCGCAGTTTTTTTT CTTGTCTATAAAGCATTTAACCCCCCTG Sbjct: 788 GAATAAGTTGGTTCTAGCGCAGTTTTTTTT--CTTGTCTATAAAGCATTTAACCCCCCTG 845 Query: 2380 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 2439 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT Sbjct: 846 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 905 Query: 2440 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATA 2499 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATA Sbjct: 906 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATA 965 Query: 2500 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTG 2559 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGT TGGGGGTTG Sbjct: 966 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTCTGGGGGTTG 1025 Query: 2560 TAAATTGGCATGGAAA 2575 TAAATTGGCATGGAAA Sbjct: 1026 TAAATTGGCATGGAAA 1041 Score = 691 (103.7 bits), Expect = 1.3e-170, Sum P(4) = 1.3e-170 Identities = 155/176 (88%), Positives = 155/176 (88%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||||||||||||| | ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 442 TTCGGCCTTCTTCTTGTTCTGTTCTGAGTACCGCCCCAAAATCAAAGGCGAGCATCCTGG 501 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 | | ||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 502 CTTATCCATTGGTGATGTTGCAAAGAAACTAGGAGAGATGTGGAACAACACTGCAGCAGA 561 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||| ||||| ||||| ||||| ||||||||||| || || || |||| Sbjct: 562 TGACAAGCAGCCCTATGAGAAGAAAGCTGCCAAGCTGAAGGAGAAGTATGAGAAGG 617 Score = 679 (101.9 bits), Expect = 1.3e-170, Sum P(4) = 1.3e-170 Identities = 155/176 (88%), Positives = 155/176 (88%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTC TCATATGCATT TTTGTG Sbjct: 146 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCATTCTTTGTG 205 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAACTTG CGGGAGGAGCA AAGAAGAAGCACCC GATGCTTC GTCAACTTCTCAGAG Sbjct: 206 CAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAG 265 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 TT TC AAGAAGTGCTCAGAGAGGTGGAAG A G GCT AA AA A G AA Sbjct: 266 TTCTCCAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAAAAGGGGAA 321 Score = 665 (99.8 bits), Expect = 1.3e-170, Sum P(4) = 1.3e-170 Identities = 155/177 (87%), Positives = 155/177 (87%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGA AA GG AAATTTGAAGATATGGCAAA GC GACAAG Sbjct: 290 TGGAAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATATGGCAAAGGCTGACAAG 349 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GC CGTTATGAAAGAGAAATGAAAACCTA ATCCC CCCAAAGGGGAGAC AAAAAGAAG Sbjct: 350 GCTCGTTATGAAAGAGAAATGAAAACCTACATCCCCCCCAAAGGGGAGACCAAAAAGAAG 409 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT-TACT 499 TTCAAGGA CCCAATGCACCCAAGAGGCCTCC T G T CTT C TGTT T T CT Sbjct: 410 TTCAAGGACCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTT-CTTGTTCTGTTCT 466 >L38477 Mus musculus (clone Clebp-1) high mobility group 1 protein (HMG-1) Length = 1225 Plus Strand HSPs: Score = 1973 (296.0 bits), Expect = 3.5e-170, Sum P(4) = 3.5e-170 Identities = 415/435 (95%), Positives = 415/435 (95%), Strand = Plus / Plus Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGA 2199 T TG GAAGGATATTGCTGC TA GAGCTAAAGGAAA CCTGATGCAGC AAAAAGGG Sbjct: 536 TATGAGAAGGATATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGG 595 Query: 2200 GTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAA 2259 GT GTCAAGGCTG AAA AGCAAGAAAAAGAAGGAAGAGGA GA GATGAGGA GATGAA Sbjct: 596 GTGGTCAAGGCTGTAAAGAGCAAGAAAAAGAAGGAAGAGGAAGATGATGAGGAGGATGAA 655 Query: 2260 GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGAT 2319 GAGGATGAGGA GAGGAGGAAGA GA GAAGA GAAGATGAAGAAGAAGATGATGATGAT Sbjct: 656 GAGGATGAGGAAGAGGAGGAAGAAGAGGAAGACGAAGATGAAGAAGAAGATGATGATGAT 715 Query: 2320 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTG 2379 GAATAAGTTGGTTCTAGCGCAGTTTTTTTT CTTGTCTATAAAGCATTTAACCCCCCTG Sbjct: 716 GAATAAGTTGGTTCTAGCGCAGTTTTTTTT--CTTGTCTATAAAGCATTTAACCCCCCTG 773 Query: 2380 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 2439 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT Sbjct: 774 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 833 Query: 2440 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATA 2499 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATA Sbjct: 834 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATA 893 Query: 2500 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTG 2559 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGT TGGGGGTTG Sbjct: 894 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTCTGGGGGTTG 953 Query: 2560 TAAATTGGCATGGAAA 2575 TAAATTGGCATGGAAA Sbjct: 954 TAAATTGGCATGGAAA 969 Score = 691 (103.7 bits), Expect = 3.5e-170, Sum P(4) = 3.5e-170 Identities = 155/176 (88%), Positives = 155/176 (88%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||||||||||||| | ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 370 TTCGGCCTTCTTCTTGTTCTGTTCTGAGTACCGCCCCAAAATCAAAGGCGAGCATCCTGG 429 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 | | ||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 430 CTTATCCATTGGTGATGTTGCAAAGAAACTAGGAGAGATGTGGAACAACACTGCAGCAGA 489 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||| ||||| ||||| ||||| ||||||||||| || || || |||| Sbjct: 490 TGACAAGCAGCCCTATGAGAAGAAAGCTGCCAAGCTGAAGGAGAAGTATGAGAAGG 545 Score = 679 (101.9 bits), Expect = 3.5e-170, Sum P(4) = 3.5e-170 Identities = 155/176 (88%), Positives = 155/176 (88%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTC TCATATGCATT TTTGTG Sbjct: 74 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCATTCTTTGTG 133 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAACTTG CGGGAGGAGCA AAGAAGAAGCACCC GATGCTTC GTCAACTTCTCAGAG Sbjct: 134 CAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAG 193 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 TT TC AAGAAGTGCTCAGAGAGGTGGAAG A G GCT AA AA A G AA Sbjct: 194 TTCTCCAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAAAAGGGGAA 249 Score = 665 (99.8 bits), Expect = 3.5e-170, Sum P(4) = 3.5e-170 Identities = 155/177 (87%), Positives = 155/177 (87%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGA AA GG AAATTTGAAGATATGGCAAA GC GACAAG Sbjct: 218 TGGAAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATATGGCAAAGGCTGACAAG 277 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GC CGTTATGAAAGAGAAATGAAAACCTA ATCCC CCCAAAGGGGAGAC AAAAAGAAG Sbjct: 278 GCTCGTTATGAAAGAGAAATGAAAACCTACATCCCCCCCAAAGGGGAGACCAAAAAGAAG 337 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT-TACT 499 TTCAAGGA CCCAATGCACCCAAGAGGCCTCC T G T CTT C TGTT T T CT Sbjct: 338 TTCAAGGACCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTT-CTTGTTCTGTTCT 394 >M64986 Rat amphoterin mRNA, complete cds. Length = 1225 Plus Strand HSPs: Score = 1952 (292.9 bits), Expect = 1.2e-169, Sum P(4) = 1.2e-169 Identities = 412/435 (94%), Positives = 412/435 (94%), Strand = Plus / Plus Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGA 2199 T TG GAAGGATATTGCTGC TA GAGCTAAAGGAAA CCTGATGCAGC AAAAAGGG Sbjct: 585 TATGAGAAGGATATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGG 644 Query: 2200 GTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAA 2259 GT GTCAAGGCTGA AA AGCAAGAAAAAGAAGGAAGAGGA GA GA GAGGA GATGAA Sbjct: 645 GTGGTCAAGGCTGAGAAGAGCAAGAAAAAGAAGGAAGAGGAAGACGACGAGGAGGATGAA 704 Query: 2260 GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGAT 2319 GAGGATGAGGA GAGGAGGAAGA GA GAAGA GAAGATGAAGAAGAAGATGATGATGAT Sbjct: 705 GAGGATGAGGAAGAGGAGGAAGAAGAGGAAGACGAAGATGAAGAAGAAGATGATGATGAT 764 Query: 2320 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTG 2379 GAATAAGTTGGTTCTA CGCA TTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTG Sbjct: 765 GAATAAGTTGGTTCTA-CGCATGTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTG 823 Query: 2380 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 2439 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT Sbjct: 824 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 883 Query: 2440 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATA 2499 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAG TA Sbjct: 884 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGCTA 943 Query: 2500 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTG 2559 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGT TGGGGGTTG Sbjct: 944 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTCTGGGGGTTG 1003 Query: 2560 TAAATTGGCATGGAAA 2575 TAAATTGGCATGGAAA Sbjct: 1004 TAAATTGGCATGGAAA 1019 Score = 718 (107.7 bits), Expect = 1.2e-169, Sum P(4) = 1.2e-169 Identities = 158/176 (89%), Positives = 158/176 (89%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||||||||||||| | ||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 419 TTCGGCCTTCTTCTTGTTCTGTTCTGAGTACCGCCCAAAAATCAAAGGCGAGCATCCTGG 478 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 | | |||||||||||||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 479 CTTATCCATTGGTGATGTTGCGAAGAAACTAGGAGAGATGTGGAACAACACTGCTGCGGA 538 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||| |||||||||||||| || ||||||||||| || || || |||| Sbjct: 539 TGACAAGCAGCCCTATGAAAAGAAGGCCGCCAAGCTGAAGGAGAAGTATGAGAAGG 594 Score = 670 (100.5 bits), Expect = 1.2e-169, Sum P(4) = 1.2e-169 Identities = 154/176 (87%), Positives = 154/176 (87%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTC TCATATGCATT TTTGTG Sbjct: 123 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCATTCTTTGTG 182 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAAC TG CGGGAGGAGCA AAGAAGAAGCACCC GATGCTTC GTCAACTTCTCAGAG Sbjct: 183 CAAACCTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAG 242 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 TT TC AAGAAGTGCTCAGAGAGGTGGAAG A G GCT AA AA A G AA Sbjct: 243 TTCTCCAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAAAAGGGGAA 298 Score = 656 (98.4 bits), Expect = 1.2e-169, Sum P(4) = 1.2e-169 Identities = 154/177 (87%), Positives = 154/177 (87%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGA AA GG AAATTTGAAGATATGGCAAA GC GACAAG Sbjct: 267 TGGAAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATATGGCAAAGGCTGACAAG 326 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GC CGTTATGAAAGAGAAATGAAAACCTA ATCCC CCCAAAGGGGAGAC AAAAAGAAG Sbjct: 327 GCTCGTTATGAAAGAGAAATGAAAACCTACATCCCCCCCAAAGGGGAGACCAAAAAGAAG 386 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT-TACT 499 TTCAAGGA CCCAATGC CCCAAGAGGCCTCC T G T CTT C TGTT T T CT Sbjct: 387 TTCAAGGACCCCAATGCCCCCAAGAGGCCTCCTTCGGCCTTCTT-CTTGTTCTGTTCT 443 >AF009343 Mus musculus HMG-like protein (Trf) mRNA, complete cds. Length = 1328 Plus Strand HSPs: Score = 1934 (290.2 bits), Expect = 1.5e-164, Sum P(4) = 1.5e-164 Identities = 410/435 (94%), Positives = 410/435 (94%), Strand = Plus / Plus Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGA 2199 T TG GAAGGATATTGCTGC TA GAGCTAAAGGAAA CCTGATGCAGC AAAAAGGG Sbjct: 595 TATGAGAAGGATATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGG 654 Query: 2200 GTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAA 2259 GT GTCAAGGCTGAAAA AGCAAGAAAAAGAAGGAAGAGGA GA GATGAGGA GATGAA Sbjct: 655 GTGGTCAAGGCTGAAAAGAGCAAGAAAAAGAAGGAAGAGGAAGATGATGAGGAGGATGAA 714 Query: 2260 GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGAT 2319 GAGGATGAGGA GAGGAGGAAGA GA GAAGA GAAGATGAAGAAGAAGATGATGATGAT Sbjct: 715 GAGGATGAGGAAGAGGAGGAAGAAGAGGAAGACGAAGATGAAGAAGAAGATGATGATGAT 774 Query: 2320 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTG 2379 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTT CTT TCT TAAAGCATTTAACCCCCCT Sbjct: 775 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTT-CTTATCTTTAAAGCATTTAACCCCCCTC 833 Query: 2380 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 2439 T CAC CTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT Sbjct: 834 TTCACTTCTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 893 Query: 2440 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATA 2499 TTAAACTGTACAGTGTCTTTTT TGTATAGTTAACACACTACCGAATGTGTCTTTAGATA Sbjct: 894 TTAAACTGTACAGTGTCTTTTTCTGTATAGTTAACACACTACCGAATGTGTCTTTAGATA 953 Query: 2500 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTG 2559 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGT TGGGGGTTG Sbjct: 954 GCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTCTGGGGGTTG 1013 Query: 2560 TAAATTGGCATGGAAA 2575 TAAATTGGCATGGAAA Sbjct: 1014 TAAATTGGCATGGAAA 1029 Score = 673 (101.0 bits), Expect = 1.5e-164, Sum P(4) = 1.5e-164 Identities = 153/176 (86%), Positives = 153/176 (86%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||||||||||||| | ||||| |||||||| ||||| ||||||||||| || |||||| | Sbjct: 429 TTCGGCCTTCTTCTTGTTCTGTTCTGAGTACCGCCCCAAAATCAAAGGCGAGCATCCTCG 488 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 | | |||||||||||| |||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 489 CTTATCCATTGGTGATCTTGCAAAGAAACTAGGAGAGATGTGGAACAACACTGCAGCAGA 548 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||| ||||| ||||| ||||| ||||||||||| || || || |||| Sbjct: 549 TGACAAGCAGCCCTATGAGAAGAAAGCTGCCAAGCTGAAGGAGAAGTATGAGAAGG 604 Score = 658 (98.7 bits), Expect = 1.5e-164, Sum P(4) = 1.5e-164 Identities = 154/174 (88%), Positives = 154/174 (88%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGGCAAAGGAGATCCTAAGAAGCCGAGA CAAAATGTC TCATATGCATT TTTGTG Sbjct: 137 ATGGGCAAAGGAGATCCTAAGAAGCCGAGA--CAAAATGTCCTCATATGCATTCTTTGTG 194 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAACTTG CGGGAGGAGCA AAGAAGAAGCACCC GATGCTTC GTCAACTTCTCAGAG Sbjct: 195 CAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAG 254 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 TTTTC AAGAAGTGCTCAGAGAGGTGGAAG A G GCT AA AA A G AA Sbjct: 255 TTTTCCAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAAAAGGGGAA 310 Score = 617 (92.6 bits), Expect = 1.5e-164, Sum P(4) = 1.5e-164 Identities = 151/176 (85%), Positives = 151/176 (85%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGA AA GG AAATTTGAAGATATGGCAAA GC GACAAG Sbjct: 279 TGGAAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATATGGCAAAGGCTGACAAG 338 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GC CGTTATG AAGAGAAATGAAAACCTA A CCC CCCAAAGG AGAC AAAAAGAAG Sbjct: 339 GCTCGTTATGGAAGAGAAATGAAAACCTACACCCCCCCCAAAGG--AGACCAAAAAGAAG 396 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT-TACT 499 TTCAAGGA CCCAATGCACCCAAGAGGCCTCC T G T CTT C TGTT T T CT Sbjct: 397 TTCAAGGACCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTT-CTTGTTCTGTTCT 453 >Z95115 Human DNA sequence from BAC 445C9 on chromosome 22q12.1. Length = 131,398 Plus Strand HSPs: Score = 1565 (234.8 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151 Identities = 337/360 (93%), Positives = 337/360 (93%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAG-AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AA GC AAAAAG AAG AA AG AGGAAGA GAGGAAGATGA GA GATGA GAGGA Sbjct: 58522 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 58581 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCT 2334 GAGGA GA GAAGA GA GAAGATGAAGA GAAGA A GATGATGAATAAGTTGGTTCT Sbjct: 58582 GAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGA--A-GATGATGAATAAGTTGGTTCT 58638 Query: 2335 AGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCC 2394 AGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCC Sbjct: 58639 AGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCC 58698 Query: 2395 TTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTG 2454 TTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTG Sbjct: 58699 TTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTG 58758 Query: 2455 TCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGG 2514 TCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTG TGG Sbjct: 58759 TCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGATGG 58818 Query: 2515 TATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAA 2574 TATTTTCAATAGCC CTAACCTTGCCTGGTACAGTATGGGGG TGTAAATTGGCATGGAA Sbjct: 58819 TATTTTCAATAGCCGCTAACCTTGCCTGGTACAGTATGGGGGCTGTAAATTGGCATGGAA 58878 Query: 2575 A 2575 A Sbjct: 58879 A 58879 Score = 853 (128.0 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151 Identities = 173/176 (98%), Positives = 173/176 (98%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 58290 TTCGGCCTTCTTCCTGTTCTGCTCTGCGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 58349 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 58350 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCCGCAGA 58409 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58410 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 58465 Score = 785 (117.8 bits), Expect = 2.6e-104, Sum P(4) = 2.6e-104 Identities = 167/175 (95%), Positives = 167/175 (95%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC Sbjct: 58462 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 58521 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT Sbjct: 58522 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 58581 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 GAGGAGGAGGA A GATGAAGAAGATGAAGATGAAGAAGA GATGA A G TG Sbjct: 58582 GAGGAGGAGGA--A-GATGAAGAAGATGAAGATGAAGAAGATGATGAATAAGTTG 58633 Score = 718 (107.7 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151 Identities = 158/172 (91%), Positives = 158/172 (91%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAA GCGGACAAG Sbjct: 58138 TGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAGGCGGACAAG 58197 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GCCC TTA GAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG Sbjct: 58198 GCCCATTACGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 58257 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 TTCAAGGATCC AATGCACCCAAGAGG CTCC T G T CTT CCTGTT T Sbjct: 58258 TTCAAGGATCCGAATGCACCCAAGAGGACTCCTTCGGCCTTCTT-CCTGTTCT 58309 Score = 696 (104.4 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151 Identities = 144/150 (96%), Positives = 144/150 (96%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| | Sbjct: 57994 ATGAGCAAAGGAGATCCTAAGAAGCTGAGAGGCAAAATGTCATCACATGCATTTTTTGGG 58053 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58054 CAAACTTGTCGGGAGGCGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACCTCTCAGAG 58113 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 |||||||||||||||||||||||||||||| Sbjct: 58114 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 58143 Score = 243 (36.5 bits), Expect = 3.8e-80, Sum P(4) = 3.8e-80 Identities = 79/110 (71%), Positives = 79/110 (71%), Strand = Plus / Plus Query: 2217 AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGA-GGAGGAGG 2275 A GCA G AAAA AAGG AG G A G TGA AA A AAGA A GA GGA GAGG Sbjct: 58499 ATGCA-GCAAAA-AAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGG 58555 Query: 2276 AGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGGAAGATGA GAAGATGAAGA GA GA GA GA GA GATGA GAA A G Sbjct: 58556 AGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAAGATGAAGAAGATG 58606 Score = 230 (34.5 bits), Expect = 1.4e-79, Sum P(4) = 1.4e-79 Identities = 100/149 (67%), Positives = 100/149 (67%), Strand = Plus / Plus Query: 2163 TCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGG-GAGTTGTCAAGGCTGAAAAAAGCA 2221 T GAG AAG AAAG GA G A A AAAGG GAG AAG C AAAAAG A Sbjct: 113428 TGGAGAAGAAGAAAAGGGAGA-GTAAATAGAAAGGAGAGAAAATAAGCCAAGAAAAAGGA 113486 Query: 2222 AGAAAAAGAAG-GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 GA AAAGA G G GAGGAG AAGA G G AAGA GAAGAGGA GAGGAG AG AGGA Sbjct: 113487 GGAGAAAGAGGTGCGGAGGAGTAAGAGGTGAAAGAGGAAGAGGAGGAGGAGAAGAAGGAG 113546 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATG 2311 GA GA G G GAAG GAAG A AAGA G Sbjct: 113547 GAGGA-G--G--GAAG--GAAGGA-AAGAAG 113569 Score = 223 (33.5 bits), Expect = 7.5, P = 1.0 Identities = 105/147 (71%), Positives = 105/147 (71%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTG-AAAAAAGCAAGAAAAA 2228 AAAG AAAG A G A AAA AAG AG G AAGG G AAAAAAG AAGAAAAA Sbjct: 45934 AAAGAAAAGGAAAAAGAAAGAAAGAAGAAAG--G--AAGGAAGGAAAAAAGGAAGAAAAA 45989 Query: 2229 GAAGGAAGAGGA-GGAAGATGAGGAAGATGAA-GAGGATGAG-GAGGAG-GAGGAAGATG 2284 GAAG AA AG A GGAAG GAG AAGA AA GAG A GAG GA GA GAG AAGA Sbjct: 45990 GAAGAAA-AGCAAGGAAG--GAGAAAGAAAAAAGAGAAAGAGAGAAGAAAGAGAAAGAAA 46046 Query: 2285 AAGAAGATGAAG-ATG-AAG-AAG-AAGATGATGA 2315 AAG A A GAAG A G AAG AAG AAG T AT A Sbjct: 46047 AAGGA-AGGAAGGAAGCAAGCAAGCAAGCTCATCA 46080 Score = 178 (26.7 bits), Expect = 3.0e-77, Sum P(4) = 3.0e-77 Identities = 64/88 (72%), Positives = 64/88 (72%), Strand = Plus / Plus Query: 2056 TCTTGATTTCTTTCATAAAGTTCTGCCATGTTCTATTTCTTTCCTTAATCTTTTTTTCTT 2115 TCTT TTTCTTTC T TTCT C T TTCT TTTCTTTCCTT TCTTT TTTCTT Sbjct: 124961 TCTTTCTTTCTTTCTTTCT-TTCTTTC-T-TTCTCTTTCTTTCCTTT-TCTTTCTTTCTT 125016 Query: 2116 CCCTACTGTTTTATC-CTCCCTTTGCTTT 2143 CCT CT T T TC CT CTTT CTTT Sbjct: 125017 TCCTTCTTTCAT-TCTCTGTCTTT-CTTT 125043 Score = 164 (24.6 bits), Expect = 1.2e-76, Sum P(4) = 1.2e-76 Identities = 106/179 (59%), Positives = 106/179 (59%), Strand = Plus / Plus Query: 1965 TCTTGTATTTTTATGTTCATTTATTGAAGTTCTAGTTATTTCTGGAGTTGCTGTGGATCT 2024 TC T T TTT T T TT TTT TT TTCT TT TTTCT TT CT T TCT Sbjct: 124824 TCCTTTCTTTCTTTCTTTCTTTCTTTCT-TTCT--TTCTTTCTTTCTTT-CTTTCTTTCT 124879 Query: 2025 ACAGATACGTGATATTTTGGTATAACTAGAAT-CTTGATTTCTTTCA-TAAAGTTCTGCC 2082 T C T T TTT T T CT T C T TTTCTTT T TTCT C Sbjct: 124880 TTCTTT-CTTTCTTTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTTTCTTTCTTTCTTTC 124938 Query: 2083 ATGTTCTATTTCTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTT 2142 T TTCT TTTCTTTCCTT TCTTT TTTCTT C T CT T TT TC T C TT CTT Sbjct: 124939 -T-TTCTCTTTCTTTCCTTT-TCTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCTCTT 124994 Query: 2143 T 2143 T Sbjct: 124995 T 124995 Score = 161 (24.2 bits), Expect = 1.7e-76, Sum P(4) = 1.7e-76 Identities = 93/139 (66%), Positives = 93/139 (66%), Strand = Plus / Plus Query: 2175 AAAGCCTGATGCAG-CAAAAAAGGGAGTTGTCAAGGCTGAAA-AAAGCAA-GAAA-AAGA 2230 A AGC GA C G CAAAAAA A AAGG GAAA AAAG AA GAAA AA A Sbjct: 67401 AGAGCAAGACTCTGTCAAAAAAAAAAAAAAAAAAGGAAGAAAGAAAGAAAAGAAAGAAAA 67460 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGAT-GAAGAGGATGAGGAGGAGGAG-GAA-GAT-GAA 2286 AG AAGA AG AAGA AG AAGA GAA AG A GA AG A GA GAA GA GAA Sbjct: 67461 AGAAAGAA-AGAAAGAA-AGAAAGAAAGAA-AGAAAGAA-AGAAAGAAAGAAAGACAGAA 67516 Query: 2287 -GAAGATGAAGAT-GAAGAAGAAGA 2309 GAA A AAGA GAAG A AAGA Sbjct: 67517 AGAA-AGAAAGAAAGAAGGA-AAGA 67539 >M21683;M21684 Pig nonhistone protein HMG1 mRNA, complete cds. Length = 2192 Plus Strand HSPs: Score = 2009 (301.4 bits), Expect = 1.3e-148, Sum P(3) = 1.3e-148 Identities = 419/431 (97%), Positives = 419/431 (97%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATATTGCTGCATA CGAGCTAAAGG AAGCCTGATGCAGCAAAAAAGGGAGT GTC Sbjct: 477 AAGGATATTGCTGCATACCGAGCTAAAGGGAAGCCTGATGCAGCAAAAAAGGGAGTCGTC 536 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AAGGCTGA AAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT Sbjct: 537 AAGGCTGAGAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 596 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GAGGAGGAGGAGGA GA GAAGA GATGA GA GAAGAAGAAGATGATGATGATGAATAA Sbjct: 597 GAGGAGGAGGAGGAGGACGAAGAGGATGAGGAGGAAGAAGAAGATGATGATGATGAATAA 656 Query: 2326 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCC-TGTACAC 2384 GTTGGTTCTAGCGCAGTTTTTTTTT CTTGTCTATAAAGCATTTAACCCCCC TGTACAC Sbjct: 657 GTTGGTTCTAGCGCAGTTTTTTTTT-CTTGTCTATAAAGCATTTAACCCCCCCTGTACAC 715 Query: 2385 AACTCACTCCTTTTAAAGAAAAAAA-TTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAA 2443 AACTCACTCCTTTTAAAGAAAAAAA TTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAA Sbjct: 716 AACTCACTCCTTTTAAAGAAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAA 775 Query: 2444 ACTGTACAGTGTCTTTTTTT-GTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCC 2502 ACTGTACAGTGTCTTTTTTT GTATAGTTAACACACTACCGAATGTG CTTTAGATAGCC Sbjct: 776 ACTGTACAGTGTCTTTTTTTTGTATAGTTAACACACTACCGAATGTG-CTTTAGATAGCC 834 Query: 2503 CTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAA 2562 CTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAA Sbjct: 835 CTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAA 894 Query: 2563 ATTGGCATGGAAA 2575 ATTGGCATGGAAA Sbjct: 895 ATTGGCATGGAAA 907 Score = 754 (113.1 bits), Expect = 1.3e-148, Sum P(3) = 1.3e-148 Identities = 162/176 (92%), Positives = 162/176 (92%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||||||||| ||| | || || ||||||||||| ||||||||||||||||| |||||||| Sbjct: 305 TTCGGCCTTTTTCTTGTTTTGTTCTGAGTATCGTCCAAAAATCAAAGGAGAGCATCCTGG 364 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 ||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 365 CCTATCCATTGGTGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACCGCTGCAGA 424 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 ||||||||| |||||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 425 TGACAAGCACCCTTATGAAAAGAAGGCTGCTAAGCTGAAGGAGAAGTACGAAAAGG 480 Score = 732 (109.8 bits), Expect = 1.3e-148, Sum P(3) = 1.3e-148 Identities = 170/192 (88%), Positives = 170/192 (88%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATT TTTGTG Sbjct: 9 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTCTTTGTG 68 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAACTTG CGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG Sbjct: 69 CAAACTTGCCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 128 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGT 180 TTTTCTAAGAAGTGCTCAGA AGGTGGAAG A A G CT AA A G AA A G Sbjct: 129 TTTTCTAAGAAGTGCTCAGAAAGGTGGAAG--ACCATGTCTGCTAA-A-GAGAA-AGGAA 183 Query: 181 AATTAAAAGACA 192 AATT AAGACA Sbjct: 184 AATTTGAAGACA 195 Score = 718 (107.7 bits), Expect = 1.2e-115, Sum P(2) = 1.2e-115 Identities = 194/247 (78%), Positives = 194/247 (78%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGA ATGGCAAA GCGGACAAG Sbjct: 153 TGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGACATGGCAAAGGCGGACAAG 212 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GCCCGTTATGAAAGAGAAATGAAAAC TA AT CCTCC AAAGGGGAGACAAAAAAGAAG Sbjct: 213 GCCCGTTATGAAAGAGAAATGAAAACTTACATACCTCCTAAAGGGGAGACAAAAAAGAAG 272 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTATCTTGCCTGTTTTTACTTCCC 503 TTCAAGGATCCCAATGCACCCAAGAGGCCTCC T G T TT C TGTTTT TTC Sbjct: 273 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTTTTCTTGTTTTG--TTCTG 330 Query: 504 AGACACGTTTTACAGTAGAATCTGAGAGAAATTTAGCA-AGCTACTTTGTCAGTTTAGAG 562 AG CGT A A T AA GAGAG A T GC A C A TT GT A TT A Sbjct: 331 AGTATCGTCCAAAAATCAAAG--GAGAGCATCCTGGCCTATCCA-TTGGTGATGTTGCAA 387 Query: 563 TGTAAATG 570 G AA TG Sbjct: 388 AGAAACTG 395 >Y00463 Rat mRNA for high mobility group protein HMG1 Length = 825 Plus Strand HSPs: Score = 1492 (223.9 bits), Expect = 1.9e-148, Sum P(4) = 1.9e-148 Identities = 316/334 (94%), Positives = 316/334 (94%), Strand = Plus / Plus Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGA 2199 T TG GAAGGATATTGCTGC TA GAGCTAAAGGAAA CCTGATGCAGC AAAAAGGG Sbjct: 490 TATGAGAAGGATATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGG 549 Query: 2200 GTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAA 2259 GT GTCAAGGCTGA AA AGCAAGAAAAAGAAGGAAGAGGA GA GA GAGGA GATGAA Sbjct: 550 GTGGTCAAGGCTGAGAAGAGCAAGAAAAAGAAGGAAGAGGAAGACGACGAGGAGGATGAA 609 Query: 2260 GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGAT 2319 GAGGATGAGGA GAGGAGGAAGA GA GAAGATGAAGATGAAGAAGAAGATGATGATGAT Sbjct: 610 GAGGATGAGGAAGAGGAGGAAGAAGAGGAAGATGAAGATGAAGAAGAAGATGATGATGAT 669 Query: 2320 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTG 2379 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTT CTTGTCTATAAAGCATTTAACCCCCCTG Sbjct: 670 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTT-CTTGTCTATAAAGCATTTAACCCCCCTG 728 Query: 2380 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 2439 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT Sbjct: 729 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 788 Query: 2440 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAAC 2474 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAAC Sbjct: 789 TTAAACTGTACAGTGTCTTTTTTTGTATAGTTAAC 823 Score = 709 (106.4 bits), Expect = 1.9e-148, Sum P(4) = 1.9e-148 Identities = 157/176 (89%), Positives = 157/176 (89%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||||||||||||| | ||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 324 TTCGGCCTTCTTCTTGTTCTGTTCTGAGTACCGCCCAAAAATCAAAGGCGAGCATCCTGG 383 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 | | |||||||||||||||||||||||| | |||||||||||||| ||||||||||| || Sbjct: 384 CTTATCCATTGGTGATGTTGCGAAGAAATTAGGAGAGATGTGGAACAACACTGCTGCGGA 443 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||| |||||||||||||| || ||||||||||| || || || |||| Sbjct: 444 TGACAAGCAGCCCTATGAAAAGAAGGCCGCCAAGCTGAAGGAGAAGTATGAGAAGG 499 Score = 670 (100.5 bits), Expect = 1.9e-148, Sum P(4) = 1.9e-148 Identities = 154/176 (87%), Positives = 154/176 (87%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTC TCATATGCATT TTTGTG Sbjct: 28 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCATTCTTTGTG 87 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAAC TG CGGGAGGAGCA AAGAAGAAGCACCC GATGCTTC GTCAACTTCTCAGAG Sbjct: 88 CAAACCTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAG 147 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 TT TC AAGAAGTGCTCAGAGAGGTGGAAG A G GCT AA AA A G AA Sbjct: 148 TTCTCCAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAAAAGGGGAA 203 Score = 656 (98.4 bits), Expect = 1.9e-148, Sum P(4) = 1.9e-148 Identities = 154/177 (87%), Positives = 154/177 (87%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGA AA GG AAATTTGAAGATATGGCAAA GC GACAAG Sbjct: 172 TGGAAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATATGGCAAAGGCTGACAAG 231 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GC CGTTATGAAAGAGAAATGAAAACCTA ATCCC CCCAAAGGGGAGAC AAAAAGAAG Sbjct: 232 GCTCGTTATGAAAGAGAAATGAAAACCTACATCCCCCCCAAAGGGGAGACCAAAAAGAAG 291 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT-TACT 499 TTCAAGGA CCCAATGC CCCAAGAGGCCTCC T G T CTT C TGTT T T CT Sbjct: 292 TTCAAGGACCCCAATGCCCCCAAGAGGCCTCCTTCGGCCTTCTT-CTTGTTCTGTTCT 348 >M63852 Rat high mobility group 1 protein synthetic gene, complete cds. Length = 924 Plus Strand HSPs: Score = 1477 (221.6 bits), Expect = 8.0e-148, Sum P(4) = 8.0e-148 Identities = 313/331 (94%), Positives = 313/331 (94%), Strand = Plus / Plus Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGA 2199 T TG GAAGGATATTGCTGC TA GAGCTAAAGGAAA CCTGATGCAGC AAAAAGGG Sbjct: 551 TATGAGAAGGATATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGG 610 Query: 2200 GTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAA 2259 GT GTCAAGGCTGA AA AGCAAGAAAAAGAAGGAAGAGGA GA GA GAGGA GATGAA Sbjct: 611 GTGGTCAAGGCTGAGAAGAGCAAGAAAAAGAAGGAAGAGGAAGACGACGAGGAGGATGAA 670 Query: 2260 GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGAT 2319 GAGGATGAGGA GAGGAGGAAGA GA GAAGATGAAGATGAAGAAGAAGATGATGATGAT Sbjct: 671 GAGGATGAGGAAGAGGAGGAAGAAGAGGAAGATGAAGATGAAGAAGAAGATGATGATGAT 730 Query: 2320 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTG 2379 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTT CTTGTCTATAAAGCATTTAACCCCCCTG Sbjct: 731 GAATAAGTTGGTTCTAGCGCAGTTTTTTTTT-CTTGTCTATAAAGCATTTAACCCCCCTG 789 Query: 2380 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 2439 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT Sbjct: 790 TACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTT 849 Query: 2440 TTAAACTGTACAGTGTCTTTTTTTGTATAGTT 2471 TTAAACTGTACAGTGTCTTTTTTTGTATAGTT Sbjct: 850 TTAAACTGTACAGTGTCTTTTTTTGTATAGTT 881 Score = 709 (106.4 bits), Expect = 8.0e-148, Sum P(4) = 8.0e-148 Identities = 157/176 (89%), Positives = 157/176 (89%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||||||||||||| | ||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 385 TTCGGCCTTCTTCTTGTTCTGTTCTGAGTACCGCCCAAAAATCAAAGGCGAGCATCCTGG 444 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 | | |||||||||||||||||||||||| | |||||||||||||| ||||||||||| || Sbjct: 445 CTTATCCATTGGTGATGTTGCGAAGAAATTAGGAGAGATGTGGAACAACACTGCTGCGGA 504 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||| |||||||||||||| || ||||||||||| || || || |||| Sbjct: 505 TGACAAGCAGCCCTATGAAAAGAAGGCCGCCAAGCTGAAGGAGAAGTATGAGAAGG 560 Score = 670 (100.5 bits), Expect = 8.0e-148, Sum P(4) = 8.0e-148 Identities = 154/176 (87%), Positives = 154/176 (87%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTC TCATATGCATT TTTGTG Sbjct: 89 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCATTCTTTGTG 148 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAAC TG CGGGAGGAGCA AAGAAGAAGCACCC GATGCTTC GTCAACTTCTCAGAG Sbjct: 149 CAAACCTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAG 208 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 TT TC AAGAAGTGCTCAGAGAGGTGGAAG A G GCT AA AA A G AA Sbjct: 209 TTCTCCAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAAAAGGGGAA 264 Score = 656 (98.4 bits), Expect = 8.0e-148, Sum P(4) = 8.0e-148 Identities = 154/177 (87%), Positives = 154/177 (87%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGA AA GG AAATTTGAAGATATGGCAAA GC GACAAG Sbjct: 233 TGGAAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATATGGCAAAGGCTGACAAG 292 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GC CGTTATGAAAGAGAAATGAAAACCTA ATCCC CCCAAAGGGGAGAC AAAAAGAAG Sbjct: 293 GCTCGTTATGAAAGAGAAATGAAAACCTACATCCCCCCCAAAGGGGAGACCAAAAAGAAG 352 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT-TACT 499 TTCAAGGA CCCAATGC CCCAAGAGGCCTCC T G T CTT C TGTT T T CT Sbjct: 353 TTCAAGGACCCCAATGCCCCCAAGAGGCCTCCTTCGGCCTTCTT-CTTGTTCTGTTCT 409 >X12796 Bovine mRNA for high mobility group 1 (HMG1) protein Length = 1236 Plus Strand HSPs: Score = 2021 (303.2 bits), Expect = 1.1e-147, Sum P(3) = 1.1e-147 Identities = 419/433 (96%), Positives = 419/433 (96%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATATTGC GCATA CGAGCTAAAGG AA CCTGATGCAGCAAAAAAGGGAGTTGTC Sbjct: 587 AAGGATATTGCCGCATACCGAGCTAAAGGGAAACCTGATGCAGCAAAAAAGGGAGTTGTC 646 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AAGGCTGAAAA AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT Sbjct: 647 AAGGCTGAAAAGAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 706 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GAGGAGGAGGA GAAGATGAAGA GATGA GA GA GAAGAAGATGATGATGATGAATAA Sbjct: 707 GAGGAGGAGGAAGAAGATGAAGAGGATGAGGAGGAGGAAGAAGATGATGATGATGAATAA 766 Query: 2326 GTTGGTTCTAGCGCAGTTTTTTTTTT-CTTGTCTATAAAGCATTTAACCCCCCTGTACAC 2384 GTTGGTTCTAGCGCAGTTTTTTTTTT CTTGTCTATAAAGCATTTAACCCCCCTGTACAC Sbjct: 767 GTTGGTTCTAGCGCAGTTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACAC 826 Query: 2385 AACTCACTCCTTTTAAAGAAAAAAA--TTGAAATGTAAGGCTGTGTAAGATTTGTTTTTA 2442 A CTCACTCCTTTTAAAGAAAAAAA TTGAAATGTAAGGCTGTGTAAGATTTGTTTTTA Sbjct: 827 ACCTCACTCCTTTTAAAGAAAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTA 886 Query: 2443 AACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCC 2502 AACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCC Sbjct: 887 AACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCC 946 Query: 2503 CTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAA 2562 CTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAA Sbjct: 947 CTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAA 1006 Query: 2563 ATTGGCATGGAAA 2575 ATTGGCATGGAAA Sbjct: 1007 ATTGGCATGGAAA 1019 Score = 745 (111.8 bits), Expect = 1.1e-147, Sum P(3) = 1.1e-147 Identities = 161/176 (91%), Positives = 161/176 (91%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||||||||| ||| | || || ||||||||||| |||||||||||||| ||||||||||| Sbjct: 415 TTCGGCCTTTTTCTTGTTTTGTTCTGAGTATCGTCCAAAAATCAAAGGCGAACATCCTGG 474 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 475 CCTGTCTATTGGTGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCGGA 534 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 ||| |||||||||||||| ||||||||||| |||||||||||||| || ||||||| Sbjct: 535 TGATAAGCAGCCTTATGAGAAGAAGGCTGCTAAGCTGAAGGAAAAGTATGAAAAGG 590 Score = 714 (107.1 bits), Expect = 1.1e-147, Sum P(3) = 1.1e-147 Identities = 168/192 (87%), Positives = 168/192 (87%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATT TTTGTG Sbjct: 119 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTCTTTGTG 178 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAACTTG CGGGAGGAGCA AAGAAGAAGCACCC GATGCTTC GTCAACTTCTCAGAG Sbjct: 179 CAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAG 238 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGT 180 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG A A G CT AA A G AA A G Sbjct: 239 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG--ACCATGTCTGCTAA-A-GAGAA-AGGAA 293 Query: 181 AATTAAAAGACA 192 AATT AAGACA Sbjct: 294 AATTTGAAGACA 305 Score = 708 (106.2 bits), Expect = 2.0e-147, Sum P(3) = 2.0e-147 Identities = 158/177 (89%), Positives = 158/177 (89%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGA ATGGCAAA GCGGACAAG Sbjct: 263 TGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGACATGGCAAAGGCGGACAAG 322 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GCCCGTTATGAAAGAGAAATGAAAAC TATAT CCTCC AAAGGGGA ACAAAAAAGAAG Sbjct: 323 GCCCGTTATGAAAGAGAAATGAAAACTTATATTCCTCCTAAAGGGGAAACAAAAAAGAAG 382 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTATCTTGCCTGTTTT-TACT 499 TTCAAGGATCCCAATGCACC AAGAGGCCTCC T G T TT C TGTTTT T CT Sbjct: 383 TTCAAGGATCCCAATGCACCTAAGAGGCCTCCTTCGGCCTTTTTCTTGTTTTGTTCT 439 >D14718 Human chromosomal protein HMG1 related gene. Length = 2140 Plus Strand HSPs: Score = 1388 (208.3 bits), Expect = 1.0e-117, Sum P(3) = 1.0e-117 Identities = 318/360 (88%), Positives = 318/360 (88%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAG-AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AA GC AAAAAG AAG AA AG AGGAAGA GAGGAAGATGA GA GATGA GA GA Sbjct: 1446 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAAGAT 1505 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCT 2334 A GA GA GA G AGATGAAGA GA GAAGA GA GA GATGATGAATAAGTTGGTTCT Sbjct: 1506 TATGATGAGGAGGTAGATGAAGAAGATGAAGATGAAGAAGATGATGAATAAGTTGGTTCT 1565 Query: 2335 AGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCC 2394 AGCG GTTTTTTTT TC GTCTATAAAGCATTTAACCC CTGT CACAA TCACTCC Sbjct: 1566 AGCG--GTTTTTTTTCTC--GTCTATAAAGCATTTAACCCTACTGTTCACAAGTCACTCC 1621 Query: 2395 TTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTG 2454 TTTTAAAGAAAAAAAT GAAATGTAAG CTGTGTA GATTTGTTTTTAAACTGTACAGTG Sbjct: 1622 TTTTAAAGAAAAAAATGGAAATGTAAGTCTGTGTAGGATTTGTTTTTAAACTGTACAGTG 1681 Query: 2455 TCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGG 2514 TCTTTTTTT TA AGTTAACACACTACCGAATGTGTCTTTAGATAGCCCT TCCTGGTGG Sbjct: 1682 TCTTTTTTTATAAAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTCTCCTGGTGG 1741 Query: 2515 TATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAA 2574 T TTTTCAATAGCCACTAACCTTGCCTGGT CAGTATG GGGTTGTAAATTGGCATGGAA Sbjct: 1742 TGTTTTCAATAGCCACTAACCTTGCCTGGTGCAGTATGCGGGTTGTAAATTGGCATGGAA 1801 Query: 2575 A 2575 A Sbjct: 1802 A 1802 Score = 749 (112.4 bits), Expect = 8.7e-78, Sum P(3) = 8.7e-78 Identities = 161/175 (92%), Positives = 161/175 (92%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 |||||||||||||||||| |||||||||| |||||||||||||||||||||||| || || Sbjct: 1386 AAGGATATTGCTGCATATTGAGCTAAAGGGAAGCCTGATGCAGCAAAAAAGGGATTTATC 1445 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1446 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAAGAT 1505 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 | || ||||||| ||||||||||||||||||||||||||| ||||| | | || Sbjct: 1506 TATGATGAGGAGGTAGATGAAGAAGATGAAGATGAAGAAGATGATGAATAAGTTG 1560 Score = 736 (110.4 bits), Expect = 1.0e-117, Sum P(3) = 1.0e-117 Identities = 160/176 (90%), Positives = 160/176 (90%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||| ||||| ||||| |||||||||||||||| ||||||||| ||||||||||| | ||| Sbjct: 1214 TTCAGCCTTTTTCCTGTTCTGCTCTGAGTATCACCCAAAAATTAAAGGAGAACAACTTGG 1273 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 |||| ||||| ||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 CCTGCCCATTAGTGATGTCGTGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1333 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 ||||||||||||| ||||||||||||||| ||||| |||||||||||| |||||| Sbjct: 1334 AGACAAGCAGCCTTGTGAAAAGAAGGCTGCAAAGCTAAAGGAAAAATACAAAAAGG 1389 Score = 710 (106.5 bits), Expect = 1.0e-117, Sum P(3) = 1.0e-117 Identities = 156/172 (90%), Positives = 156/172 (90%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGAGAAAGGA AATTTGAAGATATGGCAAA G G ACAAG Sbjct: 1063 TGGAAGACCATGTCTGCTAAAGAGAAAGGACAATTTGAAGATATGGCAAAGGTG-ACAAG 1121 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GCCC TTATGAAAGAGAA TGAAAACCTA ATCCCTCCCAAAGGGGAGACAAAAAAGAAG Sbjct: 1122 GCCCATTATGAAAGAGAAGTGAAAACCTAAATCCCTCCCAAAGGGGAGACAAAAAAGAAG 1181 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTATCTTGCCTGTTTT 495 TTCAAGGATCCCAATGCACCCAAGAGGCCTCC T AG T TT CCTGTT T Sbjct: 1182 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCAGCCTTTTTCCTGTTCT 1233 Score = 689 (103.4 bits), Expect = 8.8e-117, Sum P(3) = 8.8e-117 Identities = 175/210 (83%), Positives = 175/210 (83%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 AT GGCAAAGGAGAT CTAAGAAGCC AGAGGCAAAATGTCATCATATGCATTTTTTGTG Sbjct: 919 ATTGGCAAAGGAGATTCTAAGAAGCCAAGAGGCAAAATGTCATCATATGCATTTTTTGTG 978 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAACTTGTCGGGA GAGCATAAGAAG AGCACCCAGATGCTTCAGTCAACTTCTCAGAG Sbjct: 979 CAAACTTGTCGGGAAGAGCATAAGAAGCAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 1038 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGT 180 TTTTCTAAGAA GCTCAGAGAGGTGGAAG A A G CT AA A G AA A G Sbjct: 1039 TTTTCTAAGAAAGGCTCAGAGAGGTGGAAG--ACCATGTCTGCTAA-A-GAGAA-AGGAC 1093 Query: 181 AATTAAAAGACAGTTTCCAAT-TGAGGATGC 210 AATT AAGA A T C AA TGA A GC Sbjct: 1094 AATTTGAAGATA-TGGCAAAGGTGACAAGGC 1123 Score = 318 (47.7 bits), Expect = 1.8e-58, Sum P(3) = 1.8e-58 Identities = 84/108 (77%), Positives = 84/108 (77%), Strand = Plus / Plus Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AA GC AAAAAG AAG AA AG AGGAAGA GAGGAAGATGA GAAGAT A GA GA Sbjct: 1456 AAAGCAAGAAAAAG-AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAAGATTATGATGAG 1514 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGAT 2313 GAGG GA GA GAAGATGAAGA GA GAAGATGA GAA AAG TG T Sbjct: 1515 GAGGTAGATGAAGAAGATGAAGATGAAGAAGATGATGAATAAGTTGGT 1562 >Y00365 Chinese hamster HMG-1 gene for high mobility group protein 1 Length = 2058 Plus Strand HSPs: Score = 1219 (182.9 bits), Expect = 3.2e-107, Sum P(3) = 3.2e-107 Identities = 335/414 (80%), Positives = 335/414 (80%), Strand = Plus / Plus Query: 2162 ATCGAGCTAAAGGAAAGCCTGATGCAG-CAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC 2220 AT AGC AAA A G TG T AG CA AAAAG G G AA G G AA A G Sbjct: 401 ATGCAGCGAAAA-AGGGGGTGGTTAAGGCAGAAAAGAGCAA-GAAAAAGAAGGAAGAGG- 457 Query: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 AAGA A GA GGA GA GA GA GATGAGGAAGA GA GA GA GAGGA GA GA GA Sbjct: 458 AAGATGATGA-GGAGGATGAAGAGGATGAGGAAGAGGAGGAAGAAGAGGAAGACGAAGAT 516 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA-TAAGTTG-GTTCTAGCG 2338 GA GAAGAAGATGA GATGA GAA AAG TG T T G A T TT GTT T Sbjct: 517 GAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCAGTTTTTTTTGTTTTTTTT 576 Query: 2339 CAGTTTTTTTTTTCTTGTCT-AT-AAAGCATTTAACCCCCCTGTACACAACTCACTCCTT 2396 GTTTTTTTTTT TTGTCT AT AAAGCATTTAACCCCCCTGTACACAACTCACTCCTT Sbjct: 577 G-GTTTTTTTTTTTTTGTCTCATTAAAGCATTTAACCCCCCTGTACACAACTCACTCCTT 635 Query: 2397 TTAAAGAAAAAAA--TTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTG 2454 TTAAAGAAAAAAA TTGAA TGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTG Sbjct: 636 TTAAAGAAAAAAAAATTGAA-TGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTG 694 Query: 2455 TCTTTTTTT-GTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTG 2513 TCTTTTTTT GT T GTTAACACACTACCGA TGTGTCTT GAT G CCTGTCCTGGTG Sbjct: 695 TCTTTTTTTTGTGT-GTTAACACACTACCGA-TGTGTCTTG-GATGGTCCTGTCCTGGTG 751 Query: 2514 GTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGA 2573 GTATTTTCAAT CCACTAACCT GCCTGGTACAGT TGGGGGTTGTAAATTGGCATGGA Sbjct: 752 GTATTTTCAATGACCACTAACCT-GCCTGGTACAGTCTGGGGGTTGTAAATTGGCATGGA 810 Query: 2574 AA 2575 AA Sbjct: 811 AA 812 Score = 867 (130.1 bits), Expect = 3.4e-82, Sum P(3) = 3.4e-82 Identities = 191/213 (89%), Positives = 191/213 (89%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 |||||||||||||| || ||||||||||||| || |||||||| |||||||| || || Sbjct: 364 AAGGATATTGCTGCTTACAGAGCTAAAGGAAAACCCGATGCAGCGAAAAAGGGGGTGGTT 423 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 ||||| ||||| ||||||||||||||||||||||| || |||||||| |||||||||||| Sbjct: 424 AAGGCAGAAAAGAGCAAGAAAAAGAAGGAAGAGGAAGATGATGAGGAGGATGAAGAGGAT 483 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 ||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||||| Sbjct: 484 GAGGAAGAGGAGGAAGAAGAGGAAGACGAAGATGAAGAAGAAGATGATGATGATGAATAA 543 Query: 2326 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCT 2358 |||||||||||||||||||||||| | || | | Sbjct: 544 GTTGGTTCTAGCGCAGTTTTTTTTGTTTTTTTT 576 Score = 763 (114.5 bits), Expect = 3.2e-107, Sum P(3) = 3.2e-107 Identities = 163/176 (92%), Positives = 163/176 (92%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 ||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 192 TTCGGCCTTCTTCTTGTTCTGTTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCAGG 251 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 252 GCTGTCCATTGGTGATGTTGCAAAGAAACTGGGAGAGATGTGGAACAACACTGCTGCAGA 311 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 |||||||||||| ||||||||||||||||| || |||||||| || || ||||||| Sbjct: 312 TGACAAGCAGCCCTATGAAAAGAAGGCTGCTAAACTGAAGGAGAAGTATGAAAAGG 367 Score = 647 (97.1 bits), Expect = 3.2e-107, Sum P(3) = 3.2e-107 Identities = 153/177 (86%), Positives = 153/177 (86%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGCTAAAGA AA GGAAAATTTGA GA ATGGCAAA GC GACAA Sbjct: 40 TGGAAGACCATGTCTGCTAAAGAAAAGGGAAAATTTGAGGACATGGCAAAGGCTGACAAA 99 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GC CGTTATGAAAGAGAAATGAAAACCTA ATCCC CCCAAAGGGGAGAC AAAAAGAAG Sbjct: 100 GCTCGTTATGAAAGAGAAATGAAAACCTACATCCCCCCCAAAGGGGAGACCAAAAAGAAG 159 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT-TACT 499 TTCAAGGA CCCAATGCACCCAAGAGGCCTCC T G T CTT C TGTT T T CT Sbjct: 160 TTCAAGGACCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTT-CTTGTTCTGTTCT 216 Score = 203 (30.5 bits), Expect = 2.5e-87, Sum P(3) = 2.5e-87 Identities = 63/87 (72%), Positives = 63/87 (72%), Strand = Plus / Plus Query: 106 GTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA 164 GTCAACTTCTCAGAGTT TC AAGAAGTGCTCAGA AGGTGGAAG A G GCT AA Sbjct: 1 GTCAACTTCTCAGAGTTCTCGAAGAAGTGCTCAGAAAGGTGGAAGACCATGTCTGCTAAA 60 Query: 165 AACATGCTAACAAGGTAATTAAAAGACA 192 A A G AA AA T A A A G CA Sbjct: 61 GAAAAGGGAA-AATTTGAGGACATGGCA 87 >M26110 Bovine high-mobility-group protein (HMG-1) mRNA, 3' end. Length = 791 Plus Strand HSPs: Score = 1395 (209.3 bits), Expect = 4.8e-77, Sum P(2) = 4.8e-77 Identities = 329/379 (86%), Positives = 329/379 (86%), Strand = Plus / Plus Query: 2200 GTTGTCAAG-GCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGA 2258 G TG AAG GC AAAAAG AAG AA AG AGGAAGA GAGGAAGATGA GA GATGA Sbjct: 187 GCTGAAAAGAGCAAGAAAAAG-AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGA 245 Query: 2259 AGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGA 2318 GAGGA GA GA GA GA GA GATGA GA GA GAAGA GA GA GA GATGA A G Sbjct: 246 GGAGGAGGAAGAAGATGAAGAGGATGAGGAGGAGGAAGAAGATGATGATGATGAATAAGT 305 Query: 2319 TGAATA-AGTTG-GTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCC 2376 TG T AG GTT T TTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCC Sbjct: 306 TGGTTCTAGCGCAGTTTTTTTTTT-TTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCC 364 Query: 2377 CTGTACACAACTCACTCCTTTTAAAGAAAAAAA--TTGAAATGTAAGGCTGTGTAAGATT 2434 CTGTACACAACTCACTCCTTTTAAAGAAAAAAA TT AAATGTAAGGCTGTGTAAGATT Sbjct: 365 CTGTACACAACTCACTCCTTTTAAAGAAAAAAAAATTAAAATGTAAGGCTGTGTAAGATT 424 Query: 2435 TGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTT 2494 TGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTT Sbjct: 425 TGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTT 484 Query: 2495 AGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGG 2554 AGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACC TGCCTGGTACAGTATGGG Sbjct: 485 AGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCCTGCCTGGTACAGTATGGG 544 Query: 2555 GGTTGTAAATTGGCATGGAAA 2575 GGTTGTAAATTGGCATGGAAA Sbjct: 545 GGTTGTAAATTGGCATGGAAA 565 Score = 949 (142.4 bits), Expect = 1.8e-55, Sum P(2) = 1.8e-55 Identities = 201/215 (93%), Positives = 201/215 (93%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 ||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 124 AAGGATATTGCCGCATACCGAGCCAAAGGGAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 183 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 AAGGCTGAAAAGAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 243 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 ||||||||||| ||||||||||| ||||| || || |||||||||||||||||||||||| Sbjct: 244 GAGGAGGAGGAAGAAGATGAAGAGGATGAGGAGGAGGAAGAAGATGATGATGATGAATAA 303 Query: 2326 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTAT 2360 |||||||||||||||||||||||||| || | | | Sbjct: 304 GTTGGTTCTAGCGCAGTTTTTTTTTTTTTTTTTTT 338 Score = 500 (75.0 bits), Expect = 4.8e-77, Sum P(2) = 4.8e-77 Identities = 108/118 (91%), Positives = 108/118 (91%), Strand = Plus / Plus Query: 1028 GGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCA 1087 || |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 10 GGGGTGTCTATTGGTGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCG 69 Query: 1088 GATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 ||||| |||||||||||||| ||||||||||| |||||||||||||| || ||||||| Sbjct: 70 GATGATAAGCAGCCTTATGAGAAGAAGGCTGCTAAGCTGAAGGAAAAGTATGAAAAGG 127 >Z46757 M.musculus mRNA for high mobility group 2 protein. Length = 870 Plus Strand HSPs: Score = 517 (77.6 bits), Expect = 2.7e-68, Sum P(4) = 2.7e-68 Identities = 137/175 (78%), Positives = 137/175 (78%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGC 1030 TC GCCTTCTTCCT TT TGCTCTGA ATCGCCCAAA ATCAAA GAACA CC GGC Sbjct: 394 TCTGCCTTCTTCCTGTTTTGCTCTGAAAATCGCCCAAAGATCAAAATTGAACACCCAGGC 453 Query: 1031 CTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAA-CACTGCTGCAGA 1089 CTGTC ATTGG GAT TGCGAAGAAACTGGG GAGATGTGG T A CA T CTGC A Sbjct: 454 CTGTCTATTGGAGATACTGCGAAGAAACTGGGTGAGATGTGGTCTGAGCAAT-CTGCCAA 512 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 GA AA CA CC TATGA AGAA GC GC AA CT AAGGA AA TA GAAAAGG Sbjct: 513 AGATAAACAACCGTATGAGCAGAAAGCAGCTAAACTAAAGGAGAAGTATGAAAAGG 568 Score = 462 (69.3 bits), Expect = 2.7e-68, Sum P(4) = 2.7e-68 Identities = 118/150 (78%), Positives = 118/150 (78%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||||||| || || || || |||||| | ||||||||||| || || || || || ||| Sbjct: 97 ATGGGCAAGGGTGACCCCAACAAGCCGCGGGGCAAAATGTCCTCGTACGCCTTCTTCGTG 156 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || || |||||||| ||||||||||| || || | || || |||||| | ||| Sbjct: 157 CAGACCTGCCGCGAGGAGCACAAGAAGAAGCATCCCGACTCGTCGGTGAACTTCGCCGAG 216 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 || || ||||| ||||| ||||| |||||| Sbjct: 217 TTCTCCAAGAAATGCTCCGAGAGATGGAAG 246 Score = 454 (68.1 bits), Expect = 2.7e-68, Sum P(4) = 2.7e-68 Identities = 134/172 (77%), Positives = 134/172 (77%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAA-TTTGAAGATATGGCAAA-AGCGGACA 381 T G AGACCATGTCTGC AA GA AAAG AA TTTGAAGAT TGGC AA AGCG ACA Sbjct: 241 TGGAAGACCATGTCTGCAAAGGA-AAAGTCCAAGTTTGAAGATTTGGCCAAGAGCG-ACA 298 Query: 382 AGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGA 441 A GC CGTTATGA AG GA ATGAA A CTAT T CCTCCCAAAGGGGA A A AAA GA Sbjct: 299 AAGCTCGTTATGACAGGGAGATGAAGAACTATGTTCCTCCCAAAGGGGATA-AGAAAGGA 357 Query: 442 A-GTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 A G AA GA CCCAATGC CC AAGAG CC CCGT G T CTT CCTGTTTT Sbjct: 358 AAGAAAAAAGACCCCAATGCTCCGAAGAGACCACCGTCTGCCTTCTT-CCTGTTTT 412 Score = 423 (63.5 bits), Expect = 2.7e-68, Sum P(4) = 2.7e-68 Identities = 201/302 (66%), Positives = 201/302 (66%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATATTGCTGCATA CG GC AA GG AA TGA GCAG AAA AAGGG TG Sbjct: 565 AAGGATATTGCTGCATACCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGTCCTGGT 624 Query: 2206 AAGGCTGAAAAAAGCAA-GAAAAAGAAGGAAG-AGGAG--GAAGATGAGGAAGATGAAGA 2261 A GGC A A CAA GAA AAGAA GAA AG AG GA GA GAGGAAGA GA GA Sbjct: 625 A-GGCCAACAGGCTCAAAGAAGAAGAACGAACCAGAAGATGAGGAGGAGGAAGAAGAGGA 683 Query: 2262 GGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GGA GAGGAGGA GA GA GA GAAGAAGA GA GATGAAGAA AAG G TG T T A Sbjct: 684 GGAAGAGGAGGAAGATGACGAGGAAGAAGAGGAGGATGAAGAATAAGTGGCTG-TCCTAA 742 Query: 2322 ATAAGTTG-GT-TCTA-GCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCT 2378 A GT G GT T T GC CAG TT TTT T G CTA AA T AA C T Sbjct: 743 AGT-GTGGAGTATATTTGCTCAGGCAATTATTT-T-G-CTAAGAATG-TGAAATTCAAGT 797 Query: 2379 GTA-CACAAC-TCA-CTCCTTT-TAAAGAAAAAAATTGAAAT--GTAAGGCTGTGTAAGA 2432 G A C CAAC T A CT C T TAAA AA A GA T GTA GCTG T AGA Sbjct: 798 GCAGCTCAACATTAGCTTCAGTATAAA-AACTGTACAGATTTTTGTATAGCTGA-TGAGA 855 Query: 2433 TTTGTTTTTAAA 2444 TT TTT TA A Sbjct: 856 TTC-TTTGTAGA 866 >X67668 M.musculus mRNA for high mobility group 2 protein Length = 847 Plus Strand HSPs: Score = 499 (74.9 bits), Expect = 2.2e-62, Sum P(4) = 2.2e-62 Identities = 135/175 (77%), Positives = 135/175 (77%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGC 1030 TC GCCTTCT CCT TT TGCTCTGA ATCGCCCAAA ATCAAA GAA A CC GGC Sbjct: 433 TCTGCCTTCTGCCTGTTTTGCTCTGAAAATCGCCCAAAGATCAAAATTGAATACCCGGGC 492 Query: 1031 CTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAA-CACTGCTGCAGA 1089 CTGTC ATTGG GAT TGCGAAGAAACTGGG GAGATGTGG T A CA T CTGC A Sbjct: 493 CTGTCTATTGGAGATACTGCGAAGAAACTGGGTGAGATGTGGTCTGAGCAGT-CTGCCAA 551 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 GA AA CA CC TATGA AGAA GC GC AA CT AAGGA AA TA GAAAAGG Sbjct: 552 AGAGAAACAACCGTATGAGCAGAAAGCAGCTAAACTAAAGGAGAAGTATGAAAAGG 607 Score = 455 (68.3 bits), Expect = 2.2e-62, Sum P(4) = 2.2e-62 Identities = 119/150 (79%), Positives = 119/150 (79%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGG AA GG GA CC A AAGCCG GGCAAAATGTC TC TA GC TTTTTTGTG Sbjct: 136 ATGGGTAAGGGTGACCCCATCAAGCCGCTGGGCAAAATGTCCTCTTACGCCTTTTTTGTG 195 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCA-CCCAGATGCTTCAGTCAACTTCTCAGA 119 CA AC TG CGGGAGGAGCA AAGAAGAAGCA CCCA AT C TC GTCAACTTC C GA Sbjct: 196 CAGACCTGCCGGGAGGAGCACAAGAAGAAGCATCCCA-ATTCGTCGGTCAACTTCGCCGA 254 Query: 120 GTTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 G T TC AAGAA TGCTC AGAG TGGAAG Sbjct: 255 GATCTCCAAGAAATGCTCCAAGAGATGGAAG 285 Score = 423 (63.5 bits), Expect = 2.2e-62, Sum P(4) = 2.2e-62 Identities = 127/172 (73%), Positives = 127/172 (73%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAA-AGCGGACAA 382 T G AGACCATGTCTGC AA GA AA AA TTTGAAGAT TGGC AA AGCG ACAA Sbjct: 280 TGGAAGACCATGTCTGCAAAGGAAAACTCGAAGTTTGAAGATTTGGCCAAGAGCG-ACAA 338 Query: 383 GGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAA 442 GC GTTAT A AG GA ATGAA A CTAT T CTCCCAAAGG GA A A AAA GAA Sbjct: 339 AGCTTGTTATTACAGGGAGATGAAGAACTATGTTTCTCCCAAAGGTGATA-AGAAAGGAA 397 Query: 443 -GTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTATCTTGCCTGTTTT 495 G AA GATCC AATGC CC AAGAG CC CCGT G T TGCCTGTTTT Sbjct: 398 AGAAAAAAGATCCAAATGCTCCGAAGAGACCACCGTCTGCCTTCTGCCTGTTTT 451 Score = 347 (52.1 bits), Expect = 2.2e-62, Sum P(4) = 2.2e-62 Identities = 137/203 (67%), Positives = 137/203 (67%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGAT TTGCTGCATA CG G AA GG AA TGA GCAG AAA AAGGG TG Sbjct: 604 AAGGATTTTGCTGCATACCGTGTCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGTCCTGGT 663 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 A GGC A A GC AA AAGAA GA AG AAGATGAGGAAGA GAAGAGGA Sbjct: 664 A-GGCC--AGCAGGCTCAAAGAAGAATGACTC--AG-AAGATGAGGAAGAAGAAGAGGAG 717 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGA-TGAATA 2324 GA GA GA GAGG GA GAAGA GATGAAGA AAG G AT T A G TG A Sbjct: 718 GAAGATGAAGAGGGGGAAGAAGAGGATGAAGAATAAGTGGCT-ATCCTAAAGTGTGGAGT 776 Query: 2325 AGTTGGTTCT-AGCGCAGTTTTTTT 2348 A TG T CT AG GCAGTT TTTT Sbjct: 777 ATATG-TGCTCAG-GCAGTTATTTT 799 >U21933 Xenopus laevis high mobility group protein-1 (HMG-1) mRNA, complete Length = 1552 Plus Strand HSPs: Score = 673 (101.0 bits), Expect = 1.6e-60, Sum P(3) = 1.6e-60 Identities = 231/312 (74%), Positives = 231/312 (74%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAA-GCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAG 2223 GAG A A GAAA G TG TGCAGCA A A GG G AAG C GAA A GCAA Sbjct: 510 GAGAAATATGAAAAGGATGTTGCAGCATATAGGGCTAAGGGAAAGCCAGAACCA-GCAA- 567 Query: 2224 AAAAAGA---AGGAAGAGGAGGAAGATGAGGAAGATGAAG-AGGATGAGGAGGAGGAGGA 2279 AAAAAG AG A AG GAA A G AAGA GAAG AGGA GAGGA GAGGA GA Sbjct: 568 AAAAAGCTCCAGCCA-AGCCAGAAAAAGCC-AAGAAGAAGGAGGAGGAGGATGAGGATGA 625 Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGC 2339 GATGA GAAGA GA GATGA GAAGAAGA GA GA GA GAA A G TG T T CG Sbjct: 626 TGATGAGGAAGAAGATGATGAGGAAGAAGACGAAGAGGAGGAAGAGGATGATGATGACGA 685 Query: 2340 A---GTTTTTTTTT---TCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTC 2393 A GT TTTT T TTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTC Sbjct: 686 ATAAGTCTTTTGGAAAATTTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTC 745 Query: 2394 CTTTTAAA-GAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAG 2452 CTTT AAA GAAAAAAA AAAT TAA GCTGTGTAAGATTTG TTTTAA CTGTACAG Sbjct: 746 CTTTAAAAAGAAAAAAA---AAATATAATGCTGTGTAAGATTTGATTTTAA-CTGTACAG 801 Query: 2453 TGTCTTT-TTTTGTATAGTT 2471 T TC T TTTTGT T TT Sbjct: 802 TCTCCCTGTTTTGTTTTTTT 821 Score = 587 (88.1 bits), Expect = 3.8e-56, Sum P(3) = 3.8e-56 Identities = 241/365 (66%), Positives = 241/365 (66%), Strand = Plus / Plus Query: 2217 AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGA 2276 AAG AAGAA AG AGGA GA GAGGA GATGA GA GA GAAGA GATGAGGA GA GA Sbjct: 597 AAG-AAGAAGGAGGAGGAGGATGAGGATGATGATGAGGAAGAAGATGATGAGGAAGAAGA 655 Query: 2277 GGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGA-TGATGATGAATAAGTTGGTTCTA 2335 GAAGA GA GAAGA GA GATGA GA GAA A G T TG AAT T T A Sbjct: 656 CGAAGAGGAGGAAGAGGATGATGATGACGAATAAGTCTTTTGGAAAATTTTGTCTATAAA 715 Query: 2336 GCGCAGTTTTTTTTTTCTTGTCTA-TAAAGCATTTAACCCCCCTGTACACAACTCACTCC 2394 GC T T T C A T A C TTTAA A A A T A T C Sbjct: 716 GCATT-TAACCCCCCTGTACACAACTCACTCCTTTAAAAAGAAAAAAAAAATATAA-TGC 773 Query: 2395 TTTTAAAGAAAAAAATTGAAATGTA-AGGCTG--TGTAA-GATTTGTTTTTAAACTGTA- 2449 T T AAGA A TT AA TGTA AG CT TGT G TTT TTTTT T T Sbjct: 774 TGTGTAAGATTTGATTTTAACTGTACAGTCTCCCTGTTTTGTTTTTTTTTTCTTGTTTTT 833 Query: 2450 -CAGTGTCT-TT-TTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGT 2506 C T T TT TTTTGTATAGTTAACACACTACCGAATGTGTCT AG TAG CCTGT Sbjct: 834 TCCCTTTTAATTATTTTGTATAGTTAACACACTACCGAATGTGTCT--AGCTAGTCCTGT 891 Query: 2507 CCTG--GTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAAT 2564 C T GTGGT TT T AAT GCCACTAACCTTGCCT TACAGTA GGGGTTGTAAA Sbjct: 892 CTTATAGTGGTTTTGTTAATTGCCACTAACCTTGCCTCTTACAGTAAAGGGGTTGTAAAC 951 Query: 2565 TGGCATGGAA 2574 TGGCATGG A Sbjct: 952 TGGCATGGGA 961 Score = 585 (87.8 bits), Expect = 1.6e-60, Sum P(3) = 1.6e-60 Identities = 145/176 (82%), Positives = 145/176 (82%), Strand = Plus / Plus Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 TTC GC TTCTTC T TTCTGCTCTGA T CGCCCAAAAAT AAAGG GA CA CC GG Sbjct: 350 TTCAGCATTCTTCTTGTTCTGCTCTGACTTCCGCCCAAAAATAAAAGGGGAGCACCCAGG 409 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089 G C ATTGG GAT T GC AA AAACTGGGAGAGATGTGGAATAACACTGCT CAGA Sbjct: 410 TTCGACTATTGGAGATATAGCAAAAAAACTGGGAGAGATGTGGAATAACACTGCTACAGA 469 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAG-GCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 TGACAA C GCC TATGAA GAAG GCTGC AAGCTGAAGGA AAATA GAAAAGG Sbjct: 470 TGACAAACTGCCCTATGAAC-GAAGAGCTGCCAAGCTGAAGGAGAAATATGAAAAGG 525 Score = 534 (80.1 bits), Expect = 1.6e-60, Sum P(3) = 1.6e-60 Identities = 126/150 (84%), Positives = 126/150 (84%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ||||| ||||| |||||||||||||| ||||| |||||||| |||||||| | |||||| Sbjct: 57 ATGGGTAAAGGTGATCCTAAGAAGCCAAGAGGAAAAATGTCCTCATATGCTTACTTTGTG 116 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 ||||| || | || ||||| ||||| |||||||| ||||| || || || || ||||| Sbjct: 117 CAAACATGCAGAGAAGAGCACAAGAAAAAGCACCCTGATGCCTCTGTAAATTTTGCAGAG 176 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 ||||||||||| |||||||| ||||||||| Sbjct: 177 TTTTCTAAGAAATGCTCAGAAAGGTGGAAG 206 Score = 507 (76.1 bits), Expect = 2.5e-59, Sum P(3) = 2.5e-59 Identities = 159/207 (76%), Positives = 159/207 (76%), Strand = Plus / Plus Query: 289 TAAATGTTACA-ACTTAAACTTACAAAT--TAATTATTTTGTA-GACCATGTCTGCTAAA 344 TAAAT TT CA A TT CT A AAAT T A A TG A GAC ATGTCT AA Sbjct: 163 TAAATTTTGCAGAGTTTT-CTAAGAAATGCTCAGAAAGGTGGAAGACTATGTCT---AAG 218 Query: 345 GAGAAAGGAAAA-TTTGAAGATATGGCAAAAGCGGACAAGGCCCGTTATGAAAGAGAAAT 403 GA AAAG AAA TTTGAAGATATGGCAAAAGC GACAA G CG TATGA AG GAAAT Sbjct: 219 GA-AAAGACAAAGTTTGAAGATATGGCAAAAGCCGACAAAGTTCGCTATGAGAGGGAAAT 277 Query: 404 GAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACC 463 GAAAA TATAT CC CCCAAAGG GA ACAAAAAAGA GTTCAAGGA CC AATGCACC Sbjct: 278 GAAAAGTTATATTCCACCCAAAGGAGAAACAAAAAAGAGGTTCAAGGACCCTAATGCACC 337 Query: 464 CAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 AAGAG CC CC T AG AT CTT C TGTT T Sbjct: 338 AAAGAGACCACCTTCAGCATTCTT-CTTGTTCT 369 Score = 149 (22.4 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36 Identities = 215/353 (60%), Positives = 215/353 (60%), Strand = Plus / Plus Query: 1309 TTTTTTTGACTAAAATGTAATCAGACT-CAGACAAAGGCT-G-T-GTACA-T-TTATGTT 1362 TT TTTTG TA A T TAA CA ACT C GA G CT G T GT C T TTAT T Sbjct: 844 TTATTTTG--TATAGT-TAA-CACACTACCGAATGTGTCTAGCTAGTCCTGTCTTATAGT 899 Query: 1363 GGTTTTGTTATTCCCCAGTATC-TTGAAG-TT-CATGAAAATGTTGGTAGTCA-CTT-CA 1417 GGTTTTGTTA T CCA TA C TTG TT CA G AAA G GGT GT A CT CA Sbjct: 900 GGTTTTGTTAATTGCCACTAACCTTGCCTCTTACA-GTAAAGG--GGTTGTAAACTGGCA 956 Query: 1418 AGTCAAAAATGAGCATTTTCAAATGGCTTGGCATACAGTACAAAAACAGGCTAGACAAAG 1477 G A A T AGCA T AAATG TT G ACAG CAAAA AGG T A G Sbjct: 957 TGGGAGTA-T-AGCAGGT--AAATG--TTCGTGCACAGC-CAAAATTAGGTTGTATGGGG 1009 Query: 1478 TAATATAGGCTATATTTTTCTTAGTCA--TATCCTGAAA-CAT--TTAT-GTTCTTTTC- 1530 TA T TAG T T TTTTT T TCA T TC TG A CAT TT T GTTCT TT Sbjct: 1010 TA-TGTAGTTTTTGTTTTTTATCTTCAGTTGTCTTGCATTCATAATTGTTGTTCTGTTAA 1068 Query: 1531 CTTTAGAT-ACTCAAAAAACCACAGCATCACTAAGTTAAA-TT-ACAAGTCTGCTGCTCT 1587 CT A A ACTC AA CA A CAC AGTT TT ACA TCTG T CT Sbjct: 1069 CTGAATACCACTCTGTAATTG-CAAAA-CACCGAGTTTTTGTTGACAT-TCTGATTG-CT 1124 Query: 1588 GTCCAGTAAATTAATAAGATTAAGGAAATCTA-TAACTCTTATAGTTCAGTAAATTGAAA 1646 TCC T TT T A ATT G A CT TAA T ATA CA T TT AA Sbjct: 1125 -TCCGATGTTTTGTTGACATTCTG-ATTGCTTCTAAGTAAAATA---CATTTTTTTTAAT 1179 Query: 1647 TATTAAATACTT-AAT 1661 TA AAA A TT AAT Sbjct: 1180 TAAAAAACATTTTAAT 1195 >J02895 Pig non-histone chromosomal protein (HMG2) mRNA, complete cds. Length = 1153 Plus Strand HSPs: Score = 526 (78.9 bits), Expect = 1.2e-59, Sum P(4) = 1.2e-59 Identities = 138/175 (78%), Positives = 138/175 (78%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGC 1030 TC GCCTTCTTCCT TT TGCTCTGA ATCGCCCAAA ATCAAA G GAACA CCTGGC Sbjct: 441 TCTGCCTTCTTCCTGTTTTGCTCTGAACATCGCCCAAAGATCAAAAGTGAACACCCTGGC 500 Query: 1031 CTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAA-CACTGCTGCAGA 1089 T TCCATTGG GAT TGC AAGAAA TGGG GA ATGTGG T A CA T C GC A Sbjct: 501 TTATCCATTGGGGATACTGCAAAGAAATTGGGTGAAATGTGGTCTGAGCAGT-CAGCCAA 559 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 GA AA CA CC TATGAA AGAA GC GC AAGCT AAGGAAAAATA GAAAAGG Sbjct: 560 AGATAAACAACCGTATGAACAGAAAGCAGCTAAGCTAAAGGAAAAATATGAAAAGG 615 Score = 471 (70.7 bits), Expect = 1.2e-59, Sum P(4) = 1.2e-59 Identities = 119/150 (79%), Positives = 119/150 (79%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ||||| || || || || || |||||| | ||||| ||||| || || || || || ||| Sbjct: 144 ATGGGGAAGGGCGACCCCAACAAGCCGCGGGGCAAGATGTCCTCGTACGCCTTCTTCGTG 203 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || ||||||||||| |||||||| ||||| ||| | || ||||||||| | ||| Sbjct: 204 CAGACCTGCCGGGAGGAGCACAAGAAGAAACACCCCGATTCCTCGGTCAACTTCGCCGAG 263 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 || || ||||||||||| ||| | |||||| Sbjct: 264 TTCTCCAAGAAGTGCTCCGAGCGATGGAAG 293 Score = 436 (65.4 bits), Expect = 1.2e-59, Sum P(4) = 1.2e-59 Identities = 132/172 (76%), Positives = 132/172 (76%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAA-TTTGAAGATATGGCAAAAGCGGACAA 382 T G AGAC ATGTCTGC AA GA AAAG AA TTTGAAGATATGGCAAAA GACAA Sbjct: 288 TGGAAGACTATGTCTGCCAAGGA-AAAGTCCAAGTTTGAAGATATGGCAAAAAGTGACAA 346 Query: 383 GGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAG-- 440 GC CG TATGA G GA ATGAAAA TA TCCCTCCCAA GGG GACAA AA G Sbjct: 347 AGCTCGCTATGACCGGGAGATGAAAAATTACGTCCCTCCCAA-GGGT-GACAAGAAGGGC 404 Query: 441 AAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 AAG AA GATCCCAATGC CCCAA AGGCCTCC T G T CTT CCTGTTTT Sbjct: 405 AAGAAAAAAGATCCCAATGCTCCCAAAAGGCCTCCATCTGCCTTCTT-CCTGTTTT 459 Score = 436 (65.4 bits), Expect = 1.2e-59, Sum P(4) = 1.2e-59 Identities = 148/208 (71%), Positives = 148/208 (71%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATATTGCTGCATA CG GC AA GG AAG TGA GCAG AAA AAGGG TG C Sbjct: 612 AAGGATATTGCTGCATACCGTGCCAAGGGTAAGGGTGAAGCAGGAAAGAAGGGCCCTGGC 671 Query: 2206 AAGGCTGAAAAAAGC-AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 A GGC A A C AAGAA AAGAA GAA GA GA GA GAGGAAGA GAAGAGGA Sbjct: 672 A-GGCCAACAGGCTCTAAGAAGAAGAATGAACCAGAAGATGAGGAGGAAGAGGAAGAGGA 730 Query: 2265 TGAGGAGGAGGAGGA--AG-ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GA GA GA GA GA AG A GAAGAAGATGAAGATGA GAA AA ATG AT TG Sbjct: 731 GGAAGAAGATGAAGACGAGGAGGAAGAAGATGAAGATGAGGAATAA-ATGGCTATCCTGT 789 Query: 2322 ATAAGTTGGTTCTAGCGCAGTTTTTTTTTTCT 2353 A A GTTG T T G G GT T T T T CT Sbjct: 790 A-ATGTTGTGTGTGGAGT-GTGTGTGTGTGCT 819 >D84418 Rat mRNA for chromosomal protein HMG2, complete cds. Length = 1072 Plus Strand HSPs: Score = 517 (77.6 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58 Identities = 137/175 (78%), Positives = 137/175 (78%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGC 1030 TC GCCTTCTTCCT TT TGCTCTGA ATCGCCCAAA ATCAAA G GAACA CC GGC Sbjct: 372 TCTGCCTTCTTCCTGTTTTGCTCTGAACATCGCCCAAAGATCAAAAGTGAACACCCCGGC 431 Query: 1031 CTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAA-CACTGCTGCAGA 1089 CTGTC ATTGG GAT TGC AAGAAACTGGG GAGATGTGG T A CA T CTGC A Sbjct: 432 CTGTCTATTGGAGATACTGCAAAGAAACTGGGGGAGATGTGGTCTGAGCAAT-CTGCCAA 490 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 GA AA CA CC TATGA AGAA GC GC AA CT AAGGA AA TA GAAAAGG Sbjct: 491 AGATAAACAACCGTATGAGCAGAAAGCAGCTAAACTAAAGGAGAAGTATGAAAAGG 546 Score = 462 (69.3 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58 Identities = 118/150 (78%), Positives = 118/150 (78%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||||||| || || || || |||||| | ||||| ||||| || || || || || ||| Sbjct: 75 ATGGGCAAGGGGGACCCCAACAAGCCGCGGGGCAAGATGTCCTCGTACGCCTTCTTCGTG 134 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || ||||||||||| ||||||||||| || || | || ||||||||| | ||| Sbjct: 135 CAGACCTGCCGGGAGGAGCACAAGAAGAAGCATCCCGACTCGTCGGTCAACTTCGCCGAG 194 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 || || ||||| || || ||||| |||||| Sbjct: 195 TTCTCGAAGAAATGTTCGGAGAGATGGAAG 224 Score = 445 (66.8 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58 Identities = 133/172 (77%), Positives = 133/172 (77%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAA-TTTGAAGATATGGCAAA-AGCGGACA 381 T G AGACCATGTCTGC AA GA AAAG AA TTTGA GAT TGGC AA AGCG ACA Sbjct: 219 TGGAAGACCATGTCTGCCAAGGA-AAAGTCGAAGTTTGAGGATTTGGCCAAGAGCG-ACA 276 Query: 382 AGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGA 441 A GC CGTTATGA AG GA ATGAA A CTAT T CCTCCCAAAGG GA A A AAA GA Sbjct: 277 AAGCTCGTTATGACAGGGAGATGAAGAACTATGTTCCTCCCAAAGGTGATA-AGAAAGGA 335 Query: 442 A-GTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 A G AA GATCC AATGC CCCAAGAG CC CCGT G T CTT CCTGTTTT Sbjct: 336 AAGAAAAAAGATCCAAATGCTCCCAAGAGACCACCGTCTGCCTTCTT-CCTGTTTT 390 Score = 412 (61.8 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58 Identities = 198/302 (65%), Positives = 198/302 (65%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATATTGCTGCATA CG GC AA GG AA TGA G AG AAA AAGGG TG Sbjct: 543 AAGGATATTGCTGCATACCGTGCCAAGGGCAAAAGTGAAGTAGGAAAGAAGGGTCCTGGT 602 Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 A GGC AA A GC AA AAGAAG A GA GAAGATGAGGAAGA GA GAGGA Sbjct: 603 A-GGCC-AACAG-GCTCAAAGAAGAAGAATGAACCAGAAGATGAGGAAGAGGAGGAGGAG 659 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG-ATGATGAA-T 2323 GA GA GA GA GAAGATGAAGA GA GAAGATGA GA GAAGA A G AT TG T Sbjct: 660 GAAGAAGATGATGAAGATGAAGAGGAGGAAGATGAGGATGAAGAATAAGTATC-TGTCCT 718 Query: 2324 AA-GT-TGGT-TCTA-GCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTG 2379 AA GT TGG T TA G GC TT T TTG CTA AA T AA C TG Sbjct: 719 AAAGTGTGGAGTATATGTGCTCAGGCAATTATTTTG-CTAAGAATG-TGAAATTCAAGTG 776 Query: 2380 TA-CACAAC-TCA-CTCCTTT-TAAAGAAAAAAATTGAAAT--GTAAGGCTGTGTAAGAT 2433 A C CAAC T A CT C T TAAA AA A GA T GTA GCTG T AGAT Sbjct: 777 CAGCTCAACATTAGCTTCAGTATAAA-AACTGTACAGATTTTTGTATAGCTGA-TGAGAT 834 Query: 2434 TTGTTTTTAAA 2444 T TTT TA A Sbjct: 835 TC-TTTGTAGA 844 >X62534 H.sapiens HMG-2 mRNA Length = 1301 Plus Strand HSPs: Score = 526 (78.9 bits), Expect = 2.4e-58, Sum P(4) = 2.4e-58 Identities = 138/175 (78%), Positives = 138/175 (78%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGC 1030 TC GCCTTCTTCCT TT TGCTCTGA ATCGCCCAAA ATCAAA G GAACA CCTGGC Sbjct: 512 TCTGCCTTCTTCCTGTTTTGCTCTGAACATCGCCCAAAGATCAAAAGTGAACACCCTGGC 571 Query: 1031 CTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAA-CACTGCTGCAGA 1089 CT TCCATTGG GAT TGC AAGAAA TGGG GA ATGTGG T A CA T C GC A Sbjct: 572 CTATCCATTGGGGATACTGCAAAGAAATTGGGTGAAATGTGGTCTGAGCAGT-CAGCCAA 630 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 GA AA CA CC TATGAA AGAA GC GC AAGCT AAGGA AAATA GAAAAGG Sbjct: 631 AGATAAACAACCATATGAACAGAAAGCAGCTAAGCTAAAGGAGAAATATGAAAAGG 686 Score = 471 (70.7 bits), Expect = 2.4e-58, Sum P(4) = 2.4e-58 Identities = 119/150 (79%), Positives = 119/150 (79%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ||||| |||||||| || || |||||| | ||||||||||| || || || || || ||| Sbjct: 215 ATGGGTAAAGGAGACCCCAACAAGCCGCGGGGCAAAATGTCCTCGTACGCCTTCTTCGTG 274 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || ||||| ||||| |||||||| ||||| || |||| ||||| ||| | || Sbjct: 275 CAGACCTGCCGGGAAGAGCACAAGAAGAAACACCCGGACTCTTCCGTCAATTTCGCGGAA 334 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 || || |||||||| || ||||| |||||| Sbjct: 335 TTCTCCAAGAAGTGTTCGGAGAGATGGAAG 364 Score = 448 (67.2 bits), Expect = 2.4e-58, Sum P(4) = 2.4e-58 Identities = 128/172 (74%), Positives = 128/172 (74%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGC AA GAGAA AA TTTGAAGATATGGCAAAA GACAA Sbjct: 359 TGGAAGACCATGTCTGCAAAGGAGAAGTCGAAGTTTGAAGATATGGCAAAAAGTGACAAA 418 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GC CG TATGA AG GA ATGAAAA TA T CCTCCCAAAGG GA A AA GAAG Sbjct: 419 GCTCGCTATGACAGGGAGATGAAAAATTACGTTCCTCCCAAAGGTGATAAGAAGGGGAAG 478 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 AAGGA CCCAATGC CC AA AGGCC CC T G T CTT CCTGTTTT Sbjct: 479 AAAAAGGACCCCAATGCTCCTAAAAGGCCACCATCTGCCTTCTT-CCTGTTTT 530 Score = 412 (61.8 bits), Expect = 2.4e-58, Sum P(4) = 2.4e-58 Identities = 122/166 (73%), Positives = 122/166 (73%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATATTGCTGCATATCG GC AA GG AA TGA GCAG AAA AAGGG TG C Sbjct: 683 AAGGATATTGCTGCATATCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGCCCTGGC 742 Query: 2206 AAGGCTGAAAAAAGCAA-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 A GGC A A CAA GAA AAGAA GAA GA GA GA GAGGA GA GA GA GA Sbjct: 743 A-GGCCAACAGGCTCAAAGAAGAAGAACGAACCAGAAGATGAGGAGGAGGAGGAGGAAGA 801 Query: 2265 TGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATG 2311 GA GA GA GA GA GA GAAGA GATGAAGATGAAGAA AA ATG Sbjct: 802 AGAAGATGAAGATGAGGAGGAAGAGGATGAAGATGAAGAATAA-ATG 847 Score = 294 (44.1 bits), Expect = 4.0e-53, Sum P(4) = 4.0e-53 Identities = 110/160 (68%), Positives = 110/160 (68%), Strand = Plus / Plus Query: 2170 AAAGGAAAGC-CTG-ATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAA 2227 AAAGGA A CTG AT G AA GG A GT AAG GAAA AAG G Sbjct: 682 AAAGGATATTGCTGCATATCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGG--GCCCT 739 Query: 2228 AGAAGG--AAGAGGAGGAA-GATGAGGAA-GATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 G AGG AA AGG AA GA GA GAA GA AGA GATGAGGAGGAGGAGGA GA Sbjct: 740 GGCAGGCCAACAGGCTCAAAGAAGAAGAACGAACCAGAAGATGAGGAGGAGGAGGAGGAA 799 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GAAGAAGATGAAGATGA GA GAAGA GATGA GATGAA AA Sbjct: 800 GAAGAAGATGAAGATGAGGAGGAAGAGGATGAAGATGAAGAA 841 Score = 285 (42.8 bits), Expect = 1.0e-52, Sum P(4) = 1.0e-52 Identities = 115/169 (68%), Positives = 115/169 (68%), Strand = Plus / Plus Query: 2170 AAAGGAAAGC-CTG-ATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAA 2227 AAAGGA A CTG AT G AA GG A GT AAG GAAA AAG G Sbjct: 682 AAAGGATATTGCTGCATATCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGG--GCCCT 739 Query: 2228 AGAAGG--AAGAGGAGGAA-GATGAGGAA-GATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 G AGG AA AGG AA GA GA GAA GA AGA GATGAGGAGGAGGAGGA GA Sbjct: 740 GGCAGGCCAACAGGCTCAAAGAAGAAGAACGAACCAGAAGATGAGGAGGAGGAGGAGGAA 799 Query: 2284 GAAGAAGATGAAGATGA--AG-AAGAAGATGATGATGATGAATAAGTTGGT 2331 GAAGAAGATGAAGATGA AG AAGA GATGA GATGA GAATAA T G T Sbjct: 800 GAAGAAGATGAAGATGAGGAGGAAGAGGATGAAGATGAAGAATAAATGGCT 850 >D14314 Chicken mRNA for HMG-1, complete cds. Length = 740 Plus Strand HSPs: Score = 483 (72.5 bits), Expect = 7.2e-58, Sum P(4) = 7.2e-58 Identities = 135/175 (77%), Positives = 135/175 (77%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGG-AGAACATCCTGG 1029 TC G CTTCTTCCT TTCTGCTC GAGT CGCCC AA ATCAA A AA A CCTGG Sbjct: 309 TCTGGCTTCTTCCTATTCTGCTCAGAGTTCCGCCCCAAGATCAAGTCCACAA-ACCCTGG 367 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACA-CTGCTGCAG 1088 C T TCCATTGG GA GT GC AAGAA CT GG GA ATGTGGAA AAC C G TG G Sbjct: 368 CATATCCATTGGGGACGTAGCAAAGAAGCTTGGTGAAATGTGGAACAACCTCAG-TGATG 426 Query: 1089 ATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 TGA AAGCAGCC TAT A AA AAGGCTGC AAGCTGAAGGA AA TACGA AAGG Sbjct: 427 GTGAAAAGCAGCCCTATAACAATAAGGCTGCTAAGCTGAAGGAGAAGTACGAGAAGG 483 Score = 471 (70.7 bits), Expect = 7.2e-58, Sum P(4) = 7.2e-58 Identities = 121/150 (80%), Positives = 121/150 (80%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGG AAAGG GA CC AAGAAGCC A GGCAA ATGTC C TATGC TT TTTGTG Sbjct: 21 ATGGCTAAAGGTGACCCGAAGAAGCCCAAGGGCAAGATGTCTGCCTATGCCTTCTTTGTG 80 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CA AC TG CG GAGGAGCA AAGAAGAA CCCAGA G T C GTCAACTT CAGAG Sbjct: 81 CAGACGTGCCGTGAGGAGCACAAGAAGAA---CCCAGAGGTTCCTGTCAACTTTGCAGAG 137 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 TT TCTAAGAAGTGCTCAGAGAGGTGGAAG Sbjct: 138 TTCTCTAAGAAGTGCTCAGAGAGGTGGAAG 167 Score = 360 (54.0 bits), Expect = 7.2e-58, Sum P(4) = 7.2e-58 Identities = 124/172 (72%), Positives = 124/172 (72%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCT-GCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAA 382 T G AGACCATGTC GC AA GAGAA G AAATTTGA GA ATGGCAAA GC GA AA Sbjct: 162 TGGAAGACCATGTCAAGC-AAGGAGAAGGCTAAATTTGATGAAATGGCAAAGGCTGATAA 220 Query: 383 GGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAA 442 GG CG TA GA AGAGAAATGAA CTAT CCC C AA GG G G CAA AA GAA Sbjct: 221 GGTACGATACGATAGAGAAATGAAGGACTATGGCCCAGCTAAGGGTG-G-CAAGAA-GAA 277 Query: 443 GTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 G AAGGA CCCAATGC CC AAG G CC CCGT G T CTT CCT TT T Sbjct: 278 G---AAGGACCCCAATGCCCCAAAGCGACCACCGTCTGGCTTCTT-CCTATTCT 327 Score = 310 (46.5 bits), Expect = 7.2e-58, Sum P(4) = 7.2e-58 Identities = 110/153 (71%), Positives = 110/153 (71%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAG-CTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAGGAT TTGC G TA C AG CTAAAGGAAAG TGATG GCAAA GGGAG G Sbjct: 479 GAAGGATGTTGCAGACTA-CAAGTCTAAAGGAAAGTTTGATGGCGCAAA---GGGAGCGG 534 Query: 2204 TCAAGGCTGAAAAAAGCAAG-AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 CAA C AAA GC G AAAAAG GA GA GAGGA GA GAGGA GA GA GA Sbjct: 535 -CAAC-C--AAAGCTGCTCGGAAAAAGGTAGAGGAAGAGGACGAAGAGGAGGAGGAGGAT 590 Query: 2263 GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGA 2297 GA GA GAGGAGGA GAAGATGA GA GA GAA A Sbjct: 591 GAAGAAGAGGAGGATGAAGATGATGATGACGAATA 625 Score = 260 (39.0 bits), Expect = 1.2e-55, Sum P(4) = 1.2e-55 Identities = 88/123 (71%), Positives = 88/123 (71%), Strand = Plus / Plus Query: 2193 AAAGGGA-GTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGG 2251 AAAGG A GTT T A GGC G AAA G G AA AA G G GGAA A AGG Sbjct: 504 AAAGGAAAGTT-TGATGGC-GCAAAGGGAGCGGCAACCAAAGCTGCTC-GGAAAA--AGG 558 Query: 2252 AAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATG 2311 AGA GAAGAGGA GA GAGGAGGAGGA GATGAAGAAGA GA GATGAAGA GA GATG Sbjct: 559 TAGAGGAAGAGGACGAAGAGGAGGAGGAGGATGAAGAAGAGGAGGATGAAGATGATGATG 618 Query: 2312 ATGA 2315 A GA Sbjct: 619 ACGA 622 Score = 243 (36.5 bits), Expect = 6.7e-55, Sum P(4) = 6.7e-55 Identities = 103/164 (62%), Positives = 103/164 (62%), Strand = Plus / Plus Query: 2172 AGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 A GA AAG TG TGCAG A AAG G AAG TGA GCAA A AG Sbjct: 475 ACGAGAAGGATGTTGCAGACTACAAGTCTAAAGGAAAGTTTGATGGC-GCAA-AGGGAGC 532 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 G AA AG G T G AA A G AGAGGA GAGGA GA GAGGA GA GA GA G Sbjct: 533 GGCAACCAAAGCT-GCTCGGAAAAAGGTAGAGGAAGAGGACGAAGAGGAGGAGGAGGATG 591 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTA 2335 A GAAGA GA GA GAAGATGATGATGA GAATAA GT CTA Sbjct: 592 AAGAAGAGGAGGATGAAGATGATGATGACGAATAAAACTGTACTA 636 >L32859 Rainbow trout HMG-1 gene exons 2-5, complete cds. Length = 3882 Plus Strand HSPs: Score = 542 (81.3 bits), Expect = 2.9e-54, Sum P(4) = 2.9e-54 Identities = 134/159 (84%), Positives = 134/159 (84%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGG AAAG ATCC A GAAGCCGAG GGCAA ATGTC TC TATGC T TTTGT Sbjct: 1277 ATGGGGAAAG---ATCCAAGGAAGCCGAGGGGCAAGATGTCCTCCTATGCCTACTTTGTC 1333 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CA AC TGTCGGGAGGAGCA AAGAAGAA CACCCAGA GCTTC GTCAACTTCTCAGAG Sbjct: 1334 CAGACCTGTCGGGAGGAGCACAAGAAGAAACACCCAGAAGCTTCCGTCAACTTCTCAGAG 1393 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAG-AGGG 159 TT TC AAGAAGTGCTC GAGAG TGGAAGGTAAG A GG Sbjct: 1394 TTCTCCAAGAAGTGCTCTGAGAGATGGAAGGTAAGTATGG 1433 Score = 497 (74.6 bits), Expect = 2.9e-54, Sum P(4) = 2.9e-54 Identities = 141/181 (77%), Positives = 141/181 (77%), Strand = Plus / Plus Query: 968 AGTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATC-GCCCAAAAATCAAAGGAGA-ACATC 1025 AG TC GC TTCTTC TCTTCTGC CTGA T TC G CC A T AA GG GA AC C Sbjct: 2298 AGGTCTGCGTTCTTCATCTTCTGCGCTGACT-TCAGACCCCAGGTGAAGGGGGAGACC-C 2355 Query: 1026 CTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTG-CT 1084 C GGCCTGTC AT GGTGATGT GC AAGAA CTGGGAGAGA GTGGAA AAC CT C Sbjct: 2356 CGGGCCTGTCTATCGGTGATGTGGCCAAGAAGCTGGGAGAGAAGTGGAACAAC-CTAACA 2414 Query: 1085 GCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAG 1144 GC GA GACAAG CC TATGA AAGAAGGCT C AAGCTGAAGGA AA TACGA AAG Sbjct: 2415 GCGGAGGACAAGGTACCCTATGAGAAGAAGGCTTCCAAGCTGAAGGAGAAGTACGAGAAG 2474 Query: 1145 GTAA 1148 GTAA Sbjct: 2475 GTAA 2478 Score = 494 (74.1 bits), Expect = 2.9e-54, Sum P(4) = 2.9e-54 Identities = 206/315 (65%), Positives = 206/315 (65%), Strand = Plus / Plus Query: 328 AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAGGCCC 387 AGACCATGTCTGC AA GAGAA GG AA TTTGA GAT TGGC AAA GGACAAGG C Sbjct: 1845 AGACCATGTCTGCCAAGGAGAAGGGGAAGTTTGAGGATCTGGCCAAACTGGACAAGGTGC 1904 Query: 388 GTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAGTTCA 447 G TATGA AG GA ATGA A CTA AT CCTCCCAA GG GAGA AA AAGA GTTCA Sbjct: 1905 GATATGAGAGGGAGATGAGGAGCTACATTCCTCCCAAGGGAGAGAAGAAGAAGAGGTTCA 1964 Query: 448 AGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTATCTTGCCTGTTTTTACTTCCCAGAC 507 AGGA CCCAA GC CCCAAGAG CC CGTGAGTA CT GCCTG A CAG C Sbjct: 1965 AGGACCCCAACGCCCCCAAGAGACCATCGTGAGTA-CT-GCCTGACAGAAAAAGACAGTC 2022 Query: 508 ACGTTTTACAGTAGAATCTGAGAGAA-ATTTAGCA-AGCTACTT-TGTCA-GTTTAG-AG 562 A T T C C A G AT T CA AG C T T T A GT A A Sbjct: 2023 ATCTCTCCCCCCCCCCCCCCATGGCTCATGTCTCAGAGAAGCATGTCTAAAGTAAATTAA 2082 Query: 563 TGTAA-ATGTACAATCA-AAGTTTCTTAGCTA-ATACTTG-TTCATATTGG-TTATATTT 617 TG AA A TAC AT A AA T T A C A A AC TG TT ATTGG TTA ATTT Sbjct: 2083 TGAAATAATTACTATAATAAAATAATGAACAATAAACGTGATTGGAATTGGATTACATTT 2142 Query: 618 AAATAGTATAAAATTCCTG 636 AATA A A AA T CTG Sbjct: 2143 GAATAA-A-ACAACTACTG 2159 Score = 298 (44.7 bits), Expect = 2.9e-54, Sum P(4) = 2.9e-54 Identities = 194/310 (62%), Positives = 194/310 (62%), Strand = Plus / Plus Query: 2102 AATCTTTTTTTCTTCCCTACTGTTTTATC-CTCCCTTTGCTTTGGAAGGATATTGCTGCA 2160 AA TTTTT T TT TA T TT TA CTC C TT T T AGGA AT CTGC Sbjct: 2931 AAAATTTTTATTTTTTTTATTTTTATAAATCTCTCCTTATTCTC--AGGACATCACTGCG 2988 Query: 2161 TATCG-AGCTAAAGGAAAGCCTGATG--CAGCAAAAAAGGGA-GTT-GTCAAGGCTGAAA 2215 TA CG A C AA GG AAG TG G CAGCA AG GA G G C C G A Sbjct: 2989 TACCGCAAC-AAGGGTAAGG-TGCCGGTCAGCATGCCAGCGAAGGCCGCCGCACCCGCCA 3046 Query: 2216 AAAGCAA-GAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGG 2272 A C A GA A GA G GA GA GA GA GATGA GA GA GA GA GATGA GA G Sbjct: 3047 AGGACGACGACGACGACGACGATGACGACGACGATGATGAGGACGACGATGATGACGACG 3106 Query: 2273 AGGAGGAAGATGAAGAAGATGAA-GATGAAGAAGAAGATGA-TGATGATGAATAA-GTTG 2329 A GAGGA GA GA G AGAT A G TG A G A A A T A A GA TA GTTG Sbjct: 3107 ATGAGGATGACGA-GTAGATTACCGTTGTT-ACGTATAGCACTTACAA-GATTACCGTTG 3163 Query: 2330 GTTC-TAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACT 2388 T C TA GCA TT T T CTTGT TATAAAGCATTTAACCCCCC CAC C Sbjct: 3164 TTACGTATAGCACTTACAATGT-CTTGTTTATAAAGCATTTAACCCCCCCCC-CACC-C- 3219 Query: 2389 CACTCCTTTTAAAGAAAAAAATT 2411 C CTC TT TA A A AA A TT Sbjct: 3220 C-CTC-TTGTACACACAACACTT 3240 >L13805 Homo sapiens (clone 06) high mobility group 1 protein mRNA Length = 273 Plus Strand HSPs: Score = 1335 (200.3 bits), Expect = 2.0e-53, P = 2.0e-53 Identities = 271/273 (99%), Positives = 271/273 (99%), Strand = Plus / Plus Query: 2268 GGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGT 2327 GGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGT Sbjct: 1 GGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGT 60 Query: 2328 TGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAAC 2387 TGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAAC Sbjct: 61 TGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAAC 120 Query: 2388 TCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTG 2447 TCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTG Sbjct: 121 TCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTG 180 Query: 2448 TACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTC 2507 TACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTC Sbjct: 181 TACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTC 240 Query: 2508 CTGGTGGTATTTT-CAATAGCCACT-AACCTTG 2538 CTGGTGGTATTTT CAATAGCCACT AACCTTG Sbjct: 241 CTGGTGGTATTTTGCAATAGCCACTGAACCTTG 273 Score = 315 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06 Identities = 173/273 (63%), Positives = 173/273 (63%), Strand = Plus / Plus Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA-TA 2324 GAGGAGGAGGA GA GA GAAGA GA GA GA GAAGAAGA GATGATGATGA AA T Sbjct: 2 GAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTT 61 Query: 2325 AGTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCC-TGTACA 2383 GTT C GC TTTTTTTT T T T TA AA TT A CCCCC T ACA Sbjct: 62 GGTTCTAGC--GCAGTTTTTTTTTTCTTGTCTATA-AAGCATTTAACCCCCCTGTACACA 118 Query: 2384 CAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGC-TGTGTAAGATTTGTTTTTA 2442 C C C C TTT AA AAAAAA T AA A G TGT A T T TTTT A Sbjct: 119 ACTCACTC-CTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGT-TTTTAA 176 Query: 2443 AAC-TGTACAGTGTCTTTTTTTGTATAGTTA-ACAC-ACT-ACCGAATGTGTCTTTAGAT 2498 A T A GT T TTTTT T TA T A ACAC AC A G T T T TAG Sbjct: 177 ACTGTACAGTGTCTTTTTTTGTATAGT-TAACACACTACCGAATGTGTCTTTAGATAGCC 235 Query: 2499 A-GCCCTGTCCTGGTGGTATTTTCAATAGCCACT-AACCTTG 2538 G CCTG TGGT T TTT CAATAGCCACT AACCTTG Sbjct: 236 CTGTCCTGG--TGGTA-T-TTTGCAATAGCCACTGAACCTTG 273 Score = 211 (31.7 bits), Expect = 0.097, P = 0.093 Identities = 51/62 (82%), Positives = 51/62 (82%), Strand = Plus / Plus Query: 2232 GGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGA 2291 ||| |||||||||||||| ||||||||||| || || || || || || |||||| ||| Sbjct: 1 GGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGT 60 Query: 2292 TG 2293 || Sbjct: 61 TG 62 Score = 196 (29.4 bits), Expect = 0.47, P = 0.37 Identities = 48/59 (81%), Positives = 48/59 (81%), Strand = Plus / Plus Query: 2241 GGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATG 2299 ||| || |||||||||||||| ||||| || || || |||||||| || |||||| | | Sbjct: 1 GGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 59 Score = 185 (27.8 bits), Expect = 1.5, P = 0.77 Identities = 49/64 (76%), Positives = 49/64 (76%), Strand = Plus / Plus Query: 2250 GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGA 2309 ||| || || || ||||| || || || || || ||||||||||| ||||| ||| ||| Sbjct: 1 GGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGT 60 Query: 2310 TGAT 2313 || | Sbjct: 61 TGGT 64 Score = 180 (27.0 bits), Expect = 2.5, P = 0.92 Identities = 48/63 (76%), Positives = 48/63 (76%), Strand = Plus / Plus Query: 2254 GATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGAT 2313 || || ||||| || || || || |||||||||||||| || ||||| || ||| | | | Sbjct: 2 GAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTT 61 Query: 2314 GAT 2316 | | Sbjct: 62 GGT 64 >U31513 Ambystoma mexicanum high mobility group protein-2 (HMG-2) mRNA, Length = 1048 Plus Strand HSPs: Score = 498 (74.7 bits), Expect = 9.4e-53, Sum P(4) = 9.4e-53 Identities = 122/150 (81%), Positives = 122/150 (81%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ||||| ||||||||||| || ||||| | ||||| ||||| || || || | |||||| Sbjct: 19 ATGGGTAAAGGAGATCCGAACAAGCCCCGGGGCAAGATGTCGTCCTACGCCTACTTTGTG 78 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || |||||||||||||||||||||||||| || || || || |||||| | ||| Sbjct: 79 CAGACGTGCCGGGAGGAGCATAAGAAGAAGCACCCGGACGCCTCCGTAAACTTCGCCGAG 138 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 || ||||| |||||||| || |||||||| Sbjct: 139 TTCTCTAAAAAGTGCTCCGAACGGTGGAAG 168 Score = 420 (63.0 bits), Expect = 9.4e-53, Sum P(4) = 9.4e-53 Identities = 130/175 (74%), Positives = 130/175 (74%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATG GC AA GAGAA GG AA TT GAAGA ATGGC AAAG GGA AA Sbjct: 163 TGGAAGACCATGAACGCAAAGGAGAAGGGCAAGTTCGAAGACATGGCTAAAGGGGATAAA 222 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAA---AAG 440 G CGTTATGA GAGA ATGAAA C TAT T CC CC AAAGG GAGAC AA AAG Sbjct: 223 GTTCGTTATGACCGAGAGATGAAATCTTATGTACCACCGAAAGGCGAGACGAAGGGCAAG 282 Query: 441 AAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGT--GAGTATCTTGCCTGTTTT 495 AA AAGGATCCCAATGCACCCAAGAG C CCGT G GT TCTT CCT TT T Sbjct: 283 AAAAAGAAGGATCCCAATGCACCCAAGAGACTACCGTCCGCGT-TCTT-CCTCTTCT 337 Score = 408 (61.2 bits), Expect = 9.4e-53, Sum P(4) = 9.4e-53 Identities = 126/173 (72%), Positives = 126/173 (72%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGG-AAAGCCTGATGCAGCAAAAAAGGGAGTTGT 2204 AAGGA ATTGC GCATA CG GC AA GG AAAG TGATG G AAA AA G A TG Sbjct: 493 AAGGACATTGCAGCATACCGTGCAAAGGGTAAAGT-TGATGTGGGAAAGAAAGCACCTGG 551 Query: 2205 CAAGGCTGAAAAA--AGCAA-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA 2261 A G C G A A AGCAA GAAAAAG GAA GAGGA GATGAGGA GA GA GA Sbjct: 552 TAGGCCGGCAGTAGCAGCAAAGAAAAAGGTAGAACCAGAGGATGATGAGGACGACGAGGA 611 Query: 2262 GGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 GGATGAGGAGGA GA GAAGA GA GA GA GA GA GA GAAGA GATGATGA Sbjct: 612 GGATGAGGAGGAAGACGAAGAGGAGGACGACGAGGAAGATGAAGAGGATGATGA 665 Score = 408 (61.2 bits), Expect = 9.4e-53, Sum P(4) = 9.4e-53 Identities = 134/187 (71%), Positives = 134/187 (71%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGG-AAAGCCTGATGCAGCAAAAAAGGGAGTTGT 2204 AAGGA ATTGC GCATA CG GC AA GG AAAG TGATG G AAA AA G A TG Sbjct: 493 AAGGACATTGCAGCATACCGTGCAAAGGGTAAAGT-TGATGTGGGAAAGAAAGCACCTGG 551 Query: 2205 CAAGGCTGAAAAAAGCAAGAAA-AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 A GGC G A AGCA AAA AA AAGG AGA GA GATGA GA GA GA GAGG Sbjct: 552 TA-GGCCGGCAGTAGCAGCAAAGAAAAAGGTAGAACCAGAGGATGATGAGGACGACGAGG 610 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 A GGA GAGGAGGAAGA GAAGA GA GA GA GA GAAGA GA GA GATGATGAAT Sbjct: 611 A---GGATGAGGAGGAAGACGAAGAGGAGGACGACGAGGAAGATGAAGAGGATGATGAAT 667 Query: 2324 AAGTTGGTT 2332 AA TT TT Sbjct: 668 AACTTTATT 676 Score = 379 (56.9 bits), Expect = 9.4e-53, Sum P(4) = 9.4e-53 Identities = 125/178 (70%), Positives = 125/178 (70%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGC 1030 TC GC TTCTTCCTCTTCTG TC GA ATCGCC AA AT AA G GA CC GG Sbjct: 319 TCCGCGTTCTTCCTCTTCTGTTCGGAACATCGCCTCAAGATTAAGGCCGACTGCCCGGGA 378 Query: 1031 CTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGAT 1090 CTGTCCATTGGTGAT GCGAA AAA T GGAGAGA GTGG A AC G GC GA Sbjct: 379 CTGTCCATTGGTGATACGGCGAAAAAATTAGGAGAGAAGTGGTCGGA-ACAGACGCCGAA 437 Query: 1091 -GACAAGCAGCCTT-AT--GAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 GACAA CC T AT GAA AGAA GC GC AA CT AA GA AAATA GAAAAGG Sbjct: 438 AGACAAAATTCCATCATTCGAACAGAAAGCGGCAAAACTCAAAGAGAAATATGAAAAGG 496 >M83665 Human high mobility group 2 protein (HMG-2) gene, complete cds. Length = 4341 Plus Strand HSPs: Score = 576 (86.4 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52 Identities = 332/512 (64%), Positives = 332/512 (64%), Strand = Plus / Plus Query: 917 ATTTGTTTTTGTGATCTGTTAACTTAAAATCCTAAAATTAATTTTTTT--TTT-AGTTCG 973 ATT T TTG GAT T TT CTT A T T AAA T TT TT TTT AG TC Sbjct: 2270 ATTGCTCCTTG-GATTT-TTC-CTTCAGTTTATTAAACTCTGTTGCTTCCTTTCAGATCT 2326 Query: 974 GCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTG 1033 GCCTTCTTCCT TT TGCTCTGA ATCGCCCAAA ATCAAA G GAACA CCTGGCCT Sbjct: 2327 GCCTTCTTCCTGTTTTGCTCTGAACATCGCCCAAAGATCAAAAGTGAACACCCTGGCCTA 2386 Query: 1034 TCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAA-CACTGCTGCAGATGA 1092 TCCATTGG GAT TGC AAGAAA TGGG GA ATGTGG T A CA T C GC A GA Sbjct: 2387 TCCATTGGGGATACTGCAAAGAAATTGGGTGAAATGTGGTCTGAGCAGT-CAGCCAAAGA 2445 Query: 1093 CAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGGTAAGAAG 1152 AA CA CC TATGAA AGAA GC GC AAGCT AAGGA AAATA GAAAAGGTA A G Sbjct: 2446 TAAACAACCATATGAACAGAAAGCAGCTAAGCTAAAGGAGAAATATGAAAAGGTAC-A-G 2503 Query: 1153 TGTGGGTTTGCTTGGTAAAATGATG-ACAAGTAC--GCCAGATGTA-TGATTGTACTTAG 1208 TGT TT TT TAAA TG A AAG AC G A A GTA T A TGTA A Sbjct: 2504 TGTCATCTTT-TT--TAAAGCCGTGGATAAG-ACTAGGTATAGGTAATAACTGTAGAAAA 2559 Query: 1209 TTTGAGGTGTAATAAGTTTTTAGGGTAACAGCTACAT-TAAG-TATGGTGTTGATATAAG 1266 TG GG A T AGTT T GTA A T T T AG TATG T TTGA A AAG Sbjct: 2560 CCTG-GGAA-ATTTAGTTAATCTTGTATTAA-TGGTTGTCAGCTATGTT-TTGA-A-AAG 2613 Query: 1267 TCCTCATCCT--TCAAAGAATGCAGAGGACCAAATAAATTAGGGTTT--TTTTGACT-AA 1321 CCT AT T A A T CA A AC A TAA T A TT TTTTGACT AA Sbjct: 2614 GCCTAATGAAAATTGTACACTTCA-AC-ACAAGGTAATTGAAACCTTCCTTTTGACTGAA 2671 Query: 1322 A--A-TGTAATCAG-ACTCAGACAAAGGCTGTGTACAT--TTAT-GTTGGTTTT-GTTAT 1373 A A TGT AG ACT AG A CTG ACA TT T GTT TT T GTTAT Sbjct: 2672 ACCAGTGTTTGTAGCACT-AGTATATTCCTGCAGACAGACTTGTAGTTACTTGTAGTTAT 2730 Query: 1374 TCCCCAGTATCTTGAAGTTCATGAAAATGTTGGTAGTCACTTCA-AGTCAAAAA 1426 T AGT T T A GT C TG A T TT T T A A AGTCAAA A Sbjct: 2731 TGTATAGTCTGTATA-GT-C-TGTTATTTTTTTTTTTAAGCAGAGAGTCAAAGA 2781 Score = 487 (73.1 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52 Identities = 123/155 (79%), Positives = 123/155 (79%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ||||| |||||||| || || |||||| | ||||||||||| || || || || || ||| Sbjct: 1669 ATGGGTAAAGGAGACCCCAACAAGCCGCGGGGCAAAATGTCCTCGTACGCCTTCTTCGTG 1728 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || ||||| ||||| |||||||| ||||| || |||| ||||| ||| | || Sbjct: 1729 CAGACCTGCCGGGAAGAGCACAAGAAGAAACACCCGGACTCTTCCGTCAATTTCGCGGAA 1788 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAG 155 || || |||||||| || ||||| |||||||| || Sbjct: 1789 TTCTCCAAGAAGTGTTCGGAGAGATGGAAGGTGAG 1823 Score = 438 (65.7 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52 Identities = 118/156 (75%), Positives = 118/156 (75%), Strand = Plus / Plus Query: 328 AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAGGCCC 387 ||||||||||||| || ||||| || |||||||||||||||||| ||||| || | Sbjct: 2102 AGACCATGTCTGCAAAGGAGAAGTCGAAGTTTGAAGATATGGCAAAAAGTGACAAAGCTC 2161 Query: 388 GTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAGTTCA 447 | ||||| || || ||||||| || | ||||||||||| || | || |||| | Sbjct: 2162 GCTATGACAGGGAGATGAAAAATTACGTTCCTCCCAAAGGTGATAAGAAGGGGAAGAAAA 2221 Query: 448 AGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT 483 |||| |||||||| || || ||||| |||| ||| | Sbjct: 2222 AGGACCCCAATGCTCCTAAAAGGCCACCGTAAGTTT 2257 Score = 432 (64.8 bits), Expect = 1.6e-38, Sum P(3) = 1.6e-38 Identities = 492/839 (58%), Positives = 492/839 (58%), Strand = Plus / Plus Query: 1473 CAAAGTAATATAGGCTATATTTT-TCTTAGTCA-T-ATCCTGAAACATTTATGTTCTTTT 1529 CAAAG AAT T GG A AT T TCT AG CA T A CC AAA AT A C T T Sbjct: 2403 CAAAGAAAT-TGGGTGAAATGTGGTCTGAG-CAGTCAGCC--AAAGATAAACAACCATAT 2458 Query: 1530 CCTTTAGATACTCAAAAAACC-ACAGCATCACTAAGTTAAATTACAAGTCTGCTGCTCTG 1588 AGA A CA AA C A AG A A TA G AA TACA GT T T T T Sbjct: 2459 GAAC-AGAAAG-CAGCTAAGCTAAAGGAGAAATATGAAAAGGTACA-GTGTCATCTTTTT 2515 Query: 1589 TCCAGTAAATTAATAAGATTAAGGAAATCTA-TAACTCTTATAGTTCAGT-AAATTGAAA 1646 T AG T ATAAGA TA G A A TA TAACT T A C G AAATT A Sbjct: 2516 TAAAGCCG-TGGATAAGACTAGGTATAGGTAATAACTGTAGAAAACCTGGGAAATTTAGT 2574 Query: 1647 TATTAAA-TACTTAAT--TT-TCAGCTTTAGTCATTCTGAAAAGTGTTTATTTCTAGATG 1702 TA T TA TTAAT TT TCAGCT T GT TT TGAAAAG G TA T A TG Sbjct: 2575 TAATCTTGTA-TTAATGGTTGTCAGCTAT-GT--TT-TGAAAAG-GCCTAATGAAAATTG 2628 Query: 1703 TTT-CTT-AAC-C----TAATTGCATG-TT--TATTGACAAATTACCTTTTTTTTTTAAG 1752 T CTT AAC C TAATTG A TT T TTGAC A ACC T TTT T A Sbjct: 2629 TACACTTCAACACAAGGTAATTGAAACCTTCCTTTTGACTGAA-ACCAGTGTTTGT-AGC 2686 Query: 1753 ACCAC-AT-TTCCTACTAAGGATTAAGGTCTGACAGTGTAAACCTGTAGAGTGCTTTTTT 1810 AC A AT TTCCT C AG A A T TG AGT TA C TGTAG T T T T Sbjct: 2687 ACTAGTATATTCCTGC--AG-ACAGAC-T-TGT-AGT-TA--CTTGTAGT-TATTGTATA 2736 Query: 1811 GCATTCAGAAGGTGGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAA-T 1869 G T A A TG A T T T TTTAA CA AG TC A T GTTTTA T Sbjct: 2737 GTCTGTATAGTCTGTTATTTTTTTT--TTTAAGCAGAGAGTCAAAGAAATTGTTTTATGT 2794 Query: 1870 AGAG-T-TAGGATCTG-GTAGATAATTGCACCTCAATGAGGCA-TAACTTTGCAAATATT 1925 AGA T TA A TG G AG TA G C ATG GCA T T TG A TA Sbjct: 2795 AGATATATATAAAATGTGAAGGTACAGGAGGGACTATG--GCACTGTGTGTG-ATGTAAA 2851 Query: 1926 AGACTAT-GCCATTTCATG-AGTTATAGAT-TGTTATAATGATC-TTGTATTTTTATGTT 1981 AG TAT G A T A G A T ATA TGT AT A C TTGT TTTTA GT Sbjct: 2852 AGGGTATTGGTAGTGAAAGTACTGATACTGCTGT-ATCGCAACCCTTGTCATTTTACGT- 2909 Query: 1982 CATTTATTGAAGTTCTAGT-TATTTCTGGAGTTGCTGTGGAT-CTACAGATACGTGATAT 2039 CATT A T GTT AG TA T A TGCT T A CT AGA GT A T Sbjct: 2910 CATTAACTT--GTTAAAGCCTAGTGGGATAAGTGCTCTAAAAACTT-AGACTGGTTACCT 2966 Query: 2040 TTTGGTATAACTAGAATCTTGATT--TCTTTCATAA-AG-TTCTGC-CATGTTC-TATTT 2093 TTT A A TA A T ATT TC TCAT AG TT T CA T T TT Sbjct: 2967 TTTTAGACAGTTATTAGGGTTATTGGTCAATCATCTTAGATTGTTTACAACTAAGTGGTT 3026 Query: 2094 CTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGGATAT 2153 TTTC T T T T CC A TG TTTAT T T T AGGATAT Sbjct: 3027 -TTTCACAGTTGAGTAATGATACCGGA-TGCTTTATTTTTTTGACAATATTTCAGGATAT 3084 Query: 2154 TGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGA 2213 TGCTGCATATCG GC AA GG AA TGA GCAG AAA AAGGG TG CA GGC A Sbjct: 3085 TGCTGCATATCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGCCCTGGCA-GGCCAA 3143 Query: 2214 AAAAAGCAA-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGG 2272 A CAA GAA AAGAA GAA GA GA GA GAGGA GA GA GA GA GA GA G Sbjct: 3144 CAGGCTCAAAGAAGAAGAACGAACCAGAAGATGAGGAGGAGGAGGAGGAAGAAGAAGATG 3203 Query: 2273 AGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATG 2311 A GA GA GA GAAGA GATGAAGATGAAGAA AA ATG Sbjct: 3204 AAGATGAGGAGGAAGAGGATGAAGATGAAGAATAA-ATG 3241 Score = 292 (43.8 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52 Identities = 98/135 (72%), Positives = 98/135 (72%), Strand = Plus / Plus Query: 2194 AAGGG-AGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGG--AAGAGGAGGAA-GATGA 2249 AAGGG A GT AAG GAAA AAG G G AGG AA AGG AA GA GA Sbjct: 3101 AAGGGCAAAAGTGAAGCAGGAAAGAAGG--GCCCTGGCAGGCCAACAGGCTCAAAGAAGA 3158 Query: 2250 GGAA-GATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAG 2308 GAA GA AGA GATGAGGAGGAGGAGGA GA GAAGAAGATGAAGATGA GA GAAG Sbjct: 3159 AGAACGAACCAGAAGATGAGGAGGAGGAGGAGGAAGAAGAAGATGAAGATGAGGAGGAAG 3218 Query: 2309 ATGATGATGATGAATAA 2325 A GATGA GATGAA AA Sbjct: 3219 AGGATGAAGATGAAGAA 3235 Score = 283 (42.5 bits), Expect = 4.5e-52, Sum P(4) = 4.5e-52 Identities = 103/144 (71%), Positives = 103/144 (71%), Strand = Plus / Plus Query: 2194 AAGGG-AGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGG--AAGAGGAGGAA-GATGA 2249 AAGGG A GT AAG GAAA AAG G G AGG AA AGG AA GA GA Sbjct: 3101 AAGGGCAAAAGTGAAGCAGGAAAGAAGG--GCCCTGGCAGGCCAACAGGCTCAAAGAAGA 3158 Query: 2250 GGAA-GATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGA--AG-AAG 2305 GAA GA AGA GATGAGGAGGAGGAGGA GA GAAGAAGATGAAGATGA AG AAG Sbjct: 3159 AGAACGAACCAGAAGATGAGGAGGAGGAGGAGGAAGAAGAAGATGAAGATGAGGAGGAAG 3218 Query: 2306 AAGATGATGATGATGAATAAGTTGGT 2331 A GATGA GATGA GAATAA T G T Sbjct: 3219 AGGATGAAGATGAAGAATAAATGGCT 3244 >X63463 G.gallus HMG2a mRNA Length = 1073 Plus Strand HSPs: Score = 507 (76.1 bits), Expect = 4.3e-51, Sum P(4) = 4.3e-51 Identities = 123/150 (82%), Positives = 123/150 (82%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||| ||||| || || |||||||| | ||||| ||||| | ||||| || |||||| Sbjct: 61 ATGGCTAAAGGTGACCCGAAGAAGCCCAAGGGCAAGATGTCTGCCTATGCCTTCTTTGTG 120 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || || |||||||| ||||||||| ||||||| | | | |||||||| ||||| Sbjct: 121 CAGACGTGCCGTGAGGAGCACAAGAAGAAGAACCCAGAGGTTCCTGTCAACTTTGCAGAG 180 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 || ||||||||||||||||||||||||||| Sbjct: 181 TTCTCTAAGAAGTGCTCAGAGAGGTGGAAG 210 Score = 492 (73.8 bits), Expect = 4.3e-51, Sum P(4) = 4.3e-51 Identities = 136/175 (77%), Positives = 136/175 (77%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGG-AGAACATCCTGG 1029 TC GCCTTCTTCCT TTCTGCTC GAGT CGCCC AA ATCAA A AA A CCTGG Sbjct: 352 TCTGCCTTCTTCCTATTCTGCTCAGAGTTCCGCCCCAAGATCAAGTCCACAA-ACCCTGG 410 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACA-CTGCTGCAG 1088 C T TCCATTGG GA GT GC AAGAA CT GG GA ATGTGGAA AAC C G TG G Sbjct: 411 CATATCCATTGGGGACGTAGCAAAGAAGCTTGGTGAAATGTGGAACAACCTCAG-TGATG 469 Query: 1089 ATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 TGA AAGCAGCC TAT A AA AAGGCTGC AAGCTGAAGGA AA TACGA AAGG Sbjct: 470 GTGAAAAGCAGCCCTATAACAATAAGGCTGCTAAGCTGAAGGAGAAGTACGAGAAGG 526 Score = 360 (54.0 bits), Expect = 4.3e-51, Sum P(4) = 4.3e-51 Identities = 124/172 (72%), Positives = 124/172 (72%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCT-GCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAA 382 T G AGACCATGTC GC AA GAGAA G AAATTTGA GA ATGGCAAA GC GA AA Sbjct: 205 TGGAAGACCATGTCAAGC-AAGGAGAAGGCTAAATTTGATGAAATGGCAAAGGCTGATAA 263 Query: 383 GGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAA 442 GG CG TA GA AGAGAAATGAA CTAT CCC C AA GG G G CAA AA GAA Sbjct: 264 GGTACGATACGATAGAGAAATGAAGGACTATGGCCCAGCTAAGGGTG-G-CAAGAA-GAA 320 Query: 443 GTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 G AAGGA CCCAATGC CC AAG G CC CCGT G T CTT CCT TT T Sbjct: 321 G---AAGGACCCCAATGCCCCAAAGCGACCACCGTCTGCCTTCTT-CCTATTCT 370 Score = 310 (46.5 bits), Expect = 4.3e-51, Sum P(4) = 4.3e-51 Identities = 110/153 (71%), Positives = 110/153 (71%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAG-CTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAGGAT TTGC G TA C AG CTAAAGGAAAG TGATG GCAAA GGGAG G Sbjct: 522 GAAGGATGTTGCAGACTA-CAAGTCTAAAGGAAAGTTTGATGGCGCAAA---GGGAGCGG 577 Query: 2204 TCAAGGCTGAAAAAAGCAAG-AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 CAA C AAA GC G AAAAAG GA GA GAGGA GA GAGGA GA GA GA Sbjct: 578 -CAAC-C--AAAGCTGCTCGGAAAAAGGTAGAGGAAGAGGACGAAGAGGAGGAGGAGGAT 633 Query: 2263 GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGA 2297 GA GA GAGGAGGA GAAGATGA GA GA GAA A Sbjct: 634 GAAGAAGAGGAGGATGAAGATGATGATGACGAATA 668 Score = 260 (39.0 bits), Expect = 6.9e-49, Sum P(4) = 6.9e-49 Identities = 88/123 (71%), Positives = 88/123 (71%), Strand = Plus / Plus Query: 2193 AAAGGGA-GTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGG 2251 AAAGG A GTT T A GGC G AAA G G AA AA G G GGAA A AGG Sbjct: 547 AAAGGAAAGTT-TGATGGC-GCAAAGGGAGCGGCAACCAAAGCTGCTC-GGAAAA--AGG 601 Query: 2252 AAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATG 2311 AGA GAAGAGGA GA GAGGAGGAGGA GATGAAGAAGA GA GATGAAGA GA GATG Sbjct: 602 TAGAGGAAGAGGACGAAGAGGAGGAGGAGGATGAAGAAGAGGAGGATGAAGATGATGATG 661 Query: 2312 ATGA 2315 A GA Sbjct: 662 ACGA 665 Score = 246 (36.9 bits), Expect = 2.9e-48, Sum P(4) = 2.9e-48 Identities = 136/232 (58%), Positives = 136/232 (58%), Strand = Plus / Plus Query: 2172 AGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 A GA AAG TG TGCAG A AAG G AAG TGA GCAA A AG Sbjct: 518 ACGAGAAGGATGTTGCAGACTACAAGTCTAAAGGAAAGTTTGATGGC-GCAA-AGGGAGC 575 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 G AA AG G T G AA A G AGAGGA GAGGA GA GAGGA GA GA GA G Sbjct: 576 GGCAACCAAAGCT-GCTCGGAAAAAGGTAGAGGAAGAGGACGAAGAGGAGGAGGAGGATG 634 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCAGTTTTTTTTT 2350 A GAAGA GA GA GAAGATGATGATGA GAATAA GT CTA GT T T T Sbjct: 635 AAGAAGAGGAGGATGAAGATGATGATGACGAATAAAACTGTACTATACTTGTCTCCATGT 694 Query: 2351 TCTTGTCTATAAAGCATTT-AACCCCCCTGTACACAACTCACTCCTTTTAAAGA 2403 T C ATA AG A AA C CC T A CA C C CTC T TT AGA Sbjct: 695 GAATACC-ATAGAGTAGGGGAAACACCGTAAATGCAGCAC-CTCTTATTTGAGA 746 >AF022465 Mus musculus high mobility group protein homolog HMG4 (Hmg4) mRNA, Length = 1502 Plus Strand HSPs: Score = 474 (71.1 bits), Expect = 3.7e-47, Sum P(4) = 3.7e-47 Identities = 134/175 (76%), Positives = 134/175 (76%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGG-AGAACATCCTGG 1029 TC G TT TTC T TTCTGCTCTGA T CGCCC AA ATCAAA A AA A CCTGG Sbjct: 319 TCTGGATTTTTCTTATTCTGCTCTGAATTCCGCCCCAAGATCAAATCCACAA-ACCCTGG 377 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTG-CAG 1088 C T TCCATTGG GATGT GC AA AA CTGGG GAGATGTGGAATAAC TG CA Sbjct: 378 CATCTCCATTGGAGATGTGGCAAAAAAGCTGGGTGAGATGTGGAATAACTTAAGTGACA- 436 Query: 1089 ATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 ATGA AAGCAGCCTTATG A AAGGC GC AAGCTGAAGGA AA TA GA AAGG Sbjct: 437 ATGAAAAGCAGCCTTATGTCACCAAGGCAGCAAAGCTGAAGGAGAAGTATGAGAAGG 493 Score = 444 (66.6 bits), Expect = 3.7e-47, Sum P(4) = 3.7e-47 Identities = 116/150 (77%), Positives = 116/150 (77%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||| ||||| || || ||||| || | ||||| ||||| | ||||| || |||||| Sbjct: 28 ATGGCTAAAGGTGACCCCAAGAAACCAAAGGGCAAGATGTCTGCTTATGCCTTCTTTGTG 87 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || |||| || ||||||||||| ||||||| | | | ||||| || | ||| Sbjct: 88 CAGACATGCAGGGAAGAACATAAGAAGAAAAACCCAGAGGTTCCCGTCAATTTTGCTGAG 147 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 || || ||||||||||| |||||||||||| Sbjct: 148 TTCTCCAAGAAGTGCTCGGAGAGGTGGAAG 177 Score = 376 (56.4 bits), Expect = 3.7e-47, Sum P(4) = 3.7e-47 Identities = 124/172 (72%), Positives = 124/172 (72%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCT-GCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAA 382 T G AGACCATGTCT GC AAAGAGAAA AAA TTTGA GA ATGGCAAA GC GA AA Sbjct: 172 TGGAAGACCATGTCTAGC-AAAGAGAAATCAAAGTTTGATGAAATGGCAAAGGCAGATAA 230 Query: 383 GGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAA 442 G CCG TATGA G GA ATGAAA TAT CC C AAAGG G G CAA AA GAA Sbjct: 231 AGTCCGATATGATCGGGAGATGAAAGATTATGGACCAGCTAAAGGAG-G-CAAGAA-GAA 287 Query: 443 GTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTATCTTGCCTGTTTT 495 G AAGGA CC AATGC CCCAA AG CCTCCGT G AT TT C T TT T Sbjct: 288 G---AAGGACCCAAATGCCCCCAAAAGACCTCCGTCTGGATTTTTCTTATTCT 337 Score = 332 (49.8 bits), Expect = 3.7e-47, Sum P(4) = 3.7e-47 Identities = 116/151 (76%), Positives = 116/151 (76%), Strand = Plus / Plus Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAG-CTAAAGGAAAGCCTGATGCAGCAAAAAAGGG 2198 T TG GAAGGAT TTGCTG TAT AG CTAAAGG AAG TGATG GC AA GGG Sbjct: 484 TATGAGAAGGATGTTGCTGACTATA-AGTCTAAAGGGAAGTTTGATGGTGCCAA---GGG 539 Query: 2199 AGTTG-TCAAG--GCT-GAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAG 2254 TG T AAG GC G AAAAAG GAA AAGA GGAAGAGGAGGA GA GAGGAAG Sbjct: 540 TCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAAGA-GGAAGAGGAGGAGGAAGAGGAAG 598 Query: 2255 ATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGA 2291 A A GAGGA GAGGA GAGGAGGAAGATGAA AA A Sbjct: 599 A--A-GAGGAGGAGGAAGAGGAGGAAGATGAATAAAA 632 Score = 250 (37.5 bits), Expect = 1.5e-43, Sum P(4) = 1.5e-43 Identities = 66/80 (82%), Positives = 66/80 (82%), Strand = Plus / Plus Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GAAAAAG GGAAGA GAGGAAGA GAGGA G GAAGAGGA GA GAGGAGGAGGAAGA Sbjct: 558 GAAAAAGGTGGAAGAAGAGGAAGAGGAGGA-G--GAAGAGGAAGAAGAGGAGGAGGAAGA 614 Query: 2283 TGAAGAAGATGAAGATGAAG 2302 GA GAAGATGAA A AAG Sbjct: 615 GGAGGAAGATGAATAA-AAG 633 Score = 213 (32.0 bits), Expect = 6.6e-42, Sum P(4) = 6.6e-42 Identities = 55/69 (79%), Positives = 55/69 (79%), Strand = Plus / Plus Query: 2248 GAGGAAGATG-AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGA 2306 GA AAG TG AAGA GA GA GAGGAGGAGGAAGA GAAGAAGA GA GA GAAGA GA Sbjct: 558 GAAAAAGGTGGAAGAAGAGGAAGAGGAGGAGGAAGAGGAAGAAGAGGAGGAGGAAGAGGA 617 Query: 2307 AGATGATGA 2315 GA GATGA Sbjct: 618 GGAAGATGA 626 >X02666 Trout mRNA for high mobility group protein HMG-T Length = 716 Plus Strand HSPs: Score = 516 (77.4 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45 Identities = 126/150 (84%), Positives = 126/150 (84%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGG AAAG ATCC A GAAGCCGAG GGCAA ATGTC TC TATGC T TTTGT Sbjct: 1 ATGGGGAAAG---ATCCAAGGAAGCCGAGGGGCAAGATGTCCTCCTATGCCTACTTTGTC 57 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CA ACT GTCGGGAGGAGCA AAGAAGAA CACCCAGA GCTTC GTCAACTTCTCAGAG Sbjct: 58 CAGACTCGTCGGGAGGAGCACAAGAAGAAACACCCAGAAGCTTCCGTCAACTTCTCAGAG 117 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 TT TC AAGAAGTGCTC GAGAG TGGAAG Sbjct: 118 TTCTCCAAGAAGTGCTCTGAGAGATGGAAG 147 Score = 459 (68.9 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45 Identities = 131/172 (76%), Positives = 131/172 (76%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGC AA GAGAA GG AA TTTGA GAT TGGC AAA GGACAAG Sbjct: 142 TGGAAGACCATGTCTGCCAAGGAGAAGGGGAAGTTTGAGGATCTGGCCAAACTGGACAAG 201 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 G CG TATGA AG GA ATGA A CTA AT CCTCCCAA GG GAGA AA AAGA G Sbjct: 202 GTGCGATATGAGAGGGAGATGAGGAGCTACATTCCTCCCAAGGGAGAGAAGAAGAAGAGG 261 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGT--GAGTATCTTGCCTGTTTT 495 TTCAAGGA CCCAA GC CCCAAGAG CC CGT G GT TCTT C T TT T Sbjct: 262 TTCAAGGACCCCAACGCCCCCAAGAGACCATCGTCCGCGT-TCTT-CATCTTCT 313 Score = 322 (48.3 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45 Identities = 158/241 (65%), Positives = 158/241 (65%), Strand = Plus / Plus Query: 2171 AAGGAAAGC-CTGA-TGCAGCAAAAAAGGGA-GTTGTCAAGGCTGAAAAAAGCAAGAAAA 2227 AAGGA A C CTG T C GCAA AA GG A G TG C GG T A A GC AG AA Sbjct: 466 AAGGACATCACTGCGTACCGCAACAAGGGTAAGGTGCC--GG-TCAGCAT-GCCAGCGAA 521 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 G G A G A A GA GA GA GA GA GATGA GA GA GA GA GATGA G Sbjct: 522 GGCCGCCGCACCCGCCA-AGGACGACGACGACGACGATGATGACGACGACGATGATGAGG 580 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGA-T-GAATAA-GTTGGTTC-TAGCGCAGTT 2343 A GA GA GATGA GA GA GA GATGA GA T GA TA GTTG T C TA GCA TT Sbjct: 581 ACGACGATGATGACGACGATGAGGATGACGAGTAGATTACCGTTGTTACGTATAGCACTT 640 Query: 2344 TTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAAAGA 2403 T T CTTGT TATAAAGCATTTAACCCCCC CAC C C CTC TT TA A A Sbjct: 641 ACAATGT-CTTGTTTATAAAGCATTTAACCCCCCCCC-CACC-C-C-CTC-TTGTACACA 694 Query: 2404 AAAAAATT 2411 AA A TT Sbjct: 695 CAACACTT 702 >Z17240 Homo sapiens for mRNA encoding HMG2B. Length = 1066 Plus Strand HSPs: Score = 526 (78.9 bits), Expect = 7.5e-43, Sum P(3) = 7.5e-43 Identities = 138/175 (78%), Positives = 138/175 (78%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGC 1030 TC GCCTTCTTCCT TT TGCTCTGA ATCGCCCAAA ATCAAA G GAACA CCTGGC Sbjct: 229 TCTGCCTTCTTCCTGTTTTGCTCTGAACATCGCCCAAAGATCAAAAGTGAACACCCTGGC 288 Query: 1031 CTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAA-CACTGCTGCAGA 1089 CT TCCATTGG GAT TGC AAGAAA TGGG GA ATGTGG T A CA T C GC A Sbjct: 289 CTATCCATTGGGGATACTGCAAAGAAATTGGGTGAAATGTGGTCTGAGCAGT-CAGCCAA 347 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 GA AA CA CC TATGAA AGAA GC GC AAGCT AAGGA AAATA GAAAAGG Sbjct: 348 AGATAAACAACCATATGAACAGAAAGCAGCTAAGCTAAAGGAGAAATATGAAAAGG 403 Score = 448 (67.2 bits), Expect = 7.5e-43, Sum P(3) = 7.5e-43 Identities = 128/172 (74%), Positives = 128/172 (74%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGACCATGTCTGC AA GAGAA AA TTTGAAGATATGGCAAAA GACAA Sbjct: 76 TGGAAGACCATGTCTGCAAAGGAGAAGTCGAAGTTTGAAGATATGGCAAAAAGTGACAAA 135 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443 GC CG TATGA AG GA ATGAAAA TA T CCTCCCAAAGG GA A AA GAAG Sbjct: 136 GCTCGCTATGACAGGGAGATGAAAAATTACGTTCCTCCCAAAGGTGATAAGAAGGGGAAG 195 Query: 444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495 AAGGA CCCAATGC CC AA AGGCC CC T G T CTT CCTGTTTT Sbjct: 196 AAAAAGGACCCCAATGCTCCTAAAAGGCCACCATCTGCCTTCTT-CCTGTTTT 247 Score = 403 (60.5 bits), Expect = 7.5e-43, Sum P(3) = 7.5e-43 Identities = 121/166 (72%), Positives = 121/166 (72%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATATTGCTGCATAT G GC AA GG AA TGA GCAG AAA AAGGG TG C Sbjct: 400 AAGGATATTGCTGCATATGGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGCCCTGGC 459 Query: 2206 AAGGCTGAAAAAAGCAA-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 A GGC A A CAA GAA AAGAA GAA GA GA GA GAGGA GA GA GA GA Sbjct: 460 A-GGCCAACAGGCTCAAAGAAGAAGAACGAACCAGAAGATGAGGAGGAGGAGGAGGAAGA 518 Query: 2265 TGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATG 2311 GA GA GA GA GA GA GAAGA GATGAAGATGAAGAA AA ATG Sbjct: 519 AGAAGATGAAGATGAGGAGGAAGAGGATGAAGATGAAGAATAA-ATG 564 Score = 294 (44.1 bits), Expect = 5.2e-38, Sum P(3) = 5.2e-38 Identities = 110/160 (68%), Positives = 110/160 (68%), Strand = Plus / Plus Query: 2170 AAAGGAAAGC-CTG-ATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAA 2227 AAAGGA A CTG AT G AA GG A GT AAG GAAA AAG G Sbjct: 399 AAAGGATATTGCTGCATATGGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGG--GCCCT 456 Query: 2228 AGAAGG--AAGAGGAGGAA-GATGAGGAA-GATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 G AGG AA AGG AA GA GA GAA GA AGA GATGAGGAGGAGGAGGA GA Sbjct: 457 GGCAGGCCAACAGGCTCAAAGAAGAAGAACGAACCAGAAGATGAGGAGGAGGAGGAGGAA 516 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GAAGAAGATGAAGATGA GA GAAGA GATGA GATGAA AA Sbjct: 517 GAAGAAGATGAAGATGAGGAGGAAGAGGATGAAGATGAAGAA 558 Score = 285 (42.8 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37 Identities = 115/169 (68%), Positives = 115/169 (68%), Strand = Plus / Plus Query: 2170 AAAGGAAAGC-CTG-ATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAA 2227 AAAGGA A CTG AT G AA GG A GT AAG GAAA AAG G Sbjct: 399 AAAGGATATTGCTGCATATGGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGG--GCCCT 456 Query: 2228 AGAAGG--AAGAGGAGGAA-GATGAGGAA-GATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 G AGG AA AGG AA GA GA GAA GA AGA GATGAGGAGGAGGAGGA GA Sbjct: 457 GGCAGGCCAACAGGCTCAAAGAAGAAGAACGAACCAGAAGATGAGGAGGAGGAGGAGGAA 516 Query: 2284 GAAGAAGATGAAGATGA--AG-AAGAAGATGATGATGATGAATAAGTTGGT 2331 GAAGAAGATGAAGATGA AG AAGA GATGA GATGA GAATAA T G T Sbjct: 517 GAAGAAGATGAAGATGAGGAGGAAGAGGATGAAGATGAAGAATAAATGGCT 567 >M83235 Gallus gallus non-histone chromosomal protein (HMG2) mRNA, complete Length = 1083 Plus Strand HSPs: Score = 472 (70.8 bits), Expect = 1.2e-40, Sum P(3) = 1.2e-40 Identities = 132/175 (75%), Positives = 132/175 (75%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGC 1030 TC GC TTCTTCCT TTCTG TC GA A CG CCAAAAATCAAA GA CATCC GGC Sbjct: 380 TCTGCATTCTTCCTTTTCTGTTCCGAACACCGTCCAAAAATCAAAAATGATCATCCCGGC 439 Query: 1031 CTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTG-CAGA 1089 TGTC AT GG GA GC AAGAA TGGG GA ATGTGG T A AC G TG C A Sbjct: 440 TTGTCTATCGGAGACACGGCAAAGAAGTTGGGTGAAATGTGGTCTGA-ACAGTTGGCCAA 498 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 GACAAGCA CC TATGAA AGAAGGCTGC AAGCT AAGGA AAATA GAAAAGG Sbjct: 499 AGACAAGCAACCCTATGAACAGAAGGCTGCAAAGCTAAAGGAGAAATATGAAAAGG 554 Score = 467 (70.1 bits), Expect = 1.2e-40, Sum P(3) = 1.2e-40 Identities = 147/205 (71%), Positives = 147/205 (71%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGGCAA GG GA CC AA AAGCCG G GGCAA ATGTC TC TA GC T TT GTG Sbjct: 83 ATGGGCAAGGGCGACCCCAACAAGCCGCGGGGCAAGATGTCCTCGTACGCGTACTTCGTG 142 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CA AC TG CG GAGGAGCA AAGAAGAAGCACCC GA C TCAGTCAACTTC C GAG Sbjct: 143 CAGACGTGCCGCGAGGAGCACAAGAAGAAGCACCCGGACTCGTCAGTCAACTTCGCCGAG 202 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGT 180 TT TC GAAGTGCTC GAG GGTGGAAG A GA G C A A A G AA A GG Sbjct: 203 TTCTCGCGGAAGTGCTCGGAGCGGTGGAAG--ACGATGTCC-AGCA-AGGAGAA-AGGGA 257 Query: 181 AATTAAAAGACAGTTTCCAATTGAG 205 A TT A GA A T CCAA GAG Sbjct: 258 AGTTCGAGGAGA-TGGCCAAGGGAG 281 Score = 405 (60.8 bits), Expect = 1.2e-40, Sum P(3) = 1.2e-40 Identities = 139/202 (68%), Positives = 139/202 (68%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATATTGC GCATATCG GC AA G AAG TGATGCAG AAAAAAGGG G Sbjct: 551 AAGGATATTGCAGCATATCGTGCCAAGAGCAAGAGTGATGCAGGAAAAAAGGGCCCAGGT 610 Query: 2206 AAGGCTGAAAAAAGCAAGAA-AAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 A G CTG A A AAGAA AAAG AG A AG AG A GA GAGGA GA GA GA GA Sbjct: 611 AGGCCTGCAGGATCTAAGAAGAAAGCAGAACCAGAAG-AGGAGGAGGAGGAGGAGGAAGA 669 Query: 2265 TGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATA 2324 TGAGGA GAGGAGGAAGA GAAGA GATGA GA AA A GAA TG TG T AA A Sbjct: 670 TGAGGAAGAGGAGGAAGAAGAAGAGGATGAGGAGTAA-ATGAATGCCCTGCTG-TAAAGA 727 Query: 2325 AGTTGGTTCTAGCGC-AGTTTTTT 2347 T G TC A C A T TTTT Sbjct: 728 TTTATGCTCGAAATCCAATATTTT 751 Score = 400 (60.0 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21 Identities = 144/205 (70%), Positives = 144/205 (70%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCT-GCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAA 382 T G AGAC ATGTC GC AA GAGAAAGG AA TT GA GA ATGGC AA G GACAA Sbjct: 227 TGGAAGACGATGTCCAGC-AAGGAGAAAGGGAAGTTCGAGGAGATGGCCAAGGGAGACAA 285 Query: 383 GGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAA 442 GC CG TA GA AG GA ATGAA A CTAT T CCTCCCAAAGG GAGA A AA GAA Sbjct: 286 AGCTCGCTACGACAGGGAGATGAAGAACTATGTTCCTCCCAAAGGAGAGA-AGAAGGGAA 344 Query: 443 -GTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTTTACTT 500 G AAGGA CCCAA GC CC AA AG CC CC T G AT CTT CCT TTT T TT Sbjct: 345 AGAAGAAGGACCCCAACGCTCCTAAAAGACCACCATCTGCATTCTT-CCT-TTTCTG-TT 401 Query: 501 CCCAGACAC-GTTTTACAGTAGAATCTGA 528 CC A ACAC GT A A T AA TGA Sbjct: 402 CCGA-ACACCGTCCAAAAATCAAAAATGA 429 >M80574 Gallus domesticus high-mobility group-2 protein (HMG-2) mRNA, Length = 995 Plus Strand HSPs: Score = 481 (72.2 bits), Expect = 1.7e-40, Sum P(3) = 1.7e-40 Identities = 133/175 (76%), Positives = 133/175 (76%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGC 1030 TC GC TTCTTCCT TTCTG TC GA A CG CCAAAAATCAAA GA CATCC GGC Sbjct: 397 TCTGCATTCTTCCTTTTCTGTTCCGAACACCGTCCAAAAATCAAAAATGATCATCCCGGC 456 Query: 1031 CTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAAT-AACACTGCTGCAGA 1089 TGTC AT GG GA GC AAGAA TGGG GA ATGTGG T AACA T C GC A Sbjct: 457 TTGTCTATCGGAGACACGGCAAAGAAGTTGGGTGAAATGTGGTCTGAACAGT-CGGCCAA 515 Query: 1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 GACAAGCA CC TATGAA AGAAGGCTGC AAGCT AAGGA AAATA GAAAAGG Sbjct: 516 AGACAAGCAACCCTATGAACAGAAGGCTGCAAAGCTAAAGGAGAAATATGAAAAGG 571 Score = 442 (66.3 bits), Expect = 1.7e-40, Sum P(3) = 1.7e-40 Identities = 146/205 (71%), Positives = 146/205 (71%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGGGCAA GG GA CC AA AAGCCG G GGCAA ATGTC TC TA GC T TT GTG Sbjct: 100 ATGGGCAAGGGCGACCCCAACAAGCCGCGGGGCAAGATGTCCTCGTACGCGTACTTCGTG 159 Query: 61 CAAACTTGTCGG-GAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGA 119 CA AC TG C G GAG AGCA AAGAAGAAGCACCC GA C TCAGTCAACTTC C GA Sbjct: 160 CAGACGTGCCCGCGAG-AGCACAAGAAGAAGCACCCGGACTCGTCAGTCAACTTCGCCGA 218 Query: 120 GTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGG 179 GTT TC GAAGTGCTC GAG GGTGGAAG A GA G C A A A G AA A GG Sbjct: 219 GTTCTCGCGGAAGTGCTCGGAGCGGTGGAAG--ACGATGTCC-AGCA-AGGAGAA-AGGG 273 Query: 180 TAATTAAAAGACAGTTTCCAATTGAG 205 A TT A GA A T CCAA GAG Sbjct: 274 AAGTTCGAGGAGA-TGGCCAAGGGAG 298 Score = 404 (60.6 bits), Expect = 1.7e-40, Sum P(3) = 1.7e-40 Identities = 140/202 (69%), Positives = 140/202 (69%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 AAGGATATTGC GCATATCG GC AA G AAG TGATGCAG AAAAAAGGG G Sbjct: 568 AAGGATATTGCAGCATATCGTGCCAAGAGCAAGAGTGATGCAGGAAAAAAGGGCCCAGGT 627 Query: 2206 AAGGCTGAAAAAAGCAAGAA-AAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 A G CTG A A AAGAA AAAG AG A AG AG A GA GAGGA GA GA GA GA Sbjct: 628 AGGCCTGCAGGATCTAAGAAGAAAGCAGAACCAGAAG-AGGAGGAGGAGGAGGAGGAAGA 686 Query: 2265 TGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAA-GATGATGATGATGAAT 2323 TGAGGA GAGGAGGAAGA GAAGA GATGA GA AA A GAA G TG TG T AA Sbjct: 687 TGAGGAAGAGGAGGAAGAAGAAGAGGATGAGGAGTAA-ATGAATGCCCGTGCTG-TAAAG 744 Query: 2324 AAGTTGGTTCTAGCGC-AGTTTTTT 2347 A T G TC A C A T TTTT Sbjct: 745 ATTTATGCTCGAAATCCAATGTTTT 769 Score = 400 (60.0 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21 Identities = 144/205 (70%), Positives = 144/205 (70%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCT-GCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAA 382 T G AGAC ATGTC GC AA GAGAAAGG AA TT GA GA ATGGC AA G GACAA Sbjct: 244 TGGAAGACGATGTCCAGC-AAGGAGAAAGGGAAGTTCGAGGAGATGGCCAAGGGAGACAA 302 Query: 383 GGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAA 442 GC CG TA GA AG GA ATGAA A CTAT T CCTCCCAAAGG GAGA A AA GAA Sbjct: 303 AGCTCGCTACGACAGGGAGATGAAGAACTATGTTCCTCCCAAAGGAGAGA-AGAAGGGAA 361 Query: 443 -GTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTTTACTT 500 G AAGGA CCCAA GC CC AA AG CC CC T G AT CTT CCT TTT T TT Sbjct: 362 AGAAGAAGGACCCCAACGCTCCTAAAAGACCACCATCTGCATTCTT-CCT-TTTCTG-TT 418 Query: 501 CCCAGACAC-GTTTTACAGTAGAATCTGA 528 CC A ACAC GT A A T AA TGA Sbjct: 419 CCGA-ACACCGTCCAAAAATCAAAAATGA 446 >L32954 Rainbow trout HMG-T2 gene exons 1-4, complete cds. Length = 1368 Plus Strand HSPs: Score = 693 (104.0 bits), Expect = 8.0e-40, Sum P(3) = 8.0e-40 Identities = 313/471 (66%), Positives = 313/471 (66%), Strand = Plus / Plus Query: 12 AGATCCTAAGAAGCCGAGAGGCAAA-ATGTCATCATATGCATTTTTTGT-GCAAACTTGT 69 AGATCCTAA AAGCCGA AGG AAA A TC TC TATGC TT TTTGT GC A C TG Sbjct: 41 AGATCCTAATAAGCCGA-AGGGAAAGACTTCTTCCTATGCGTTCTTTGTTGCGA-CGTGC 98 Query: 70 CGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAG 129 CGGGA GA CA AAGAA AA CACCCAG CTTCAGT AACTT TC GAGTT TC AAG Sbjct: 99 CGGGAAGAACACAAGAAAAAACACCCAGGAACTTCAGTGAACTTTTCCGAGTTCTCAAAG 158 Query: 130 AAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGTAATTAAAAG 189 AA TGCTCAGAGAGGTGGA GGTAAG CT A A A GC C G A TAAAAG Sbjct: 159 AAATGCTCAGAGAGGTGGAGGGTAAGTT--CTGACTA-A-GCGGCC--GCCATGTAAAAG 212 Query: 190 ACAGTTTCCAATTGAGGATGCAAAAAAAAGCCTAGTTGGCATTC-T-CGTAGTGGGACGC 247 GTTT G GG GCA A G A GC T C T CG A G GC Sbjct: 213 TT-GTTTTTTCCGGGGGG-GCAGAGGGCGGGGCAAA--GCGTGCCTACGAAACAGTTAGC 268 Query: 248 TATTACAT--AGCAAAAGACATTGGTTTTGAGGATAATTTA--CTTAAATGTTACAACTT 303 A T AT A CAAA G G TTT G G A AT A CT AATG A T Sbjct: 269 AAATCAATGTATCAAATGGTGGGGATTTAGCGCAACATGGATGCTGCAATG--AGTGGTG 326 Query: 304 AAACTTACAAATTAATTATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAG 363 ACT A A T T TTTT AGACCATGTCTGC AAAGAGAA G AA TTTGA G Sbjct: 327 TGACTAATGCAGTTTCTCTTTTCCAGACCATGTCTGCAAAAGAGAAGGTGAAGTTTGAGG 386 Query: 364 ATATGGCAAAAGCGGACAAGGCCCGTTATGA-AAGAGAAATGAAAACCTATATCCCTCCC 422 A ATGGC AA G GACAA G CCGTTATGA AAG GA ATGAA TAT T CC CCC Sbjct: 387 ACATGGCCAAGGGTGACAAAGTCCGTTATGACAAG-GACATGAAGGGTTATGTGCCCCCC 445 Query: 423 AAAGGGG---AGACAA-A--AAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCG 476 AA GG AG CA A AAAGA AAGGA CCCAATGC CCCAA AGGCC CCG Sbjct: 446 AAGGGATCTAAGGCAGCAGGAAAGAGAAAGAAGGACCCCAATGCCCCCAAAAGGCCACCG 505 Query: 477 TGAGTA 482 T AGTA Sbjct: 506 TAAGTA 511 Score = 407 (61.1 bits), Expect = 8.0e-40, Sum P(3) = 8.0e-40 Identities = 189/294 (64%), Positives = 189/294 (64%), Strand = Plus / Plus Query: 856 CCAATGCATCACAGAAATTCACAGGCAG--CTTTAAATAG-CAATGCAGTGTACACCTGA 912 CCAATGC C CA AA CAC G AG CT A TA CAA A TG A CTG Sbjct: 483 CCAATGCCCC-CAAAAGGCCACCGTAAGTACTCCACCTATACAACT-ATTG-ATTTCTG- 538 Query: 913 TAGTATTTGTTTTTGTGATCTGTTAACTTAAAATC--CTAAA-ATTAATTTTTTTTTTAG 969 TAG TT T TT GAT T AACT AA T CT AA ATT T T TAG Sbjct: 539 TAGCGTTC-TGTTCA-GATTTTGGAACTAAATGTGTTCTCAACATTC-TATCCCCAATAG 595 Query: 970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029 TTC GC TT TTC T TTCTG CTGA A CG AA AATCAA G GA A CC GG Sbjct: 596 TTCTGCATTTTTCGTGTTCTGTGCTGAACACCGTGGAAGAATCAAGGCTGATAACCCAGG 655 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTG-CTGCAG 1088 C TG CATTGG GA TTGC AAG A CTGGG G TGTGG AA C G CT C Sbjct: 656 CATGGGCATTGGAGACATTGCCAAGCAGCTGGGTTTGCTGTGGGGCAAG-CAGACTCCCA 714 Query: 1089 ATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGGTAA 1148 A GACAAGCAGCC A GAA AAGGC GC AAGCTGAAGGAAAA TA GA AAGGTAA Sbjct: 715 AAGACAAGCAGCCACACGAAGCAAAGGCCGCCAAGCTGAAGGAAAAGTATGAGAAGGTAA 774 Query: 1149 G 1149 G Sbjct: 775 G 775 Score = 203 (30.5 bits), Expect = 8.0e-40, Sum P(3) = 8.0e-40 Identities = 75/114 (65%), Positives = 75/114 (65%), Strand = Plus / Plus Query: 2173 GGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAA 2231 GG A GCC G TG G AA AAGG AG CA GG TGA A A A GA A GA Sbjct: 906 GGCAGGCCAGCTGTTGGCAAGAAGGCAGCGCCCATGGATGATGATGATGACGACGATGAT 965 Query: 2232 GGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 G A GA GAGGA GATGA GA GA GAAGAGGATGA GA GAGGA GA GA AA Sbjct: 966 G-ACGAAGAGGAGGATGATGACGAGGAAGAGGATGATGACGAGGATGATGACTAA 1019 >D30765 Xenopus laevis mRNA for HMG-X protein, complete cds. Length = 1081 Plus Strand HSPs: Score = 480 (72.0 bits), Expect = 4.4e-37, Sum P(3) = 4.4e-37 Identities = 120/150 (80%), Positives = 120/150 (80%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||||||| ||||||||||| ||||| | || || ||||| || || || | ||| ||| Sbjct: 105 ATGGGCAAGGGAGATCCTAACAAGCCTCGGGGGAAGATGTCCTCCTACGCCTATTTCGTG 164 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || |||||||||| |||||||||||||| || | || ||||||||||| || Sbjct: 165 CAGACCTGCAGGGAGGAGCACAAGAAGAAGCACCCGGACACCTCCGTCAACTTCTCCGAC 224 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 || || ||||| ||||| ||||| |||||| Sbjct: 225 TTCTCCAAGAAATGCTCCGAGAGATGGAAG 254 Score = 451 (67.7 bits), Expect = 4.4e-37, Sum P(3) = 4.4e-37 Identities = 149/209 (71%), Positives = 149/209 (71%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383 T G AGA CATGTCTGC AA GA AA GGAAA TT GA GAT TGGCAAA G GA AA Sbjct: 249 TGGAAGAGCATGTCTGCAAAGGAAAAGGGAAAGTTCGAGGATTTGGCAAAGGGTGATAAA 308 Query: 384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAA---AAAG 440 GC CG TATGAA G GA ATGAA ACCTATATCCC CC AAAGG GAGACAAA AAAG Sbjct: 309 GCACGGTATGAACGTGAGATGAAGACCTATATCCCACCAAAAGGAGAGACAAAGGGAAAG 368 Query: 441 AAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTATCTTGCCTGTTTTTACTT 500 A AAGGATCC AATGCACC AAGAGGCC CC T G T TT C T TT T TT Sbjct: 369 AGAAAGAAGGATCCAAATGCACCAAAGAGGCCACCATCTGCCTTTTTCATCTTCTG--TT 426 Query: 501 CCCAGACACGTTTTACAGTAGAATCTGAGAGA 532 C A ACAC T CAG A AA G GAGA Sbjct: 427 CTGA-ACACCGTCCCCAG-ATAAAGAGCGAGA 456 Score = 399 (59.9 bits), Expect = 8.8e-35, Sum P(3) = 8.8e-35 Identities = 129/177 (72%), Positives = 129/177 (72%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAA-AG-GAGAACATCCTG 1028 TC GCCTT TTC TCTTCTG TCTGA A CG CC A AT AA AG GAGA C TCCTG Sbjct: 405 TCTGCCTTTTTCATCTTCTGTTCTGAACACCGTCCCCAGATAAAGAGCGAGA-C-TCCTG 462 Query: 1029 GCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGA-ATAACACTGCTGCA 1087 G CT TCCATTGGTGA GC AAGAAACT GG GAG TGTGG A AACA CT C Sbjct: 463 GTCTTTCCATTGGTGACACCGCTAAGAAACTAGGGGAGTTGTGGGCAGAACAAA-CTCCC 521 Query: 1088 GATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGA-AAAGGT 1146 A GA AA C GCC ATGA A AA GCTGC AAGCT AAGGA AAATA GA AAAG T Sbjct: 522 AAGGATAAACTGCCACATGAGCAAAAAGCTGCCAAGCTAAAGGAGAAATATGAGAAAGAT 581 Score = 331 (49.7 bits), Expect = 4.4e-37, Sum P(3) = 4.4e-37 Identities = 129/189 (68%), Positives = 129/189 (68%), Strand = Plus / Plus Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGA 2199 T TG GAA GAT TTGCTGCATA CG GCTAA GG AAG TGATG G AAAAA A Sbjct: 570 TATGAGAAAGATGTTGCTGCATACCGGGCTAAGGGCAAGAGTGATGTTGGCAAAAA---A 626 Query: 2200 GTTGTCAAGGCTGAAAAAAGCAAG-AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGA 2258 GTT CA GG G A AG AAAAAGAAGG GA A A A GA GATGA Sbjct: 627 GTTC-CAGGGAGGGCGACAGGTTCTAAAAAGAAGGTTGAACCACACCACCATGATGATGA 685 Query: 2259 AGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGA 2318 AGA GA GAGGA GA GAGGA GA GA G GATGAAGATGA GA GA GATGATGA A Sbjct: 686 AGAAGACGAGGACGAAGAGGATGAGGA-G--GATGAAGATGATGACGACGATGATGA--A 740 Query: 2319 TGAATAAGTTG 2329 T AAT TTG Sbjct: 741 TAAATGCTTTG 751 >X98857 L.fluviatilis mRNA for HMG protein Length = 1650 Plus Strand HSPs: Score = 489 (73.4 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33 Identities = 121/150 (80%), Positives = 121/150 (80%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ||||| || |||||||| |||||||| | ||||| ||||| ||||| || | || ||| Sbjct: 73 ATGGGTAAGGGAGATCCGAAGAAGCCCAAGGGCAAGATGTCGTCATACGCCTACTTCGTG 132 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || || |||||||| ||||||||| ||||||| || || |||||||| | ||| Sbjct: 133 CAGACGTGCCGCGAGGAGCACAAGAAGAAGAACCCAGAGGCGTCGGTCAACTTTGCCGAG 192 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 || || ||||||||||| ||| |||||||| Sbjct: 193 TTCTCCAAGAAGTGCTCCGAGCGGTGGAAG 222 Score = 434 (65.1 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33 Identities = 126/175 (72%), Positives = 126/175 (72%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGC 1030 ||||| |||||| ||| |||| ||||||| ||| | || | | ||| |||| || Sbjct: 373 TCGGCTTTCTTCATCTACTGCGCTGAGTACCGCTCCAAGGTGCGCGCCGAAAATCCCGGT 432 Query: 1031 CTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGAT 1090 || ||||||| |||| ||||||||||| ||||||||||| ||| || |||| || Sbjct: 433 CTCACCATTGGCTCCATTGCCAAGAAACTGGGTGAGATGTGGAACAACGCTCCTGCTGAC 492 Query: 1091 GACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 || ||| | || || ||| | || ||||||||||| || ||||| |||| Sbjct: 493 GAAAAGTCGATCTACGAGCGCAAGACAGCCAAGCTGAAGGAGAAGTACGACAAGG 547 Score = 286 (42.9 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33 Identities = 104/147 (70%), Positives = 104/147 (70%), Strand = Plus / Plus Query: 2203 GTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGG--AGGAAGATGAGGAA-GATGAA 2259 G CAAGG GA A AGCAAG G AA GG AG AAG GAGG A GATGA Sbjct: 571 GGCAAGGTCGAGACCAGCAAGGTTGCCTCGAAACCGGCCAGCAAGCAGAGGGATGATGAC 630 Query: 2260 GAGGATGAGGAGGA-G--GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGAT 2316 GA GATGA GA GA G GAGGAAGATGA GA GATGA GATGAAGA GA GATGATGAT Sbjct: 631 GACGATGAAGATGATGATGAGGAAGATGACGAGGATGAGGATGAAGACGATGATGATGAT 690 Query: 2317 GATGAATAAGTTGGTTCTAGC-GCAGTTT 2344 GA GAATA G G T CTAGC G AGT T Sbjct: 691 GACGAATAGGA-G-TGCTAGCAGGAGTGT 717 >Y10043 Homo sapiens mRNA for high mobility group protein HMG2a Length = 1633 Plus Strand HSPs: Score = 420 (63.0 bits), Expect = 8.4e-31, Sum P(3) = 8.4e-31 Identities = 128/175 (73%), Positives = 128/175 (73%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGG-AGAACATCCTGG 1029 TC G TTCTTCCT TTCTG TC GA T CGCCC AA ATCAAA A AA A CC GG Sbjct: 378 TCTGGATTCTTCCTGTTCTGTTCAGAATTCCGCCCCAAGATCAAATCCACAA-ACCCCGG 436 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTG-CAG 1088 C T TC ATTGG GA GT GC AA AA CTGGG GAGATGTGGAATAA TG CAG Sbjct: 437 CATCTCTATTGGAGACGTGGCAAAAAAGCTGGGTGAGATGTGGAATAATTTAAATGACAG 496 Query: 1089 ATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 TGA AAGCAGCCTTA A AAGGC GC AAGCTGAAGGA AA TA GA AAGG Sbjct: 497 -TGAAAAGCAGCCTTACATCACTAAGGCGGCAAAGCTGAAGGAGAAGTATGAGAAGG 552 Score = 417 (62.6 bits), Expect = 8.4e-31, Sum P(3) = 8.4e-31 Identities = 113/150 (75%), Positives = 113/150 (75%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||| ||||| || || ||||| || | ||||| | ||| | ||||| || |||||| Sbjct: 87 ATGGCTAAAGGTGACCCCAAGAAACCAAAGGGCAAGACGTCCGCTTATGCCTTCTTTGTG 146 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || | || || ||||||||||| ||||||| | | ||||| || | || Sbjct: 147 CAGACATGCAGAGAAGAACATAAGAAGAAAAACCCAGAGGTCCCTGTCAATTTTGCGGAA 206 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 ||||| ||||||||||| |||||||||||| Sbjct: 207 TTTTCCAAGAAGTGCTCTGAGAGGTGGAAG 236 Score = 318 (47.7 bits), Expect = 8.4e-31, Sum P(3) = 8.4e-31 Identities = 114/159 (71%), Positives = 114/159 (71%), Strand = Plus / Plus Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAG-CTAAAGGAAAGCCTGATGCAGCAAAAAAGGG 2198 T TG GAAGGAT TTGCTG TAT AG C AAAGGAAAG TGATG GCAAA GGG Sbjct: 543 TATGAGAAGGATGTTGCTGACTATA-AGTCGAAAGGAAAGTTTGATGGTGCAAA---GGG 598 Query: 2199 AGTTGTCAAGGCTGAAAAAAGCAAGAAA-AAGAAGGAAGAGGAGGAAGATGAGGAAGATG 2257 TG AA G TG A AAG AAGA GGAAGA GA GAA A GAGGA GA G Sbjct: 599 TCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGA-GGAAGATGAAGAACAGGAGGAGGAAG 657 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATG 2299 AAGAGGA GAGGAGGAGGAGGA GATGAA AA A GAA TG Sbjct: 658 AAGAGGAGGAGGAGGAGGAGGAGGATGAATAA-A-GAAACTG 697 Score = 217 (32.6 bits), Expect = 2.4e-26, Sum P(3) = 2.4e-26 Identities = 63/86 (73%), Positives = 63/86 (73%), Strand = Plus / Plus Query: 2232 GGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGA 2291 G AA AGG GGAAGA GA GA GA GAA AGGA GAGGA GA GAGGA GA GA GA GA Sbjct: 617 GAAAAAGGTGGAAGAGGAAGATGAAGAACAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGA 676 Query: 2292 TGAAGATGAAGAA-GAAGATGATGAT 2316 GA GATGAA AA GAA TG T AT Sbjct: 677 GGAGGATGAATAAAGAAACTGTTTAT 702 Score = 209 (31.4 bits), Expect = 5.4e-26, Sum P(3) = 5.4e-26 Identities = 121/195 (62%), Positives = 121/195 (62%), Strand = Plus / Plus Query: 2173 GGAAAGCCTGATGCAGCAAAAA-AG--GGA-GTTGTCAAGGCTGAAAAAAGCAAGAAAAA 2228 G AAAGC TGA G AG A A AG GGA GTTG C G CT AA G AAG AAA Sbjct: 525 GCAAAGC-TGAAGGAGAAGTATGAGAAGGATGTTG-CT-GACTATAAGTCGAAAGGAAAG 581 Query: 2229 ---GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 GA GG A AGG TG AAG TG G A AGG GGA GAGGAAGATGA Sbjct: 582 TTTGATGGTGCAA-AGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGAAGATGA 640 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCG-CAGTTT 2344 AGAA A GA GA GAAGAAGA GA GA GA GA GA A G TG T AG C GTTT Sbjct: 641 AGAACAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGATGAATAAAGAAACTGTTT 700 Query: 2345 TTTTTT-TC-TTGTCTATA 2361 T T T TC TTGT ATA Sbjct: 701 ATCTGTCTCCTTGTGAATA 719 >AF003626 Homo sapiens cosmids IM0525, LC1233, Qc3C1, LB1439, Qc12C11 and Length = 86,769 Plus Strand HSPs: Score = 453 (68.0 bits), Expect = 3.6e-30, Sum P(3) = 3.6e-30 Identities = 155/223 (69%), Positives = 155/223 (69%), Strand = Plus / Plus Query: 960 TTTTTTTTAGTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGG-A 1018 TT TT AG TC G TTCTTCCT TTCTG TC GA T CGCCC AA ATCAAA A Sbjct: 68279 TTCTTCCAAGGTCTGGATTCTTCCTGTTCTGTTCAGAATTCCGCCCCAAGATCAAATCCA 68338 Query: 1019 GAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAAC 1078 AA A CC GGC T TC ATTGG GA GT GC AA AA CTGGG GAGATGTGGAATAA Sbjct: 68339 CAA-ACCCCGGCATCTCTATTGGAGACGTGGCAAAAAAGCTGGGTGAGATGTGGAATAAT 68397 Query: 1079 ACTGCTG-CAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATA 1137 TG CAG TGA AAGCAGCCTTA A AAGGC GC AAGCTGAAGGA AA TA Sbjct: 68398 TTAAATGACAG-TGAAAAGCAGCCTTACATCACTAAGGCGGCAAAGCTGAAGGAGAAGTA 68456 Query: 1138 CGAAAAGGTAAGAAGTGTGGGTTTGCTTGGTAAAATGATGACAAG 1182 GA AAGGTAAG GTG GGG T G T A TG TGA AG Sbjct: 68457 TGAGAAGGTAAG--GTG-GGGCTGGAAGCCTGGACTGGTGAACAG 68498 Score = 441 (66.2 bits), Expect = 3.6e-30, Sum P(3) = 3.6e-30 Identities = 117/153 (76%), Positives = 117/153 (76%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 |||| ||||| || || ||||| || | ||||| ||||| | ||||| || |||||| Sbjct: 66761 ATGGCTAAAGGTGACCCCAAGAAACCAAAGGGCAAGATGTCCGCTTATGCCTTCTTTGTG 66820 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 || || || | || || ||||||||||| ||||||| | | ||||| || | || Sbjct: 66821 CAGACATGCAGAGAAGAACATAAGAAGAAAAACCCAGAGGTCCCTGTCAATTTTGCGGAA 66880 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTA 153 ||||| ||||||||||| ||||||||||||||| Sbjct: 66881 TTTTCCAAGAAGTGCTCTGAGAGGTGGAAGGTA 66913 Score = 338 (50.7 bits), Expect = 3.6e-30, Sum P(3) = 3.6e-30 Identities = 256/411 (62%), Positives = 256/411 (62%), Strand = Plus / Plus Query: 1892 TTGCACCTCAATGAGGCATAACT-TTG-CAAAT-ATTAGACTA-TGCCATTTCA-TGAGT 1946 TT C C T AA GA A AA T TT CA A ATT GA TA TGC A T TGA T Sbjct: 68673 TTACTCTTTAAGGAAAAAAAAATGTTAACAGAGGATTTGA-TAGTGCTACTAATGTGACT 68731 Query: 1947 TATAG-ATTGTTATAATGATCTTGTAT-TTTTATGTTC-ATTTATTGAAGTTCTAG-TT- 2001 T AG A TT AA A C TA TTTTA TTC A T T AAG C A TT Sbjct: 68732 TGAAGGACACTTG-AAC-ACCCACTAACTTTTAAATTCGAATGGCT-AAGAACCAAATTC 68788 Query: 2002 ATTTCTGGAGTTGCTGTGGATCTACA-GATACGTG-A-TATTTTGGTATAACTAGAAT-C 2057 AT T TGGA CT GAT TA A GATA G A T T TT T T A T AAT C Sbjct: 68789 ATATATGGAAACACTTCAGATATATATGATAGCAGCACTGTCTTACT-TGATTTCAATTC 68847 Query: 2058 TTGATTTCTTTCAT-A-A--AGTTCTGCCATGTT-CTATTTCTTTCCTTAATCTTTTTTT 2112 TG TCTT C T A A AG CTGC ATGTT CTA TT T T T AA C Sbjct: 68848 CTGTCCTCTTACCTGAGATGAGGACTGC-ATGTTTCTACTT-TGTGTTAAAACAGCCGCA 68905 Query: 2113 CTTCCCTACTGTTTTATCCTCCCT-TTGCTTTGGAAGGATATTGCTGCATATCGAG-CTA 2170 T C C TG T T TCCCT TT CT T AGGAT TTGCTG TAT AG C A Sbjct: 68906 -TACTCATTTGAAATGTG-TCCCTGTTCCTCT---AGGATGTTGCTGACTATA-AGTCGA 68959 Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAA-AAG 2229 AAGGAAAG TGATG GCAAA GGG TG AA G TG A AAG AAG Sbjct: 68960 AAGGAAAGTTTGATGGTGCAAA---GGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAG 69016 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 A GGAAGA GA GAAGA GAGGA GA GAAGAGGA GAGGAGGAGGAGGA GATGAA AA Sbjct: 69017 A-GGAAGATGAAGAAGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGATGAATAA 69075 Query: 2290 GATGAAGATG 2299 A GAA TG Sbjct: 69076 -A-GAAACTG 69083 Score = 226 (33.9 bits), Expect = 3.1e-25, Sum P(3) = 3.1e-25 Identities = 64/86 (74%), Positives = 64/86 (74%), Strand = Plus / Plus Query: 2232 GGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGA 2291 G AA AGG GGAAGA GA GA GA GAAGAGGA GAGGA GA GAGGA GA GA GA GA Sbjct: 69003 GAAAAAGGTGGAAGAGGAAGATGAAGAAGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGA 69062 Query: 2292 TGAAGATGAAGAA-GAAGATGATGAT 2316 GA GATGAA AA GAA TG T AT Sbjct: 69063 GGAGGATGAATAAAGAAACTGTTTAT 69088 Score = 226 (33.9 bits), Expect = 3.1e-25, Sum P(3) = 3.1e-25 Identities = 254/447 (56%), Positives = 254/447 (56%), Strand = Plus / Plus Query: 1915 TTGCAAATATTAGACTATGCCATTTCATGAGTTATAGATTGTTAT-A-ATGATCTTGTAT 1972 TTG AAA ATT CT T C TTT A GA A A AT GTTA A A GAT TTG AT Sbjct: 68659 TTGAAAA-ATTTTCCT-TACTCTTTAAGGAAAAAAAAAT-GTTAACAGAGGAT-TTG-AT 68713 Query: 1973 TTTTATGTTCATTT-A-TTGAAGTTCTAGTT-ATTTCTGGAGTTGCTGTGGA--TCTACA 2027 T T T AT T A TTGAAG C A TT A C A T CT T A TC A Sbjct: 68714 AGTGCTACTAATGTGACTTGAAGGAC-ACTTGAACACCC-ACTAACTTTTAAATTCGAAT 68771 Query: 2028 GA-TACGTGATATTTTGGTATAACTAGAATCTTGATTTCTTTCATAA-AGTTCTGCCATG 2085 G TA G A TT TATA A A CTT A T T T AT A AG C GC TG Sbjct: 68772 GGCTAAGAACCAAATTCATATATGGAAACACTTCAGATATAT-ATGATAG--CAGCACTG 68828 Query: 2086 TTCTATTTCTTTCCTTAATCTTTTTTTCTTCCCT-AC-TGTTTTATCCTCCCTT-TGCTT 2142 T TA TT TT C A TC T T TCTT CCT A TG T C TT T CTT Sbjct: 68829 TCTTACTTGATTTCA-ATTCCTGTCCTCTTACCTGAGATGAGGACTGCATGTTTCTACTT 68887 Query: 2143 TGGAAGGATATTGCTGCATA-TCGAGCT-AAAGGAAAGCCTGATGCAGCAAAAAAGGGAG 2200 TG A A GC GCATA TC A T AAA G CCTG T C C A A G G Sbjct: 68888 TGTGTTAAAACAGCCGCATACTC-ATTTGAAATGTGTCCCTGTTCCT-CTAGGATGTT-G 68944 Query: 2201 TTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG 2260 TG C A G AAAG AA A GA GG A AGG TG AAG TG Sbjct: 68945 CTGACTATAA-GTCGAAAGGAA-AGTTTGATGGTGCAA-AGGGTCCTGCTAAAGTTGCCC 69001 Query: 2261 AGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 G A AGG GGA GAGGAAGATGAAGAAGA GA GA GAAGAAGA GA GA GA GA G Sbjct: 69002 GGAAAAAGGTGGAAGAGGAAGATGAAGAAGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGG 69061 Query: 2321 AATAAGTTGGTTCTAGCG-CAGTTTTTTTTT-TC-TTGTCTATA 2361 A A G TG T AG C GTTT T T T TC TTGT ATA Sbjct: 69062 AGGAGGATGAATAAAGAAACTGTTTATCTGTCTCCTTGTGAATA 69105 Score = 205 (30.8 bits), Expect = 2.6e-24, Sum P(3) = 2.6e-24 Identities = 195/325 (60%), Positives = 195/325 (60%), Strand = Plus / Plus Query: 1826 CAGTGTCTACCCTTTAA-TCAAAGTC-TCTACATTCT-GGTTTTAATAG-AGTTAGG-AT 1880 CAGTGT TAC AA TC AAGT T T C TTCT GG TA AGTTA AT Sbjct: 83925 CAGTGTGTACTGGGAAAGTCCAAGTAGTTTCCTTTCTTGGGAACTGTATTAGTTATTTAT 83984 Query: 1881 --CTG-GTAGATAA-TTGCACCTCAATG-AG-G-CATAACTTTGCAAATATTAGACTAT- 1932 CTG GT GA AA TT C CC CA T AG G C TAA T A TATTA TA Sbjct: 83985 TGCTGCGT-GACAAATTACCCCACATTTTAGTGACTTAAAATAATATTTATTATCTTACA 84043 Query: 1933 GCCATTTCATGAGTTATAGATTGTTATAATGATCTTGTATTTTTATGTTC-ATTTATTGA 1991 GC T T TG GT A GA T T T A CT G AT TT GTT A T T A Sbjct: 84044 GCTGTGTG-TGTGTCAG-GAATCCACTGCTTAGCTGG-ATCCTTTGGTTTGAGGTCTGTA 84100 Query: 1992 AGTTCTAGTTATTT-CTGGAGTTGCTGTGGATCTACAGATACGTGATATTTTGGTATAAC 2050 A TC AG TATT C G GTTGCTGT ATCT CA A C TGA T GG A A Sbjct: 84101 A--TCAAGGTATTGGCCAGGGTTGCTGTC-ATCT-CAAAG-CTTGAC-TGGAGG-AGGAT 84153 Query: 2051 TAGAATCTTGATTTCTTTCATAAAGTTCT-GCCA-TGTTCTATTTCTTTCCTTAATCTTT 2108 T G TC A TTC TCA A TTCT G CA TGTTC TTTCTTTC TT T TT Sbjct: 84154 T-GCTTCCA-AGTTCACTCACATGATTCTAGGCAGTGTTCAGTTTCTTTCTTTCCTTCTT 84211 Query: 2109 TTTTCTTCCCTACTGTTTTA--TCCTCCCT-TTGCTTT 2143 TTTTCTT C T CT TTTT T CT CT TT CTTT Sbjct: 84212 TTTTCTTTCTTTCTTTTTTTCTTTCTTTCTCTTTCTTT 84249 >I14731 Sequence 10 from patent US 5451670. Length = 2188 Minus Strand HSPs: Score = 871 (130.7 bits), Expect = 6.2e-30, P = 6.2e-30 Identities = 213/253 (84%), Positives = 213/253 (84%), Strand = Minus / Plus Query: 2397 AAAGGAGTGAGTTGTGTACAGGGGGGTTAAATGCTTTATAGACAAGAAAAAAAAAACTGC 2338 AAAGGAGTGAGTTGTGTACAGGGGGGTTAAATGCTTTATAGACAAGAAA AAA TGC Sbjct: 1 AAAGGAGTGAGTTGTGTACAGGGGGGTTAAATGCTTTATAGACAAGAAAGAAAT---TGC 57 Query: 2337 GCTAGAACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTC 2278 CTA AA ACTTATTCATCATCATCATC TCTTC TC TC TC TCTTC TC TCTTC Sbjct: 58 TCTAAAAGAGACTTATTCATCATCATCATCATCTTCCTCCTCCTCTTCTTCCTCTTCTTC 117 Query: 2277 CTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCT 2218 TCCTC TC TC TC TC TC TC TCCTCATCTTCCTC TCTTCCTTCTT TTCTTGCT Sbjct: 118 GTCCTCTTCATCCTCTTCGTCTTCGTCCTCATCTTCCTCTTCTTCCTTCTTCTTCTTGCT 177 Query: 2217 TTTTTCAGCCTTGACAACTCCCTTTTTTGC-TGCATCAGGCTTTCCTTTAGCTCGATATG 2159 TT TC GCCTTG CAACT C TTTTTTGC TGCATCA CTT CCTTT GC CG TATG Sbjct: 178 CTTCTCGGCCTTGGCAACTAC-TTTTTTGCCTGCATCAACCTTCCCTTTGGCCCGGTATG 236 Query: 2158 CAGCAATATCCTTC 2145 CAGC ATATCCTTC Sbjct: 237 CAGCGATATCCTTC 250 >X80462 M.musculus HMG1-R-154 gene Length = 190 Plus Strand HSPs: Score = 619 (92.9 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25 Identities = 135/149 (90%), Positives = 135/149 (90%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||| Sbjct: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCGCTCTTTGTG 60 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 |||| || |||||||||| |||||||||||||| |||||||| ||||||||||||| | Sbjct: 61 AAAACCTGCTGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGGG 120 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAA 149 || || ||||||||||||||||||||||| Sbjct: 121 TTCTCCAAGAAGTGCTCAGAGAGGTGGAA 149 Score = 167 (25.1 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25 Identities = 39/46 (84%), Positives = 39/46 (84%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGG 369 | | | ||||||||||||||||| || || |||||||||| ||||| Sbjct: 145 TGGAAAACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGGTATGG 190 >X80466 M.musculus HMG1-R-227 gene Length = 184 Plus Strand HSPs: Score = 619 (92.9 bits), Expect = 3.7e-20, P = 3.7e-20 Identities = 143/164 (87%), Positives = 143/164 (87%), Strand = Plus / Plus Query: 13 GATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGG 72 GATCCTAAGAAGCCGAGAGGCAAAATGTC TCATATGCATT TTTGTGCAAACTTG CGG Sbjct: 1 GATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCATTCTTTGTGCAAACTTGCCGG 60 Query: 73 GAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAG 132 GAGGAGCA AAGAAGAAGCACCC GATGCTTC GTCAACTTCTCAGAGTT TC AAGAAG Sbjct: 61 GAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAGTTCTCCAAGAAG 120 Query: 133 TGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 TGCTCAGAGAGGTGGAAG A G GCT AA AA A G AA Sbjct: 121 TGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAAAAGGGGAA 164 Score = 206 (30.9 bits), Expect = 0.24, P = 0.22 Identities = 46/52 (88%), Positives = 46/52 (88%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAG 375 | | ||||||||||||||||||| || || |||||||||||||||||||| | Sbjct: 133 TGGAAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATATGGCAAAGG 184 >X80461 M.musculus HMG1-R-145 gene Length = 196 Plus Strand HSPs: Score = 593 (89.0 bits), Expect = 5.3e-19, P = 5.3e-19 Identities = 145/174 (83%), Positives = 145/174 (83%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ATGG CA AGGAGATCCTAAGAAGCC AGAGGCA AATGTC T ATATGCATT TTTGTG Sbjct: 1 ATGGACAGAGGAGATCCTAAGAAGCCAAGAGGCACAATGTCCTTATATGCATTCTTTGTG 60 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAAC TG CGGGAGGAGCA A GA GA CACCCAGATGCTTC GTCAACTTCTCAGAG Sbjct: 61 CAAACCTGCCGGGAGGAGCACAGGA-GAGACACCCAGATGCTTCTGTCAACTTCTCAGAG 119 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAA-AACATGCTAA 174 T TC AAGAAGTGCTCAGAGAGGTGGAAG A G GCT AA AA A G AA Sbjct: 120 CTCTCCAAGAAGTGCTCAGAGAGGTGGAAGACATGTCTGCTAAAGAAAAGGGGAA 174 Score = 196 (29.4 bits), Expect = 0.65, P = 0.48 Identities = 46/53 (86%), Positives = 46/53 (86%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGC 376 T G AGAC ATGTCTGCTAAAGA AA GG AAATTTGAAGATATGGCAA AGC Sbjct: 144 TGGAAGAC-ATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATATGGCAATAGC 195 >X80465 M.musculus HMG1-R-168 gene Length = 181 Plus Strand HSPs: Score = 570 (85.5 bits), Expect = 6.4e-18, P = 6.4e-18 Identities = 144/177 (81%), Positives = 144/177 (81%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATC-ATATGCATTTTTTGT 59 ATGGGCAAAGGAGATCCTAAGAAGC GAGA GCAAAATGTC T ATATGCATT TTT T Sbjct: 1 ATGGGCAAAGGAGATCCTAAGAAGCTGAGACGCAAAATGTCCTGTATATGCATTCTTTAT 60 Query: 60 GCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGA 119 GCAAAC TG C GGAGGAGCA AAGA AAG ACC GATGCTTC GTCAACTTCTCAGA Sbjct: 61 GCAAACCTGCCAGGAGGAGCACAAGACAAAGTACCTGGATGCTTCTGTCAACTTCTCAGA 120 Query: 120 GTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 GTT TC AAGAAGTG TCAGAGAGGTGGAAG A G GCT AA AA A G AA Sbjct: 121 GTTCTCCAAGAAGTGTTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAAAAAGGGAA 177 >X80463 M.musculus HMG1-R-159 gene Length = 192 Plus Strand HSPs: Score = 569 (85.4 bits), Expect = 6.7e-18, P = 6.7e-18 Identities = 143/174 (82%), Positives = 143/174 (82%), Strand = Plus / Plus Query: 2 TGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGC 61 TGGGCAAA AGATCCTAAGAAGC GAGAGGCAAAATGTC TCATATGCATT TTT TGC Sbjct: 2 TGGGCAAAAAAGATCCTAAGAAGCTGAGAGGCAAAATGTCCTCATATGCATTCTTTTTGC 61 Query: 62 AAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGT 121 AAAC T T GGG G AGCA AAGAAGAAGCACC GATGCTTC TCAACTT TCAGAGT Sbjct: 62 AAACCTTTTGGGTGTAGCACAAGAAGAAGCACCTGGATGCTTCT-TCAACTTTTCAGAGT 120 Query: 122 TTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 T TCTA GAAGTGCTCAGAGAGGTGG AG A GA GCT AA AA A G AA Sbjct: 121 TCTCTATGAAGTGCTCAGAGAGGTGGGAGACCATGACTGCTAAAGAAAAGGGGAA 175 Score = 176 (26.4 bits), Expect = 5.4, P = 1.0 Identities = 40/46 (86%), Positives = 40/46 (86%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGG 369 | | |||||||| |||||||||| || || |||||||||||||||| Sbjct: 144 TGGGAGACCATGACTGCTAAAGAAAAGGGGAAATTTGAAGATATGG 189 >X80464 M.musculus HMG1-R-161 gene Length = 195 Plus Strand HSPs: Score = 568 (85.2 bits), Expect = 7.4e-18, P = 7.4e-18 Identities = 144/175 (82%), Positives = 144/175 (82%), Strand = Plus / Plus Query: 2 TGGGCAAAGGAGATCCTAAGAAGCC-GAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 TGGGCAAA AGATCCTAAGAAG C GAGAGGCAAAATGTC TCATATGCATT TTT TG Sbjct: 2 TGGGCAAAAAAGATCCTAAGAAGGCTGAGAGGCAAAATGTCCTCATATGCATTCTTTTTG 61 Query: 61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 CAAAC T T GGG G AGCA AAGAAGAAGCACC GATGCTTC TCAACTT TCAGAG Sbjct: 62 CAAACCTTTTGGGTGTAGCACAAGAAGAAGCACCTGGATGCTTCT-TCAACTTTTCAGAG 120 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 TT TCTAAGAAGTGCTCAGAGAGGTGG AG A GA GCT AA AA A G AA Sbjct: 121 TTCTCTAAGAAGTGCTCAGAGAGGTGGGAGACCATGACTGCTAAAGAAAAGGGGAA 176 Score = 185 (27.8 bits), Expect = 2.1, P = 0.87 Identities = 119/188 (63%), Positives = 119/188 (63%), Strand = Plus / Plus Query: 187 AAGACAGTTTCCAATTGAGGATGCAAAA-AAAA-G-CCTAGTTGGCATTCTCGTAGTGGG 243 AA A AG T C AA AGG TG A AAAA G CCT T GCATTCT T G Sbjct: 7 AAAAAAGATCCTAAGA-AGGCTGAGAGGCAAAATGTCCTCATATGCATTCTTTTTGCAA- 64 Query: 244 ACGCTATTACAT--AGCAAAAGACATTGGTTTTGAGGATAATTTACTTAAATGTTACA-A 300 AC CT TT T AGCA AAGA G TG GAT TT CTT AA TT CA A Sbjct: 65 AC-CTTTTGGGTGTAGCACAAGAAGAAGCACCTG--GATGCTT--CTTCAACTTTTCAGA 119 Query: 301 CTTAAACTTACAAAT--TAATT-ATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAAT 357 TT CT A AA T T A A T G AGACCATG CTGCTAAAGA AA GG AAAT Sbjct: 120 GTTCT-CTAAGAAGTGCTCAGAGAGGTGGGAGACCATGACTGCTAAAGAAAAGGGGAAAT 178 Query: 358 TTGAAGATATGGCAAA 373 TTGAAGATATGG AA Sbjct: 179 TTGAAGATATGGGGAA 194 >X80460 M.musculus HMG1-R-135 gene Length = 190 Plus Strand HSPs: Score = 565 (84.8 bits), Expect = 1.0e-17, P = 1.0e-17 Identities = 145/173 (83%), Positives = 145/173 (83%), Strand = Plus / Plus Query: 2 TGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGC 61 TGGGCAAA AGATCCTAAGAAGC GAGAGGCAAAATGTC TCATATGCATT TTT TGC Sbjct: 2 TGGGCAAAAAAGATCCTAAGAAGCTGAGAGGCAAAATGTCCTCATATGCATTCTTTTTGC 61 Query: 62 AAACTTGTC-GGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120 AAAC T TC GGG G AGCA AAGAAGAAGCACCC GATGCTTC TCAACTT TCAGAG Sbjct: 62 AAACCT-TCTGGGTGTAGCACAAGAAGAAGCACCCGGATGCTTCT-TCAACTT-TCAGAG 118 Query: 121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 TT TCTAAGAAGTGCTCAGAGAGGT G AG A GA GCT AA AA A G AA Sbjct: 119 TTCTCTAAGAAGTGCTCAGAGAGGTAGGAGACCATGACTGCTAAAGAAAAGGGGAA 174 Score = 176 (26.4 bits), Expect = 5.5, P = 1.0 Identities = 40/46 (86%), Positives = 40/46 (86%), Strand = Plus / Plus Query: 324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGG 369 | | |||||||| |||||||||| || || |||||||||||||||| Sbjct: 143 TAGGAGACCATGACTGCTAAAGAAAAGGGGAAATTTGAAGATATGG 188 >X80467 M.musculus HMG1-R-87 gene Length = 190 Plus Strand HSPs: Score = 563 (84.5 bits), Expect = 1.3e-17, P = 1.3e-17 Identities = 143/173 (82%), Positives = 143/173 (82%), Strand = Plus / Plus Query: 2 TGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGC 61 TGGGCAAA AGATCCTAAGAAGC GAGAGGCAAAATGTC TCATATGCATT TTT TGC Sbjct: 2 TGGGCAAAAAAGATCCTAAGAAGCTGAGAGGCAAAATGTCCTCATATGCATTCTTTTTGC 61 Query: 62 AAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGT 121 AAAC T T GGG G AGCA AAGAAGAAGCACC GATGCTT TCAACTT TCAGAGT Sbjct: 62 AAACCTTTTGGGTGTAGCACAAGAAGAAGCACCTGGATGCTTT--TCAACTTTTCAGAGT 119 Query: 122 TTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAA-AACATGCTAA 174 T TCTAAGAAGTGCTCAGAGAGGTGG AG A GA GCT AA AA A G AA Sbjct: 120 TCTCTAAGAAGTGCTCAGAGAGGTGGGAGACCATGACTGCTAAAGAAAAGGGGAA 174 Score = 178 (26.7 bits), Expect = 4.4, P = 0.99 Identities = 116/185 (62%), Positives = 116/185 (62%), Strand = Plus / Plus Query: 185 AAAAGACAGTTTCCAATTGAGGATGCAAAAAAAAGCCTAGTTGGCATTCTCGTAGTGGGA 244 AAAAGA T A TGAG A GCAAAA CCT T GCATTCT T G A Sbjct: 9 AAAAGATCCTAAGAAGCTGAG-AGGCAAAATGT--CCTCATATGCATTCTTTTTGCAA-A 64 Query: 245 CGCTATTACAT--AGCAAAAGACATTGGTTTTGAGGATAATTTACTTAAATGTTACA-AC 301 C CT TT T AGCA AAGA G TG GAT TTT C AA T TT CA A Sbjct: 65 C-CTTTTGGGTGTAGCACAAGAAGAAGCACCTG--GATGCTTTTC--AACTTTT-CAGAG 118 Query: 302 TTAAACTTACAAAT--TAATT-ATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATT 358 TT CT A AA T T A A T G AGACCATG CTGCTAAAGA AA GG AAATT Sbjct: 119 TTCT-CTAAGAAGTGCTCAGAGAGGTGGGAGACCATGACTGCTAAAGAAAAGGGGAAATT 177 Query: 359 TGAAGATATGG 369 TGAAGATATGG Sbjct: 178 TGAAGATATGG 188 >X80459 M.musculus HMG1-R-177 gene Length = 173 Plus Strand HSPs: Score = 562 (84.3 bits), Expect = 1.6e-17, P = 1.6e-17 Identities = 140/169 (82%), Positives = 140/169 (82%), Strand = Plus / Plus Query: 2 TGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGC 61 TGGGCAAA AGATCCTAAGAAGC GAGAGGCAAAATGTC TCATATGCATT TTT TGC Sbjct: 2 TGGGCAAAAAAGATCCTAAGAAGCTGAGAGGCAAAATGTCCTCATATGCATTCTTTTTGC 61 Query: 62 AAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGT 121 AAAC T T GGG G AGCA AAGAAGAAGCACC GATGCTT TCAACTT TCAGAGT Sbjct: 62 AAACCTTTTGGGTGTAGCACAAGAAGAAGCACCTGGATGCTTT--TCAACTTTTCAGAGT 119 Query: 122 TTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAA-GAGGGCTTAAAACATG 170 T TCTAAGAAGTGCTCAGAGAGGTGG AG A GA GCT AA A A G Sbjct: 120 TCTCTAAGAAGTGCTCAGAGAGGTGGGAGACCATGACTGCTAAAGAAAAG 169 >AC002526 Human PAC clone DJ0558L21 from Xq23, complete sequence. Length = 134,580 Plus Strand HSPs: Score = 343 (51.5 bits), Expect = 6.6e-16, Sum P(3) = 6.6e-16 Identities = 109/150 (72%), Positives = 109/150 (72%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCC-GAGAGGCAAAATGTCATCATATGCATTTTTTGT 59 ATGG AAAGG GA CCT AGAA CC GA AGGCAAAATGTC C ATG TT TTTGT Sbjct: 123663 ATGGCTAAAGGTGA-CCTCAGAAACCCGAAAGGCAAAATGTCTGCTAATGTCTTCTTTGT 123721 Query: 60 GCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCA-G 118 G A AC TG G GA GA CATAAGAAG G A CCAGATG C GTCA TT T A G Sbjct: 123722 GAAGACATGCAGAGAAGAACATAAGAAGTTGAAACCAGATGGCCCTGTCAGTTTTTTAAG 123781 Query: 119 AGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150 A TTTTC AA AAGT TC GAGAGGTG AAG Sbjct: 123782 AATTTTC-AA-AAGTTATCTGAGAGGTGAAAG 123811 Score = 331 (49.7 bits), Expect = 6.6e-16, Sum P(3) = 6.6e-16 Identities = 121/176 (68%), Positives = 121/176 (68%), Strand = Plus / Plus Query: 971 TCGGCCTTCTTCCTCTTCTGCTCTGAGTATCG-CCCAAAAATCAAAGGAGAACATCCTGG 1029 TC G TTCTTCCT TTCTG TC GA T TC CCC AA ATCAAA A A CCTGG Sbjct: 123948 TCTGAATTCTTCCTGTTCTGTTCAGAAT-TCTACCCCAAGATCAAATCCCCAAAACCTGG 124006 Query: 1030 CCTGTCCATTGGTGATGTTGCGAAGAAA--CTGGGAGAGATGTGGAATAACACTGCTG-C 1086 C T TC TTG GATGT C AA AA CTGGG GAGATGTGG AT G TG C Sbjct: 124007 CGTCTCTGTTGCAGATGTGACCAAAAACTGCTGGGTGAGATGTGGGATGTTTAAG-TGAC 124065 Query: 1087 AGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145 AG TGA AAGCAG CTT A AAGGC G GAAGCTGAAGGA AA TA GA AAGG Sbjct: 124066 AG-TGAAAAGCAGTCTTGCATCACTAAGGCGGTGAAGCTGAAGGAGAAGTATGAGAAGG 124123 Score = 244 (36.6 bits), Expect = 6.6e-16, Sum P(3) = 6.6e-16 Identities = 104/151 (68%), Positives = 104/151 (68%), Strand = Plus / Plus Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAG-CTAAAGGAAAGCCTGATGCAGCAAAAAAGGG 2198 T TG GAAGGAT TTGC G T T AG CTAAAGGAAAG TG TG CAAAA A Sbjct: 124114 TATGAGAAGGATGTTGCCGACTTTA-AGTCTAAAGGAAAGTTTGGTGGCTCAAAAGACCC 124172 Query: 2199 -AGTTGTCAAGGC-TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGAT 2256 A T C C TG AAAAAG AGAA AAGA AAGA GA AAG GAGGAAGA Sbjct: 124173 CACTCACCGTTACCTGGAAAAAGGTAGAAGAAGACA-AAGAAGAC-AAG--GAGGAAGAA 124228 Query: 2257 GAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGA 2291 GA GAG ATG G GG GGAGGAAGATGAA AA A Sbjct: 124229 GAGGAG-ATGTTG-GG-GGAGGAAGATGAATAATA 124260 Score = 138 (20.7 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07 Identities = 80/132 (60%), Positives = 80/132 (60%), Strand = Plus / Plus Query: 659 CATTTGA-ATTAGACATTTGGTCTCCTTTGCCCAGTGTATC-TCCTTTTGATCTTTTTAT 716 C TTTGA AT G C TT T TCCTTTGCCCA T T T T TTG T TTT T Sbjct: 32614 CTTTTGAGATGTGTCTGTTCATATCCTTTGCCCACTTTGTGATGGGGTTGTTTCATTT-T 32672 Query: 717 TTCTTGAAAAATACTATCCCTTTGAA-ATAGTGTAATTGTAGAATGTTCATCTAGGGTTC 775 TTCTTG AAA T C T C TTTG A AT TG A T TAG TT TC AG Sbjct: 32673 TTCTTGTAAATTTCAGTTC-TTTGTAGATTCTGGATTATTAGCCCTTTG-TC-AGATGAG 32729 Query: 776 TAGCTAGTATAAATT 790 TAG T G A AAATT Sbjct: 32730 TAGATTGCAAAAATT 32744 >Z93931 Human DNA sequence from PAC 438G17 on chromosome 6q22. Contains Length = 148,198 Minus Strand HSPs: Score = 340 (51.0 bits), Expect = 9.7e-15, Sum P(3) = 9.7e-15 Identities = 108/150 (72%), Positives = 108/150 (72%), Strand = Minus / Plus Query: 150 CTTCCACCTCTCTGAGCACTTCTTAGAAAACTCTGAGAAGTTGACTGAAGCA-TCTGGGT 92 CTTCCACCTCTC GAGCA TTCTT GAAAA TCTG AA TT A G G A TCT G T Sbjct: 95661 CTTCCACCTCTCAGAGCAATTCTTGGAAAATTCTGTAAAATTAATAGG-GAACTCTAGAT 95719 Query: 91 GCTTCTTCTTATGCTCCTCCC-GACAAGTTTGCACAAAAAATGCATATGATGACATTTTG 33 TTCTT TTATG TC TC C G C A T TGCACAAA AA GCATA G GACAT TTG Sbjct: 95720 TTTTCTTTTTATGTTCTTCTCTGCCCA-TCTGCACAAAGAAGGCATAGGCAGACATCTTG 95778 Query: 32 CCTCTCGGCTTCTTAGGATCTCCTTTGCCCAT 1 CC T GG T CTT GG TC CTTT CCAT Sbjct: 95779 CCCTTTGGTTCCTTCGGGTCAACTTTATCCAT 95810 Score = 327 (49.1 bits), Expect = 9.7e-15, Sum P(3) = 9.7e-15 Identities = 119/171 (69%), Positives = 119/171 (69%), Strand = Minus / Plus Query: 1141 TTCGTATTTTTCCTTCAGCTTCGCAGCCTTCTTTTCATAAGGCTGCTTGTCATCTG-CAG 1083 TTC AT TTC TTCAGCT GC CCTT T TAAGGCTGCTT TCA CTG CA Sbjct: 95355 TTCTCATACTTC-TTCAGCTGTGCCACCTTAGTGATGTAAGGCTGCTTTTCA-CTGTCAT 95412 Query: 1082 CAGTGTTATTCCACATCTCTCCCAGTTTCTTCGCAACATCACCAATGGACAGGCCAGGAT 1023 GTTATTCCACATCTC CCCAG TT TT CA TC CCAAT GA A G CAGG T Sbjct: 95413 TTAAGTTATTCCACATCTCACCCAGCTTTTTGACATG-TCTCCAATAGAGATGTCAGGGT 95471 Query: 1022 GTTCTCC-TTTGATTTTTGGGC-GATACTCAGAGCAGAAGAGGAAGAAGGCCGA 971 TT T TTTGAT TT GGC GA A TC GA AGAA AGGAAGAA C GA Sbjct: 95472 -TTGTGGATTTGATCTTGTGGCAGA-ATTCTGAATAGAAAAGGAAGAATCCAGA 95523 Score = 226 (33.9 bits), Expect = 9.7e-15, Sum P(3) = 9.7e-15 Identities = 104/158 (65%), Positives = 104/158 (65%), Strand = Minus / Plus Query: 2293 CATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCC-TCATCTTCCTCCTCT 2235 CA TT TT A TT T CTCCTC C TCCTC T AT TTCC TC TC TC T TCT Sbjct: 95205 CAGTTTTTTAAATTTTTTACTCCTCTCCCTCCTCCTTATTTTCCATCCTCCTCATTTTCT 95264 Query: 2234 TCCTTCTT-T-TTCTTGCTTTTTTCAG-C--CTTGACAACTCCCTTTTTTGCTGCATCAG 2180 T TT T T TTC CTTTTT CAG C CTT A CC TTT GC CATCA Sbjct: 95265 TTGTTGTCCTCTTCCACCTTTTTCCAGGCAACTTTAGTGGAACCCTTTGGGC--CATCAA 95322 Query: 2179 GCTTTCCTTTAG-CTCGATATGCAGCAATATCCTTC-CAAA 2141 CTTTCCTTTAG CT A A CAGCAA ATCCTTC CA A Sbjct: 95323 ACTTTCCTTTAGACTT-ACAGTCAGCAACATCCTTCTCATA 95362 Score = 139 (20.9 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11 Identities = 137/229 (59%), Positives = 137/229 (59%), Strand = Minus / Plus Query: 2142 AAGCAAAGGGAGGATAAAACAGTAGGGAAGAAAAAAAGATTAAGGAAAGAAATAGA-ACA 2084 AA CAAAG A G TAAAACAGTAGG A GA AAA GATT AAA TA ACA Sbjct: 32048 AATCAAAGT-ATGCTAAAACAGTAGGCATGAGAAAG-GATTTTTAAAAATTTTATTTACA 32105 Query: 2083 TGGCAGAACTT-TATGAAAGAAATCAAGATTC-TAGTTATA-CCAAA-ATATCACGTATC 2028 T GCA A TT TAT AAA AA CAA A C T G ATA CCA ATA CAC A Sbjct: 32106 TTGCATACATTGTAT-AAA-AATCCAAAAGCCCTTGAAATAACCATGCATA-CACC-ACA 32161 Query: 2027 TGTAGATCCACAGCAAC-TCCAGAAATAACT-AGAACTT-CAA-TAAATGAACATAAAAA 1972 T T A C A A CAA T C G T CT A ACT CAA T AA G ACA AA A Sbjct: 32162 TTTT-ACCAAAAACAATATTCTGTGTTC-CTCATTACTAACAACTCAAGGGACAACAATA 32219 Query: 1971 -TA--CAAGATCATTATAACAATCTATAACTCATGAAATGGCAT-AGTCTAATATTTGC 1917 T CAA TTATAA T T T T AT AAATG T AG T TA TTGC Sbjct: 32220 CTTTCCAACTGTGTTATAAATGTTTTTTGTT-AT-AAATGAAGTGAGATTTTTACTTGC 32276 Score = 131 (19.7 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13 Identities = 119/200 (59%), Positives = 119/200 (59%), Strand = Minus / Plus Query: 2474 GTTAACTATACAAAAAAAGA-CACTGTACAGTTTA--AAAACAAATCTTACACAGCCT-T 2419 GTTA AT AA AAA A CA G TTTA AAAA AAAT TTA A A T T Sbjct: 54872 GTTAGTCATCTGAAGAAACATCAAGGAGTTTTTTAGCAAAAGAAATTTTAGAGATAATCT 54931 Query: 2418 A-C-ATTTCA--ATTTTTTTCTTTAAAAGGAG-TGAGTTGTGTACAGGGGGGTTAA-ATG 2365 A C A CA A TT TT TA AAG A TGAG TGT A A GGG AA AT Sbjct: 54932 AACCAAAGCACCAGTTCTTAAAGTAGAAGAATCTGAGATGTAAAAAATTGGGGCAATATT 54991 Query: 2364 CTTTATAGACAAGAAAAAAAAAACTGCGCTAGAACCAACTTATTCATCATCATCATCTTC 2305 CT AT G CA AAA A C G GC AGAACC AT CAT T TCAT T Sbjct: 54992 CTA-AT-GCCACATAAATAGTCTCAGAGCAAGAACCTGA--ATCCATG-TG-TCATAAT- 55044 Query: 2304 TTCTTCATCTTCATCTTCTTCATCTTCC 2277 TCTTCATCTT TCTTC T AT T CC Sbjct: 55045 -TCTTCATCTTATTCTTCCTGATATGCC 55071 Score = 125 (18.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05 Identities = 93/142 (65%), Positives = 93/142 (65%), Strand = Minus / Plus Query: 223 TAGGCTTTTT--TTTGCATCCTCAATTGGAAACTGTCTTTTAATTACCTTGTTAGCATGT 166 TA CTT TT TTT C CTCA TTG A CTGTCT TA T A T GT AG TGT Sbjct: 100623 TATCCTTGTTAATTTTCTGTCTCA-TTG--ATCTGTCTAATACTGA--TAGT-AGGGTGT 100676 Query: 165 TTTAAGCCCTCTTACCTTCCACCTCTCTGAG-C--ACT-TCTTAGAAAA-CTCTGAGAAG 111 T AAG C TC TAC T T T GAG C A T TCTT G A CTCT AGAA Sbjct: 100677 TA-AAGTC-TCCTACTATTATTATGTGGGAGTCTAAGTCTCTTTGTAGGTCTCTAAGAAC 100734 Query: 110 TTGACTGAAGCA-TCTGGGTGCTTCT-TCTT 82 TTG CT AG A TCTGGGTGCT CT T TT Sbjct: 100735 TTG-CTTTAGAAATCTGGGTGCTCCTGTATT 100764 >J03998 P.falciparum glutamic acid-rich protein gnen, complete cds. Length = 2384 Plus Strand HSPs: Score = 427 (64.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12 Identities = 129/170 (75%), Positives = 129/170 (75%), Strand = Plus / Plus Query: 2161 TATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AA 2218 TA GAG TA A GAA G TGA G AG A A A G AG TG A G GAA AA AA Sbjct: 2000 TAAAGAGGTACAAGAA-GA-TGAAGAAGAAGTAGAAGAAGATGAAGAAGAAGAAGAAGAA 2057 Query: 2219 GCA-AGAAA-AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGA 2276 G A AG AA AAGAAG AAGAGGA GAAGA GA GAAGA GAAGAGGA GA GA GA GA Sbjct: 2058 GAAGAGGAAGAAGAAG-AAGAGGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGA 2116 Query: 2277 GGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 GGAAGA GAAGAAGATGAAGATGAAGAAGA GA GATGATG TGAA AAG TG Sbjct: 2117 GGAAGAAGAAGAAGATGAAGATGAAGAAGATGAAGATGATGCTGAAGAAGATG 2169 Score = 386 (57.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10 Identities = 118/161 (73%), Positives = 118/161 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAG A AAG GA G AG A AA AGG AG G A G GAA AA AG AAGAA AA Sbjct: 2053 AAGAAGAAGAG-GAAGAAGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAA 2111 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG A GA GA GAAGA GA GAAGATGAAGA GATGA GA GA G GAAGA GA GA Sbjct: 2112 GAAG-AGGAAGAAGAAGAAGATGAAGATGAAGAAGATGAAGATGATGCTGAAGAAGATGA 2170 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 AGATGA G TGAAGAAGA GA GATGATG TGAA AAG TG T Sbjct: 2171 AGATGATGCTGAAGAAGATGAAGATGATGCTGAAGAAGATGAT 2213 Score = 385 (57.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10 Identities = 121/164 (73%), Positives = 121/164 (73%), Strand = Plus / Plus Query: 2158 GCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-A 2215 G A AT AG AAG A AAG GATG AG A AA A G AG G AGG GAA A Sbjct: 2013 GAAGATGAAGAAGAAGTAGAAGAA-GATGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGA 2071 Query: 2216 A-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 A AAG A GAA AAGA GGAAGA GA GAAGA GA GAAGA GAAGAGGA GA GA GA Sbjct: 2072 AGAAG-AGGAAGAAGA-GGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAA 2129 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GA GAAGATGAAGAAGATGAAGATGA G GAAGA GATGA GATGA Sbjct: 2130 GATGAAGATGAAGAAGATGAAGATGATGCTGAAGAAGATGAAGATGA 2176 Score = 378 (56.7 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10 Identities = 120/170 (70%), Positives = 120/170 (70%), Strand = Plus / Plus Query: 2161 TATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-A 2218 TA GAG TA A GAA A CT A G G A AA A G G G A G GAA AA A Sbjct: 1979 TAAAGAGGTACAAGAAGAATCTAAAGAGGTACAAGAAGATGAAGAAGAAGTAGAAGAAGA 2038 Query: 2219 GCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGG 2278 AAGAA AAGAAG AAGA GA GA GA GA GAAGA GA GA GA GAGGA GA GA G Sbjct: 2039 TGAAGAAGAAGAAG-AAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGGAAGAAGAAG 2097 Query: 2279 AAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 AAGA GAAGAAGA GAAGA GAAGAAGAAGA GATGA GATGAA AAG TG Sbjct: 2098 AAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGATGAAGATGAAGAAGATG 2148 Score = 375 (56.3 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10 Identities = 113/156 (72%), Positives = 113/156 (72%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAG-G-AAGAG 2238 GA G AG A AA A G AG G A G GAA AA AG AAGAA AAGAAG G AAGA Sbjct: 2025 GAAGTAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAA 2084 Query: 2239 GAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGAT 2298 GAGGAAGA GA GAAGA GAAGA GA GA GAGGA GA GAAGA GA GAAGATGAAGA Sbjct: 2085 GAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGATGAAGATGAAGAA 2144 Query: 2299 GAAGAAGAAGATGATGATGATGAATAAGTTGGTTCT 2334 GA GAAGA GATG TGA GA GA AAG TG T CT Sbjct: 2145 GATGAAGATGATGCTGAAGAAGATGAAGATGATGCT 2180 Score = 361 (54.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09 Identities = 119/168 (70%), Positives = 119/168 (70%), Strand = Plus / Plus Query: 2165 GAGCTA-AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCA 2221 GAG A AAG A AAG GA G AG AA A G AG G A G GAA AA AG A Sbjct: 2061 GAGGAAGAAGAAGAAGAG-GAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGA 2119 Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AGAA AAGAAG A GA GA GAAGA GA GAAGATGA G GA GA GA GA GA GA G Sbjct: 2120 AGAAGAAGAAG-ATGAAGATGAAGAAGATGAAGATGATGCTGAAGAAGATGAAGATGATG 2178 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 TGAAGAAGATGAAGATGA G GAAGA GATGATGATGAA AAG TG T Sbjct: 2179 CTGAAGAAGATGAAGATGATGCTGAAGAAGATGATGATGAAGAAGATGAT 2228 Score = 353 (53.0 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09 Identities = 109/153 (71%), Positives = 109/153 (71%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGA 2240 GA G AG A AA AGG AG G A G GAA AA AG AAGAA AAGAAG A GA GA Sbjct: 2049 GAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAG-AGGAAGA 2107 Query: 2241 GGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGA 2300 GAAGA GAGGAAGA GAAGA GATGA GA GA GA GA GA GA GA G TGAAGA GA Sbjct: 2108 AGAAGAAGAGGAAGAAGAAGAAGATGAAGATGAAGAAGATGAAGATGATGCTGAAGAAGA 2167 Query: 2301 AGAAGAAGATGATGATGATGAATAAGTTGGTTCT 2334 GAAGA GATG TGA GA GA AAG TG T CT Sbjct: 2168 TGAAGATGATGCTGAAGAAGATGAAGATGATGCT 2201 Score = 352 (52.8 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09 Identities = 116/162 (71%), Positives = 116/162 (71%), Strand = Plus / Plus Query: 2165 GAGCTA-AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAA 2222 GAG A AAG A AAG GA G AG A AA A G AG TG A G TGAA A G A Sbjct: 2100 GAGGAAGAAGAAGAAGAG-GAAGAAGAAGAAGATGAAGATGAAGAAGATGAAGAT-G-AT 2156 Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 G AAGAAG A GA GA GA G TGA GAAGATGAAGA GATG GA GA GA GA GA Sbjct: 2157 GCTGAAGAAG-ATGAAGATGATGCTGAAGAAGATGAAGATGATGCTGAAGAAGATGATGA 2215 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 TGAAGAAGATGA GATGAAGAAGA GATGATGA GATGAA A G Sbjct: 2216 TGAAGAAGATGATGATGAAGAAGATGATGATGAAGATGAAGATG 2259 Score = 347 (52.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08 Identities = 119/162 (73%), Positives = 119/162 (73%), Strand = Plus / Plus Query: 2165 GAGCTA-AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAA 2222 GAG A AAG A AAG TGA G G A AA A G AG TG A GCTGAA AA G A Sbjct: 2115 GAGGAAGAAGAAGAAGA-TGAAGATGAAGAAGATGAAGATG---ATGCTGAAGAA-G-AT 2168 Query: 2223 GAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 GAA A GA G GAAGA GA GAAGATGA G GA GAAGA GATGA GA GA GA GA Sbjct: 2169 GAAGATGATGCTGAAGAAGATGAAGATGATGCTGAAGAAGATGATGATGAAGAAGATGAT 2228 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GATGAAGAAGATGA GATGAAGA GAAGATGA GATGA GAA A G Sbjct: 2229 GATGAAGAAGATGATGATGAAGATGAAGATGAAGATGAAGAAGATG 2274 Score = 347 (52.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08 Identities = 127/184 (69%), Positives = 127/184 (69%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGA-GCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAG A AT G G AT GA G T AAG A CTGA G AG AA A G G TG Sbjct: 2124 GAAGAAGAT-GAAG-ATGAAGAAGATGAAGATGATGCTGAAGAAGATGAAGATGATGCTG 2181 Query: 2204 TCAAGGCTGAAAAA-A-GCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAA 2259 A G TGAA A A GC GAA AAGA G GA GA GA GA GATGA GAAGA GA Sbjct: 2182 AAGAAGATGAAGATGATGCT-GAAGAAGATGATGATGAAGAAGATGATGATGAAGAAGAT 2240 Query: 2260 GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGAT 2319 GA GATGA GA GA GA GAAGATGAAGAAGATGAAGA GAAGAAGAAGA GA GA GA Sbjct: 2241 GATGATGAAGATGAAGATGAAGATGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAA 2300 Query: 2320 GAATAAG 2326 GAAT AG Sbjct: 2301 GAATCAG 2307 Score = 345 (51.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08 Identities = 115/164 (70%), Positives = 115/164 (70%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGC--AAGAAA 2226 AAG A AG GA G AG A A A G AG G AGG GAA AA AAG AAGA Sbjct: 2080 AAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGATGAAGATG 2139 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AAGAAG A GA GA GA G TGA GAAGATGAAGA GATG GA GA GA GAAGATGA Sbjct: 2140 AAGAAG-ATGAAGATGATGCTGAAGAAGATGAAGATGATGCTGAAGAAGATGAAGATGAT 2198 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 G GA GAAGATGA GA GAAGA GATGATGATGAA AAG TG T Sbjct: 2199 GCTGAAGAAGATGATGATGAAGAAGATGATGATGAAGAAGATGAT 2243 Score = 337 (50.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08 Identities = 119/171 (69%), Positives = 119/171 (69%), Strand = Plus / Plus Query: 2155 GCTGCATATCGA-GCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGA 2213 G TG A AT GA GCT AAG A A GATG GC AA A G G G A GCTGA Sbjct: 2145 GATGAAGAT-GATGCTGAAGAAGATGAAGATGATGCTGAAGAAGATGAAGATGATGCTGA 2203 Query: 2214 AAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGG 2272 A AA A A GA AAGAAG A GA GA GAAGA GA GA GATGAAGA GA GA GA G Sbjct: 2204 AGAAGATGATGATGAAGAAG-ATGATGATGAAGAAGATGATGATGAAGATGAAGATGAAG 2262 Query: 2273 AGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 A GA GAAGATGAAGAAGA GAAGA GAAGAAGAAGA GA AT A GAA AA Sbjct: 2263 ATGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGA--ATCA-GAAAAA 2312 Score = 334 (50.1 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08 Identities = 110/156 (70%), Positives = 110/156 (70%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAG--CAAGAAAAA 2228 AAG AA GA G A C AAA AGG A G A CT AAA A G CAAGAA A Sbjct: 1960 AAGACAAAAAAGAAGAATCTAAAGAGGTACAAGAAGAATCT-AAAGAGGTACAAGAAGAT 2018 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG AAGA G GAAGA GA GAAGA GAAGA GA GA GA GAGGA GAAGA GAAGA Sbjct: 2019 GAAG-AAGAAGTAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGA 2077 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 2078 GGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAG 2115 Score = 331 (49.7 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08 Identities = 115/165 (69%), Positives = 115/165 (69%), Strand = Plus / Plus Query: 2165 GAGCTA-AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAA 2222 GAG A AAG A AAG GA G AG A AA AGG AG G A G TGAA A G AA Sbjct: 2085 GAGGAAGAAGAAGAAGAG-GAAGAAGAAGAAGAGGAAGAAGAAGAAGATGAAGAT-G-AA 2141 Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GAA A GAAG A GA G GAAGA GA GAAGATGA G GA GA GA GA GA GA G Sbjct: 2142 GAAGATGAAG-ATGATGCTGAAGAAGATGAAGATGATGCTGAAGAAGATGAAGATGATGC 2200 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 TGAAGAAGATGA GATGAAGAAGA GATGATGA GA GA A G TG Sbjct: 2201 TGAAGAAGATGATGATGAAGAAGATGATGATGAAGAAGATGATGATG 2247 Score = 310 (46.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07 Identities = 118/169 (69%), Positives = 118/169 (69%), Strand = Plus / Plus Query: 2160 ATATCGA-GCTAAAGGAAAGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAA 2217 AT CGA G TA AGGAA GC TGA C CAAAAA AG A TGT A GAA AA Sbjct: 1905 ATGGCGAAGATAGAGGAA-GC-TGAA-CTTCAAAAACAGAAACATGTTGATAAGGAAGAA 1961 Query: 2218 AGCAAGAAA-AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGA 2276 CAA AAA AAGAA A AG AGG A A GA GAA T AAGAGG A GA GA GA Sbjct: 1962 GACAAAAAAGAAGAATCTAAAG-AGGTACAAGAAGAATCTAAAGAGGTACAAGAAGATGA 2020 Query: 2277 GGAAGA--T-GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA T GAAGAAGATGAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 2021 AGAAGAAGTAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAG 2073 Score = 257 (38.6 bits), Expect = 0.00012, Sum P(2) = 0.00012 Identities = 105/158 (66%), Positives = 105/158 (66%), Strand = Plus / Plus Query: 2155 GCTGCATATCGA-GCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTG-TCAAGGCTG 2212 G TG A AT GA GCT AAG A A GATG GC AA A G G TG T AAG G Sbjct: 2166 GATGAAGAT-GATGCTGAAGAAGATGAAGATGATGCTGAAGAAGATGATGATGAAGAA-G 2223 Query: 2213 AAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGG 2272 A A G A GAA AAGA G A GA GA GA GA GA GAAGATGAAGA GATGA GA G Sbjct: 2224 ATGAT-G-ATGAAGAAGATG-ATGATGAAGATGAAGATGAAGATGAAGAAGATGAAGAAG 2280 Query: 2273 AGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGA 2312 A GA GAAGA GAAGAAGA GAA GAA AA AA AT A Sbjct: 2281 AAGAAGAAGAAGAAGAAGAAGAATCAGAAAAAAAA-ATAA 2319 Score = 252 (37.8 bits), Expect = 0.00020, Sum P(2) = 0.00020 Identities = 120/190 (63%), Positives = 120/190 (63%), Strand = Plus / Plus Query: 2138 TGCTTTGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGG 2197 TGCT GAAG AT G TG AT GA A A GAA G TGATGC G A AA A G Sbjct: 2156 TGCTGAAGAAG-ATGAAGATG-ATGCTGAAGAAGATGAA-GA-TGATGCTGAAGAAGATG 2211 Query: 2198 GAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATG 2257 G TG A G TGA A G AAGAA A GA G A GA GA GAAGATGA GA GA G Sbjct: 2212 ATGATGAAGAAGATGATGAT-G-AAGAAGATGATG-ATGAAGATGAAGATGAAGATGAAG 2268 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAG-AAGATGATGAT 2316 AAGA GA GA GA GA GA GAAGA GAAGAAGA AGA AA AA AA A GA T Sbjct: 2269 AAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCAGAAAAAAAAATAAAAAGAAATT 2328 Query: 2317 -GATGAATAAGT 2327 GA GAA AA T Sbjct: 2329 TGA-GAAAAAAT 2339 Score = 201 (30.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12 Identities = 165/273 (60%), Positives = 165/273 (60%), Strand = Plus / Plus Query: 1478 TAATATAGGCTATATTTTTCTTAGTCATATCCTGAAACATTTATGTTCTTTTCCTTTAGA 1537 TAATAT G TAT TTTT TT GT TAT C ACATT A TT TT T CT AG Sbjct: 124 TAATATTTG-TATTCTTTTTTTTGTTGTATGC----ACATTAAATTT-TTCTACTA-AGG 176 Query: 1538 TACTCAAAAAACCACAGCATCACTAAGTTAAATTACA-AGTCTGCTGCTCTGTCCAGTAA 1596 TA CAAAAA A G A C T TTA TTA A AGT T T T T A T Sbjct: 177 TAA-CAAAAATATAT-GAA-CGTTTT-TTA--TTATATAGTATAGAAATTT-TATATTCT 229 Query: 1597 ATTAATAAGATTA-AGGAAATCTATAACTCTTATAGTTCAGTAAATTGAAATATTAAATA 1655 TT A AA TTA A AAAT T TA C C T TA T A TAA TG ATA TA AT Sbjct: 230 TTTTAAAATGTTATAATAAATATGTA-CACATCTAATATATTAATATGTTATAATATATT 288 Query: 1656 CTTAATTT-TCAGC-TTTAGTC-ATTCTGAAAAGTGTTTATTTCTAGATGTTTCTTA-AC 1711 TTAA T T GC TTT GT ATT T AA T TTAT T TA AT T T TTA A Sbjct: 289 TTTAAAATCTTTGCATTTTGTGTATTTTCCTAATTTATTATATATATATATAT-TTACAT 347 Query: 1712 CTA-ATTG-CATGTTTATTGACAAAT-TACCTTTTTTTTTTA 1750 TA ATT CAT TTTAT A A AT T TTTTTTTTTTA Sbjct: 348 ATATATTTACATATTTATA-ATATATATGTATTTTTTTTTTA 388 Score = 176 (26.4 bits), Expect = 0.44, Sum P(2) = 0.35 Identities = 88/139 (63%), Positives = 88/139 (63%), Strand = Plus / Plus Query: 2190 AAAAAAGGGAGTTGTCAAGGCTGA-AAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATG 2248 AAAAAAG AG G AAGG A AAAAA CAAGAAAAAGAA GAA A A AAGA Sbjct: 1160 AAAAAAGCAAGAAGAAAAGGAAAAGAAAAAACAAGAAAAAGAAAGAAAAAAAC-AAGAAA 1218 Query: 2249 AGGAAGAT-GAAGAGGATGAGGAGGAGGAG-GAAGATGAAGAAGATGA-AGATGAAGAA- 2304 AG AAGA G A A A AG A AG A GAA A A AA A A AGA AAGAA Sbjct: 1219 AGAAAGAACGTAAACAAAAAGAAAAAGAAATGAAAAAACAAAAAAAAATAGAAAAAGAAA 1278 Query: 2305 GAAGATGATGATGATGAATAAG 2326 GAA A A A GA GAA AAG Sbjct: 1279 GAAAAA-AGAAAGAAGAA-AAG 1298 >U83985 Rattus norvegicus alpha 1B adrenergic receptor gene, 5' upstream Length = 513 Plus Strand HSPs: Score = 397 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10 Identities = 135/187 (72%), Positives = 135/187 (72%), Strand = Plus / Plus Query: 2141 TTTGGAAGGA-TATTG--CTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGG 2197 TTTGGA G A T TTG CT CATA GAG T AAG AG TGA GC CA A A G Sbjct: 47 TTTGGA-GCAGTCTTGGCCTACATAATGAGTTCAAGACTAGTGTGA-GCGACACAGCAAG 104 Query: 2198 GAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGA 2255 GTC A G GAA AA AAG AAGAA AAGAAG AAGA GA GAAGA GA GAAGA Sbjct: 105 ACCCAGTCCAAGAAGAAGAAGAAG-AAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGA 162 Query: 2256 TGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 GAAGA GA GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA Sbjct: 163 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 222 Query: 2316 TGATGAATAAG 2326 GA GAA AAG Sbjct: 223 AGAAGAAGAAG 233 Score = 392 (58.8 bits), Expect = 3.0e-10, P = 3.0e-10 Identities = 136/190 (71%), Positives = 136/190 (71%), Strand = Plus / Plus Query: 2141 TTTGGAAGGA-TATTG--CTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGG 2197 TTTGGA G A T TTG CT CATA GAG T AAG AG TGA GC CA A A G Sbjct: 47 TTTGGA-GCAGTCTTGGCCTACATAATGAGTTCAAGACTAGTGTGA-GCGACACAGCAAG 104 Query: 2198 GAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGAA 2253 GTC A G GAA AA AAG AAGAA AAGAAG GAAGA GA GAAGA GA GAA Sbjct: 105 ACCCAGTCCAAGAAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 163 Query: 2254 GATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGAT 2313 GA GAAGA GA GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA Sbjct: 164 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 223 Query: 2314 GATGATGAATAAG 2326 GA GA GAA AAG Sbjct: 224 GAAGAAGAAGAAG 236 Score = 342 (51.3 bits), Expect = 5.6e-08, P = 5.6e-08 Identities = 112/152 (73%), Positives = 112/152 (73%), Strand = Plus / Plus Query: 2175 AAAGCCTGATGCAG-CAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGG 2233 A AGC GA CAG C AA AAG AG G AAG GAA AA G AAGAA AAGAAG Sbjct: 97 ACAGCAAGACCCAGTCCAAGAAGA-AGAAG--AAGAA-GAAGAA-G-AAGAAGAAGAAG- 149 Query: 2234 AAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATG 2293 AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGAAGA G Sbjct: 150 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 209 Query: 2294 AAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 210 AAGAAGAAGAAGAAGAAGAAGAAGAAGAA-AAG 241 Score = 289 (43.4 bits), Expect = 0.00018, P = 0.00018 Identities = 117/171 (68%), Positives = 117/171 (68%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 174 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 231 Query: 2228 AGAAGGAA-GAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AGAAG AA GA GA GAAGA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA GA Sbjct: 232 AGAAGAAAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG 291 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGC-GCAG 2341 GA GA GA GA GA GA G GA AT A AAT GTT G CTA C GCAG Sbjct: 292 GAGGAGGAGGAGGAGGAGGGCCGGGAA-ATAAGTAATT-GTTTGA-CTATCAGCAG 344 >AF031904;U46930 Plasmodium berghei nucleosome assembly protein (pbB7) gene, Length = 3160 Plus Strand HSPs: Score = 320 (48.0 bits), Expect = 0.00024, P = 0.00024 Identities = 182/289 (62%), Positives = 182/289 (62%), Strand = Plus / Plus Query: 2207 AGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 A G TGAA A A AAGA AAGA G A GA A GAAGATGA GA GA GA GA GAT Sbjct: 2674 ATGATGAAGATGATGAAGATGAAGATG-ATGAAAATGAAGATGAAGATGAAGATGATGAT 2732 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGA-TGAATA 2324 GA GA A GA GAAGATGAAGA GATGAAGATG A AAGA ATGATGAT A T AATA Sbjct: 2733 GAAGAAAATGAAGAAGATGAAGATGATGAAGATGGAAAAGATAATGATGATTAATAAATA 2792 Query: 2325 AGTTGGTTCTAGCGC-AGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACA 2383 A TTG T TA A T T C CTAT A C TTA C TA A Sbjct: 2793 AATTGATCATAAAAATAATAATAAAAAACAAAACTATTTATCTATTA--CTTAAAATA-A 2849 Query: 2384 CAACT-CACTCCTTT-TAAAGAAAAAAATTGAA--ATGTAAG-GCTGTGTAAGATTTGTT 2438 AA T CACT T T TAAA AA AAATT AA ATGTA G GC GT T GATT T Sbjct: 2850 TAAATACACTAATGTATAAACCAAGAAATTTAATCATGTATGTGC-GT-TGCGATTC-TA 2906 Query: 2439 TTTAAACTGTACAGTGTCTTTTTT-TGTATAGTTAACACACTACCGAATGTGTCTTTA 2495 T TA TG AC T T T TT T TGT TA TT T CCGA T T TCTTTA Sbjct: 2907 TGTA---TGCACTCTTTATATTGTGTGTGTACTTTTTTTT-TCCCGA-TATATCTTTA 2959 Score = 309 (46.4 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10 Identities = 161/262 (61%), Positives = 161/262 (61%), Strand = Plus / Plus Query: 2236 GAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAA 2295 GA GA GAAGATGA GAAGATGAAGA GATGA A GA GA GAAGATGAAGA GATGA Sbjct: 2673 GATGATGAAGATGATGAAGATGAAGATGATGAAAATGAAGATGAAGATGAAGATGATGAT 2732 Query: 2296 GATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCA-GTTTTTTTTTTCTT 2354 GA GAA A GAAGA GATGA GATGA AAG TGG AG A G T TT T T Sbjct: 2733 GAAGAAAATGAAGAAGATGAAGATGATGAAGATGGAAA-AGATAATGATGATTAATAAAT 2791 Query: 2355 GTCT--ATAAAGCATTTAACCCCCCTGTACACAACTCACTC-CTTTTAAAGAAAAAAATT 2411 T AT A A TAA ACA AACT T CT TTA AAAA AAT Sbjct: 2792 AAATTGATCATAAAAATAATAATAAAAAACAAAACTATTTATCTATTACTTAAAATAAT- 2850 Query: 2412 GAAATGTAAGGCTGTGTAAGATTTGTT-TTTAAAC-TGTACAGTGTCTTTTT-TTGTATA 2468 AAAT A TGT TAA G TTTAA C TGTA GTG TT TT TAT Sbjct: 2851 -AAATACACTAATGTATAAACCAAGAAATTTAATCATGTAT-GTGCGTTGCGATTCTAT- 2907 Query: 2469 GTTAACACACTACCGAATGTGTCTTTA 2495 GT CAC CT A TGTGT T TA Sbjct: 2908 GTATGCACTCTTTATATTGTGTGTGTA 2934 Score = 280 (42.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10 Identities = 454/823 (55%), Positives = 454/823 (55%), Strand = Plus / Plus Query: 1510 TGAAAC-ATTTATGTTCTTTTCCTTTAGATACTCAAAAAACCACAGCATCACTAA-GTTA 1567 TGA AC ATTTAT T T AGA A T AA AAA A A A A AA GTTA Sbjct: 1929 TGATACCATTTATAAAAGACTT-TGAAGACAGT-AATAAATGAGAAAAAAAAAAATGTTA 1986 Query: 1568 AATTACAAGTC-TGCTG-CTCTGTCCAGTAAATTAATA-AGATTAAGGAAATCTATAACT 1624 AA AC A TC T TG C TGT C T ATTA TA A AT A AATC AT T Sbjct: 1987 AA--ACGA-TCATATTGACGTTGTGCT-TGCATTA-TATATATATATATAATCCATGT-T 2040 Query: 1625 CTTAT-AGTTCAGTAAA-TTGAAATATTAAATACT-TAATTTTCAGCTTTAGTCA-TTCT 1680 CTT T A TT TAAA TT AAAT TT T CT TAA TTT A TTT G CA TTC Sbjct: 2041 CTTTTTAATTTTATAAACTTCAAATGTTTG-T-CTGTAACTTT-ACATTT-G-CAGTTCA 2095 Query: 1681 GAAAAG-TGTTTATTTCT-AGATGTTTCTTAACCTAATTG-CATGTTTATTGACAAATTA 1737 AAA G T T A T AGAT T T C AT CA T A ACAAA A Sbjct: 2096 -AAAGGATATCGAACAATTAGATATAAAGTGTGCGCATGAACAAATGAACATACAAAA-A 2153 Query: 1738 CCTTTTTTTTTTAAGACCACATTTCCTACTAAGGATTAAGGTCTGACAGTGTAAACCTGT 1797 C T T T AAGA A A C T T A A AG T T A A T AAA T Sbjct: 2154 CAATATGATGAAAAGAAAAAACCCCTTTTTGATAAAAGAGATGTAATAATTCAAAAGGTT 2213 Query: 1798 AGAGTGCTTTTTTGCATTCAGAAGGTGGCAGTGTCTACCCTTTAATCA-A-AGTCTCTAC 1855 A TGCTTTT GCA A G A TC A C TT A T A A AGT C Sbjct: 2214 CCA-TGCTTTTGGGCAAATACCTTAAGAAAACATCCAGCATTAAGTGATATAGTACCAGA 2272 Query: 1856 AT-TCTGG-T-T-TTAATAGAGTTAGGATCTGGTAGATAATTGCACCTCAATGAGGCATA 1911 A T T G T T TTAA A TTA A CTG TAGAT TT A CAA GG ATA Sbjct: 2273 AGATATAGATATCTTAAATCATTTAACAACTG-TAGAT--TTAAAAGACAACATGG-ATA 2328 Query: 1912 ACTTTGCAA-ATATTAGACTA--TGC-CATTTCATGAGTTATAGATTGT-TATAATGATC 1966 AC TG A ATAT A A A T C CATTT ATGA A A G TATA GA C Sbjct: 2329 ACAATGGATCATATAAAATAACATTCACATTTAATGAAAAAGCAAAAGAATATATGGAGC 2388 Query: 1967 TTGTATTTTTATGTTCATTTATTGAAGTTCTAGTTATTTCTG-GAGTTGCT-GTGGA-TC 2023 T TA TTTTA GTT A AT AA T T T AT C GA G T GT GA T Sbjct: 2389 CTTTAGTTTTA-GTTAAAC-ATGTAACATTTGATAATAACCAAGAAAAGGTAGTTGAATG 2446 Query: 2024 TACA-GA-T-ACGTGATATTTTGGTATAACTAGAATCTTGATT-TCTTTCATAA-AGTTC 2078 TACA GA T A TG A GG A AA T AAT G T T T T ATA AG Sbjct: 2447 TACAAGAATTAAATGGAAAGAAGGAAAAAATCCAATAGCGGCTGTGTCTAATAGTAGAAT 2506 Query: 2079 TGCCAT-GTTCTATTTCTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTT 2137 G AT G T AT T CC AAT T T TT TT A TG TTTA C C Sbjct: 2507 AGATATAGATA-ATGAAATGCCCAAATGGTCTGTTTTTGA--A-TGGTTTA--CAACTGA 2560 Query: 2138 TGCTTTGGAAGGATATTGCTG--CATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAA 2195 G TT AAG ATA C G C T CGA TAA AAG AT GCA AA Sbjct: 2561 AGAATTACAAG-ATAAACCAGATCTTGGCGAAATAATTCGAAGAGAAATTTGGCATAATC 2619 Query: 2196 GGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGA 2255 T T CT A AG AAGA GA G A GA GAAGA GA GA Sbjct: 2620 CTTTATCTTATTATCTAGGATTAG-AAGATTTTGATG-ATTTTGACGAAGACTTTGATGA 2677 Query: 2256 TGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 TGAAGA GATGA GA GA GA GA GA A GAAGATGAAGATGAAGA GA GATGA GA Sbjct: 2678 TGAAGATGATGAAGATGAAGATGATGAAAATGAAGATGAAGATGAAGATGATGATGAAGA 2737 Query: 2316 TGATGAATAAGTTG 2329 ATGAA AAG TG Sbjct: 2738 AAATGAAGAAGATG 2751 Score = 270 (40.5 bits), Expect = 0.047, P = 0.046 Identities = 74/99 (74%), Positives = 74/99 (74%), Strand = Plus / Plus Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 | ||||| || ||||| || |||||||| || || || || | ||||||||||| | Sbjct: 2662 ACGAAGACTTTGATGATGAAGATGATGAAGATGAAGATGATGAAAATGAAGATGAAGATG 2721 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 | || ||||| |||||| |||| || |||||| | | || Sbjct: 2722 AAGATGATGATGAAGAAAATGAAGAAGATGAAGATGATG 2760 Score = 225 (33.8 bits), Expect = 5.4, P = 1.0 Identities = 65/90 (72%), Positives = 65/90 (72%), Strand = Plus / Plus Query: 2242 GAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAA 2301 |||||| || ||| || || || || || |||||||| |||||||||||||| Sbjct: 2643 GAAGATTTTGATGATTTTGACGAAGACTTTGATGATGAAGATGATGAAGATGAAGATGAT 2702 Query: 2302 GAAGAAGATGATGATGATGAATAAGTTGGT 2331 ||| | || ||||| |||||| | | || | Sbjct: 2703 GAAAATGAAGATGAAGATGAAGATGATGAT 2732 >M17284 Mouse transcriptional control element. Length = 309 Plus Strand HSPs: Score = 397 (59.6 bits), Expect = 2.9e-10, P = 2.9e-10 Identities = 137/187 (73%), Positives = 137/187 (73%), Strand = Plus / Plus Query: 2140 CTTTG-GAAGGATATTGCTGC-A-TATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAG 2196 C TTG GAA G TA GC GC A T CGA CT AAG A A C TGAT C AAAAAG Sbjct: 26 CGTTGTGAAAG-TAAGGCAGCCAGTGACGA-CTGAAG-ACA-CGTGAT-CTTTTAAAAAG 80 Query: 2197 GGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGA 2255 GA G AGG G A AA AG A GAA A GA GGA GAGGAGGAAGA GAGGAAGA Sbjct: 81 TGAAGAGG--AGGAAGCAGAAGAGGAGGAAGAGGA-GGAGGAGGAGGAAGAGGAGGAAGA 137 Query: 2256 TGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 GA GAGGA GAGGA GAGGAGGA GA GAAGAAGA GAAGA GAAGAAGAAGA GA GA Sbjct: 138 GGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 197 Query: 2316 TGATGAATAAG 2326 GA GAA AAG Sbjct: 198 AGAAGAAGAAG 208 Score = 382 (57.3 bits), Expect = 1.4e-09, P = 1.4e-09 Identities = 140/192 (72%), Positives = 140/192 (72%), Strand = Plus / Plus Query: 2140 CTTTG-GAAGGATATTGCTGC-A-TATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAG 2196 C TTG GAA G TA GC GC A T CGA CT AAG A A C TGAT C AAAAAG Sbjct: 26 CGTTGTGAAAG-TAAGGCAGCCAGTGACGA-CTGAAG-ACA-CGTGAT-CTTTTAAAAAG 80 Query: 2197 GGA-GTTGTCAAGGCTGAAAAA-AGCAAGAAAA--AG-A--AGGAAGAGGAGGAAGATGA 2249 GA G G A GC GAA A AG AAGA A AG A AGGAAGAGGAGGAAGA GA Sbjct: 81 TGAAGAGGAGGAAGCAGAAGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAAGAGGA 140 Query: 2250 GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGA 2309 GGA GA GA GA GA GAGGAGGAGGA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA Sbjct: 141 GGAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 200 Query: 2310 TGATGATGATGAATAAG 2326 GA GA GA GAA AAG Sbjct: 201 AGAAGAAGAAGAAGAAG 217 Score = 364 (54.6 bits), Expect = 9.3e-09, P = 9.3e-09 Identities = 112/154 (72%), Positives = 112/154 (72%), Strand = Plus / Plus Query: 2170 AAAG-GAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAA 2226 AAAG GAA AG GA GCAG A A AGG AG G AGG GA AA AG A GAA Sbjct: 77 AAAGTGAAGAGGAGGAAGCAGAAGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAAG 136 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 A GA GGA GAGGAGGAAGA GAGGA GA GAAGA GA GA GA GA GA GAAGA GAA Sbjct: 137 AGGA-GGAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 195 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GAAGA GAAGA GAAGAAGAAGA GA GA GA GA Sbjct: 196 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGA 230 Score = 347 (52.1 bits), Expect = 5.5e-08, P = 5.5e-08 Identities = 113/157 (71%), Positives = 113/157 (71%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AAAG AAG GA G AGCA AA AGG AG G AGG GA A G AG AA AG Sbjct: 77 AAAGTGAAGAG-GAGGAAGCAGAAGAGG-AG--GAAGAGGAGGAGGAG-G--AGGAAGAG 129 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 AGGAAGAGGAGGA GA GAGGAAGA GA GAGGA GA GA GA GA GAAGA GAAGAA Sbjct: 130 GAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAA 189 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GAAGA GAAGAAGAAGA GA GA GA GAA A G Sbjct: 190 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGG 226 Score = 329 (49.4 bits), Expect = 3.7e-07, P = 3.7e-07 Identities = 113/160 (70%), Positives = 113/160 (70%), Strand = Plus / Plus Query: 2170 AAAG-GAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAA 2226 AAAG GAA AG GA GCAG A A AGG AG G AGG GA AA AG A GAA Sbjct: 77 AAAGTGAAGAGGAGGAAGCAGAAGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAAG 136 Query: 2227 AAGA--AGGAAGAGGAGGA--AG-ATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 A GA AGGA GAGGA GA AG A GAGGAAGA GAAGA GA GA GA GA GA GAAG Sbjct: 137 AGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 196 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 A GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GA Sbjct: 197 AAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGA 236 Score = 307 (46.1 bits), Expect = 3.7e-06, P = 3.7e-06 Identities = 105/143 (73%), Positives = 105/143 (73%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAAA 2228 AGGAA AG GA G AG A AA GGAG G AGG GAA AA AAG AAGAA AA Sbjct: 131 AGGAAGAGGAGGAGG-AGGAGGAAGAGGAGGAGG--AGGAAGAAGAAGAAG-AAGAAGAA 186 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG AAGA GA GAAGA GA GAAGA GAAGA GA GAGGAGGAGGAGGA GA GA GA Sbjct: 187 GAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGA 245 Query: 2289 AGATGAAGATGAAGAAGAAGATGATG 2314 GA GA GA GA GAAG AG TGA G Sbjct: 246 GGAGGAGGAGGAGGAAGGAG-TGAAG 270 Score = 305 (45.8 bits), Expect = 4.5e-06, P = 4.5e-06 Identities = 107/151 (70%), Positives = 107/151 (70%), Strand = Plus / Plus Query: 2172 AGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAA--AAGCA-AGAAAA 2227 AGGAA GC GA G AG A AA GGAG G AGG GA A AAG AG A Sbjct: 89 AGGAA-GCA-GAAG-AGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAAGAGGAGGAGG 145 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AG AGGAAGAGGAGGA GA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 146 AGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 205 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 AAGA GAAGA GAAGAAGA GA GA GA GA GA Sbjct: 206 AAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGA 239 Score = 289 (43.4 bits), Expect = 2.4e-05, P = 2.4e-05 Identities = 79/104 (75%), Positives = 79/104 (75%), Strand = Plus / Plus Query: 2218 AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAG 2277 AG A GA AAGA GGA GAGGAGGAAGA GA GAAGA GAAGA GA GA GA GA GA Sbjct: 143 AGGAGGAGGAAGA-GGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 201 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GAAGA GAAGAAGA GAAGA GA GA GA GA GA GA GA GA Sbjct: 202 GAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGA 245 Score = 278 (41.7 bits), Expect = 7.7e-05, P = 7.7e-05 Identities = 92/125 (73%), Positives = 92/125 (73%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AGGAA AG GA G AG AA AA A G AG G A G GAA AA G AAGAA AAG Sbjct: 149 AGGAAGAGGAGGAGG-AGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-G-AAGAAGAAG 205 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 AAG AAGA GA GAAGA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA GAAG A Sbjct: 206 AAG-AAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGA 264 Query: 2290 GATGAAG 2296 G TGAAG Sbjct: 265 G-TGAAG 270 >Z50100 H.vulgare GAA-satellite DNA Length = 334 Plus Strand HSPs: Score = 363 (54.5 bits), Expect = 9.6e-09, P = 9.6e-09 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 78 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 135 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GAGGA GA GAGGAAGA GAA Sbjct: 136 AGAAG-AAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAGGAAGAAGAAT 194 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GA GA GA GAAGAAGA GA GA GA GAATAAG Sbjct: 195 AAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAATAAG 233 Score = 361 (54.2 bits), Expect = 1.2e-08, P = 1.2e-08 Identities = 113/156 (72%), Positives = 113/156 (72%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAG A AAG GA G AG AA A G A G AGG GAA AA A CAAGAA AA Sbjct: 18 AAGAAGAAGAG-GAAGAAGAGGAAGAAGAATAAGAAGAGGAAGAAGAAGAACAAGAAGAA 76 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGA Sbjct: 77 GAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 135 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 136 AGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAG 173 Score = 358 (53.7 bits), Expect = 1.6e-08, P = 1.6e-08 Identities = 116/159 (72%), Positives = 116/159 (72%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAA--AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA AGG AG G AGG GAA A AAG AAGAA A Sbjct: 138 AAGAAGAAGAA-GAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAGGAAG-AAGAATA 195 Query: 2228 AGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AGAAG GAAGAGGA GAAGA GA GAAGA GAA A GA GA GA A GA GAAGA GA Sbjct: 196 AGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAATAAGAAGAAGAATAAGAAGAAGAAGA 255 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 256 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 296 Score = 354 (53.1 bits), Expect = 2.5e-08, P = 2.5e-08 Identities = 114/156 (73%), Positives = 114/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA AGG AG G A G GAA AA AAG A GAA A Sbjct: 3 AAGAAGAAGAA-GAAGAAGAAGAAGAGGAAGAAGAGGAAGAAGAATAAGAAG-AGGAAGA 60 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AA A GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 61 AGAAG-AACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 119 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 120 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 158 Score = 354 (53.1 bits), Expect = 2.5e-08, P = 2.5e-08 Identities = 114/156 (73%), Positives = 114/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 84 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 141 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GAGGAAGA GAAGAGGA GA GAGGA GA GAA A GAAG Sbjct: 142 AGAAG-AAGAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAGGAAGAAGAATAAGAAG 200 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GA GA GA GAAGAAGAAGA GA GA A GAA AAG Sbjct: 201 AGGAAGAGGAAGAAGAAGAAGAAGAAGAATAAGAAGAAG 239 Score = 351 (52.7 bits), Expect = 3.4e-08, P = 3.4e-08 Identities = 117/159 (73%), Positives = 117/159 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAA 2226 AAG A AAG GA G AG AA AA AGG AG G A G GA AA AAG AAGAA Sbjct: 12 AAGAAGAAGAA-GAAG-AGGAAGAAGAGGAAGAAGAATAAGAAGAGGAAGAAG-AAGAAC 68 Query: 2227 AAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 AAGAAG GAAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA G Sbjct: 69 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 128 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 129 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAG 170 Score = 347 (52.1 bits), Expect = 5.1e-08, P = 5.1e-08 Identities = 113/159 (71%), Positives = 113/159 (71%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAG A AAG GA G AG A AA A G AG G A G GAA AA AG AAGAA AA Sbjct: 114 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAA 172 Query: 2229 GAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 GA G GAAGAGGA GAAGA A GAAGA GAAGAGGA GA GA GA GA GAAGA AA Sbjct: 173 GAGGAAGAAGAGGAAGAAGAATAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAATAA 232 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA GAA A GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 233 GAAGAAGAATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 272 Score = 343 (51.5 bits), Expect = 7.8e-08, P = 7.8e-08 Identities = 113/156 (72%), Positives = 113/156 (72%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAG A AAG GA G AG A AA AGG AG G AAG GAA AA AG AAGAA AA Sbjct: 138 AAGAAGAAGAA-GAAGAAGAAGAAGAGGAAGAAG--AAGAG-GAAGAAGAGGAAGAAGAA 193 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 AAG AAGAGGA GA GA GA GAAGA GAAGA GA A GA GA GA AAGA GAAGA Sbjct: 194 TAAG-AAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAATAAGAAGAAGAATAAGAAGAAGA 252 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 253 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 290 Score = 341 (51.2 bits), Expect = 9.6e-08, P = 9.6e-08 Identities = 111/156 (71%), Positives = 111/156 (71%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AAG A AAG GA G AG A AA A G AG G AGG GAA AA G A GAA AAG Sbjct: 126 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAA-G-AGGAAGAAG 182 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 A GGAAGA GA AAGA GAGGAAGA GAAGA GA GA GA GA GA AAGA GAAGAA Sbjct: 183 A-GGAAGAAGAATAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAATAAGAAGAAGAA 241 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 242 TAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 278 Score = 341 (51.2 bits), Expect = 9.6e-08, P = 9.6e-08 Identities = 111/156 (71%), Positives = 111/156 (71%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AAG A AAG GA G AG A AA AGG AG G A G GAA AA G AAGA AAG Sbjct: 150 AAGAAGAAGAA-GAGGAAGAAGAAGAGGAAGAAGAGGAAGAAGAATAA-G-AAGAGGAAG 206 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 A GGAAGA GA GAAGA GA GAA A GAAGA GA A GA GA GA GAAGA GAAGAA Sbjct: 207 A-GGAAGAAGAAGAAGAAGAAGAATAAGAAGAAGAATAAGAAGAAGAAGAAGAAGAAGAA 265 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 266 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAG 302 Score = 339 (50.9 bits), Expect = 1.2e-07, P = 1.2e-07 Identities = 109/156 (69%), Positives = 109/156 (69%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 AAG A AG GA G A A AA AGG AG G A G GAA AA G AAGAA AAGA Sbjct: 177 AAGAAGAGGAAGAAGAATAAGAAGAGGAAGAGGAAGAAGAAGAAGAA-G-AAGAATAAGA 234 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 AG AAGA A GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGAAG Sbjct: 235 AG-AAGAATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 293 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GAA A GAAGAAGAAGA GA G GA GAA AAG Sbjct: 294 AAGAAAAAGAAGAAGAAGAAGAAGTGGAAGAAGAAG 329 Score = 337 (50.6 bits), Expect = 1.5e-07, P = 1.5e-07 Identities = 115/161 (71%), Positives = 115/161 (71%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAA 2227 A AGGAA G GA G AG AA AA AGG AG G A G GA AA AG AAGAA A Sbjct: 160 AGAGGAA-GAA-GAAG-AGGAAGAAGAGGAAGAAGAATAAGAAGAGGAAGAGGAAGAAGA 216 Query: 2228 AGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AGAAG GAAGA A GAAGA GA AAGA GAAGA GA GA GA GA GA GAAGA GA Sbjct: 217 AGAAGAAGAAGAATAAGAAGAAGAATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 276 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 AGAAGA GAAGA GAAGAAGAA A GA GA GA GAA AAGT G Sbjct: 277 AGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGTGG 320 Score = 305 (45.8 bits), Expect = 4.2e-06, P = 4.2e-06 Identities = 99/142 (69%), Positives = 99/142 (69%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 AAG A AG GA G AG A AA A G AG G A G GAA AA AAGAA AAGA Sbjct: 195 AAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAATAAGAAGAAGAAT--AAGAAGAAGA 252 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 AG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA AAGA GAAGAAG Sbjct: 253 AG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAG 311 Query: 2291 ATGAAGATGAAGAAGAAGATGA 2312 A GAAG GAAGAAGAAGA GA Sbjct: 312 AAGAAGTGGAAGAAGAAGAGGA 333 Score = 244 (36.6 bits), Expect = 0.0025, P = 0.0025 Identities = 64/83 (77%), Positives = 64/83 (77%), Strand = Plus / Plus Query: 2244 AGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGA 2303 ||| || ||||| ||||| || || ||||| || || || |||||| | ||||| ||||| Sbjct: 1 AGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAAGAAGAATAAGAAGAGGAAGA 60 Query: 2304 AGAAGATGATGATGATGAATAAG 2326 |||||| | || || ||| ||| Sbjct: 61 AGAAGAACAAGAAGAAGAAGAAG 83 >E10125 DNA encoding an immunogenicity protein. Length = 2069 Plus Strand HSPs: Score = 413 (62.0 bits), Expect = 1.1e-08, P = 1.1e-08 Identities = 121/161 (75%), Positives = 121/161 (75%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAG 2223 AG AAAG AA C TGA G AG A AAAA G AG G AGG GAA AA AAG AAG Sbjct: 1533 AGAAAAAGTAATACATGAAGAAGAAGAAAAAGAAGAAGATGAGGAAGAAGAAGAAG-AAG 1591 Query: 2224 AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 AA AAGAAG AAGAGGA GAAGA GA GAAGA GA GAGGA GAGGA GA GA GAAGA Sbjct: 1592 AAGAAGAAG-AAGAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGGAAGAAGAAGAAGAA 1650 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA GA GAAGA GAAGAAGAAGA GA ATGA GAA AAG Sbjct: 1651 GAAGATGAGGAAGAGGAAGAAGAAGAAGAAAATGAGGAAGAAG 1693 Score = 395 (59.3 bits), Expect = 7.4e-08, P = 7.4e-08 Identities = 119/161 (73%), Positives = 119/161 (73%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTG-TCAAGGCTGA-AAAAAGCAAG 2223 AG AAAG AA C TGA G AG A AAAA G A T T AAG A AAAAAG AAG Sbjct: 1509 AGAAAAAGTAACACATGAAGAAGAAGAAAAAGTAATACATGAAGAAGAAGAAAAAG-AAG 1567 Query: 2224 AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 AA A GA GGAAGA GA GAAGA GA GAAGA GAAGAGGA GA GA GA GA GAAGAT Sbjct: 1568 AAGATGA-GGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAT 1626 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GAAGA GAAGA GAAGAAGAAGA GATGA GA GA AAG Sbjct: 1627 GAGGAAGAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGGAAG 1669 Score = 374 (56.1 bits), Expect = 6.9e-07, P = 6.9e-07 Identities = 128/181 (70%), Positives = 128/181 (70%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGT 2204 AAG A AT TG A A AG AAAG A AAG TGA G AG A AA A G AG G Sbjct: 1538 AAGTA-ATACATGAAGAAGAAGAAAAAGAAGAAGA-TGAGGAAGAAGAAGAAGAAGAAGA 1595 Query: 2205 CAAGGCTGAA-AA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 A G GA AA AAG AAGAA AAGAAG A GAGGA GA GA GA GAAGA GAAGA Sbjct: 1596 AGAAGAAGAGGAAGAAG-AAGAAGAAGAAG-ATGAGGAAGAGGAAGAAGAAGAAGAAGAA 1653 Query: 2263 GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 GATGAGGA GAGGA GAAGA GAAGAA ATGA GA GAAGAAGAAGA GA AT A GAA Sbjct: 1654 GATGAGGAAGAGGAAGAAGAAGAAGAAAATGAGGAAGAAGAAGAAGAAGAAAATAAGGAA 1713 Query: 2323 TAAG 2326 AAG Sbjct: 1714 GAAG 1717 Score = 361 (54.2 bits), Expect = 2.7e-06, P = 2.7e-06 Identities = 127/182 (69%), Positives = 127/182 (69%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTA-AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTT 2202 GAAG A A G G A AT GAG A AAG A AAG GA G AG A AA AGG AG Sbjct: 1555 GAAGAAAAA-GAAGAAGAT-GAGGAAGAAGAAGAAGAA-GAAGAAGAAGAAGAGGAAGAA 1611 Query: 2203 GTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA 2261 G A G GAA A AG AAGA AAGAAG AAGA GA GAAGATGAGGAAGA GAAGA Sbjct: 1612 GAAGAAGAAGAAGATGAGGAAGAGGAAGAAG-AAGAAGAAGAAGATGAGGAAGAGGAAGA 1670 Query: 2262 GGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GA GA GA A GAGGAAGA GAAGAAGA GAA AT A GAAGAAGA GA GA GA A Sbjct: 1671 AGAAGAAGAAAATGAGGAAGAAGAAGAAGAAGAAAATAAGGAAGAAGAAGAAGAAGAAAA 1730 Query: 2322 ATAAG 2326 A AAG Sbjct: 1731 AGAAG 1735 Score = 348 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05 Identities = 114/161 (70%), Positives = 114/161 (70%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCA-AAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGA 2224 AG AAAG AA C TGA G AG A AAAAAG A T AAG GAA AAA AAG Sbjct: 1485 AGAAAAAGTAACACATGAAGAAGAAGAAAAAGTAACACATGAAGAA-GAAGAAA--AAGT 1541 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 AA A A G AAGA GA GAA A GA GAAGATGA GA GA GA GA GA GA GAAGA G Sbjct: 1542 AATACATG-AAGAAGAAGAAAAAGAAGAAGATGAGGAAGAAGAAGAAGAAGAAGAAGAAG 1600 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GA GAAGA GAAGAAGAAGATGA GA GA GAA AAG Sbjct: 1601 AAGAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGGAAGAAG 1642 Score = 329 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05 Identities = 113/156 (72%), Positives = 113/156 (72%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AAG A AAG GA G AG A AA A G AG G AGG GA AA G AAGAA AAG Sbjct: 1592 AAGAAGAAGAA-GAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGGAA-G-AAGAAGAAG 1648 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA- 2288 AAG AAGA GAGGAAGA GA GAAGA GAAGA ATGAGGA GA GA GAAGA GAA A Sbjct: 1649 AAG-AAGATGAGGAAGAGGAAGAAGAAGAAGAAAATGAGGAAGAAGAAGAAGAAGAAAAT 1707 Query: 2289 -AG-ATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AG A GAAGA GAAGAAGAA A GA GA ATGAA AAG Sbjct: 1708 AAGGAAGAAGAAGAAGAAGAAAAAGAAGAGCATGAAGAAG 1747 Score = 326 (48.9 bits), Expect = 0.00011, P = 0.00011 Identities = 116/167 (69%), Positives = 116/167 (69%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCA-AAAAAGGGAGTTGTCAAGGCTGA-AAAAAGCAAG 2223 AG AAAG AA C TGA G AG A AAAAAG A T AAG A AAAAAG AA Sbjct: 1461 AGAAAAAGTAACACATGAAGAAGAAGAAAAAGTAACACATGAAGAAGAAGAAAAAGTAAC 1520 Query: 2224 AAAAAGAAGGAAGAGGAGGAAG-A-TG-AGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 A A GAAG AAGA GA AAG A T A GAAGA GAAGA A GA GA GA GAGGAA Sbjct: 1521 ACAT-GAAG-AAGAAGAAAAAGTAATACATGAAGAAGAAGAAAAAGAAGAAGATGAGGAA 1578 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 GA GAAGAAGA GAAGA GAAGAAGA GA GA GA GA GAA AAG TG Sbjct: 1579 GAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGATG 1627 Score = 300 (45.0 bits), Expect = 0.0018, P = 0.0018 Identities = 110/156 (70%), Positives = 110/156 (70%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAG A AAG TGA G AG AA A G AG G A G TGA AA AG AAGAA AA Sbjct: 1616 AAGAAGAAGA-TGAGGAAGAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGGAAGAAGAA 1674 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG AA A GAGGAAGA GA GAAGA GAA A AT AGGA GA GA GAAGA GAA A Sbjct: 1675 GAAGAAA-ATGAGGAAGAAGAAGAAGAAGAA-A--ATAAGGAAGAAGAAGAAGAAGAAAA 1730 Query: 2289 AGATGAAGATGAAGAAGAAGATGATG-ATGATGAATAAG 2326 AGA GA ATGAAGAAGAAG T A ATGA GAA AAG Sbjct: 1731 AGAAGAGCATGAAGAAGAAG-TAACACATGAAGAAGAAG 1768 Score = 284 (42.6 bits), Expect = 0.0096, P = 0.0096 Identities = 122/182 (67%), Positives = 122/182 (67%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGT 2204 GAAG A A G G A AT GAG A AGGAA G GA G AG AAA AGG AG G Sbjct: 1639 GAAGAAGAA-GAAGAAGAT-GAGGAAGAGGAA-GAA-GAAGAAGAAAATGAGGAAGAAGA 1694 Query: 2205 CAAGGCTGAAAA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG--A 2261 A G GAAAA AAG AAGAA AAGAAG AAGA A GAAGA A GAAGA GAAG A Sbjct: 1695 AGAAGAAGAAAATAAGGAAGAAGAAGAAG-AAGAAAAAGAAGAGCATGAAGAAGAAGTAA 1753 Query: 2262 GG-ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG-ATGAT 2319 ATGA GA GA GA GAA A G A A ATGAAGA GAAGAA AAG T A ATGA Sbjct: 1754 CACATGAAGAAGAAGAAGAAAAAGTAACACATGAAGAAGAAGAAAAAG-TAACACATGAA 1812 Query: 2320 GAATAAG 2326 GAA AAG Sbjct: 1813 GAAGAAG 1819 Score = 283 (42.5 bits), Expect = 0.011, P = 0.011 Identities = 125/186 (67%), Positives = 125/186 (67%), Strand = Plus / Plus Query: 2143 TGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCA-AAAAAGGGAGT 2201 TG AA ATAT G G A A AG AAAG AA C TGA G AG A AAAAAG A Sbjct: 1824 TGTAAC-ATAT-GAAGAAGAAGAAGAAAAAGTAACACATGAAGAAGAAGAAAAAGTAACA 1881 Query: 2202 TGTCAAGGCTGA-AAAAAGCAAGAAA--AAGAAGGAAGAGGAGG-AAGATGAGGAAGATG 2257 T AAG A AAAAAG AA A A AAGAAG AAGA A G AA AT A GAAGA G Sbjct: 1882 CATGAAGAAGAAGAAAAAGTAACACATGAAGAAG-AAGAAAATGTAACAT-ATGAAGAAG 1939 Query: 2258 AAGAGGATGAGG-AGGAGGAGGAAGATGAAGAAGATGAAG-A-TGAAGAAGAAGATGATG 2314 AAGA GA A G A A A GAAGA GAAGAAGA AAG A TGAAGAAGAAGA GAT Sbjct: 1940 AAGAAGAAAAAGTAACAC-ATGAAGAAGAAGAAGAAAAAGTAATGAAGAAGAAGAAGATA 1998 Query: 2315 ATGATGAATAA 2325 ATGA G ATAA Sbjct: 1999 ATGAAGTATAA 2009 Score = 280 (42.0 bits), Expect = 0.015, P = 0.015 Identities = 112/168 (66%), Positives = 112/168 (66%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAG A A G G A AT GAG A AGGAA A GA G AG A A AGG AG G Sbjct: 1609 GAAGAAGAA-GAAGAAGAT-GAGGAAGAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGG 1666 Query: 2204 TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 A G GAA AAA A GA AAGAAG AAGA GA GAA AT AGGAAGA GAAGA G Sbjct: 1667 AAGAAGAAGAAGAAA--ATGAGGAAGAAG-AAGAAGAAGAAAATAAGGAAGAAGAAGAAG 1723 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGA-AGATGAAGAAGAAGATGA 2312 A GA A GA GAG A GA GAAGAAG T A A ATGAAGAAGAAGA GA Sbjct: 1724 AAGAAAAAGAAGAGCATGAAGAAGAAG-TAACACATGAAGAAGAAGAAGA 1772 Score = 250 (37.5 bits), Expect = 0.35, P = 0.30 Identities = 104/159 (65%), Positives = 104/159 (65%), Strand = Plus / Plus Query: 2169 TAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAG-CAAGAAAA 2227 T AAG A A GA G AG AA A A G AG G AA G GAA AA CA GAA A Sbjct: 1314 TGAAGAAGAAAAAGAAGAAGTAACACATGAAGAAGAAAAAGAAGAAGTAACACATGAAGA 1373 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AA AG A A ATGA GAAGA GAA A G T A A A GA GAAGA GAA Sbjct: 1374 AGAAGAAAAAGTAACAC-ATGAAGAAGAAGAAAAAG-TAAC-AC-ATGAAGAAGAAGAAA 1429 Query: 2288 AAGATGA-AGATGAAGAAGAAGATGATGATGATGAATAAGT 2327 AAG T A A ATGAAGAAGAAGA GA GA GA GAA AAGT Sbjct: 1430 AAG-TAACATATGAAGAAGAAGAAGAAGAAGAAGAAAAAGT 1469 Score = 249 (37.4 bits), Expect = 0.39, P = 0.32 Identities = 123/187 (65%), Positives = 123/187 (65%), Strand = Plus / Plus Query: 2145 GAAGGATAT-TGCTGCATATCGA-GCTAAAGGA-AAGCC-TG-ATGCAGCAAAAAAGGGA 2199 GAAG A A T T CAT GA G AAAG A AAG T ATG AG A AAAA G A Sbjct: 1111 GAAGAAAAAGTAATACATGAAGAAGAAAAAGAAGAAGTAATACATGAAGAAGAAAAAGAA 1170 Query: 2200 GTTGTCAAGGC-TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGA 2258 G GT AA C TGAA AA G AA AA AAGAAG AA A A GAAGA GA AAGA GA Sbjct: 1171 GAAGT-AACACATGAAGAA-GAAA-AAGAAGAAGTAACAC-ATGAAGAAGAAAAAGAAGA 1226 Query: 2259 AG--AGG-ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 AG A ATGA GA GA A GAAGA G A A ATGAAGA GAA AAGAAGA G T A Sbjct: 1227 AGTAACACATGAAGAAGAAAAAGAAGAAGTAACACATGAAGAAGAAAAAGAAGAAG-TAA 1285 Query: 2316 TG-ATGAATAAG 2326 ATGAA AAG Sbjct: 1286 CACATGAAGAAG 1297 Score = 241 (36.2 bits), Expect = 0.91, P = 0.60 Identities = 105/157 (66%), Positives = 105/157 (66%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AAA G AA C T ATG AG A AA A G AG G AAG A AA CA GAA AAG Sbjct: 1428 AAAAGTAA-CAT-ATGAAGAAGAAGAAGAAGAAG--AAGAAAAAGTAACACATGAAGAAG 1483 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG-AGGAGGAGGAAGATGAAG- 2287 AAG AA AG A A ATGA GAAGA GAA A G T A A GA GA GAAGA AAG Sbjct: 1484 AAGAAAAAGTAACAC-ATGAAGAAGAAGAAAAAG-TAACACATGAAGAAGAAGAAAAAGT 1541 Query: 2288 -A-AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A A ATGAAGA GAAGAA AAGA GA GATGA GAA AAG Sbjct: 1542 AATACATGAAGAAGAAGAAAAAGAAGAAGATGAGGAAGAAG 1582 Score = 237 (35.6 bits), Expect = 1.4, P = 0.75 Identities = 105/159 (66%), Positives = 105/159 (66%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA--AG--CAAGAAA 2226 AGGAA A GA G AG AAA AAGG AG G A G GAAAAA AG CA GAA Sbjct: 1685 AGGAAGAAGAAGAAGAAGAAAATAAGGAAGAAGAAGAAGAAGAAAAAGAAGAGCATGAAG 1744 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG-AGGATGAGGAGGAGGAGGAAGATGA 2285 AAGAAG AA A A GAAGA GA GAAGA AAG A A A GA GA GA GAA A G Sbjct: 1745 AAGAAGTAACAC-ATGAAGAAGAAGAAGAAAAAGTAACAC-ATGAAGAAGAAGAAAAAGT 1802 Query: 2286 AGAAGATGAAGATGAAGAAGAAG-ATGATGATGATGAATAAG 2326 A A ATGAAGA GAAGAA A G A AT ATGA GAA AAG Sbjct: 1803 AACACATGAAGAAGAAGAAAATGTAACAT-ATGAAGAAGAAG 1843 Score = 231 (34.7 bits), Expect = 2.6, P = 0.93 Identities = 103/160 (64%), Positives = 103/160 (64%), Strand = Plus / Plus Query: 2171 AAGGAA-AGCCTGATGCAGCAAAA-AAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAA 2228 AAGGAA A GA G AG AAAA AAG G T AAG AA A A AAGAA AA Sbjct: 1708 AAGGAAGAAGAAGAAGAAGAAAAAGAAGAGCATGAAGAAGAAGTAACACATGAAGAAGAA 1767 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG--ATG-AGGAGGAGGAGGAAGATGA 2285 GAAG AA AG A A ATGA GAAGA GAA A G A A GA GA GA GAA ATG Sbjct: 1768 GAAGAAAAAGTAACAC-ATGAAGAAGAAGAAAAAGTAACACATGAAGAAGAAGAAAATGT 1826 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATG-ATGAATAAG 2326 A A ATGAAGA GAAGAAGAA A G T A ATGAA AAG Sbjct: 1827 AACATATGAAGAAGAAGAAGAAAAAG-TAACACATGAAGAAG 1867 Score = 230 (34.5 bits), Expect = 2.9, P = 0.95 Identities = 124/193 (64%), Positives = 124/193 (64%), Strand = Plus / Plus Query: 2145 GAAGGA-TAT-TGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCA-AAAAAGG-GAG 2200 GAAG A TA TG G A A AG AAG AA C TGA G A A AAAAAG GAG Sbjct: 970 GAAGTAATACATGAAGAAGAAAAAGAAGAAGTAACACATGAAGAAAAAGAAAAAGAAGAG 1029 Query: 2201 T-TGTC-AAGGCTGAAAA-AAGCAAGAAAAAGAAGGAAG-AGGAG--GAAGATGAGGAAG 2254 TG AAG A A AAG AAGAAAAAGAAG AAG A A GAAGA GA GAAG Sbjct: 1030 CATGAAGAAGTAATACATGAAG-AAGAAAAAGAAG-AAGTAACACATGAAGAAGAAGAAG 1087 Query: 2255 ATGAAG--AGG-ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATG 2311 A AAG A ATGA GA GA GA GAA A G A A ATGAAGA GAA AAGAAGA G Sbjct: 1088 AAAAAGTAACACATGAAGAAGAAGAAGAAAAAGTAATACATGAAGAAGAAAAAGAAGAAG 1147 Query: 2312 ATGATG-ATGAATAAG 2326 T AT ATGAA AAG Sbjct: 1148 -TAATACATGAAGAAG 1162 Score = 226 (33.9 bits), Expect = 4.5, P = 0.99 Identities = 98/144 (68%), Positives = 98/144 (68%), Strand = Plus / Plus Query: 2183 ATGCAGCAAAAAAGGGAGTTGTCAAGGC-TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAG 2241 ATG AG A AA A G A GT AA C TGAA AA G AA AA AAGAAG AA A A Sbjct: 1100 ATGAAGAAGAAGAAGAAAAAGT-AATACATGAAGAA-GAAA-AAGAAGAAGTAATAC-AT 1155 Query: 2242 GAAGATGAGGAAGATGAAG--AGG-ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGAT 2298 GAAGA GA AAGA GAAG A ATGA GA GA A GAAGA G A A ATGAAGA Sbjct: 1156 GAAGAAGAAAAAGAAGAAGTAACACATGAAGAAGAAAAAGAAGAAGTAACACATGAAGAA 1215 Query: 2299 GAAGAAGAAGATGATGATG-ATGAATAAG 2326 GAA AAGAAGA G T A ATGAA AAG Sbjct: 1216 GAAAAAGAAGAAG-TAACACATGAAGAAG 1243 Score = 219 (32.9 bits), Expect = 9.4, P = 1.0 Identities = 103/153 (67%), Positives = 103/153 (67%), Strand = Plus / Plus Query: 2182 GATGCAGCA-AAAAAGGGAGTTGTCAAG--GCTGAAAAA--AGCA-A-GAAAAAGAAGGA 2234 GA G AG A AAAAAG A T AAG G GAAAAA A CA A GAA AAGAAG A Sbjct: 1837 GAAGAAGAAGAAAAAGTAACACATGAAGAAGAAGAAAAAGTAACACATGAAGAAGAAGAA 1896 Query: 2235 AGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG-AGGAGGAGGAAGATGAAGAAGATG 2293 A AG A A ATGA GAAGA GAA A G T A A GA GA GAAGA GAA AAG T Sbjct: 1897 AAAGTAACAC-ATGAAGAAGAAGAAAATG-TAACATATGAAGAAGAAGAAGAAAAAG-TA 1953 Query: 2294 A-AGATGAAGAAGAAGATGATGATG-A-TGAATAAG 2326 A A ATGAAGAAGAAGA GA A G A TGAA AAG Sbjct: 1954 ACACATGAAGAAGAAGAAGAAAAAGTAATGAAGAAG 1989 >E10126 DNA encoding an immunogenicity protein of Leucocytozon caulleryi Length = 3399 Plus Strand HSPs: Score = 413 (62.0 bits), Expect = 1.3e-08, P = 1.3e-08 Identities = 121/161 (75%), Positives = 121/161 (75%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAG 2223 AG AAAG AA C TGA G AG A AAAA G AG G AGG GAA AA AAG AAG Sbjct: 2682 AGAAAAAGTAATACATGAAGAAGAAGAAAAAGAAGAAGATGAGGAAGAAGAAGAAG-AAG 2740 Query: 2224 AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 AA AAGAAG AAGAGGA GAAGA GA GAAGA GA GAGGA GAGGA GA GA GAAGA Sbjct: 2741 AAGAAGAAG-AAGAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGGAAGAAGAAGAAGAA 2799 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA GA GAAGA GAAGAAGAAGA GA ATGA GAA AAG Sbjct: 2800 GAAGATGAGGAAGAGGAAGAAGAAGAAGAAAATGAGGAAGAAG 2842 Score = 395 (59.3 bits), Expect = 8.9e-08, P = 8.9e-08 Identities = 119/161 (73%), Positives = 119/161 (73%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTG-TCAAGGCTGA-AAAAAGCAAG 2223 AG AAAG AA C TGA G AG A AAAA G A T T AAG A AAAAAG AAG Sbjct: 2658 AGAAAAAGTAACACATGAAGAAGAAGAAAAAGTAATACATGAAGAAGAAGAAAAAG-AAG 2716 Query: 2224 AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 AA A GA GGAAGA GA GAAGA GA GAAGA GAAGAGGA GA GA GA GA GAAGAT Sbjct: 2717 AAGATGA-GGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAT 2775 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GAAGA GAAGA GAAGAAGAAGA GATGA GA GA AAG Sbjct: 2776 GAGGAAGAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGGAAG 2818 Score = 374 (56.1 bits), Expect = 8.1e-07, P = 8.1e-07 Identities = 128/181 (70%), Positives = 128/181 (70%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGT 2204 AAG A AT TG A A AG AAAG A AAG TGA G AG A AA A G AG G Sbjct: 2687 AAGTA-ATACATGAAGAAGAAGAAAAAGAAGAAGA-TGAGGAAGAAGAAGAAGAAGAAGA 2744 Query: 2205 CAAGGCTGAA-AA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 A G GA AA AAG AAGAA AAGAAG A GAGGA GA GA GA GAAGA GAAGA Sbjct: 2745 AGAAGAAGAGGAAGAAG-AAGAAGAAGAAG-ATGAGGAAGAGGAAGAAGAAGAAGAAGAA 2802 Query: 2263 GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 GATGAGGA GAGGA GAAGA GAAGAA ATGA GA GAAGAAGAAGA GA AT A GAA Sbjct: 2803 GATGAGGAAGAGGAAGAAGAAGAAGAAAATGAGGAAGAAGAAGAAGAAGAAAATAAGGAA 2862 Query: 2323 TAAG 2326 AAG Sbjct: 2863 GAAG 2866 Score = 361 (54.2 bits), Expect = 3.2e-06, P = 3.2e-06 Identities = 127/182 (69%), Positives = 127/182 (69%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTA-AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTT 2202 GAAG A A G G A AT GAG A AAG A AAG GA G AG A AA AGG AG Sbjct: 2704 GAAGAAAAA-GAAGAAGAT-GAGGAAGAAGAAGAAGAA-GAAGAAGAAGAAGAGGAAGAA 2760 Query: 2203 GTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA 2261 G A G GAA A AG AAGA AAGAAG AAGA GA GAAGATGAGGAAGA GAAGA Sbjct: 2761 GAAGAAGAAGAAGATGAGGAAGAGGAAGAAG-AAGAAGAAGAAGATGAGGAAGAGGAAGA 2819 Query: 2262 GGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GA GA GA A GAGGAAGA GAAGAAGA GAA AT A GAAGAAGA GA GA GA A Sbjct: 2820 AGAAGAAGAAAATGAGGAAGAAGAAGAAGAAGAAAATAAGGAAGAAGAAGAAGAAGAAAA 2879 Query: 2322 ATAAG 2326 A AAG Sbjct: 2880 AGAAG 2884 Score = 348 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05 Identities = 114/161 (70%), Positives = 114/161 (70%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCA-AAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGA 2224 AG AAAG AA C TGA G AG A AAAAAG A T AAG GAA AAA AAG Sbjct: 2634 AGAAAAAGTAACACATGAAGAAGAAGAAAAAGTAACACATGAAGAA-GAAGAAA--AAGT 2690 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 AA A A G AAGA GA GAA A GA GAAGATGA GA GA GA GA GA GA GAAGA G Sbjct: 2691 AATACATG-AAGAAGAAGAAAAAGAAGAAGATGAGGAAGAAGAAGAAGAAGAAGAAGAAG 2749 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GA GAAGA GAAGAAGAAGATGA GA GA GAA AAG Sbjct: 2750 AAGAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGGAAGAAG 2791 Score = 329 (49.4 bits), Expect = 9.4e-05, P = 9.4e-05 Identities = 113/156 (72%), Positives = 113/156 (72%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AAG A AAG GA G AG A AA A G AG G AGG GA AA G AAGAA AAG Sbjct: 2741 AAGAAGAAGAA-GAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGGAA-G-AAGAAGAAG 2797 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA- 2288 AAG AAGA GAGGAAGA GA GAAGA GAAGA ATGAGGA GA GA GAAGA GAA A Sbjct: 2798 AAG-AAGATGAGGAAGAGGAAGAAGAAGAAGAAAATGAGGAAGAAGAAGAAGAAGAAAAT 2856 Query: 2289 -AG-ATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AG A GAAGA GAAGAAGAA A GA GA ATGAA AAG Sbjct: 2857 AAGGAAGAAGAAGAAGAAGAAAAAGAAGAGCATGAAGAAG 2896 Score = 326 (48.9 bits), Expect = 0.00013, P = 0.00013 Identities = 116/167 (69%), Positives = 116/167 (69%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCA-AAAAAGGGAGTTGTCAAGGCTGA-AAAAAGCAAG 2223 AG AAAG AA C TGA G AG A AAAAAG A T AAG A AAAAAG AA Sbjct: 2610 AGAAAAAGTAACACATGAAGAAGAAGAAAAAGTAACACATGAAGAAGAAGAAAAAGTAAC 2669 Query: 2224 AAAAAGAAGGAAGAGGAGGAAG-A-TG-AGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 A A GAAG AAGA GA AAG A T A GAAGA GAAGA A GA GA GA GAGGAA Sbjct: 2670 ACAT-GAAG-AAGAAGAAAAAGTAATACATGAAGAAGAAGAAAAAGAAGAAGATGAGGAA 2727 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 GA GAAGAAGA GAAGA GAAGAAGA GA GA GA GA GAA AAG TG Sbjct: 2728 GAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGATG 2776 Score = 300 (45.0 bits), Expect = 0.0020, P = 0.0020 Identities = 110/156 (70%), Positives = 110/156 (70%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAG A AAG TGA G AG AA A G AG G A G TGA AA AG AAGAA AA Sbjct: 2765 AAGAAGAAGA-TGAGGAAGAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGGAAGAAGAA 2823 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG AA A GAGGAAGA GA GAAGA GAA A AT AGGA GA GA GAAGA GAA A Sbjct: 2824 GAAGAAA-ATGAGGAAGAAGAAGAAGAAGAA-A--ATAAGGAAGAAGAAGAAGAAGAAAA 2879 Query: 2289 AGATGAAGATGAAGAAGAAGATGATG-ATGATGAATAAG 2326 AGA GA ATGAAGAAGAAG T A ATGA GAA AAG Sbjct: 2880 AGAAGAGCATGAAGAAGAAG-TAACACATGAAGAAGAAG 2917 Score = 284 (42.6 bits), Expect = 0.011, P = 0.011 Identities = 122/182 (67%), Positives = 122/182 (67%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGT 2204 GAAG A A G G A AT GAG A AGGAA G GA G AG AAA AGG AG G Sbjct: 2788 GAAGAAGAA-GAAGAAGAT-GAGGAAGAGGAA-GAA-GAAGAAGAAAATGAGGAAGAAGA 2843 Query: 2205 CAAGGCTGAAAA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG--A 2261 A G GAAAA AAG AAGAA AAGAAG AAGA A GAAGA A GAAGA GAAG A Sbjct: 2844 AGAAGAAGAAAATAAGGAAGAAGAAGAAG-AAGAAAAAGAAGAGCATGAAGAAGAAGTAA 2902 Query: 2262 GG-ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG-ATGAT 2319 ATGA GA GA GA GAA A G A A ATGAAGA GAAGAA AAG T A ATGA Sbjct: 2903 CACATGAAGAAGAAGAAGAAAAAGTAACACATGAAGAAGAAGAAAAAG-TAACACATGAA 2961 Query: 2320 GAATAAG 2326 GAA AAG Sbjct: 2962 GAAGAAG 2968 Score = 283 (42.5 bits), Expect = 0.012, P = 0.012 Identities = 125/186 (67%), Positives = 125/186 (67%), Strand = Plus / Plus Query: 2143 TGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCA-AAAAAGGGAGT 2201 TG AA ATAT G G A A AG AAAG AA C TGA G AG A AAAAAG A Sbjct: 2973 TGTAAC-ATAT-GAAGAAGAAGAAGAAAAAGTAACACATGAAGAAGAAGAAAAAGTAACA 3030 Query: 2202 TGTCAAGGCTGA-AAAAAGCAAGAAA--AAGAAGGAAGAGGAGG-AAGATGAGGAAGATG 2257 T AAG A AAAAAG AA A A AAGAAG AAGA A G AA AT A GAAGA G Sbjct: 3031 CATGAAGAAGAAGAAAAAGTAACACATGAAGAAG-AAGAAAATGTAACAT-ATGAAGAAG 3088 Query: 2258 AAGAGGATGAGG-AGGAGGAGGAAGATGAAGAAGATGAAG-A-TGAAGAAGAAGATGATG 2314 AAGA GA A G A A A GAAGA GAAGAAGA AAG A TGAAGAAGAAGA GAT Sbjct: 3089 AAGAAGAAAAAGTAACAC-ATGAAGAAGAAGAAGAAAAAGTAATGAAGAAGAAGAAGATA 3147 Query: 2315 ATGATGAATAA 2325 ATGA G ATAA Sbjct: 3148 ATGAAGTATAA 3158 Score = 280 (42.0 bits), Expect = 0.016, P = 0.016 Identities = 112/168 (66%), Positives = 112/168 (66%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAG A A G G A AT GAG A AGGAA A GA G AG A A AGG AG G Sbjct: 2758 GAAGAAGAA-GAAGAAGAT-GAGGAAGAGGAAGAAGAAGAAGAAGAAGATGAGGAAGAGG 2815 Query: 2204 TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 A G GAA AAA A GA AAGAAG AAGA GA GAA AT AGGAAGA GAAGA G Sbjct: 2816 AAGAAGAAGAAGAAA--ATGAGGAAGAAG-AAGAAGAAGAAAATAAGGAAGAAGAAGAAG 2872 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGA-AGATGAAGAAGAAGATGA 2312 A GA A GA GAG A GA GAAGAAG T A A ATGAAGAAGAAGA GA Sbjct: 2873 AAGAAAAAGAAGAGCATGAAGAAGAAG-TAACACATGAAGAAGAAGAAGA 2921 Score = 250 (37.5 bits), Expect = 0.39, P = 0.32 Identities = 104/159 (65%), Positives = 104/159 (65%), Strand = Plus / Plus Query: 2169 TAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAG-CAAGAAAA 2227 T AAG A A GA G AG AA A A G AG G AA G GAA AA CA GAA A Sbjct: 2463 TGAAGAAGAAAAAGAAGAAGTAACACATGAAGAAGAAAAAGAAGAAGTAACACATGAAGA 2522 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AA AG A A ATGA GAAGA GAA A G T A A A GA GAAGA GAA Sbjct: 2523 AGAAGAAAAAGTAACAC-ATGAAGAAGAAGAAAAAG-TAAC-AC-ATGAAGAAGAAGAAA 2578 Query: 2288 AAGATGA-AGATGAAGAAGAAGATGATGATGATGAATAAGT 2327 AAG T A A ATGAAGAAGAAGA GA GA GA GAA AAGT Sbjct: 2579 AAG-TAACATATGAAGAAGAAGAAGAAGAAGAAGAAAAAGT 2618 Score = 249 (37.4 bits), Expect = 0.43, P = 0.35 Identities = 123/187 (65%), Positives = 123/187 (65%), Strand = Plus / Plus Query: 2145 GAAGGATAT-TGCTGCATATCGA-GCTAAAGGA-AAGCC-TG-ATGCAGCAAAAAAGGGA 2199 GAAG A A T T CAT GA G AAAG A AAG T ATG AG A AAAA G A Sbjct: 2260 GAAGAAAAAGTAATACATGAAGAAGAAAAAGAAGAAGTAATACATGAAGAAGAAAAAGAA 2319 Query: 2200 GTTGTCAAGGC-TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGA 2258 G GT AA C TGAA AA G AA AA AAGAAG AA A A GAAGA GA AAGA GA Sbjct: 2320 GAAGT-AACACATGAAGAA-GAAA-AAGAAGAAGTAACAC-ATGAAGAAGAAAAAGAAGA 2375 Query: 2259 AG--AGG-ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 AG A ATGA GA GA A GAAGA G A A ATGAAGA GAA AAGAAGA G T A Sbjct: 2376 AGTAACACATGAAGAAGAAAAAGAAGAAGTAACACATGAAGAAGAAAAAGAAGAAG-TAA 2434 Query: 2316 TG-ATGAATAAG 2326 ATGAA AAG Sbjct: 2435 CACATGAAGAAG 2446 Score = 241 (36.2 bits), Expect = 1.0, P = 0.63 Identities = 105/157 (66%), Positives = 105/157 (66%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AAA G AA C T ATG AG A AA A G AG G AAG A AA CA GAA AAG Sbjct: 2577 AAAAGTAA-CAT-ATGAAGAAGAAGAAGAAGAAG--AAGAAAAAGTAACACATGAAGAAG 2632 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG-AGGAGGAGGAAGATGAAG- 2287 AAG AA AG A A ATGA GAAGA GAA A G T A A GA GA GAAGA AAG Sbjct: 2633 AAGAAAAAGTAACAC-ATGAAGAAGAAGAAAAAG-TAACACATGAAGAAGAAGAAAAAGT 2690 Query: 2288 -A-AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A A ATGAAGA GAAGAA AAGA GA GATGA GAA AAG Sbjct: 2691 AATACATGAAGAAGAAGAAAAAGAAGAAGATGAGGAAGAAG 2731 Score = 237 (35.6 bits), Expect = 1.5, P = 0.78 Identities = 105/159 (66%), Positives = 105/159 (66%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA--AG--CAAGAAA 2226 AGGAA A GA G AG AAA AAGG AG G A G GAAAAA AG CA GAA Sbjct: 2834 AGGAAGAAGAAGAAGAAGAAAATAAGGAAGAAGAAGAAGAAGAAAAAGAAGAGCATGAAG 2893 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG-AGGATGAGGAGGAGGAGGAAGATGA 2285 AAGAAG AA A A GAAGA GA GAAGA AAG A A A GA GA GA GAA A G Sbjct: 2894 AAGAAGTAACAC-ATGAAGAAGAAGAAGAAAAAGTAACAC-ATGAAGAAGAAGAAAAAGT 2951 Query: 2286 AGAAGATGAAGATGAAGAAGAAG-ATGATGATGATGAATAAG 2326 A A ATGAAGA GAAGAA A G A AT ATGA GAA AAG Sbjct: 2952 AACACATGAAGAAGAAGAAAATGTAACAT-ATGAAGAAGAAG 2992 Score = 231 (34.7 bits), Expect = 2.9, P = 0.94 Identities = 103/160 (64%), Positives = 103/160 (64%), Strand = Plus / Plus Query: 2171 AAGGAA-AGCCTGATGCAGCAAAA-AAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAA 2228 AAGGAA A GA G AG AAAA AAG G T AAG AA A A AAGAA AA Sbjct: 2857 AAGGAAGAAGAAGAAGAAGAAAAAGAAGAGCATGAAGAAGAAGTAACACATGAAGAAGAA 2916 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG--ATG-AGGAGGAGGAGGAAGATGA 2285 GAAG AA AG A A ATGA GAAGA GAA A G A A GA GA GA GAA ATG Sbjct: 2917 GAAGAAAAAGTAACAC-ATGAAGAAGAAGAAAAAGTAACACATGAAGAAGAAGAAAATGT 2975 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATG-ATGAATAAG 2326 A A ATGAAGA GAAGAAGAA A G T A ATGAA AAG Sbjct: 2976 AACATATGAAGAAGAAGAAGAAAAAG-TAACACATGAAGAAG 3016 Score = 230 (34.5 bits), Expect = 3.2, P = 0.96 Identities = 124/193 (64%), Positives = 124/193 (64%), Strand = Plus / Plus Query: 2145 GAAGGA-TAT-TGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCA-AAAAAGG-GAG 2200 GAAG A TA TG G A A AG AAG AA C TGA G A A AAAAAG GAG Sbjct: 2119 GAAGTAATACATGAAGAAGAAAAAGAAGAAGTAACACATGAAGAAAAAGAAAAAGAAGAG 2178 Query: 2201 T-TGTC-AAGGCTGAAAA-AAGCAAGAAAAAGAAGGAAG-AGGAG--GAAGATGAGGAAG 2254 TG AAG A A AAG AAGAAAAAGAAG AAG A A GAAGA GA GAAG Sbjct: 2179 CATGAAGAAGTAATACATGAAG-AAGAAAAAGAAG-AAGTAACACATGAAGAAGAAGAAG 2236 Query: 2255 ATGAAG--AGG-ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATG 2311 A AAG A ATGA GA GA GA GAA A G A A ATGAAGA GAA AAGAAGA G Sbjct: 2237 AAAAAGTAACACATGAAGAAGAAGAAGAAAAAGTAATACATGAAGAAGAAAAAGAAGAAG 2296 Query: 2312 ATGATG-ATGAATAAG 2326 T AT ATGAA AAG Sbjct: 2297 -TAATACATGAAGAAG 2311 Score = 226 (33.9 bits), Expect = 4.9, P = 0.99 Identities = 98/144 (68%), Positives = 98/144 (68%), Strand = Plus / Plus Query: 2183 ATGCAGCAAAAAAGGGAGTTGTCAAGGC-TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAG 2241 ATG AG A AA A G A GT AA C TGAA AA G AA AA AAGAAG AA A A Sbjct: 2249 ATGAAGAAGAAGAAGAAAAAGT-AATACATGAAGAA-GAAA-AAGAAGAAGTAATAC-AT 2304 Query: 2242 GAAGATGAGGAAGATGAAG--AGG-ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGAT 2298 GAAGA GA AAGA GAAG A ATGA GA GA A GAAGA G A A ATGAAGA Sbjct: 2305 GAAGAAGAAAAAGAAGAAGTAACACATGAAGAAGAAAAAGAAGAAGTAACACATGAAGAA 2364 Query: 2299 GAAGAAGAAGATGATGATG-ATGAATAAG 2326 GAA AAGAAGA G T A ATGAA AAG Sbjct: 2365 GAAAAAGAAGAAG-TAACACATGAAGAAG 2392 >U01345 Rattus norvegicus clone A-3 arylamine N-acetyltransferase mRNA, Length = 478 Minus Strand HSPs: Score = 351 (52.7 bits), Expect = 2.4e-08, P = 2.4e-08 Identities = 111/150 (74%), Positives = 111/150 (74%), Strand = Minus / Plus Query: 150 CTTCCACCTCTCTGAGCACTTCTTAGAAAACTCTGAGAAGTTGACTGAAGCATCTGGGTG 91 CTTCCA CTCTC GA CA TTCTT A AACTC G GAAGTTGAC GA G TC GG TG Sbjct: 106 CTTCCATCTCTCGGAACATTTCTTCAAGAACTCGGCGAAGTTGACCGACGAGTCGGGATG 165 Query: 90 CTTCTTCTTATGCTCCTCCCGACAAGTTTGCACAAAAAATGCATATGATGACATTTTGCC 31 CTTCTTCTT TGCTCCTCC G GCAC AA AA GC TA GA GACAT TTGCC Sbjct: 166 CTTCTTCTTGTGCTCCTCCTG--------GCACGAAGAAGGCGTACGAGGACATCTTGCC 217 Query: 30 TCTCGGCTTCTTAGGATCTCCTTTGCCCAT 1 C CGGCTT TT GG TC CC TTGCCCAT Sbjct: 218 CCGCGGCTTGTTGGGGTCCCCCTTGCCCAT 247 >U01145 Rattus norvegicus clone 923 polymeric immunoglobulin receptor mRNA Length = 511 Plus Strand HSPs: Score = 348 (52.2 bits), Expect = 3.0e-08, P = 3.0e-08 Identities = 114/161 (70%), Positives = 114/161 (70%), Strand = Plus / Plus Query: 2166 AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGA 2224 AGC AGGA AAG GA CAG AA A GGAG G CA GG GA A A AAG Sbjct: 241 AGCAGGAGGAGAAGGAGGAA-CAGGAACAGGAGGAGGAG-CAGGGG-GAGGAGAAAAAGG 297 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AG AGGA GAGGAGGAAGA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA G Sbjct: 298 AGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 357 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GA GA GA GA GA GAAGAAGA GA GA GA GAA AAG Sbjct: 358 AGGAGGAGGAGGAGGA-GAAGAAGAAGAAGAAGAAGAAGAAG 398 Score = 343 (51.5 bits), Expect = 5.1e-08, P = 5.1e-08 Identities = 115/161 (71%), Positives = 115/161 (71%), Strand = Plus / Plus Query: 2166 AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGA 2224 AGC AGGA AAG GA CAG AA A GGAG G CA GG GA A A AAG Sbjct: 241 AGCAGGAGGAGAAGGAGGAA-CAGGAACAGGAGGAGGAG-CAGGGG-GAGGAGAAAAAGG 297 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AG AGGA GAGGAGGAAGA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA G Sbjct: 298 AGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 357 Query: 2285 AAGAAGATGAAGATGA-A-GAAGAAGATGATGATGATGAATAAG 2326 A GA GA GA GA GA A GAAGAAGA GA GA GA GAA AAG Sbjct: 358 AGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 401 Score = 312 (46.8 bits), Expect = 1.3e-06, P = 1.3e-06 Identities = 82/105 (78%), Positives = 82/105 (78%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AG A AG AGGA GAGGAG AAGA GA GAAGA GAAGA GA GA GA GA GA GAAG Sbjct: 355 AGGAGGAGGAGGAGGAGGAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 413 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 414 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 458 Score = 299 (44.9 bits), Expect = 5.1e-06, P = 5.1e-06 Identities = 107/154 (69%), Positives = 107/154 (69%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAG 2229 AGGAA AG GA G AG A A GGAG G A GG GA A AG A GA A G Sbjct: 313 AGGAAGAGGAGGAGG-AGGAGGAGGAGGAGGAGG-A-GGAGGAGGAGGAGGAGGAGGAGG 369 Query: 2230 AAG-GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 A G GAAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGA Sbjct: 370 AGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 429 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 AGA GAAGA GAAGAAGAAGA GA GA GA AA AA Sbjct: 430 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAA 466 Score = 292 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05 Identities = 106/157 (67%), Positives = 106/157 (67%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAA-AGCAAGAAAAA 2228 AGGAA AG GA G AG A A GGAG G AGG GA A AG A GA A Sbjct: 313 AGGAAGAGGAGGAGG-AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG 371 Query: 2229 GA-AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 GA A GAAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 372 GAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 431 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 AAGA GAAGA GAAGAAGAAGA GA GA A AA AA Sbjct: 432 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAA 469 Score = 289 (43.4 bits), Expect = 0.00015, P = 0.00015 Identities = 79/104 (75%), Positives = 79/104 (75%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AG A AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAG Sbjct: 370 AGGAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 428 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 A GAAGAAGA GAAGA GAAGAAGAAGA GA A A AA AA Sbjct: 429 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAAAAA 472 >U00762 Rattus norvegicus clone1 polymeric immunoglobulin receptor mRNA 3' Length = 319 Plus Strand HSPs: Score = 348 (52.2 bits), Expect = 4.8e-08, P = 4.8e-08 Identities = 114/161 (70%), Positives = 114/161 (70%), Strand = Plus / Plus Query: 2166 AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGA 2224 AGC AGGA AAG GA CAG AA A GGAG G CA GG GA A A AAG Sbjct: 77 AGCAGGAGGAGAAGGAGGAA-CAGGAACAGGAGGAGGAG-CAGGGG-GAGGAGAAAAAGG 133 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AG AGGA GAGGAGGAAGA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA G Sbjct: 134 AGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 193 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GA GA GA GA GAAGA GAAGA GA GA GA GAA AAG Sbjct: 194 AGGAGGAGGAGGAGGAAGA-GAAGAAGAAGAAGAAGAAGAAG 234 Score = 337 (50.6 bits), Expect = 1.5e-07, P = 1.5e-07 Identities = 115/162 (70%), Positives = 115/162 (70%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAA 2222 GAG AAAGGA AG GA G AG A AA GGAG G AGG GA A AG A Sbjct: 124 GAGAAAAAGGAGGAGGAGGAGG-AGGAGGAAGAGGAGGAGG--AGGAGGAGGAGGAGGAG 180 Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GA A GA GGA GAGGAGGA GA GAGGAAGA GAAGA GA GA GA GA GA GAAGA Sbjct: 181 GAGGAGGA-GGAGGAGGAGGAGGAGGAGGAAGA-GAAGAAGAAGAAGAAGAAGAAGAAGA 238 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 239 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 282 Score = 191 (28.7 bits), Expect = 0.68, P = 0.49 Identities = 99/156 (63%), Positives = 99/156 (63%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGT-T--GTCAAGGCTGAAAAAAGCAA 2222 AG T AA G AA CCT TG GC A AG GAGT T G C AG CTG AA A AA Sbjct: 5 AGTTTAAAGTAATCCT--TG--GCTACCTAGTGAGTGTAAGGCCAGCCTGGAATCAATAA 60 Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GA G AA AG AG A GA GAG A GA GAA AGGA AGGAGGAGGAG A G Sbjct: 61 GAGTTGGTTTCAA-AGAAGCAGGAGGAGAAGGAGGAACAGGAACAGGAGGAGGAGCAGGG 119 Query: 2283 TGAAGAAGATGAAG-ATGAAGAAGAAGATGATGATGATGA 2321 GA GA GA AAG A GA GA GA GA GA GA GA GA Sbjct: 120 GGAGGA-GAAAAAGGAGGAGGAGGAGGAGGAGGAAGAGGA 158 >M64239 Mouse T-cell receptor alpha/delta chain locus. Length = 94,647 Minus Strand HSPs: Score = 400 (60.0 bits), Expect = 6.5e-08, P = 6.5e-08 Identities = 158/232 (68%), Positives = 158/232 (68%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TC TCCTCCTCCTCCT Sbjct: 52222 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TCCTCCTCCTCCTCCT 52280 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCC 2208 C TCCTC TC TC TCCTC TCTTCCTCCTC TCCT CTTTT CT CT TT TTC CC Sbjct: 52281 CCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTTTTCCTC-CTCTTCTTCCTCC 52339 Query: 2207 TTGACAACTCCCTTTTT-TGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGC-AATA 2151 T C C CCT TT T CT C TC CT TCCT CTC T C C AA A Sbjct: 52340 TCCTCCTCCTCCTCTTCCTCCT-CTTCTTCCTCCTCCTCCTTCTCTTCCTCCTCCCAAGA 52398 Query: 2150 TCCT-TCCAAAG-CAA-AGGGAGGATAAAACAGTAGGGAAGA-AAA-AAAGATTAA 2100 TCCA AG CA A GAG AT A G GGGA G AAA AAAG TTAA Sbjct: 52399 GAGACTCCAGAGTCATTAATGAG-ATTACTGGGAGGGGAGGGGAAACAAAGGTTAA 52453 Score = 319 (47.9 bits), Expect = 0.00032, P = 0.00032 Identities = 89/116 (76%), Positives = 89/116 (76%), Strand = Minus / Plus Query: 2337 GCTAGAACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTC 2278 GCTAGA C CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC Sbjct: 52171 GCTAGATCT--CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 52228 Query: 2277 CTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCT 2222 TC TC TC TC TC TCTTC TCTTC TC TCTTC TCCTC TCCT CT T CT Sbjct: 52229 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TCCTCCTCCTCCTCCTCCT 52283 Score = 301 (45.2 bits), Expect = 0.0021, P = 0.0021 Identities = 105/150 (70%), Positives = 105/150 (70%), Strand = Minus / Plus Query: 2319 ATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTC 2260 ATC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC TC TC TC Sbjct: 52176 ATC-TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 52234 Query: 2259 TTCATCTTCCTCATCTTCCTCCTCTTCCT-TCTTTTTCTTGCTTTTT-TCAGCCTTGACA 2202 TTC TCTTC TC TCTTC TC TCTTC T TC T TC T CT T TC CCT C Sbjct: 52235 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC 52294 Query: 2201 ACTCCCTTTTT-TGCTGCATCAGGCTTT-CCT 2172 C CCT TT T CT C TC CTTT CCT Sbjct: 52295 TCCTCCTCTTCCTCCTCC-TCCTCCTTTTCCT 52325 Score = 298 (44.7 bits), Expect = 0.0029, P = 0.0029 Identities = 80/104 (76%), Positives = 80/104 (76%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC TC TC TC TC TC TC TC TC TC TCTTC TC TCCTCCTCCT TC TCC Sbjct: 52268 TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTTTTCCTCC 52327 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCT 2218 TCTTC TC TCCTC TC TCCTCCTCTTCCT CT TT CTT CT Sbjct: 52328 TCTTCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCTT-CTTCCT 52370 Score = 294 (44.1 bits), Expect = 0.0044, P = 0.0044 Identities = 90/122 (73%), Positives = 90/122 (73%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TC TC TC TC TC TC TC TC TC TC TCCTC TCCTCCT Sbjct: 52252 CTTCTTCTTCTTC-TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCT 52310 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTT-T-TTCTTGCTTTT-TTCAG 2210 C TCCTC T TC TCCTC TCTTCCTCCTC TCCT CT T TTC T CT TT TTC Sbjct: 52311 CCTCCTCCTTTTCCTCCTCTTCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCTTCCT 52370 Query: 2209 CCT 2207 CCT Sbjct: 52371 CCT 52373 Score = 290 (43.5 bits), Expect = 0.0067, P = 0.0067 Identities = 74/94 (78%), Positives = 74/94 (78%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 || || || || || || || | || || |||||||| || |||||||||||||| ||| Sbjct: 52298 TCCTCTTCCTCCTCCTCCTCCTTTTCCTCCTCTTCTTCCTCCTCCTCCTCCTCCTCTTCC 52357 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCT 2228 || || |||||||| || |||| |||||||| || Sbjct: 52358 TCCTCTTCTTCCTCCTCCTCCTTCTCTTCCTCCT 52391 Score = 248 (37.2 bits), Expect = 0.55, P = 0.42 Identities = 68/91 (74%), Positives = 68/91 (74%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 ||| || || || || | ||| || || ||||| || || || || ||||| ||||||| Sbjct: 52302 CTTCCTCCTCCTCCTCCTTTTCCTCCTCTTCTTCCTCCTCCTCCTCCTCCTCTTCCTCCT 52361 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTC 2236 | || || || || |||| ||||||||||| Sbjct: 52362 CTTCTTCCTCCTCCTCCTTCTCTTCCTCCTC 52392 >AC004015 Human BAC clone RG333F24 from 7q11.2-q21, complete sequence. Length = 144,239 Minus Strand HSPs: Score = 400 (60.0 bits), Expect = 6.5e-08, P = 6.5e-08 Identities = 124/161 (77%), Positives = 124/161 (77%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTCCTCCTC TCCT Sbjct: 113146 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCTTCCT 113205 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT--TTCAGC 2209 C TC TC TC TCTTCCTC TCTTCCTC TCTTC TTCTT TTCTT CTT T TTC C Sbjct: 113206 CTTCTTCCTCTTCTTCCTCTTCTTCCTCTTCTTC-TTCTTCTTCTT-CTTCTCCTTCT-C 113262 Query: 2208 CTTGACAA-CTCCCT-TT-TT-TGCTGCATCAGGCT-TTCCTTT 2170 CTT C CTCC T TT TT T CT C CAG T TTCCT T Sbjct: 113263 CTTCTCCTTCTCCTTCTTCTTCTTCTTCGACAGAGTCTTCCTCT 113306 Score = 382 (57.3 bits), Expect = 4.3e-07, P = 4.3e-07 Identities = 142/204 (69%), Positives = 142/204 (69%), Strand = Minus / Plus Query: 2364 CTTTATAGACAAGAAAAAAAAAACTGC-GCTAGAACCAACTTATTCATCATCATCATCTT 2306 CT AT A AG A AAA AA TGC GCT G C CTT TTC TC TC TC TCTT Sbjct: 113091 CTCAATGAAGTAGGCACAAATAA-TGCTGCT-GCTGCTTCTTCTTCTTCTTCTTCTTCTT 113148 Query: 2305 CTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCAT 2246 CTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC TC TC TC TC TCTTCCTC T Sbjct: 113149 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCTTCCTCTT 113208 Query: 2245 CTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCAGCCTTGACAACTCCCTTTTTTGC 2188 CTTCCTC TCTTCCT CTT TTC T CTT TT TTC C T C CTCC T T T C Sbjct: 113209 CTTCCTCTTCTTCCT-CTTCTTCCT-CTTCTTCTTCTTCTTCTTCTTCTCCTTCTCCTTC 113266 Query: 2187 TGCATCAGGCTT-TCCTTTAGCT-CGATA 2161 T C TC CTT T CTT CT CGA A Sbjct: 113267 TCCTTCTC-CTTCTTCTTCTTCTTCGACA 113294 Score = 283 (42.5 bits), Expect = 0.014, P = 0.014 Identities = 405/707 (57%), Positives = 405/707 (57%), Strand = Minus / Plus Query: 2092 AATAGAACATGGCAGAACTTTATGAAAGAAATCAAGATTCTAGTTATACCAAAATATCAC 2033 AA AG ACA G CAGA T T T G A TCAA TT A TT TA AAA ATC C Sbjct: 69340 AAAAGTACAGGTCAGAG-TATGTCTTTGCACTCAATTTTG-ATTTTTATATAAA-ATC-C 69395 Query: 2032 GTATCTGTAGAT-CCACAGCAAC-TCCAGAAATAACTAGAACTTCAATAAATGAACA-TA 1976 TA TGT T CCACAGC TC AA AA TAG TT AA AAA GAA A T Sbjct: 69396 -TAGATGTTTCTACCACAGCTGGATCTCTAAGGAAGTAG---TT-AAGAAAAGAAAAATG 69450 Query: 1975 AAAATACAAGATCAT-TATAACAATCTATAA-CTCAT-GAAATGGCATAGTCTAATATTT 1919 AA CA GAT A TATA T T TA C CAT G AA G CATAGT T AT TT Sbjct: 69451 TAAGCGCA-GATAACATATAGTTCTTTTTAGTCCCATAGGAA-GCCATAGTGTCATGTTA 69508 Query: 1918 GCAAAGTTATGCCTCATTGAGGTGCA-ATTATCTACCAGATCCTAACTCTATTAAA-ACC 1861 AA T A T TTGAGGT CA A AT AC A AT A CT T TTAAA A Sbjct: 69509 CTGAA-TAAAATATT-TTGAGGTTCACACAATTCAC-ATATAA-ATCTGTCTTAAATATA 69564 Query: 1860 AG-AATGTAGAGACTTTGATTAAAGGGTAGACACTGCCACC-TTCTGAATGCAAAAAAGC 1803 A AAT TA A T T TT AA TA ACA TG C TT G TGC A AAG Sbjct: 69565 ATTAATATATTTAATATTTTTCAAAA-TAAACA-TGACGGTATTAGGTTTGCCATTAAGT 69622 Query: 1802 ACT--CTA--CAGGT-TTACACTGTCAG-ACCTTAATCCTTAGT-AGGAAATGTGGTCTT 1750 A T C A CAG TTAC T CA A C TAAT CTT T A GA A T TC Sbjct: 69623 AATGGCAAAACAGCAATTACTTTTGCACCAACCTAATACTTTCTGATGATAAAT--TCAG 69680 Query: 1749 AAAA-AAAAAAGGTAATTTGTCAATAAACATGCAATTAGGTTAAGAAAC-ATCTAGAAAT 1692 A AA AAAAAAGGTAA T A T AA AT CA TT G T G AA AT TA AA T Sbjct: 69681 ACAATAAAAAAGGTAAAAGATTATTTAAAATCCATTT-GTATCTGTAAGTATGTATAATT 69739 Query: 1691 AAACACTTTTCAGA-ATGA-CTAAAGC-TGAAAAT-TAAG-TATTTAAT-A-TTTCAATT 1639 A A TTTTCA A A A CT AG T T TA T TTT AT A TTT A TT Sbjct: 69740 ATT-A-TTTTCATATAAAAACTTCAGGATTTTTTTCTACCATTTTTGATCAGTTTTACTT 69797 Query: 1638 TACTGAACTATAAGAGTTATAGATTTCCTTAATCTTAT-TAATTTACTGGACAGAGCAGC 1580 TA GAA AT A A T ATA T T C TAATCTT T TAA TT T G CA G AG Sbjct: 69798 TA--GAAAAATGAAA-TAATAC-TGTGCATAATCTTTTATAACTTGTTTGGCACTGAAGT 69853 Query: 1579 AGACTTGTAATTTAACTTAGTGATGCTGTGGTTTTTTGAGTATCTAAAGGAAAA-GAACA 1521 A TTGTA T A TT GTGA T TT T AG AT A A A G A A Sbjct: 69854 ACTTTTGTAGGT-ATTTTTGTGAACATCATAATTATGCAGCATAGTATTTAGTATGTATA 69912 Query: 1520 TA-AATGTTTCAGGATATGACTAAGAAAAATATAGCCTATATTACTTTGTCTAGCCTGTT 1462 T AAT T G A AT A TA G AAT T TA ATT CTTT T GC T T Sbjct: 69913 TCCAATTCTATTGTA-ATTAATA-GTGTAATTTTTAATAAATTCCTTT-TGG-GCGTTTG 69968 Query: 1461 TTTGTACTGTATGCCAAGCCATTTGAAAATGCTCATTTTTGA-CTTGAAGTGACTACCAA 1403 TGT TG AT T T AAAAT CT ATT TGA C T GT A AC AA Sbjct: 69969 AATGTTTTG-ATTTTTTTTAGTAT-AAAAT-CTAATTGGTGAACATT--GTTAA-ACTAA 70022 Query: 1402 CATTTTCATGAACTTCA 1386 CAT TT TG ACTT A Sbjct: 70023 CATCTT--TGTACTTTA 70037 >L22660 Rat polymeric immunoglobulin receptor mRNA. Length = 326 Plus Strand HSPs: Score = 343 (51.5 bits), Expect = 8.0e-08, P = 8.0e-08 Identities = 115/161 (71%), Positives = 115/161 (71%), Strand = Plus / Plus Query: 2166 AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGA 2224 AGC AGGA AAG GA CAG AA A GGAG G CA GG GA A A AAG Sbjct: 71 AGCAGGAGGAGAAGGAGGAA-CAGGAACAGGAGGAGGAG-CAGGGG-GAGGAGAAAAAGG 127 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AG AGGA GAGGAGGAAGA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA G Sbjct: 128 AGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 187 Query: 2285 AAGAAGATGAAGATGA--AGAAGAAGATGATGATGATGAATAAG 2326 A GA GA GA GA GA AGAAGAAGA GA GA GA GAA AAG Sbjct: 188 AGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAG 231 Score = 339 (50.9 bits), Expect = 1.2e-07, P = 1.2e-07 Identities = 93/119 (78%), Positives = 93/119 (78%), Strand = Plus / Plus Query: 2207 AGGCTGAAAA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AGG GA A AAG AAGAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA Sbjct: 197 AGGAGGAGGAGAAG-AAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 254 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AA Sbjct: 255 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAA 314 Score = 339 (50.9 bits), Expect = 1.2e-07, P = 1.2e-07 Identities = 93/119 (78%), Positives = 93/119 (78%), Strand = Plus / Plus Query: 2207 AGGCTGAAAA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AGG GA AA AAG AAGAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA Sbjct: 200 AGGAGGAGAAGAAG-AAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 257 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA AA AA Sbjct: 258 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAA 317 Score = 330 (49.5 bits), Expect = 3.1e-07, P = 3.1e-07 Identities = 84/105 (80%), Positives = 84/105 (80%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AGAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAG Sbjct: 206 AGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 264 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 265 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 309 Score = 314 (47.1 bits), Expect = 1.7e-06, P = 1.7e-06 Identities = 86/112 (76%), Positives = 86/112 (76%), Strand = Plus / Plus Query: 2214 AAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGA 2273 AA AAG AAGAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA Sbjct: 214 AAGAAG-AAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 271 Query: 2274 GGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA A A AA AA Sbjct: 272 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAAAAA 323 Score = 304 (45.6 bits), Expect = 4.8e-06, P = 4.8e-06 Identities = 108/155 (69%), Positives = 108/155 (69%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAA-AGCAAGAAAAA 2228 AGGAA AG GA G AG A A GGAG G AGG GA A AG A GA A Sbjct: 143 AGGAAGAGGAGGAGG-AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG 201 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GA GGA GA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGA Sbjct: 202 GA-GGA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 259 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 260 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 297 Score = 189 (28.4 bits), Expect = 0.82, P = 0.56 Identities = 67/92 (72%), Positives = 67/92 (72%), Strand = Plus / Plus Query: 2230 AAGGAAG-AGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 AA GAAG AGGAGGA A GAGGAA A GAA AGGA GAGGAG AGG GGA GA GAA A Sbjct: 66 AAAGAAGCAGGAGGAGAAGGAGGAACAGGAACAGGAGGAGGAGCAGGGGGAGGA-GAAAA 124 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 AG GA GA GA GA GA GA GA GA G GA Sbjct: 125 AG--GAGGAGGAGGAGGAGGAGGAAGA-G--GA 152 >U00763 Rattus norvegicus clone2 polymeric immunoglobulin receptor mRNA 3' Length = 302 Plus Strand HSPs: Score = 343 (51.5 bits), Expect = 8.6e-08, P = 8.6e-08 Identities = 115/161 (71%), Positives = 115/161 (71%), Strand = Plus / Plus Query: 2166 AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGA 2224 AGC AGGA AAG GA CAG AA A GGAG G CA GG GA A A AAG Sbjct: 52 AGCAGGAGGAGAAGGAGGAA-CAGGAACAGGAGGAGGAG-CAGGGG-GAGGAGAAAAAGG 108 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AG AGGA GAGGAGGAAGA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA G Sbjct: 109 AGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 168 Query: 2285 AAGAAGATGAAGATGA--AGAAGAAGATGATGATGATGAATAAG 2326 A GA GA GA GA GA AGAAGAAGA GA GA GA GAA AAG Sbjct: 169 AGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAG 212 Score = 317 (47.6 bits), Expect = 1.3e-06, P = 1.3e-06 Identities = 115/165 (69%), Positives = 115/165 (69%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTG 2203 G AGGA A G G A A GA C AGGA AGC G G AG A AAAA GGAG G Sbjct: 56 GGAGGAGAAGGAGGAACAG-GAACAGGAGGAGGAGCAGGGGG-AGGAGAAAAAGGAGGAG 113 Query: 2204 TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 AGG GA A G AAGA A GA GGA GAGGAGGA GA GAGGA GA GA GAGG Sbjct: 114 G--AGGAGGAGGAG-G-AAGAGGAGGA-GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 168 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGA 2309 A GAGGAGGAGGAGGA GA GAAGAAGA GAAGA GAAGAAGAAGA Sbjct: 169 AGGAGGAGGAGGAGGAGGA-GAAGAAGAAGAAGAAGAAGAAGAAGA 213 Score = 189 (28.4 bits), Expect = 0.88, P = 0.59 Identities = 67/92 (72%), Positives = 67/92 (72%), Strand = Plus / Plus Query: 2230 AAGGAAG-AGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 AA GAAG AGGAGGA A GAGGAA A GAA AGGA GAGGAG AGG GGA GA GAA A Sbjct: 47 AAAGAAGCAGGAGGAGAAGGAGGAACAGGAACAGGAGGAGGAGCAGGGGGAGGA-GAAAA 105 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 AG GA GA GA GA GA GA GA GA G GA Sbjct: 106 AG--GAGGAGGAGGAGGAGGAGGAAGA-G--GA 133 >D14636 Mouse mRNA for PEBP2a1 protein, complete cds. Length = 6518 Minus Strand HSPs: Score = 396 (59.4 bits), Expect = 9.0e-08, P = 9.0e-08 Identities = 116/158 (73%), Positives = 116/158 (73%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TCCTC TCCT Sbjct: 5264 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCT 5323 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCC 2208 C TCCTCTTC TCTTCCTC TC TC TCCTCTTCCT CTT TCTT CT TT TC CC Sbjct: 5324 CTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCT-CTTCCTCTTCCTCTTCCTCTTCC 5382 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTA 2169 T C CT C T TT T CT C TC CT TTTA Sbjct: 5383 TCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTAGGGTTTA 5421 Score = 393 (59.0 bits), Expect = 1.2e-07, P = 1.2e-07 Identities = 127/179 (70%), Positives = 127/179 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 5252 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 5311 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCC 2208 C TCCTCTTC TCTTCCTC TC TC TCCTCTTCCT CTT TCTT CT TT TC CC Sbjct: 5312 CTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCT-CTTCCTCTTCCTCTTCCTCTTCC 5370 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAATATCC 2148 T C CT CCT TT T CT C TC CTT C T T CTC TA G AA ATCC Sbjct: 5371 TCTTCCTCTTCCTCTTCTTCTTCTTCTT-CTT-CTTCTTCCTCC-TAGGGTTTAAAATCC 5427 Score = 370 (55.5 bits), Expect = 1.4e-06, P = 1.4e-06 Identities = 114/156 (73%), Positives = 114/156 (73%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 5246 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 5305 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCC 2208 C TC TCTTC TCTTCCTC TC TC TCCTCTTCCT CTT TCTT CT TT TC CC Sbjct: 5306 CTTCTTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCT-CTTCCTCTTCCTCTTCCTCTTCC 5364 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTT 2171 T C CT CCT TT CT C TC CTT T CTT Sbjct: 5365 TCTTCCTCTTCCTCTTCCTCTTCTTCTT-CTTCTTCTT 5401 Score = 360 (54.0 bits), Expect = 4.0e-06, P = 4.0e-06 Identities = 118/166 (71%), Positives = 118/166 (71%), Strand = Minus / Plus Query: 2335 TAGAACCAACT-TATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCC 2277 TAGA C CT T TC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC Sbjct: 5230 TAGAGCAGTCTGTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 5289 Query: 2276 TCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT 2217 TC TC TC TC TC TCTTC TCTTCCTC TC TC TCCTCTTCCT CTT TCTT CT Sbjct: 5290 TCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCTTCCT-CTTCCTCTTCCTC 5348 Query: 2216 TTT-TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTT 2171 TT TC CCT C CT CCT TT CT C TC CTT T CTT Sbjct: 5349 TTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTT-CTTCTTCTT 5395 >E08995 DNA encoding a protein involved in Leucocytozoon phylaxis. Length = 1686 Plus Strand HSPs: Score = 391 (58.7 bits), Expect = 1.0e-07, P = 1.0e-07 Identities = 123/162 (75%), Positives = 123/162 (75%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAA-AAG-GGA-GTTGTC-AAG--GCTGAA-AAAAGCAA 2222 AAG A AAG TGA G AG A AA AAG GGA G TG AAG G GAA AAAA AA Sbjct: 188 AAGAACAAGA-TGAAGAAGAACAAGAAGAGGAAGATGAAGAAGAAGAAGAAGAAAAAGAA 246 Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GAG AAGA Sbjct: 247 GAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGCAAGA 305 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 TGAAGAAGA GAAGA GAAGAAGAA A GATGA GATGAA AAG Sbjct: 306 TGAAGAAGAAGAAGAAGAAGAAGAACAAGATGAAGATGAAGAAG 349 Score = 381 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07 Identities = 119/163 (73%), Positives = 119/163 (73%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCA 2221 GAG A A GAA A GA G AG AAAA A G AG G A G GAA AA AAG A Sbjct: 214 GAGGAAGATGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-A 272 Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AGAA AAGAAG AAGA GA GAAGA GAG AAGATGAAGA GA GA GA GA GA GAA Sbjct: 273 AGAAGAAGAAG-AAGAAGAAGAAGAAGAGCAAGATGAAGAAGAAGAAGAAGAAGAAGAAC 331 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GA GAAGATGAAGA GAAGAAGAAGATGA GA GA GAA AAG Sbjct: 332 AAGATGAAGATGAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAAG 376 Score = 372 (55.8 bits), Expect = 7.7e-07, P = 7.7e-07 Identities = 122/170 (71%), Positives = 122/170 (71%), Strand = Plus / Plus Query: 2160 ATATCG-AGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAA 2218 A ATCG AG AA A A C GATG AG A AA A G AG G AAG TGAA AA Sbjct: 173 AAATCGTAGAAGAACAAGAACAAGATGAAGAAGAACAAGAAGAGG--AAGA-TGAAGAA- 228 Query: 2219 GCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGG 2278 G AAGAA AAGAA AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA G Sbjct: 229 G-AAGAAGAAGAAA-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 286 Query: 2279 AAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 AAGA GAAGAAGA AAGATGAAGAAGAAGA GA GA GA GAA AAG TG Sbjct: 287 AAGAAGAAGAAGAGCAAGATGAAGAAGAAGAAGAAGAAGAAGAACAAGATG 337 Score = 352 (52.8 bits), Expect = 6.4e-06, P = 6.4e-06 Identities = 112/155 (72%), Positives = 112/155 (72%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 AAG AAA GA G AG A AA A G AG G AAG GAA AA G AAGAA AAGA Sbjct: 236 AAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAG--AAGAA-GAAGAA-G-AAGAAGAAGA 290 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 AG AAGA GAG AAGATGA GAAGA GAAGA GA GA GA A GA GAAGATGAAGAAG Sbjct: 291 AG-AAGAAGAGCAAGATGAAGAAGAAGAAGAAGAAGAAGAACAAGATGAAGATGAAGAAG 349 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 A GAAGA GA GAAGAAGA GA GA GA GAA AA Sbjct: 350 AAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAA 384 Score = 344 (51.6 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 118/159 (74%), Positives = 118/159 (74%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGT-CAAGGCTGAA-AA-AAGCAAGAAA 2226 AAG A AAG GA G AG A AA A G AG G CAAG TGAA AA AAG AAGAA Sbjct: 266 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAGCAAGA-TGAAGAAGAAG-AAGAAG 322 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AAGAAG AA A GA GAAGATGA GAAGA GAAGA GATGA GA GA GA GAAGA GAA Sbjct: 323 AAGAAG-AACAAGATGAAGATGAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAA 381 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 GAA A AA ATGAAGAAGAA A ATGA GATGAA AA TG Sbjct: 382 GAACA--AA-ATGAAGAAGAACAAAATGAAGATGAACAAAATG 421 Score = 340 (51.0 bits), Expect = 2.3e-05, P = 2.3e-05 Identities = 114/159 (71%), Positives = 114/159 (71%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAG A AAG GA G AG A AA A G AG G A G GAA AA AGCAAGA AA Sbjct: 251 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGCAAGATGAA 309 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG AAGA GA GAAGA GA AAGATGAAGA GA GA GA GA AG AAGATGAAGA Sbjct: 310 GAAG-AAGAAGAAGAAGAAGAACAAGATGAAGATGAAGAAGAAGA--AG-AAGATGAAGA 365 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 AGA GAAGA GAAGAAGAA A ATGA GA GAA AA TG Sbjct: 366 AGAAGAAGAAGAAGAAGAACAAAATGAAGAAGAACAAAATG 406 Score = 335 (50.3 bits), Expect = 3.9e-05, P = 3.9e-05 Identities = 111/154 (72%), Positives = 111/154 (72%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AA A A C GA G A CAA AA A G A T GT A G AA AA AAG A GAA A Sbjct: 146 AACAAGAACAAGAAGAA-CAAGAACAAGAAATCGTAGAAGAACAAGAACAAG-ATGAAGA 203 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAA AAGA GAGGAAGATGA GAAGA GAAGA GA A GA GA GA GAAGA GAAG Sbjct: 204 AGAAC-AAGAAGAGGAAGATGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAG 262 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATA 2324 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA A Sbjct: 263 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 299 Score = 334 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05 Identities = 110/156 (70%), Positives = 110/156 (70%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAG A AAG GA G AG A AA A G AG G A G GAA AA AGCAAGA AA Sbjct: 251 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGCAAGATGAA 309 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG AAGA GA GAAGA GA AAGATGAAGA GA GA GA GA GA GA GA GAAGA Sbjct: 310 GAAG-AAGAAGAAGAAGAAGAACAAGATGAAGATGAAGAAGAAGAAGAAGATGAAGAAGA 368 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGA GAAGA GAAGAA AA ATGA GA GA AA A G Sbjct: 369 AGAAGAAGAAGAAGAACAAAATGAAGAAGAACAAAATG 406 Score = 321 (48.2 bits), Expect = 0.00017, P = 0.00017 Identities = 115/162 (70%), Positives = 115/162 (70%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA AG AG TG A G GAA AA AAG AAGAA A Sbjct: 275 AAGAAGAAGAA-GAAGAAGAAGAAGAGCAAGATGAAGAAGAAGAAGAAGAAG-AAGAACA 332 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA---TG 2284 AGA G AAGA GA GAAGA GA GAAGATGAAGA GA GA GA GA GA GAA A TG Sbjct: 333 AGATG-AAGATGAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAACAAAATG 391 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 AAGAAGA AA ATGAAGA GAA A ATGA GATGAA AA TG Sbjct: 392 AAGAAGAACAAAATGAAGATGAACAAAATGAAGATGAACAAAATG 436 Score = 321 (48.2 bits), Expect = 0.00017, P = 0.00017 Identities = 129/187 (68%), Positives = 129/187 (68%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAG A A G TG A AT AG AAG A AAG TGA G AG A AA A G AG G Sbjct: 325 GAAGAACAA-GATGAAGATGAAGAAGAAGAAGAAGA-TGAAGAAGAAGAAGAAGAAGAAG 382 Query: 2204 T-CAAGGCTGAAAAAAGCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAG 2260 CAA TGAA AA G AA AAAA GAAG GAA A A GAAGATGA AA ATGAAG Sbjct: 383 AACAAAA-TGAAGAA-G-AACAAAATGAAGATGAACAAAATGAAGATGAACAAAATGAAG 439 Query: 2261 AGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAA---GATGAAGAAGAAGATGATGATG 2317 A GA GA GA GA GA GAAGA GAA AA A GAA GATGAAGAAGAA A GATGA G Sbjct: 440 AAGAAGAAGAAGAAGAAGAAGAAGAACAACAAGAACAAGATGAAGAAGAACAAGATGAAG 499 Query: 2318 ATGAATAAGTTG 2329 A GAA AAG TG Sbjct: 500 AAGAACAAGATG 511 Score = 319 (47.9 bits), Expect = 0.00022, P = 0.00022 Identities = 125/186 (67%), Positives = 125/186 (67%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAA-AAGG-GA-G 2200 GAAG A A G G A A C AG T AAG A AAG GA G AG A AA AAG GA G Sbjct: 283 GAAGAAGAA-GAAGAAGAGCAAGATGAAGAAGAAGAA-GAAGAAGAAGAACAAGATGAAG 340 Query: 2201 TTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATG 2257 TG A G GAA AA A AAGAA AAGAAG GAAGA GA AA ATGA GAAGA Sbjct: 341 ATGAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAACAAAATGAAGAAGAAC 400 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 AA A GA GA GA A A GAAGATGAA AA ATGAAGA GAAGAAGAAGA GA GA G Sbjct: 401 AAAATGAAGATGAACAAAATGAAGATGAACAAAATGAAGAAGAAGAAGAAGAAGAAGAAG 460 Query: 2318 ATGAATAA 2325 A GAA AA Sbjct: 461 AAGAACAA 468 Score = 318 (47.7 bits), Expect = 0.00024, P = 0.00024 Identities = 110/159 (69%), Positives = 110/159 (69%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 AAG A A TGA G G A AAAA G AG TG AA C AA AAG AAGAA AAGA Sbjct: 395 AAGAACAAAATGAAGATGAACAAAATGAAGATG--AA--CAAAATGAAG-AAGAAGAAGA 449 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 AG AAGA GA GAAGA A AAGA AAGA GA GA GA A GA GAAGA GAA AAG Sbjct: 450 AG-AAGAAGAAGAAGAACAACAAGAACAAGATGAAGAAGAACAAGATGAAGAAGAACAAG 508 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 ATGAAGA GAAGAAGAAGA GA A GA GAA AAG TG Sbjct: 509 ATGAAGAAGAAGAAGAAGAAGAACAGGAAGAACAAGATG 547 Score = 318 (47.7 bits), Expect = 0.00024, P = 0.00024 Identities = 124/182 (68%), Positives = 124/182 (68%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTA-AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTT 2202 GAAG A AT G G A AT GA A AAG A AAG GA G AG A AA A AG Sbjct: 103 GAAGAAAAT-GAAGAAAAT-GAAAAAGAAGAACAAGAA-GAAGAAGAACAAGAACAAGAA 159 Query: 2203 GT-CAAGGCTGAAAAAAGCA-AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG 2260 G CAAG AA AAA C AGAA AA AAG AA A GA GAAGA GA AAGA GA G Sbjct: 160 GAACAAGAAC-AAGAAATCGTAGAAGAACAAG-AACAAGATGAAGAAGAACAAGAAGAGG 217 Query: 2261 AGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 A GATGA GA GA GA GAAGA AAGAAGA GAAGA GAAGAAGAAGA GA GA GA G Sbjct: 218 AAGATGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 277 Query: 2321 AATAAG 2326 AA AAG Sbjct: 278 AAGAAG 283 Score = 304 (45.6 bits), Expect = 0.0011, P = 0.0011 Identities = 110/159 (69%), Positives = 110/159 (69%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGT-CAAGGCTGAAAAA-AGCAAGAAAA 2227 AAG A AAG GA G AG A AAAA G AG G CAA TGAA A A CAA A A Sbjct: 365 AAGAAGAAGAA-GAAGAAGAACAAAATGAAGAAGAACAAAA-TGAAGATGAACAAAATGA 422 Query: 2228 AGAAGGA-AGAG-GAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AGA G A A A GA GAAGA GA GAAGA GAAGA GA GA A A GA AAGATGA Sbjct: 423 AGATGAACAAAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAACAAGAACAAGATGA 482 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGAAGA AAGATGAAGAAGAA A GATGA GA GAA AAG Sbjct: 483 AGAAGAACAAGATGAAGAAGAACAAGATGAAGAAGAAGAAG 523 Score = 300 (45.0 bits), Expect = 0.0016, P = 0.0016 Identities = 102/146 (69%), Positives = 102/146 (69%), Strand = Plus / Plus Query: 2181 TGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGG 2239 TGA G AG A AA A G AG G A G AA AA A CAAGA AAGAAG AA A G Sbjct: 435 TGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAACAAGAACAAGATGAAGAAG-AACAAG 493 Query: 2240 AGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATG 2299 A GAAGA GA AAGATGAAGA GA GA GA GA GA A GA GAA AAGATGAAGA Sbjct: 494 ATGAAGAAGAACAAGATGAAGAAGAAGAAGAAGAAGAACAGGAAGAACAAGATGAAGAAC 553 Query: 2300 AAGAAGAAGATGATGATGATGAATAAG 2326 AAGAAGAAG T AT ATG TGAA AAG Sbjct: 554 AAGAAGAAG-T-AT-ATGCTGAAAAAG 577 Score = 293 (44.0 bits), Expect = 0.0034, P = 0.0034 Identities = 133/202 (65%), Positives = 133/202 (65%), Strand = Plus / Plus Query: 2125 TTTATCCTCCCTTTGCTTTGGAAGGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGA 2183 T TAT T CCTT CTT AA ATA T A AT AG AAAG A AAG A Sbjct: 55 TATATTATTCCTT--CTTCA-AATAATAAAATTAAAAATGTAGAAAAAGAAGAAGAAA-A 110 Query: 2184 TGCAGCAAAAAAGGGAGTTGT-CAAGGCTGAAAAA-AGCAAGAAAAAGAAGGA-A-GAGG 2239 TG AG AAA A AG G CAAG GAA AA A CAAGAA AAGAAG A A GA Sbjct: 111 TGAAGAAAATGAAAAAGAAGAACAAGAA-GAAGAAGAACAAGAACAAGAAGAACAAGAAC 169 Query: 2240 AGGAAGAT-GAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGAT 2298 A GAA AT G GAAGA AAGA A GA GA GA GA AAGA GA GAAGATGAAGA Sbjct: 170 AAGAA-ATCGTAGAAGAACAAGAACAAGATGAAGAAGAACAAGAAGAGGAAGATGAAGAA 228 Query: 2299 GAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGAAGAAGA A GA GA GAA AAG Sbjct: 229 GAAGAAGAAGAAAAAGAAGAAGAAGAAG 256 Score = 288 (43.2 bits), Expect = 0.0058, P = 0.0058 Identities = 112/165 (67%), Positives = 112/165 (67%), Strand = Plus / Plus Query: 2165 GAGCTA-AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGT-CAAGGCTGAAAAAAGCA 2221 GA C A AAG A AAG TGA G AG A AA A G AG G CAAG TGAA AA G A Sbjct: 463 GAACAACAAGAACAAGA-TGAAGAAGAACAAGATGAAGAAGAACAAGA-TGAAGAA-G-A 518 Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AGAA AAGAAG AA AGGA GAA A GA GAAGA AAGA GA G A G GA AAG Sbjct: 519 AGAAGAAGAAG-AACAGGAAGAACAAGATGAAGAACAAGAAGAAGTATATGCTGAAAAAG 577 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 A A GAAGATGAAGA AA AAGAA A GA GA GA AA AAG TG Sbjct: 578 AAAATGAAGATGAAGAAAAAAAAGAAAAAGAAGAAGAACAAGAAGATG 625 Score = 255 (38.3 bits), Expect = 0.19, P = 0.18 Identities = 105/157 (66%), Positives = 105/157 (66%), Strand = Plus / Plus Query: 2170 AAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAA-GAAAA 2227 A AGGAA A C GATG AG A AA A G AGT T A GCTGAAAAA AA GAA A Sbjct: 531 ACAGGAAGAACAAGATGAAGAACAAGAAGAAGTA-T--ATGCTGAAAAAGAAAATGAAGA 587 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 GAAG AA A AG AA A GA GAAGA AAGA GATGA A A A A G TGAA Sbjct: 588 TGAAGAAAAAAAAGAAAAA-GAAGAAGAACAAGAAGATGAAAAA-AT-AT-ATGTTGAAA 643 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA AAGATGAAGAAG A ATG GA A GAA AAG Sbjct: 644 AAGAAAAAGATGAAGAAGTATATGTAGAAAAAGAACAAG 682 Score = 233 (35.0 bits), Expect = 2.0, P = 0.87 Identities = 83/120 (69%), Positives = 83/120 (69%), Strand = Plus / Plus Query: 2207 AGGCTGAA-AAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 A G TGAA AAAA AAGAAAAAGAAG AAGA A GAAGATGA AA AT A A G T Sbjct: 584 AAGATGAAGAAAAAAAAGAAAAAGAAG-AAGAACAAGAAGATGAAAAA-AT--ATATGTT 639 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GA A GA A GA GA GAAG A ATG AGA AAGAA AAGA AT T A GAAT A Sbjct: 640 GAAAAAGAAAAAGATGAAGAAGTATATGTAGAAAAAGAACAAGAACATTTTAAAGAATTA 699 Query: 2326 G 2326 G Sbjct: 700 G 700 >L13025 Rattus norvegicus (clone 2) mRNA sequence, 3' end GAA-triplet Length = 214 Plus Strand HSPs: Score = 343 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07 Identities = 115/161 (71%), Positives = 115/161 (71%), Strand = Plus / Plus Query: 2166 AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGA 2224 AGC AGGA AAG GA CAG AA A GGAG G CA GG GA A A AAG Sbjct: 52 AGCAGGAGGAGAAGGAGGAA-CAGGAACAGGAGGAGGAG-CAGGGG-GAGGAGAAAAAGG 108 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AG AGGA GAGGAGGAAGA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA G Sbjct: 109 AGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 168 Query: 2285 AAGAAGATGAAGATGA--AGAAGAAGATGATGATGATGAATAAG 2326 A GA GA GA GA GA AGAAGAAGA GA GA GA GAA AAG Sbjct: 169 AGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAG 212 Score = 317 (47.6 bits), Expect = 1.9e-06, P = 1.9e-06 Identities = 115/165 (69%), Positives = 115/165 (69%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTG 2203 G AGGA A G G A A GA C AGGA AGC G G AG A AAAA GGAG G Sbjct: 56 GGAGGAGAAGGAGGAACAG-GAACAGGAGGAGGAGCAGGGGG-AGGAGAAAAAGGAGGAG 113 Query: 2204 TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 AGG GA A G AAGA A GA GGA GAGGAGGA GA GAGGA GA GA GAGG Sbjct: 114 G--AGGAGGAGGAG-G-AAGAGGAGGA-GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 168 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGA 2309 A GAGGAGGAGGAGGA GA GAAGAAGA GAAGA GAAGAAGAAGA Sbjct: 169 AGGAGGAGGAGGAGGAGGA-GAAGAAGAAGAAGAAGAAGAAGAAGA 213 Score = 189 (28.4 bits), Expect = 1.2, P = 0.71 Identities = 67/92 (72%), Positives = 67/92 (72%), Strand = Plus / Plus Query: 2230 AAGGAAG-AGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 AA GAAG AGGAGGA A GAGGAA A GAA AGGA GAGGAG AGG GGA GA GAA A Sbjct: 47 AAAGAAGCAGGAGGAGAAGGAGGAACAGGAACAGGAGGAGGAGCAGGGGGAGGA-GAAAA 105 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 AG GA GA GA GA GA GA GA GA G GA Sbjct: 106 AG--GAGGAGGAGGAGGAGGAGGAAGA-G--GA 133 >M64933 Mouse nonfunctional sex-limited protein, and cytochrome P-450 Length = 26,307 Plus Strand HSPs: Score = 393 (59.0 bits), Expect = 1.3e-07, P = 1.3e-07 Identities = 121/163 (74%), Positives = 121/163 (74%), Strand = Plus / Plus Query: 2170 AAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAA 2226 AAAGGA AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA Sbjct: 20478 AAAGGAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAG 20535 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AAGAAGGAAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAA Sbjct: 20536 AAGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 20595 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGT-TGG 2330 GAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG TGG Sbjct: 20596 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTGG 20640 Score = 339 (50.9 bits), Expect = 3.9e-05, P = 3.9e-05 Identities = 115/162 (70%), Positives = 115/162 (70%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGA 2224 GAG AA GGA AG GA G AG A AA AGG G G AGG GA AAA G AGA Sbjct: 20431 GAGAGAAGGGAGAGGG-GA-G-AGAAGAAGAGGAGGAGGAGGAGGAGGAGAAAGG--AGA 20485 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAG G Sbjct: 20486 AGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG--G 20542 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 20543 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 20584 Score = 320 (48.0 bits), Expect = 0.00028, P = 0.00028 Identities = 112/157 (71%), Positives = 112/157 (71%), Strand = Plus / Plus Query: 2172 AGGAAAGCCTGA--TGCAGCAAAAA-AGGGAGTTGT-CA-AGGCTGAAAAAAGCAAGAAA 2226 AGG A CCT A T CA CAA A AG AG T CA AG GA A G AGA A Sbjct: 20373 AGGTCATCCTTAGCTACATCAAGACCAGTCAGGGCTACATAGTAAGACCTATGTCAGAGA 20432 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AGAAGG AGAGG GGA GA GA GAAGA GA GAGGA GAGGAGGAG A G AGA GAA Sbjct: 20433 GAGAAGGGAGAGG-GGA-GA-GAAGAAGAGGAGGAGGAGGAGGAGGAGAAAGGAGAAGAA 20489 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 20490 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 20529 Score = 307 (46.1 bits), Expect = 0.0011, P = 0.0011 Identities = 117/170 (68%), Positives = 117/170 (68%), Strand = Plus / Plus Query: 2157 TGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGT-TGTCA-AGGCTGAA 2214 T C TA C A T AAG AG C G GC CA A A G T TGTCA AG GAA Sbjct: 20379 TCCTTAGCTACATCAAGACCAGTCAGG-GCTACATAGTAAGACCTATGTCAGAGAGAGAA 20437 Query: 2215 AAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AG A G A AGAAG AAGAGGAGGA GA GAGGA GA GAA AGGA GA GA GA Sbjct: 20438 GGGAG-AGGGGAGAGAAG-AAGAGGAGGAGGAGGAGGAGGA-GAA-AGGA-GAAGAAGAA 20492 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT-AAG 2326 GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 20493 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAG 20545 Score = 305 (45.8 bits), Expect = 0.0014, P = 0.0014 Identities = 89/115 (77%), Positives = 89/115 (77%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGG--AG-GAAGATGAGGAAGATGAAGAGGATGAGGA-GGAGGAG 2277 AGA A AGAAGG AGAGG AG GAAGA GAGGA GA GA GAGGA GAG A GGAG AG Sbjct: 20428 AGAGAGAGAAGGGAGAGGGGAGAGAAGAAGAGGAGGAGGAGGAGGAGGAGAAAGGAGAAG 20487 Query: 2278 --GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG GG Sbjct: 20488 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGG 20542 Minus Strand HSPs: Score = 264 (39.6 bits), Expect = 0.10, P = 0.096 Identities = 106/156 (67%), Positives = 106/156 (67%), Strand = Minus / Plus Query: 2320 CATCATCAT-CATC-TTCTTCTTCATCTTCATCTTC-TTCATCTTCCTCCTCCTCCTCAT 2264 C TC CAT CATC TTCTTCT C TC TC T TC TTC TCTTCCTCCTCC CC C T Sbjct: 9036 CTTCTCCATGCATCCTTCTTCT-CTTCCTCCTTGTCCTTC-TCTTCCTCCTCCCCC-C-T 9091 Query: 2263 CCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCTTGA 2204 CCTCT C TCTTC TC TC T CTCCTCTT CT CT T CTTGC T TTC CCT Sbjct: 9092 CCTCTCCCTCTTCATCTTCCTTCTCCTCTTTCTCCTCCTCCTTGCCCTCTTCCTCCTCCT 9151 Query: 2203 CAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTC 2165 CTCC T T TGC C TC CT CC TT CTC Sbjct: 9152 TCCCTCC-TCCTCTGCCTCCTCCTCCTCCCCCTTC-CTC 9188 Score = 242 (36.3 bits), Expect = 1.0, P = 0.64 Identities = 76/103 (73%), Positives = 76/103 (73%), Strand = Minus / Plus Query: 2312 TCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCT 2253 TC TCTTC TCTTC TCTTC TC TC TC CTTC TCCT CTCCTC TCCTC TC TC Sbjct: 23469 TCCTCTTCCTCTTCCTCTTCCTCCTCCTC--CTTC-TCCTTCTCCTCTTCCTCCTCTTCC 23525 Query: 2252 TCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAG 2210 TCCT TCTTCCTCCTC TCC C T CT CTT TTT AG Sbjct: 23526 TCCTGTTCTTCCTCCTCCTCCACCACTCCCT--CTTCTTTAAG 23566 Score = 232 (34.8 bits), Expect = 2.9, P = 0.94 Identities = 100/151 (66%), Positives = 100/151 (66%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT-CC-TCAT 2264 TC TCATC TC T TC TCTT TC TC TC T C TCTTCCTCCTCCT CC TC T Sbjct: 9100 TCTTCATCTTCCTTCTCCTCTTTCTCCTCCTCCTTGCCCTCTTCCTCCTCCTTCCCTCCT 9159 Query: 2263 CCTCTTCATCTTCCTCATCTTCCT-CCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCTTG 2205 CCTCT C TC TCCTC TC CCT CCTC CCT CT TT T CT T CA C TT Sbjct: 9160 CCTCTGCCTCCTCCTCCTCCCCCTTCCTCCCCCTCCTCTTAATC-CTCCTCCCATC-TTC 9217 Query: 2204 ACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTT 2171 A A CTCC T T T T C TC CT TCCTT Sbjct: 9218 ATA-CTCCTTCTCCTCTTCCCTCTC-CTCCTCCTT 9250 Score = 231 (34.7 bits), Expect = 3.2, P = 0.96 Identities = 83/116 (71%), Positives = 83/116 (71%), Strand = Minus / Plus Query: 2277 CTCCTCCTCCTCATCCTCTTCATCTTCCTCAT-CTTC--CTCCTCTTCCTTCTTTTTCT- 2222 CTCCTC TCCTC TCCTCTTC TC TCCTC T CT C CTCCTCTTCCT CT TT CT Sbjct: 23468 CTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTTCTCCTTCTCCTCTTCCTCCTCTTCCTC 23527 Query: 2221 -TGCTTTTT-TCAGCCTTGACAACTCCCTTTT-TTGCTGCATCAGGCTTTCCTTTAG 2168 TG T TT TC CCT AC ACTCCCT TT TT G AT AGG TT CT TAG Sbjct: 23528 CTGTTCTTCCTCCTCCTCCACCACTCCCTCTTCTTTAAG-ATTAGGTCTTACTATAG 23583 Score = 228 (34.2 bits), Expect = 4.4, P = 0.99 Identities = 68/92 (73%), Positives = 68/92 (73%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATC-TTCATCTTCTTCATCTTCCTCCTCCTCCTCATC 2263 TC TC TC TC TCTTC TC TC TC TTC CTTCT C TCTTCCTCCTC TCCTC T Sbjct: 23472 TCTTCCTCTTCCTCTTCCTCCTCCTCCTTCTCCTTCTCC-TCTTCCTCCTCTTCCTCCTG 23530 Query: 2262 CTCTTCATCTTCCTCATCTTCCTCCTCTTCCTT 2230 TCTTC TC TCCTC C C CCTCTTC TT Sbjct: 23531 TTCTTCCTCCTCCTCCACCACTCCCTCTTCTTT 23563 >X17093 Human HLA-F gene for human leukocyte antigen F Length = 4316 Plus Strand HSPs: Score = 388 (58.2 bits), Expect = 2.0e-07, P = 2.0e-07 Identities = 120/155 (77%), Positives = 120/155 (77%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAA-A-AAGCAAGAAAAA 2228 AGGA AG GA G AG AAA AAGG AG G AAGG GAA A AAG AAGA AA Sbjct: 104 AGGAGCAGGAGGAGG-AGGAAAGAAGG-AGGAG--AAGGA-GAAGGAGAAG-AAGAGGAA 157 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GA GGAAGAGGA GAAGA GA GAAGA GAAGAGGA GAGGA GAGGA GAAGA GAAGA Sbjct: 158 GA-GGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGA 216 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 217 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 254 Score = 383 (57.5 bits), Expect = 3.3e-07, P = 3.3e-07 Identities = 119/157 (75%), Positives = 119/157 (75%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGG-G-AGTTGTC-AAGGCTGAAAAA-AGCAAGAAA 2226 AGGA AG GA G AG AAA AAGG G AG G AAGG GAA AA AG AAGA Sbjct: 104 AGGAGCAGGAGGAGG-AGGAAAGAAGGAGGAGAAGGAGAAGGA-GAAGAAGAGGAAGAGG 161 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AAGA GGAAGA GA GAAGA GA GAAGA GAAGAGGA GAGGA GA GA GAAGA GAA Sbjct: 162 AAGA-GGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAA 220 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 221 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 260 Score = 373 (56.0 bits), Expect = 9.5e-07, P = 9.5e-07 Identities = 119/158 (75%), Positives = 119/158 (75%), Strand = Plus / Plus Query: 2172 AGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAAA 2228 AGGA AAG GA G AG A AA AGG AG G AGG GAA AA AAG AAGAA AA Sbjct: 130 AGGAGAAGGA-GAAGGAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAG-AAGAAGAA 187 Query: 2229 GAAGGAAGAGGA-G-G-AAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 GA GGAAGAGGA G G AAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GA Sbjct: 188 GA-GGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 246 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 247 AGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAAGAAG 287 Score = 365 (54.8 bits), Expect = 2.2e-06, P = 2.2e-06 Identities = 115/162 (70%), Positives = 115/162 (70%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAG 2223 GAGC AGGA G A G AG A A A GGAG G A G GA AA AG AAG Sbjct: 106 GAGCAGGAGGAG-GAGGAAAGAAGGAGGAGAAGGAGAAGGAGAAGAAGAGGAAGAGGAAG 164 Query: 2224 AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 A AAGAAG AAGA GA GAAGA GAGGAAGA GAAGAGGA GA GA GA GA GAAGA Sbjct: 165 AGGAAGAAG-AAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAA 223 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 224 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 266 Score = 339 (50.9 bits), Expect = 3.4e-05, P = 3.4e-05 Identities = 125/183 (68%), Positives = 125/183 (68%), Strand = Plus / Plus Query: 2170 AAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAA 2227 A AGGAA AG GA G AG A AA A G AG G AGG GA AA AG AAGAA A Sbjct: 151 AGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAAGA 210 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 211 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 269 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCT-AGCGCA-GTTTT 2345 A GA GAAGA GAAGAAGAAGA TG T T A A TT TTCT AG CA GTT Sbjct: 270 AGGAAGAAGAGGAAGAAGAAGAAACTG-TC-TCTAGACCTTCATTCTCAGGACAAGTTCA 327 Query: 2346 TTTTTT 2351 TT T T Sbjct: 328 TTGTCT 333 Score = 228 (34.2 bits), Expect = 4.1, P = 0.98 Identities = 68/92 (73%), Positives = 68/92 (73%), Strand = Plus / Plus Query: 2235 AGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA-GATGAAGAAGATG 2293 AGAG AG AAGA GAGG G G GAGGA AGGAGGAGGAGGAA GA G AG AGA G Sbjct: 79 AGAGAAG-AAGAGGAGGGGGGCGGGGAGGAGCAGGAGGAGGAGGAAAGAAGGAGGAGAAG 137 Query: 2294 AAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGA G AGAAGAAGA GA GA GA GA AAG Sbjct: 138 GAGAAGGAGAAGAAGAGGAAGAGGAAGAGGAAG 170 >U02506 Rattus norvegicus clone 7 polymeric immunoglobulin receptor mRNA, Length = 648 Plus Strand HSPs: Score = 357 (53.6 bits), Expect = 2.7e-07, P = 2.7e-07 Identities = 115/161 (71%), Positives = 115/161 (71%), Strand = Plus / Plus Query: 2166 AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGA 2224 AGC AGGA AAG GA CAG AA A GGAG G CA GG GA A A AAG Sbjct: 109 AGCAGGAGGAGAAGGAGGAA-CAGGAACAGGAGGAGGAG-CAGGGG-GAGGAGAAAAAGG 165 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AG AGGA GAGGAGGAAGA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA G Sbjct: 166 AGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 225 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GA GA GA GA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 226 AGGAGGAGGAGGA-GAAGAAGAAGAAGAAGAAGAAGAAGAAG 266 Score = 355 (53.3 bits), Expect = 3.6e-07, P = 3.6e-07 Identities = 97/124 (78%), Positives = 97/124 (78%), Strand = Plus / Plus Query: 2207 AGGCTGAAAA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AGG GA AA AAG AAGAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA Sbjct: 232 AGGAGGAGAAGAAG-AAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 289 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AA Sbjct: 290 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 349 Query: 2326 GTTGG 2330 TT G Sbjct: 350 ATTAG 354 Score = 337 (50.6 bits), Expect = 4.7e-06, P = 4.7e-06 Identities = 145/214 (67%), Positives = 145/214 (67%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAAA 2228 AGGA AG GA G AG A A GGAG G A G GAA AA AAG AAGAA AA Sbjct: 205 AGGAGGAGGAGGAGG-AGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAG-AAGAAGAA 262 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGA Sbjct: 263 GAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 321 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGAT-GAATAAGTTG-GTTCTAGCGCAGTTTTT 2346 AGA GAAGA GAAGAAGAAGA GA GA T GAA AAG G AG CA T Sbjct: 322 AGAAGAAGAAGAAGAAGAAGAAGAAGAAATTAGAAGAAGAAAAGAAGAAGGACAAATGGC 381 Query: 2347 T-TTTTCTTGTCTATAAAGCATTTAACCCCCCTGT-ACACA 2385 T TTTTCT GTCT A C TTT CC CCTGT AC CA Sbjct: 382 TCTTTTCTGGTCTC---ACCTTTTC-CCTTCCTGTCACTCA 418 Score = 282 (42.3 bits), Expect = 0.0038, P = 0.0038 Identities = 76/99 (76%), Positives = 76/99 (76%), Strand = Plus / Plus Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AG AG AA AGGAGGA GA GAGGA GA GAAGAGGA GAGGAGGAGGAGGA GA GA G Sbjct: 154 AGGAGAAAAAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGG 213 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GA GA GA GA GA GA GA GA GA GA GAA AAG Sbjct: 214 AGGAGGAGGAGGAGGAGGAGGAGGA-GAAGAAGAAGAAG 251 >AL021332 Human DNA sequence from PAC 398A12 on chromosome 6p23-25.1. Length = 90,169 Plus Strand HSPs: Score = 386 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07 Identities = 120/156 (76%), Positives = 120/156 (76%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAA-AA-AAG-GGAGTTGTCAAGGCTGAAAAA-AGCAAGAAA 2226 AAG AAAG GA G A AA AA AAG GGAG G AGG GA AAA AG AAGAA Sbjct: 36778 AAGAAAAGGAAGAAGAAAGAAGAAGAAGAGGAGGAGG--AGGAGGAGAAAGAG-AAGAAG 36834 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AAGAAGGA GAGGAGGA GA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA GA Sbjct: 36835 AAGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGA- 36893 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAA A GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 36894 GAAAAAGAAGAAGAAGAAGAAGA-GAAGAAGAAGAAGAAG 36932 Score = 362 (54.3 bits), Expect = 3.5e-06, P = 3.5e-06 Identities = 122/167 (73%), Positives = 122/167 (73%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGA-AAAAAGCA-A-GAAA 2226 AGGAA AG GA G AG A AA GGAG G AGG GA AAAAAG A A GAA Sbjct: 36851 AGGAAGAGGAGGAGG-AGGAGGAAGAGGAGGAGGAGGAGGAGGAGAAAAAGAAGAAGAAG 36909 Query: 2227 AAGAAG-GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AAGAAG GAAGA GA GAAGA GAGGAAGA GAAGAGGA GAGGA GA GA GAAGA GA Sbjct: 36910 AAGAAGAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGA 36969 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGA--TGATGATGAATAAGTTGGTT 2332 AGAAGA GAAGA GAAGAAGAAGA GA T TGA AAT A TT TT Sbjct: 36970 AGAAGAAGAAGAAGAAGAAGAAGAAGAACTTTTGAA-AATGACTTCATT 37017 Score = 313 (47.0 bits), Expect = 0.00060, P = 0.00060 Identities = 129/188 (68%), Positives = 129/188 (68%), Strand = Plus / Plus Query: 2146 AAGGATAT-TGCTGCATATCGAGCTAAAGGA--AAGCCTGAT-GCAGCAAAAA-AGGGAG 2200 AAG ATAT T CTG A A G T AAG A AAG A G AG A AA AGG AG Sbjct: 36710 AAGTATATATTCTGAAAAAGGGTTTCAAGCATGAAGAAGAAGAGGAGGAGAAGGAGGAAG 36769 Query: 2201 TTGTCAAGGCTGAAAA--AAGCAAGAAA-AAGAAGGA-AG-AGGAGGAAGATGAGGAAGA 2255 G AAG GAAAA AAG AAGAAA AAGAAG A AG AGGAGGA GA GAG AAGA Sbjct: 36770 AAGAAAAGAA-GAAAAGGAAG-AAGAAAGAAGAAGAAGAGGAGGAGGAGGAGGAGAAAGA 36827 Query: 2256 TGAAGAGGATGA-GGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG 2314 GAAGA GA GA GGAGGAGGAGGA GA GA GA GA GA GA GAAGA GA GA GA G Sbjct: 36828 -GAAGAAGAAGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGG 36886 Query: 2315 ATGATGAATAA 2325 A GA GA AA Sbjct: 36887 AGGAGGAGAAA 36897 >U65590 Homo sapiens IL-1 receptor antagonist IL-1Ra (IL-1RN) gene, Length = 33,414 Minus Strand HSPs: Score = 384 (57.6 bits), Expect = 3.5e-07, P = 3.5e-07 Identities = 146/213 (68%), Positives = 146/213 (68%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCC 2271 CC CTT T C TC TC TC TCTTCTTCTTC TCTTC TC TCTTC TCTTC TCCTCC Sbjct: 19191 CCTCCTTCTCC-TCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCCTCC 19249 Query: 2270 TCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCA 2211 TCCTC TCCTCTTC TCTTC TC TCTTCCTC TC TC TTC T TTCTT CT TT C Sbjct: 19250 TCCTCCTCCTCTTCTTCTTCTTCTTCTTCCTCTTCCTC-TTCCTCTTCTTCCTCTTC-CT 19307 Query: 2210 GCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATA-TGCA-GCAA 2153 C T C CT C T T T C C TC G CTT TTTA T A A TG A GCAA Sbjct: 19308 -CTTATTCTTCTTCGTCGTCTTCGTCTTC-GTCTTCTTTTTATTTTCAAAGTGAAAGCAA 19365 Query: 2152 TATCCTTCC-AAAGCAAAGGGAGGATAAAACAGTAG 2118 T TT AAAG AAAGG A ATAAAA A T G Sbjct: 19366 GTTTATTAAGAAAGTAAAGG-A--ATAAAAGAATGG 19398 Score = 341 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05 Identities = 123/178 (69%), Positives = 123/178 (69%), Strand = Minus / Plus Query: 2322 TTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATC 2263 TTC TC TC TC TCTTCTTCTTC TC C T TC TC TCTTC TCCTCCTCCT TC Sbjct: 19141 TTCTTCTTCTTCTTCTTCTTCTTCCTCCCCCTTCTCCTCTTCTTCTTCCTCCTCCTTCTC 19200 Query: 2262 CTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT--TCAGCCTTG 2205 CTCTTC TCTTC TC TCTTC TC TCTTCCT CTT TTCTT CTT T TC CCT Sbjct: 19201 CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCT-CTTCTTCTT-CTTCCTCCTCCTCCTCC 19258 Query: 2204 ACAACTCCCTTTTTTGCTGCATCAGGCT-TTCCTTTAGCTCGATATGCAGCAATATCCTT 2146 C CT C T TT T CT C TC CT TTCCT T TC T T C C TAT CTT Sbjct: 19259 TCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCTTCTTCC-TCTTCCTCT-TATTCTT 19316 Query: 2145 C 2145 C Sbjct: 19317 C 19317 >AC004073 Human Chromosome X, complete sequence. Length = 79,612 Plus Strand HSPs: Score = 384 (57.6 bits), Expect = 3.5e-07, P = 3.5e-07 Identities = 100/121 (82%), Positives = 100/121 (82%), Strand = Plus / Plus Query: 2206 AAGGCTGAA-AA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 AA G GAA AA AAG AAGAA AAGAAG AAGAGGAGGA GA GAGGA GA GA GAGG Sbjct: 1133 AAAGAAGAAGAAGAAG-AAGAAGAAGAAG-AAGAGGAGGAGGAGGAGGAGGAGGAGGAGG 1190 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 A GAGGAGGAGGA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA Sbjct: 1191 AGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 1250 Query: 2324 AAG 2326 AAG Sbjct: 1251 AAG 1253 Score = 382 (57.3 bits), Expect = 4.3e-07, P = 4.3e-07 Identities = 96/115 (83%), Positives = 96/115 (83%), Strand = Plus / Plus Query: 2213 AAAAAAGCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 AAAAAAG AAGAA AAGAAG GAAGA GA GAAGA GAGGA GA GA GAGGA GAGGA Sbjct: 1130 AAAAAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGA 1188 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GGAGGAGGA GA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 1189 GGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 1244 Score = 365 (54.8 bits), Expect = 2.6e-06, P = 2.6e-06 Identities = 107/140 (76%), Positives = 107/140 (76%), Strand = Plus / Plus Query: 2188 GCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAA-GAAG--GAAGAGGAGGAA 2244 GC A A AG GAG TC G CT AAAAAA AA AAAAA GAAG GAAGA GA GAA Sbjct: 1096 GCGACAGAGCGAGAC-TCT-GTCTCAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAA 1153 Query: 2245 GATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAA 2304 GA GA GAAGA GA GAGGA GAGGAGGAGGAGGA GA GA GA GA GAAGA GAAGAA Sbjct: 1154 GAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAA 1213 Query: 2305 GAAGATGATGATGATGAATAAG 2326 GAAGA GA GA GA GAA AAG Sbjct: 1214 GAAGAAGAAGAAGAAGAAGAAG 1235 Score = 337 (50.6 bits), Expect = 4.8e-05, P = 4.8e-05 Identities = 133/202 (65%), Positives = 133/202 (65%), Strand = Plus / Plus Query: 2129 TCCTCCCTTTGCTTTGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAG 2188 TCC CCT GC GA GA A T CTG T TC A AAA AAA GA G AG Sbjct: 1086 TCCAGCCTGGGCGACAGAGCGAGACT-CTG--TCTCAAAAAAAAAAAAAAAAAGAAGAAG 1142 Query: 2189 CAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGAT 2247 A AA A G AG G AAG GA A AG A GA A GA GGA GAGGAGGA GA Sbjct: 1143 AAGAAGAAGAAGAAG--AAGAA-GAGGAGGAGGAGGAGGAGGA-GGAGGAGGAGGAGGAG 1198 Query: 2248 GAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAA 2307 GAGGAAGA GAAGA GA GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAA Sbjct: 1199 GAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 1258 Query: 2308 GATGATGATGATGAATAAGTTGG 2330 GA GA GA GA GAA AAG GG Sbjct: 1259 GAAGAAGAAGAAGAAGAAGAAGG 1281 Score = 335 (50.3 bits), Expect = 6.0e-05, P = 6.0e-05 Identities = 111/159 (69%), Positives = 111/159 (69%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAA AAAG GA G AG A AA A G AG G AGG GA A AG A GA A Sbjct: 1128 AAAAAAAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAG 1186 Query: 2229 GA--AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 GA AGGA GAGGAGGAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAA Sbjct: 1187 GAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 1246 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA GAAGA GAAGAAGAAGA GA GA GA G A AAG Sbjct: 1247 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAG 1286 Score = 325 (48.8 bits), Expect = 0.00017, P = 0.00017 Identities = 119/174 (68%), Positives = 119/174 (68%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAAAGCAAGAAAAAG 2229 AAG A AG GA G AG A A GGAG G AGG GA AA G AAGAA AAG Sbjct: 1158 AAGAAGAGGAGGAGG-AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAA-G-AAGAAGAAG 1214 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 AAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGAA Sbjct: 1215 AAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 1273 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAG-CGCAGTTT 2344 GA GAAG GAAGAAGAAGA G GA GA GAA AAG T CTAG C CA T T Sbjct: 1274 GAAGAAGGAGAAGAAGAAGAAGGAGAAGAGGAAGAAGATCAA-CTAGACACAATGT 1328 >X54171;X53282 H.sapiens NG2-6 DNA Length = 6221 Plus Strand HSPs: Score = 383 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07 Identities = 113/149 (75%), Positives = 113/149 (75%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAG-GGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGA 2240 GA G AG AAA A G GGAG G AAG GAA AA G AAGAA AAGAAGGA GAG A Sbjct: 4993 GAAGAAG-AAAGAGGAGGAGGAGGAAAGAAGGAAGAA-GAAAGAAGAAGAAGGAGGAGAA 5050 Query: 2241 G--GAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGAT 2298 G GAAGA GAGGA GA GAAGAGGATGAGGAGGA GAGGA GA G GAAGA GAAGA Sbjct: 5051 GAAGAAGAGGAGGAGGAGGAAGAGGATGAGGAGGAAGAGGAGGAGGTGGAAGAGGAAGAG 5110 Query: 2299 GAAGAAGAAGATGATGATGATGAATAAGTTG 2329 GAAGAAGA GAT TGATGATGA AA TG Sbjct: 5111 GAAGAAGAGGATTTTGATGATGAGGAAACTG 5141 Score = 348 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05 Identities = 122/172 (70%), Positives = 122/172 (70%), Strand = Plus / Plus Query: 2154 TGCTGCATATCGAGCTA-AAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCT 2211 TGCTGC A GAG A AAG AA AG GA G AG AAA AAGG AG G AAG Sbjct: 4980 TGCTGCTGAA-GAGGAAGAAGAAAGAGGAGGAGG-AGGAAAGAAGGAAGAAGA-AAGAA- 5035 Query: 2212 GAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAG 2271 GAA AA G AG A AAGAAG AAGAGGAGGA GA GA GA GATGA GAGGA GAGGAG Sbjct: 5036 GAAGAAGG--AGGAGAAGAAG-AAGAGGAGGAGGAGGAAGAGGATGAGGAGGAAGAGGAG 5092 Query: 2272 GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GAGG GGAAGA GAAGA GA GAAGA GA GA GATGA GA TGAA AA Sbjct: 5093 GAGGTGGAAGAGGAAGAGGAAGAAGAGGATTTTGATGATGAGGAAACTGAAGAA 5146 Score = 337 (50.6 bits), Expect = 4.4e-05, P = 4.4e-05 Identities = 119/170 (70%), Positives = 119/170 (70%), Strand = Plus / Plus Query: 2154 TGCTGCATATCGAGCTA-AAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGC 2210 TGCTGC A GAG A AAG AA AG GA G AG AAA AAGG AG G A A G Sbjct: 4980 TGCTGCTGAA-GAGGAAGAAGAAAGAGGAGGAGG-AGGAAAGAAGGAAGAAGAAAGAAGA 5037 Query: 2211 TGAAAAAAGC-AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG 2269 GAA A G AAGAA AAGA GGA GAGGAGGAAGA GA GA GA GAAGAGGA GAGG Sbjct: 5038 AGAAGGAGGAGAAGAAGAAGA-GGAGGAGGAGGAAGAGGATGAGGAGGAAGAGGAGGAGG 5096 Query: 2270 AGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 GGA GAGGAAGA GAAGAAGA GA TGA GA GA GA TGA GA AA Sbjct: 5097 TGGAAGAGGAAGAGGAAGAAGAGGATTTTGATGATGAGGAAACTGAAGAAAAA 5149 Score = 304 (45.6 bits), Expect = 0.0014, P = 0.0014 Identities = 114/165 (69%), Positives = 114/165 (69%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAAAGCAAGAAA-A 2227 A AG AAA TG TGC GC AA AGG AG G A AGG GA A G AAGAA A Sbjct: 4966 AGAGTAAAATTTGCTGCTGCTGAAGAGGAAGAAGAAAGAGGAGGAGGAG-GAAAGAAGGA 5024 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAG GAGGA GA GAAGA A GAGGAGGAGGAGGAAGA GA G Sbjct: 5025 AGAAGAAAGAAGAAGAAG--GAGGA-GAAGAAGA--A-GAGGAGGAGGAGGAAGAGGATG 5078 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCT 2334 A GA GAAGA GA GA G GA GA GA GA GAA AAG G TT T Sbjct: 5079 AGGAGGAAGAGGAGGAGGTGGAAGAGGAAGAGGAAGAAGAGGATTTT 5125 Score = 298 (44.7 bits), Expect = 0.0027, P = 0.0027 Identities = 108/156 (69%), Positives = 108/156 (69%), Strand = Plus / Plus Query: 2172 AGGAAAGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAG 2229 AGGAAAG GA G AG AA AA A G AG G A G GAA A AG A GA AAG Sbjct: 5013 AGGAAAGAAGGAAGAAGAAAGAAGAAGAAGGAGGAGAAGAAGAAGAGGAGGAGGAGGAAG 5072 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 A GGA GAGGAGGAAGA GAGGA G GAAGAGGA GAGGA GA GAGGA TGA GA Sbjct: 5073 A-GGATGAGGAGGAAGAGGAGGAGGTGGAAGAGGAAGAGGAAGAAGAGGATTTTGATGAT 5131 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATAAGT 2327 GA GAA TGAAGAA AAG TG A G TGAATAA T Sbjct: 5132 GAGGAAACTGAAGAAAAAG-TGCC-A-G-TGAATAAAT 5165 >S72345 RI beta =cAMP-dependent protein kinase RI beta subunit {exons I and Length = 3511 Minus Strand HSPs: Score = 382 (57.3 bits), Expect = 3.5e-07, P = 3.5e-07 Identities = 134/187 (71%), Positives = 134/187 (71%), Strand = Minus / Plus Query: 2340 TGCGCTAGAAC--CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCA 2283 TG GCTA A C CA C T TCATC TC TC TCTTCTTCTTC TCTTC T TTCTTC Sbjct: 100 TGAGCTACATCTTCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCT 159 Query: 2282 TCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTC 2223 TCTTC TC TC TC TC TC TCTTC TCTTC TC TCTTC TC TCTTC TTCTT TTC Sbjct: 160 TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TTCTTCTTC 218 Query: 2222 TTGCTTTTTTCAGCCTT-GACAACTCCCTTTTT-TGC-T-GCATCAGGCTTTCCTTTAGC 2167 TT CTTTTTT TT GA AAC TTT T TG T GC C GGCT TCCT A C Sbjct: 219 TT-CTTTTTTGGTTTTTTGA-AACAGGGTTTCTCTGTATAGCC-CTGGCTGTCCTGGAAC 275 Query: 2166 TCGATATGCAG 2156 TC T TG AG Sbjct: 276 TCACTCTGTAG 286 >Z97055 Human DNA sequence from PAC 388M5 on chromosome 22. Length = 177,568 Minus Strand HSPs: Score = 383 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07 Identities = 119/161 (73%), Positives = 119/161 (73%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 C ACT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC T Sbjct: 166757 CCACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 166816 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCT-CTTCCTTCTTTTTCTTGCTT-TT-TT 2213 C TC TCCTCTTC TCTTC TC TCTTCCT CT CTTCCTTCTT TTCTT CTT TT TT Sbjct: 166817 CTTCTTCCTCTTCCTCTTCTTCTTCTTCCTTCTTCTTCCTTCTTCTTCTT-CTTCTTCTT 166875 Query: 2212 CAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTT 2171 C C T C CT C T TT T CT C TC CTT T CTT Sbjct: 166876 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT-CTTCTTCTT 166917 Score = 353 (53.0 bits), Expect = 9.1e-06, P = 9.1e-06 Identities = 123/183 (67%), Positives = 123/183 (67%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC C C TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 166748 CTTCTTCCTCCACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 166807 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCT 2207 C TC TCTTC TCTTCCTC TC TC TC TCTTC T CTT TTCTT CTT TT C C T Sbjct: 166808 CTTCTTCTTCTTCTTCCTCTTCCTCTTCTTCTTCTTCCTTCTTCTTCCTTCTT-CTTCTT 166866 Query: 2206 TGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGCAATATCC 2148 C CT C T TT T CT C TC CTT T CTT CT T T C C T T C Sbjct: 166867 CTTCTTCTTCTTCTTCTTCTTCTTCTT-CTTCTTCTTCTTCTTCTTCTTCTTCCTTCTTC 166925 Query: 2147 TTCC 2144 TTCC Sbjct: 166926 TTCC 166929 Score = 348 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 110/149 (73%), Positives = 110/149 (73%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 166855 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 166914 Query: 2266 CATCCT-CTTCATC-TTCCTCATC-TTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTC 2212 C TCCT CTTC TC TTC TC TC TTC TC TCTTC TTCTT TTCTT CTT TT TTC Sbjct: 166915 CTTCCTTCTTCTTCCTTCTTCTTCCTTCTTCTTCTTCTTTCTTCTTCTTTCTTCTTCTTC 166974 Query: 2211 AGCCTTGACAACTC-CCTTTTTTGCTGCAT 2183 CTT TC CCTT TTT CT C T Sbjct: 166975 TTTCTTCTTCTTTCTCCTTCTTT-CTTCTT 167003 Score = 318 (47.7 bits), Expect = 0.00036, P = 0.00036 Identities = 114/156 (73%), Positives = 114/156 (73%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATC-TTCATCTTC-TTCATCTTCCTCCTCCTC 2269 CTT TTC TC TC TC TCTTCTTCTTC TC TTC TCTTC TTC TCTTCCT CT CT Sbjct: 166888 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTTCTTCCTTCTTCTTCCTTCTTCTT 166947 Query: 2268 CT-CATCCT-CTTCAT-CTTCCTCATCTTCCTCCT-CTTCCTTCTT-TTTCTTGCTTTTT 2214 CT C T CT CTTC T CTTC TC TCTT CT CT CTT CT CTT TTTCTT CTTT T Sbjct: 166948 CTTCTTTCTTCTTCTTTCTTCTTCTTCTTTCTTCTTCTTTCTCCTTCTTTCTT-CTTTCT 167006 Query: 2213 TCAGCCT-TGACA-ACTCCCTTTTTTGCTGCATCAGGCT 2177 TC C T TGA A TC T T TG TGC CAGGCT Sbjct: 167007 TCTTCTTCTGATGGAGTCT-TGCTCTGTTGCC-CAGGCT 167043 >U53810 Toxoplasma gondii GAA trinucleotide repeat region BS. Length = 800 Plus Strand HSPs: Score = 367 (55.1 bits), Expect = 4.3e-07, P = 4.3e-07 Identities = 139/204 (68%), Positives = 139/204 (68%), Strand = Plus / Plus Query: 2129 TCCTCC-CTTTGCTTTGGAAG-GATATT-GCTGCATATCGAGCTAAAGGA-AAGCCTGAT 2184 TCCT C CTTTGC GA G GA A G G A A AG AAG A AAG GA Sbjct: 165 TCCTTCTCTTTGCAGAAGACGAGAGACAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-GAA 223 Query: 2185 GCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAAAGAAG--GAAGAGGA 2240 G AG A AA A G AG G A G GAA AA AAG AAGAA AAGAAG GAAGA GA Sbjct: 224 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGA 282 Query: 2241 GGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGA 2300 GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGAAGA GAAGA GA Sbjct: 283 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 342 Query: 2301 AGAAGAAGATGATGATGATGAATAAG 2326 AGAAGAAGA GA GA GA GAA AAG Sbjct: 343 AGAAGAAGAAGAAGAAGAAGAAGAAG 368 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 216 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 273 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 274 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 332 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 333 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 371 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 219 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 276 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 277 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 335 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 336 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 374 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 222 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 279 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 280 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 338 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 339 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 377 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 225 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 282 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 283 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 341 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 342 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 380 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 228 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 285 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 286 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 344 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 345 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 383 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 231 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 288 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 289 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 347 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 348 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 386 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 234 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 291 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 292 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 350 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 351 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 389 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 237 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 294 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 295 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 353 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 354 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 392 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 240 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 297 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 298 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 356 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 357 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 395 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 243 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 300 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 301 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 359 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 360 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 398 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 246 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 303 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 304 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 362 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 363 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 401 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 249 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 306 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 307 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 365 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 366 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 404 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 252 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 309 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 310 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 368 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 369 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 407 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 255 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 312 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 313 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 371 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 372 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 410 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 258 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 315 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 316 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 374 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 375 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 413 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 261 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 318 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 319 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 377 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 378 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 416 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 264 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 321 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 322 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 380 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 381 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 419 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 267 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 324 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 325 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 383 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 384 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 422 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 270 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 327 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 328 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 386 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 387 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 425 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 273 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 330 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 331 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 389 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 390 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 428 Score = 363 (54.5 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 115/156 (73%), Positives = 115/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 279 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 336 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 337 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 395 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 396 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAG 434 Score = 355 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06 Identities = 119/167 (71%), Positives = 119/167 (71%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 318 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 375 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA AAG Sbjct: 376 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAG 434 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGC 2337 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG TTC A C Sbjct: 435 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAGTCTTCCATC 484 Score = 354 (53.1 bits), Expect = 1.9e-06, P = 1.9e-06 Identities = 114/156 (73%), Positives = 114/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 285 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 342 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 343 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 401 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA A GAA AAG Sbjct: 402 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAG 440 Score = 354 (53.1 bits), Expect = 1.9e-06, P = 1.9e-06 Identities = 114/156 (73%), Positives = 114/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 288 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 345 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 346 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 404 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA A GA GAA AAG Sbjct: 405 AAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAG 443 Score = 354 (53.1 bits), Expect = 1.9e-06, P = 1.9e-06 Identities = 114/156 (73%), Positives = 114/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 291 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 348 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 349 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 407 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA A GA GA GAA AAG Sbjct: 408 AAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAG 446 Score = 354 (53.1 bits), Expect = 1.9e-06, P = 1.9e-06 Identities = 114/156 (73%), Positives = 114/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 306 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 363 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 364 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 422 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAA A GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 423 AAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 461 Score = 354 (53.1 bits), Expect = 1.9e-06, P = 1.9e-06 Identities = 114/156 (73%), Positives = 114/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 309 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 366 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 367 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 425 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA AAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 426 AAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 464 Score = 354 (53.1 bits), Expect = 1.9e-06, P = 1.9e-06 Identities = 114/156 (73%), Positives = 114/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 312 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 369 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 370 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 428 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AA A GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 429 AAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 467 >Z68332 Human DNA sequence from cosmid V775G11, between markers Length = 26,568 Minus Strand HSPs: Score = 381 (57.2 bits), Expect = 4.7e-07, P = 4.7e-07 Identities = 163/241 (67%), Positives = 163/241 (67%), Strand = Minus / Plus Query: 2356 ACAAGAAAAAAAAAACTGCGCTAGAAC-CAACTTATTCATCATCATCATCTTCTTCTTCA 2298 A A GA A AA AAC CG T GA C ACTT TTC T TC TC TCTTCTTCTTC Sbjct: 10868 AGATGATGACAACAACGACGAT-GATGACTACTTCTTCTT--TCTTCTTCTTCTTCTTCT 10924 Query: 2297 TCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCT-CTTCATCTTCCTCATCTTCCTC 2239 TCTTC TCTTCTTC TCTTCCTC TCCTC TC TCCT CTTC TCTTC TC TCTTC TC Sbjct: 10925 TCTTCTTCTTCTTCCTCTTCCTCTTCCTCTTCTTCCTTCTTCTTCTTCTTCTTCTTCTTC 10984 Query: 2238 CTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCTTGACAACTCCCTTTTTTGCTGCAT-CAG 2180 TCTTC TTCTT TTCTT CTT TT C C TT C CT CTT TT T C T CA Sbjct: 10985 TTCTTC-TTCTTCTTCTT-CTTCTT-CTTC-TT--CTTCTTTCTTCTTCTATCCCTTCAA 11038 Query: 2179 GCTTTCCTTTAGCTCGATATGCAG-CAATATCCTTCCAAAGCA-AAGGGAGGATAAAACA 2122 GC TT TT T GA TGCA CAATA TT CA C AAG A TAAAA A Sbjct: 11039 GCATTTATTCTT-T-GAGTTGCAAACAATACAATTGCATTCCTTAAGTTATTTTAAAATA 11096 Query: 2121 GTAGGG 2116 TA GG Sbjct: 11097 -TACGG 11101 >L13238 Rattus norvegicus polymeric immunoglobulin receptor mRNA, 3' Length = 120 Plus Strand HSPs: Score = 335 (50.3 bits), Expect = 5.0e-07, P = 5.0e-07 Identities = 87/109 (79%), Positives = 87/109 (79%), Strand = Plus / Plus Query: 2217 AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGA 2276 AAG AAGAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA Sbjct: 2 AAG-AAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 59 Query: 2277 GGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AA Sbjct: 60 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAA 108 Score = 332 (49.8 bits), Expect = 6.9e-07, P = 6.9e-07 Identities = 88/112 (78%), Positives = 88/112 (78%), Strand = Plus / Plus Query: 2214 AAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGA 2273 AA AAG AAGAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA Sbjct: 2 AAGAAG-AAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 59 Query: 2274 GGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA AA AA Sbjct: 60 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAA 111 Score = 325 (48.8 bits), Expect = 1.4e-06, P = 1.4e-06 Identities = 83/104 (79%), Positives = 83/104 (79%), Strand = Plus / Plus Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA Sbjct: 1 GAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 59 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 60 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 103 Score = 314 (47.1 bits), Expect = 4.5e-06, P = 4.5e-06 Identities = 86/112 (76%), Positives = 86/112 (76%), Strand = Plus / Plus Query: 2214 AAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGA 2273 AA AAG AAGAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA Sbjct: 8 AAGAAG-AAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 65 Query: 2274 GGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA A A AA AA Sbjct: 66 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAAAAA 117 >AB001489 Mus musculus DNA for polyimmunoglobulin receptor, complete cds. Length = 29,392 Plus Strand HSPs: Score = 380 (57.0 bits), Expect = 5.2e-07, P = 5.2e-07 Identities = 118/162 (72%), Positives = 118/162 (72%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAG 2223 GAG AAGGA AAG GA G AG A AA A G AG G A G GAA AA G AAG Sbjct: 28551 GAGAAGAAGGAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-G-AAG 28607 Query: 2224 AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 AA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GATGA GA GA GA GAAGA Sbjct: 28608 AAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAAGAA 28666 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 28667 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 28709 Score = 374 (56.1 bits), Expect = 9.8e-07, P = 9.8e-07 Identities = 110/142 (77%), Positives = 110/142 (77%), Strand = Plus / Plus Query: 2185 GCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC-AAG-AAAAA-GAAGGAAGAGGAG 2241 GCAG AA A GGAGT G AAGG GAA AA G AAG AAAAA GAAG AAGAGGAG Sbjct: 28475 GCAGGAAGAGGAGGAGTAGA-AAGGGGGAAGAAGGAGAAGGAAAAAAGAAG-AAGAGGAG 28532 Query: 2242 GAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAA 2301 GAAGA GAGGA GA GA GAG A AGGAG AG AG AAGA GAAGAAGA GAAGA GAA Sbjct: 28533 GAAGAGGAGGAGGAGGAGGAGAAGAAGGAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAA 28591 Query: 2302 GAAGAAGATGATGATGATGAATAAG 2326 GAAGAAGA GA GA GA GAA AAG Sbjct: 28592 GAAGAAGAAGAAGAAGAAGAAGAAG 28616 Score = 372 (55.8 bits), Expect = 1.2e-06, P = 1.2e-06 Identities = 116/156 (74%), Positives = 116/156 (74%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 28563 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 28620 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGATGAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 28621 AGAAG-AAGAAGAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 28679 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 28680 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 28718 Score = 372 (55.8 bits), Expect = 1.2e-06, P = 1.2e-06 Identities = 116/156 (74%), Positives = 116/156 (74%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 28572 AAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 28629 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGATGA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 28630 AGAAG-AAGAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 28688 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 28689 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 28727 Score = 366 (54.9 bits), Expect = 2.3e-06, P = 2.3e-06 Identities = 116/156 (74%), Positives = 116/156 (74%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A AG GA G AG A A GGAG G AAGG GAA AA AAG AAGAA A Sbjct: 28522 AAGAAGAGGAGGAAG-AGGAGGAGGAGGAGGAGAAGAAGGA-GAAGAAGAAG-AAGAAGA 28578 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 28579 AGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 28637 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGATGAAGAAGAAGA GA GA GA GAA AAG Sbjct: 28638 AAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAG 28676 Score = 321 (48.2 bits), Expect = 0.00026, P = 0.00026 Identities = 113/157 (71%), Positives = 113/157 (71%), Strand = Plus / Plus Query: 2173 GGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAG 2232 GG AAG GA G AG AAAAAAG AG G AGG GAA A G A GA A GA G Sbjct: 28499 GGGAAGAAGGA-GAAGGAAAAAAGA-AGAAG---AGGAGGAAGAG-G-AGGAGGAGGAGG 28551 Query: 2233 -GAAGA-GGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 GAAGA GGAG AAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGAAG Sbjct: 28552 AGAAGAAGGAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 28610 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 A GAAGA GAAGAAGAAGA GA GA GA GAA AAG TG Sbjct: 28611 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATG 28649 >X53858 Rat TTF-1 mRNA for thyroid nuclear factor 1 Length = 2326 Minus Strand HSPs: Score = 377 (56.6 bits), Expect = 5.3e-07, P = 5.3e-07 Identities = 115/155 (74%), Positives = 115/155 (74%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TCCT CT CT Sbjct: 1420 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TCCTTCTTCT 1478 Query: 2266 CATCCT-CTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCC 2208 T CT CTTC TCTTC TC TCTTC TCCTC TCCT CTT TTC T CTTTTT C CC Sbjct: 1479 TTTTCTGCTTCTTCTTCTTCCTCTTCTTCCTCCTCCTCCTTCTTCCTCCTTTTT-CT-CC 1536 Query: 2207 TTGACAACTC-CCTTTTTTGCTGCATCAGGCTTTCCT 2172 TTG C C C CCT TTT CT TC TTTCCT Sbjct: 1537 TTGTCCCCACTCCTCCTTTTCTCTTTCTCCTTTTCCT 1573 Score = 352 (52.8 bits), Expect = 7.5e-06, P = 7.5e-06 Identities = 130/183 (71%), Positives = 130/183 (71%), Strand = Minus / Plus Query: 2353 AGAAAAAA-AAAACTGCGCTAGAACCAA-CTTATTCATCATCATCATCTTCTTCTTCAT- 2297 AGA AA AAAA T C C A ACCAA CT T A C TC TC TCTTCTTCTTC T Sbjct: 1229 AGACCAAGGAAAAGTACACAAAGACCAAACTGCTGGA-CTTCTTCTTCTTCTTCTTCTTT 1287 Query: 2296 CTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCT 2237 CTTC TCTTCTTC TCTTC TC TC TC TC TC TCTTC TCTTC TC TCTTC TC T Sbjct: 1288 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 1347 Query: 2236 CTTCCTTCTTTTTCTTGCTTTTTTCAGCCT-TGACAACTCCCTTTTTTGCTGCATCAGGC 2178 CTTC TTCTT TTCTT CTT TT C C T TG C CT C T TGCTGC C G C Sbjct: 1348 CTTC-TTCTTCTTCTT-CTTCTT-CTTCTTCTG-CTGCTGCTGCTGCTGCTGCTGCTG-C 1402 Query: 2177 TT-TCCTT 2171 TT T CTT Sbjct: 1403 TTCTTCTT 1410 Score = 351 (52.7 bits), Expect = 8.3e-06, P = 8.3e-06 Identities = 117/160 (73%), Positives = 117/160 (73%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TCCT Sbjct: 1414 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TCCT 1472 Query: 2266 -CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTT-T--TTCTTGCT--TTTTT 2213 C TC T TTC CTTC TC TCTTCCTC TCTTCCT CT T TTCTT CT TTTTT Sbjct: 1473 TCTTCTTTTTCTGCTTCTTCTTCTTCCTCTTCTTCCTCCTCCTCCTTCTTCCTCCTTTTT 1532 Query: 2212 CAGCCTTGACAACTC-CCTTTTTTGCTGCATCAGGCTTTCCT 2172 C CCTTG C C C CCT TTT CT TC TTTCCT Sbjct: 1533 CT-CCTTGTCCCCACTCCTCCTTTTCTCTTTCTCCTTTTCCT 1573 Score = 323 (48.5 bits), Expect = 0.00016, P = 0.00016 Identities = 117/164 (71%), Positives = 117/164 (71%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTC--CTCCTCCTC 2269 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCT CT C CT C CT CT CT Sbjct: 1339 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTGCTGCTGCTGCTGCTGCTG 1398 Query: 2268 CT-CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTC 2212 CT C TC TCTTC TCTTC TC TCTTC TC TCTTC TTCTT TTCTT CTT TT TTC Sbjct: 1399 CTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TTCTTCTTCTT-CTTCTTCTTC 1456 Query: 2211 AGCCTTGACAACTCC--CTT-TTTTGCTGCATCAGGCT-TTCCTTT 2170 C T C CTCC CTT TTTT CTGC TC T TTCCT T Sbjct: 1457 TTCTTCTTCTTCTCCTTCTTCTTTTTCTGCTTCTTCTTCTTCCTCT 1502 Score = 320 (48.0 bits), Expect = 0.00022, P = 0.00022 Identities = 130/192 (67%), Positives = 130/192 (67%), Strand = Minus / Plus Query: 2359 TAGACAAGAAAAAAAAAACTGCGCTAGAACCAACTTATTCATCAT-CATCATCTTCTTCT 2301 TA ACAA A AAA CTG CT C CTT TTC TC T C TC TCTTCTTCT Sbjct: 1243 TACACAAAGACCAAACTGCTGGACTTCTTCTT-CTTCTTCTTCTTTCTTCTTCTTCTTCT 1301 Query: 2300 TCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCC 2241 TC TCTTC TCTTCTTC TCTTC TC TC TC TC TC TCTTC TCTTC TC TCTTC Sbjct: 1302 TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 1361 Query: 2240 TCCTCTTCCTTCTTTTTCT--TGCTTTTT-T-CAGCCT-TGACAACTCCCTTTTTTGCTG 2186 TC TCTTC TTCTT T CT TGCT T T C GC TG C CT C T TT T CT Sbjct: 1362 TCTTCTTC-TTCTTCTGCTGCTGCTGCTGCTGCTGCTGCTG-CTTCTTCTTCTTCTTCTT 1419 Query: 2185 CATCAGGCTT-TCCTT 2171 C TC CTT T CTT Sbjct: 1420 CTTCTT-CTTCTTCTT 1434 Score = 310 (46.5 bits), Expect = 0.00064, P = 0.00064 Identities = 92/124 (74%), Positives = 92/124 (74%), Strand = Minus / Plus Query: 2341 CTGC-GCTAGAACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCA 2283 CTGC GCT G C CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC Sbjct: 1390 CTGCTGCT-GCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 1448 Query: 2282 TCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTC 2223 TCTTC TC TC TC TC TC CTTC TCTT TC CTTC TC TCTTCCT CTT TTC Sbjct: 1449 TCTTCTTCTTCTTCTTCTTCTCCTTCTTCTTTTTCTGCTTCTTCTTCTTCCT-CTTCTTC 1507 Query: 2222 TTGCT 2218 T CT Sbjct: 1508 CTCCT 1512 Score = 310 (46.5 bits), Expect = 0.00064, P = 0.00064 Identities = 124/183 (67%), Positives = 124/183 (67%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC T CT CT Sbjct: 1324 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TGCTGCT 1382 Query: 2266 CATCCT-CTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCC 2208 T CT CT C CT C C TCTTC TC TCTTC TTCTT TTCTT CTT TT C C Sbjct: 1383 GCTGCTGCTGCTGCTGCTGCTTCTTCTTCTTCTTC-TTCTTCTTCTT-CTTCTT-CTTC- 1438 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGCAATATC 2149 TT C CT C T TT T CT C TC CTT TCCTT CT T TGC C T T Sbjct: 1439 TT--CTTCTTCTTCTTCTTCTTCTTCTT-CTTCTCCTTCTTCTTTTTCTGCTTCT-TCTT 1494 Query: 2148 CTTCC 2144 CTTCC Sbjct: 1495 CTTCC 1499 Score = 298 (44.7 bits), Expect = 0.0023, P = 0.0023 Identities = 112/165 (67%), Positives = 112/165 (67%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 1306 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 1365 Query: 2266 CATCCTCTTCATCTTCCTCATCTTC--CTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCA 2211 C TC TCTTC CT C C CT C CT CT T CTTCTT TTCTT CTT TT TTC Sbjct: 1366 CTTCTTCTTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCTTCTTCTT-CTTCTTCTTCT 1424 Query: 2210 GCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTC 2165 C T C CT C T TT T CT C TC CTT T CTT CTC Sbjct: 1425 TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT-CTTCTTCTTCTTCTC 1470 Score = 295 (44.3 bits), Expect = 0.0031, P = 0.0031 Identities = 109/159 (68%), Positives = 109/159 (68%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 1303 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 1362 Query: 2266 CATCCTCTTCATCTTCCTCATCTTC--CTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCA 2211 C TC TCTTC TCT C C CT C CT CT T CT CTT TTCTT CTT TT TTC Sbjct: 1363 CTTCTTCTTCTTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCTTCTT-CTTCTTCTTCT 1421 Query: 2210 GCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTT 2171 C T C CT C T TT T CT C TC CTT T CTT Sbjct: 1422 TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT-CTTCTTCTT 1461 >Z29356 Gallus domesticus of h71t7 gene encoding G.domesticus expressed sequence Length = 237 Plus Strand HSPs: Score = 326 (48.9 bits), Expect = 6.5e-07, P = 6.5e-07 Identities = 74/85 (87%), Positives = 74/85 (87%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60 ||||||||||| ||||| |||||||||||||| |||||||| ||||| || || |||||| Sbjct: 153 ATGGGCAAAGGTGATCCCAAGAAGCCGAGAGGTAAAATGTCTTCATACGCCTTCTTTGTG 212 Query: 61 CAAACTTGTCGGGAGGAGCATAAGA 85 ||||| || ||| ||||||| |||| Sbjct: 213 CAAACCTGCCGGCAGGAGCACAAGA 237 >AL021127 Mus musculus cosmid CMX137 containing part of Nsdhl Length = 43,369 Minus Strand HSPs: Score = 377 (56.6 bits), Expect = 7.2e-07, P = 7.2e-07 Identities = 125/168 (74%), Positives = 125/168 (74%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCT CCTCCTCCTCCT Sbjct: 22034 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT-CCTCCTCCTCCT 22092 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTT-TTCTTGCTTTTTTCAGCC 2208 C TCCTC TC TCTTCCTC TC TCCTCCTC TCCTT TTT TTCTT TT T CAG Sbjct: 22093 CCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTTTTTTATTCTT--TTGATACAGGG 22150 Query: 2207 T-TGAC-A-ACTCCCTTTTTTGCTGCAT-C-AGGCTTTCCTTTAGCTCGATA 2161 T T AC A AC CCT T TG A C AG CT C TT A CTC ATA Sbjct: 22151 TCTCACTATACATCCTAATGCTATGTAGACTAGTCTGACTTTGAACTC-ATA 22201 Score = 347 (52.1 bits), Expect = 1.7e-05, P = 1.7e-05 Identities = 197/302 (65%), Positives = 197/302 (65%), Strand = Minus / Plus Query: 2471 AACTATA-CAAAAAAAGACACTGTACAGTTTAAAAACAAATCTTACACAGC--CTTACAT 2415 AA ATA CAAAAAAA A A T ACA AA AACAAA C ACA AG CT A T Sbjct: 21836 AAGAATAACAAAAAAATA-A-TA-ACAAC--AACAACAAAACC-ACAAAGTGACTCAAGT 21889 Query: 2414 TTCAATTTTTTT-CTTTAA-AAGGAGTGAGTTGTGTACAGGGGGGTTA--AATGC-TTTA 2360 TTCA TT T C TAA AA AGT A T T T CA G G TT AAT C TTT Sbjct: 21890 TTCAGCTTATAGACCATAACAACAAGTAATAT-TCTCCAAGCTGTTTCTCAATACCTTTG 21948 Query: 2359 T-AGACAAGAAAAAAAAAACTGCGCTAGAACCAACTTATTCATCATCATCATCTTCTTCT 2301 T A A AA AAAA A ACTG GCT G CA AT C TC TC TC TCTTCTTCT Sbjct: 21949 TTATAGAAATAAAATCACACTGTGCT-GT--CATGG-AT-C-TCTTCTTCTTCTTCTTCT 22002 Query: 2300 TCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCC 2241 TC T TTC TCTT TTC TCTT TC TC TC TC TC TCTTC TCTTC TC TCTTC Sbjct: 22003 TCTTTTTCTTCTTTTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 22062 Query: 2240 TCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCCTTGACAACTCCCTTTTTTGCTGCATC 2182 TC TCTTC TTCTT TTCT CT T TC CCT C CTCC TT T CT C TC Sbjct: 22063 TCTTCTTC-TTCTTCTTCTC-CTCCTCCTCCTCCTCCTC--CTCCTCTTCCTCCTCC-TC 22117 Query: 2181 AGGCTT-TCCTTT 2170 CT TCCTTT Sbjct: 22118 CTCCTCCTCCTTT 22130 Score = 222 (33.3 bits), Expect = 8.3, P = 1.0 Identities = 130/197 (65%), Positives = 130/197 (65%), Strand = Minus / Plus Query: 2322 TTCATCATCATCATCTTC-TTC-TTCATCTTCATCTT-CTTCATCTTCCTCCTCCTCCT- 2267 TTC TC TC T CTTC TTC TTC T TT TCTT CTT T TTCCT CT TC T Sbjct: 33478 TTCTTCTTCCTTC-CTTCCTTCCTTCCTTTTTTTCTTTCTTTCT-TTCCTTCTT-TCTTT 33534 Query: 2266 CATCCTCTTCATC-TTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCC 2208 C T CT TTC TC TTCCT CTTCCT T T TTCTTTTTCTT CTTTT T AG C Sbjct: 33535 CTTTCT-TTCTTCCTTCCTTC-CTTCCTTTTATCTTTTCTTTTTCTTTCTTTTGT-AGTC 33591 Query: 2207 T-TGACAACTCCC-TTTTTTGCTGCAT-CAGGCTTTCCTTTAGC-TCGATATGCA-GCAA 2153 T T A C TTTTTTG TGCA C GGCTT CT T C TC AT TG A G A Sbjct: 33592 TATCATTTTGATCATTTTTTG-TGCACACTGGCTTAACTCTCTCCTCTAT-TGAAAGGAC 33649 Query: 2152 TATCCTTCCAAAGCAAAGGGAGGATAA 2126 T TC T A CA AG GAGG T A Sbjct: 33650 T-TCTCTG-ACCTCACAGTGAGGGTTA 33674 >L81783 Homo sapiens (subclone 9_d11 from P1 H26) DNA sequence, complete Length = 2998 Plus Strand HSPs: Score = 373 (56.0 bits), Expect = 8.8e-07, P = 8.8e-07 Identities = 269/428 (62%), Positives = 269/428 (62%), Strand = Plus / Plus Query: 1909 ATAACTTTGCAAATATTAGACTATGCCATTTCATGAG-TTATA-GATTGTTATAATGAT- 1965 AT CTTT CA AT TT T GCC TTT GAG TT TA GA TG AT A G T Sbjct: 619 ATCTCTTTCCACATCTTCCTTTCAGCCGTTTGG-GAGGTTCTAAGACTGGAATTACGGTG 677 Query: 1966 CTTGTATTTTT-ATGTTCA--TTTATTGA--AGT-TCTAG-TTATT-TCTGGAGTTGCTG 2017 CT G ATT T A T A TTTA TGA AGT T T TTATT T TGG TT TG Sbjct: 678 CTAG-ATTAGTGAACATGACCTTTAATGAGTAGTCTTTCCCTTATTCTTTGGGATTT-TG 735 Query: 2018 TGGATCTACAGATACGTGATATTTTGGT-ATAACTA-GAATCTTGATTTCTTTCATAAAG 2075 A CT G A TGA A TTGGT A T G A CT GATT T CA A A Sbjct: 736 ACTACCTTTTGTCAGATGAAAAATTGGTGAGTTTTGTGTAGCT-GATTGGATGCAAATAA 794 Query: 2076 TTCTGCCATGTTCTATTTCTTTCCTTA-AT-CTTTTTTT-C-TTCCCTACTGTTTTATCC 2131 T CTG AT TTC TT TT C A AT CTT TT C TT TAC TT T Sbjct: 795 TGCTG--AT-TTCACATT-TTAGCAAAGATGCTTGTTAAACATTTGGTACGAAATTGTGT 850 Query: 2132 TCCCTTTGCTTTGGAAGGATATTGCTGCATATCGA-GCTAAAGGA-AAGCCTGATGCAGC 2189 T TTT CT G AA A A T CT AT T GA GC AAAG A AAG GA G AG Sbjct: 851 TG--TTT-CTAAGTAATTAAAAT-CT--ATTTAGAAGCCAAAGAAGAAGAA-GAGGAAG- 902 Query: 2190 AAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGA 2249 A AAAG AG G AGG GA AA G AAGAA AAGAAG AAGA GA GAAGA GA Sbjct: 903 AGGAAAGA-AGAAGAAGAGGAAGAGGAA-G-AAGAAGAAGAAG-AAGAAGAAGAAGAAGA 958 Query: 2250 GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGA 2309 GAAGA GAAGA GA GA GA GA GA GAAGA AAGAAGA GAAGA GAAGA GAAGA Sbjct: 959 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-AAGAAGAAGAAGAAGAAGAGGAAGA 1017 Query: 2310 TGATGA-TGATGAA-TAAGTTGGTTCTAG 2336 GA GA TG G A TA GTTG TT AG Sbjct: 1018 AGAAGAATGCAGCAGTAGGTTGTTTACAG 1046 Score = 343 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05 Identities = 87/106 (82%), Positives = 87/106 (82%), Strand = Plus / Plus Query: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAG-GAAGATGAAGAGGATGAGGAGGAGGAGGA 2279 AAG AAAGAAG AAGA GAGGAAGA GA GAAGA GAAGAGGA GAGGA GA GA GA Sbjct: 879 AAGCCAAAGAAG-AAGAAGAGGAAGAGGAAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGA 937 Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 938 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 984 Score = 326 (48.9 bits), Expect = 0.00013, P = 0.00013 Identities = 92/112 (82%), Positives = 92/112 (82%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAGAAGGAAGAGGA--G--GAAGATGAGGAAGATGAAGAGGATGAGGAG 2271 AAAG AAGAA AAGA GGAAGAGGA G GAAGA GAGGAAGA GAAGA GA GA GA Sbjct: 884 AAAG-AAGAAGAAGA-GGAAGAGGAAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAA 941 Query: 2272 GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 942 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-AAG 995 >Y11666 M.musculus gene encoding hexokinase II, exon 1 (and joined CDS) Length = 6151 Minus Strand HSPs: Score = 374 (56.1 bits), Expect = 9.0e-07, P = 9.0e-07 Identities = 140/196 (71%), Positives = 140/196 (71%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCAT-CTTCCTCCTCCTCC 2268 CTT TTC TC TC TC TCTTCTTCTTC TCT C TCTTCTTC T CTTC TCCT CTCC Sbjct: 2676 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTTCTTCCTTCTTC-TCCTTCTCC 2734 Query: 2267 TCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTT--CTTGCTTTT-TTCA 2211 TC TCCTCTTC TC CCTC TC TCCTCCTC TCCTTCTT TT C G TTT TT A Sbjct: 2735 TCCTCCTCTTCCTCC-CCTCTTCCTCCTCCTCCTCCTTCTTCTTGACAGGGTTTCGTTGA 2793 Query: 2210 GC--CT-TGACAACTCC-CTTTTTTGCTGCATCAGGCTTTCCTTTAGCTC---GATATGC 2158 G CT T CAA TC CTT TTG T A CA GCT CCT AGCTC GATATGC Sbjct: 2794 GTATCTCTTCCAAGTCTACTTGCTTGGTAAACCAAGCTGGCCTGGAGCTCAAAGATATGC 2853 Query: 2157 A-GCAATATCCTTCCAAAG 2140 GC T T C TCC AAG Sbjct: 2854 CTGCC-TCTGCCTCCCAAG 2871 Score = 357 (53.6 bits), Expect = 5.4e-06, P = 5.4e-06 Identities = 143/208 (68%), Positives = 143/208 (68%), Strand = Minus / Plus Query: 2339 GCGCTAGAACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCT 2280 GC CTA AAC AACT T C TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCT Sbjct: 2622 GCTCTAAAAC-AACTACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 2680 Query: 2279 TCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTG 2220 TC TC TC TC TC TC TCTTC TCT C TC TCTTCCT CT TCCTTCT T CT Sbjct: 2681 TCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTTCTTCCTTCTTCTCCTTCTCCTCCTC- 2739 Query: 2219 CTTTTT-TCAGC-CTTGA--CAACTCC-CTTTTTTGCTGCATCAGGCTTTCCTTTAGC-T 2166 CT TT TC C CTT C CTCC C TT TT TG A CAGG TTTC TT AG T Sbjct: 2740 CTCTTCCTCCCCTCTTCCTCCTCCTCCTCCTTCTTCTTG-A-CAGGGTTTCGTTGAGTAT 2797 Query: 2165 CGATATGCA-G-CAATATCCTTCCAAAGCAAAG 2135 C T T CA G C A T CTT AA C AAG Sbjct: 2798 CTCT-TCCAAGTCTACTTGCTTGGTAAACCAAG 2829 Score = 297 (44.6 bits), Expect = 0.0030, P = 0.0030 Identities = 99/135 (73%), Positives = 99/135 (73%), Strand = Minus / Plus Query: 2351 AAAAAAAAAACTGCG-CTAGAACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTC 2293 AAAA AA ACT C CT C CTT TTC TC TC TC TCTTCTTCTTC TCTTC Sbjct: 2627 AAAACAACTACTACTTCTTCTTCTT-CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 2685 Query: 2292 ATCTTCTTCATCTTCCTCCTCCTCCT-CATCCTC-TTCATCTTCCTCATCTTCCTCCTCT 2235 TCTTCTTC TCTTC TC TC TCCT C TC TC TTC TCT C TC TC TCCTCCTCT Sbjct: 2686 TTCTTCTTCTTCTTCTTCTTC-TCCTTCTTCTTCCTTCTTCTCCTTC-TCCTCCTCCTCT 2743 Query: 2234 TCCTTCTTT-TTCTTGCT 2218 TCCT C T TTC T CT Sbjct: 2744 TCCTCCCCTCTTCCTCCT 2761 >M55020;M37081 Rat nucleolin gene. Length = 4204 Plus Strand HSPs: Score = 372 (55.8 bits), Expect = 1.1e-06, P = 1.1e-06 Identities = 102/135 (75%), Positives = 102/135 (75%), Strand = Plus / Plus Query: 2210 CTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG 2269 CTG AAA CAAGA G GA GAGGAGGAAGATGA GA GATGA GA GATGA G Sbjct: 71 CTGTGAAAGCCAAGAGTGTGGCCGAGGAGGAGGAAGATGATGAGGATGATGAAGATGAAG 130 Query: 2270 AGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 AGGAGGA GAAGATGAAGAAGATGAAGA GA GA GAAGATGA GATGA GAA AAG G Sbjct: 131 AGGAGGATGAAGATGAAGAAGATGAAGAGGACGATGAAGATGAGGATGAGGAAGAAGAGG 190 Query: 2330 GTTCTAGCGCAGTTT 2344 TA C CAG TT Sbjct: 191 AAGGTAAC-CAGATT 204 Score = 326 (48.9 bits), Expect = 0.00013, P = 0.00013 Identities = 128/189 (67%), Positives = 128/189 (67%), Strand = Plus / Plus Query: 2140 CTTTGGAAGGATAT-TGCTGCAT-AT-CGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAG 2196 CT GGAAG A T TG G AT A C AGC AAAGGAAAG T C GCAAAA Sbjct: 8 CTGAGGAAGAAGTTATGGAG-ATCACACCAGCCAAAGGAAAGAAAACTCCTGCAAAAGTT 66 Query: 2197 GGAGTTGTCAAGGCTGAAAAAA-GCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGA 2255 G TGT AA GC A A G GA A GA GGAAGA GA GA GATGA GAAGA Sbjct: 67 GTTCCTGTGAAAGCCAAGAGTGTGGCCGAGGAGGA-GGAAGATGATGAGGATGATGAAGA 125 Query: 2256 TGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 TGAAGAGGA GA GA GA GA GAAGATGAAGA G GA GATGAAGA GA GATGA GA Sbjct: 126 TGAAGAGGAGGATGAAGATGAAGAAGATGAAGA-G--GACGATGAAGATGAGGATGAGGA 182 Query: 2316 TGATGAATAAGTT 2328 GA GA AAG T Sbjct: 183 AGAAGAGGAAGGT 195 Score = 257 (38.6 bits), Expect = 0.19, P = 0.17 Identities = 99/150 (66%), Positives = 99/150 (66%), Strand = Plus / Plus Query: 2180 CTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGG 2239 CTGA G AG AA A GGAG T CA C G AAA G AAGAAAA G A A G Sbjct: 8 CTGAGGAAG-AAGTTATGGAGATCACAC--CAGCCAAAGGAAAGAAAACTCCTGCAAAAG 64 Query: 2240 AGGAAGATGAGGAAGATGAAGAGGATGAG-GAGGAGGAGGAAGATGAAGAAGATGAAGAT 2298 G TG G AAG AAGAG TG GAGGAGGAGGAAGATGA GA GATGA GA Sbjct: 65 TTGTTCCTGTGAAAGCC-AAGAGTGTGGCCGAGGAGGAGGAAGATGATGAGGATGATGAA 123 Query: 2299 GAAGAAGAAGATGATGATGATGAATAAGTTG 2329 GA GAAGA GA GATGA GATGAA AAG TG Sbjct: 124 GATGAAGAGGAGGATGAAGATGAAGAAGATG 154 >D78176 Mouse DNA for primary transcript of atrial natriuretic clearance Length = 2384 Plus Strand HSPs: Score = 369 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06 Identities = 117/156 (75%), Positives = 117/156 (75%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAA-AAGC-AAGAAAA 2227 AAGGA AAG GA G AG AAA A GGAG G AAGG GAA A AAG AAGAAA Sbjct: 334 AAGGAGAAGGA-GAAGGAGAAAAGGAAGGAGGAG--AAGGA-GAAGAGAAGAGAAGAAAG 389 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 A AA GAAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAG Sbjct: 390 AAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 449 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 450 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-AAG 487 Score = 361 (54.2 bits), Expect = 2.9e-06, P = 2.9e-06 Identities = 125/171 (73%), Positives = 125/171 (73%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAA-AGG-GAGTTGTCAAGGCTGAAAAAAGCAAGAAAAA 2228 AAGGA A GA G AG A AA AG GAG G AAG GAAAAA G AAGAA AA Sbjct: 346 AAGGAGAAAAGGAAGGAGGAGAAGGAGAAGAGAAGAGAAGAAAGAAAAA-G-AAGAAGAA 403 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGA Sbjct: 404 GAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 462 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAA-TAAGT-TGGTTCTAGC-GCAG 2341 AGA GAAGA GAAGAAGAAGA A GA GA GAA TAA T TG T TA C GCAG Sbjct: 463 AGAAGAAGAAGAAGAAGAAGAAAA-GAAGAAGAAATAACTATGACT-TAACAGCAG 516 >L21696 Human (clone pHG5) prothymosin alpha gene, complete cds. Length = 333 Plus Strand HSPs: Score = 316 (47.4 bits), Expect = 1.3e-06, P = 1.3e-06 Identities = 132/195 (67%), Positives = 132/195 (67%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAGGA TTG G A A AG AA GGAA AG C G C GC AA GGGA T Sbjct: 60 GAAGGAAGTTGTGGAAGAGGCAGAAAATGGAAGAGAC-GCCCCTGCTAAC--GGGAATGC 116 Query: 2204 TCAAGGCTGAAAAA----AGCAAGAAAAAGA-AG-GAAGAGGAGGAAGATGAGGAAGATG 2257 T AA G GAAAA AGCA GAA GA AG GAAG GA GAAGA GAGGAAGA G Sbjct: 117 T-AATGAGGAAAATGGGGAGCAGGAAGCTGACAGTGAAGTAGATGAAGAAGAGGAAGAAG 175 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 G GGA GA GAGGAGGAGGAAGA GAAG GATG GA GAAGA GA G GATGA G Sbjct: 176 GTGGGGAGGAAGAGGAGGAGGAAGAAGAAGGTGATGGTGAGGAAGAGGATGGAGATGAAG 235 Query: 2318 ATGAATAAGTTGGTTCTAGC 2337 ATGA AAG TG TC AGC Sbjct: 236 ATGAGGAAGCTGAGTC-AGC 254 Score = 200 (30.0 bits), Expect = 0.25, P = 0.22 Identities = 112/187 (59%), Positives = 112/187 (59%), Strand = Plus / Plus Query: 2142 TTGGAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAG 2200 T GG AG A GCTG A A GA TA A GAA A GA G AG AGG AG Sbjct: 129 TGGGGAGCAGGAAGCTG-ACAGTGAAGTAGATGAAGAAGAGGAAGAAGGTGGGGAGGAAG 187 Query: 2201 TTGTCAAGGCTGAAAAAAGCAA-GAAAAAGAAGGAAGA-GGAG--GAAGATGAGGAAGAT 2256 G AGG GAA AA G A G A GAAG A GA GGAG GAAGATGAGGAAG T Sbjct: 188 AGGAGGAGGAAGAAGAAGGTGATGGTGAGGAAG-AGGATGGAGATGAAGATGAGGAAGCT 246 Query: 2257 GAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGAT 2316 GA G T GG AG GG AG TGAAGA GATGA GATGA GA G GAT A A Sbjct: 247 GAGTCAGCTACGGGCAAGCGGGCAGCTGAAGATGATGAGGATGACGATGTCGAT-ACCAA 305 Query: 2317 GATGAATAAG 2326 GA G A AAG Sbjct: 306 GAAGCAGAAG 315 >U95739 Human chromosome 16p11.2-p12 BAC clone CIT987SK-224D6 complete Length = 69,015 Plus Strand HSPs: Score = 371 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06 Identities = 117/157 (74%), Positives = 117/157 (74%), Strand = Plus / Plus Query: 2174 GAAAGCCTGA-TGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAG 2232 GAA CCTG TG AGCAA AG GAG C G TGAAA AAG AAGAA AAGAAG Sbjct: 5209 GAACTCCTGCCTG-AGCAATGGAGTGAGACC-CTGTG-TGAAAGAAG-AAGAAGAAGAAG 5264 Query: 2233 --GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 GAAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGAAG Sbjct: 5265 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 5324 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 A GAAGA GAAGAAGAAGA GA GA GA GAA AAG GG Sbjct: 5325 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGG 5364 Score = 346 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05 Identities = 160/241 (66%), Positives = 160/241 (66%), Strand = Plus / Plus Query: 2133 CCCTTTGCTTTGGAAGGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAA 2191 CCCT TG GAAG A A G G A A AG AAG A AAG GA G AG A Sbjct: 5237 CCCTGTGTGAAAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAA-GAAGAAGAAG 5294 Query: 2192 AAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGA 2249 AA A G AG G A G GAA AA AAG AAGAA AAGAAG AAGA GA GAAGA GA Sbjct: 5295 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGAAGAAG-AAGAAGAAGAAGAAGA 5352 Query: 2250 GGAAGATGAAG-AGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAG 2308 GAAGA G AG AGGA GAGGAGGAGGAGGA GA GAAGAAGA G AGA GAAGAAGA G Sbjct: 5353 AGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAGGGAGAAGAAGAAGA-G 5411 Query: 2309 ATGA-T-GA-TGATGAATA-AGTTGGTTCTAGCGCAGTTTTTTTTTTCTTG-TCTATAAA 2363 TG T GA TG TGA T A TT TT TA A TT TTT TTT TT T TAT A Sbjct: 5412 TTGGGTAGACTGGTGACTTTATTTTATT-TATTT-ATTTATTTATTTATTTATTTATTTA 5469 Query: 2364 GC-ATTTA 2370 ATTTA Sbjct: 5470 TTTATTTA 5477 >Z92547 Human DNA sequence from PAC 863K19 on chromosome X. Contains STS. Length = 134,845 Plus Strand HSPs: Score = 371 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06 Identities = 121/167 (72%), Positives = 121/167 (72%), Strand = Plus / Plus Query: 2160 ATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-A 2218 AT TC AG TAAA AAA C GA G AG AAA AAG AG G AGG GA AA A Sbjct: 74281 ATCTC-AGTTAAATAAAA-CAGGAAGAAG-AAAGAAGA-AGAAGAAGAGGAAGAGGAAGA 74336 Query: 2219 GCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG-GATGAGGAGGAGGAG 2277 G AAGAA A GAAG A GA GA GAAGATGA GAAGA GAAGA GA GA GA GA GA Sbjct: 74337 GGAAGAAGAGGAAG-AGGAAGAAGAAGATGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAA 74395 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 74396 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 74444 Score = 364 (54.6 bits), Expect = 2.9e-06, P = 2.9e-06 Identities = 94/115 (81%), Positives = 94/115 (81%), Strand = Plus / Plus Query: 2213 AAAAAAGCAAGAA-AAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAG 2271 AAAA AG AAGAA AAAGAAG AAGA GA GA GA GAGGAAGA GAAGA GA GA GAG Sbjct: 74294 AAAACAGGAAGAAGAAAGAAG-AAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAGGAAGAG 74352 Query: 2272 GAGGAGGAAGATGAAGAAGATGAAGAT-GAAGAAGAAGATGATGATGATGAATAAG 2326 GA GA GAAGATGAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 74353 GAAGAAGAAGATGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 74408 Score = 336 (50.4 bits), Expect = 5.4e-05, P = 5.4e-05 Identities = 112/152 (73%), Positives = 112/152 (73%), Strand = Plus / Plus Query: 2170 AAAGGAA-A-GCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAA 2226 A AGGAA A G GA G AG A AA AGG AG G AAG GAA AA AG AAGA Sbjct: 74297 ACAGGAAGAAGAAAGAAGAAGAAGAAGAGGAAGAGG--AAGAG-GAAGAAGAGGAAGAGG 74353 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAA-GATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AAGAAG AAGA GA GAAGA GA GAA GA GAAGA GA GA GA GA GA GAAGA GA Sbjct: 74354 AAGAAG-AAGATGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 74412 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 AGAAGA GAAGA GAAGAAGAAGA GA GA GA GA Sbjct: 74413 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGA 74448 Score = 329 (49.4 bits), Expect = 0.00011, P = 0.00011 Identities = 111/155 (71%), Positives = 111/155 (71%), Strand = Plus / Plus Query: 2170 AAAGGAA-A-GCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAA--AAGCAAGAA 2225 A AGGAA A G GA G AG A AA AGG AG G AGG GAA A AAG A GAA Sbjct: 74297 ACAGGAAGAAGAAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAGGAAG-AGGAA 74355 Query: 2226 AAAGAAGGAAGAGGAGGAAGATGAG-GAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 AAGAAG A GA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA G Sbjct: 74356 GAAGAAG-ATGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 74414 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 AAGAAGA GAAGA GAAGAAGAAGA GA GA GA GA Sbjct: 74415 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGACGA 74451 >Y12859 L.japonicus gln1, pge1 & krm genes Length = 23,326 Minus Strand HSPs: Score = 370 (55.5 bits), Expect = 1.5e-06, P = 1.5e-06 Identities = 766/1365 (56%), Positives = 766/1365 (56%), Strand = Minus / Plus Query: 2105 GATTAAGGAAAGAAATAGAACATGGCAGAACTTTATGAAAGAAATC-AAGATTCTAGTTA 2047 G TTAAG AAA AAATA A T A A T ATGAAA AAAT AA ATTC A TT Sbjct: 7764 GTTTAAGAAAAAAAATATTAT-TAT-ATATATAAATGAAATAAATATAAAATTCCAATT- 7820 Query: 2046 TACCAAAATATCACGTATCTGTAGATCCACAGCAACTCCAGAA-ATAACTAGAACTTCAA 1988 TA AAAAT A T CT TA T C T AA ATAA A AA T A Sbjct: 7821 TAG-AAAATTGGATCTGACTCTACGTGTTCGTTTGGTGGTCAAGATAAG-ATAAGAT-AT 7877 Query: 1987 TAAATGAACATAAAAATA-CAAGATCATTA-TA-ACAATC-T-ATAACTCATGAAA-TGG 1934 A ATGA TAA ATA CA G T TT T AC A C T ATAA AT A A T Sbjct: 7878 GACATGATATTAATCATATCATGTTGTTTGCTGCACCAACATGATAAG--ATAACACTAT 7935 Query: 1933 CATAGTCTAATATTTGCAAAGTTATGCCTCATTGAGGTGCAATTATCTACCAGATCCTAA 1874 CAT GTCT ATAT C A T ATG C CAT A GTG AA T TA C GA A Sbjct: 7936 CAT-GTCTCATATC--CTA--TCATGTC-CATC-ACGTGTAAAAGT-TATCTGAGGGGGA 7987 Query: 1873 CTCTATTA-AAACCAGAATGTAG-AGACTTTGATTAAAGGGTAGACACTGCCACCTTCTG 1816 CTAT A AAA C A TA AG T GAT AG TA A A T C TTC G Sbjct: 7988 G-CTATGATAAAACTTATCCTAACAGGATAAGATACTAGT-TATATATTTTCT--TTCCG 8043 Query: 1815 AATGCAAAAAAGCACTCTACAGGT-TTACACTGTCAGACC-TTAATCCTTAGTAGGAAAT 1758 AT C AA A T TA A T TT A T T A A TT AT T A TA AA T Sbjct: 8044 TATCCTAACTCCAAAT-TA-ATTTATTTTAATATTATATAATTTATAATAA-TATTAA-T 8099 Query: 1757 GTGGTCTTAAAAAAAAAAGGTAATTTGTCAATAAACATGCAATTAGG-TTAAGAAACATC 1699 T T A AAAAA A TAATTT A AA A AATTA TT A AAA A Sbjct: 8100 -TAATAAATATAAAAATAT-TAATTTAAAGAAAATAAAAAAATTATTATTCATAAATAG- 8156 Query: 1698 TAGAAATAAAC-ACT---TTTCAGA-AT-GACTAAAGCTGAAAATTA-AGTA-TTTAATA 1647 TA AAATA AC ACT TTTCA A AT GA T A A A TA A TA TTTAATA Sbjct: 8157 TA-AAATAGACTACTCACTTTCAAATATTGATTTATTAATAGTAATATACTAATTTAATA 8215 Query: 1646 TTTCAATTTACTGAACTATAAGAGTTATAGATTTCCTTAATCTTATTAATTTAC-TGGAC 1588 TTT AT T CT T TAA A TTAT AT T CTTA T T AT AATTTA T GA Sbjct: 8216 TTTTTATCTCCTATTATTTAAAAATTATTTATCTACTTA-TATAAT-AATTTAAATAGAA 8273 Query: 1587 AGAGCAGCAGACTTG-TAAT-TT---AACTTAGTGATGCTGTGGTTTTT-TGA-GTATCT 1535 AG C GA T TAAT TT AA TTAGT A T T T TTT T A GT TC Sbjct: 8274 AGTACTTTTGAAATAATAATATTTTTAATTTAGTTAATTTTTATTATTTATCACGTGTCA 8333 Query: 1534 AAAGGAAAAGAACATAAAT-GTTT-CAGGATATGACTAAGAAAAATATAGCCTATATTAC 1477 AA AA GAA A AAT G T CA T TGA T AA A TA TA A TA Sbjct: 8334 CAATTAAGTGAAAACCAATTGGATACAAATTTTGATTTTTTAACAG-TAA--TAGACTAA 8390 Query: 1476 TTTGTCTAGCCTGTTTTTGTACTGTA-TGCCAAGCCATTTGAAAATGC-TCATTTTTGAC 1419 TTT T T CT T T T T TA T A ATTT AA AT T A TTTTGA Sbjct: 8391 TTTATATTTTCTTATCTACTTATATAATATTTATA-ATTTAAATATAAATTACTTTTGAA 8449 Query: 1418 TTGAAGTGACTA-CCAACATTTTCATGAACTTCAAGATACTGGGGAATAACAAAAC-CAA 1361 T AA T A TA CC ATTTT T AACTT A T T A T ACA C CAA Sbjct: 8450 AT-AA-TAA-TATCCTTAATTTTGTT-AACTTTTAT-TGTTAATTA-TCACATGTCACAA 8503 Query: 1360 CATAAATGTACACAGCCTTTGTCTGAGTCTGATTACATTTTAGTCAAAAAAACCCTAATT 1301 C TAA TG A A A TT GT T A CTG TA ATTTTA T AAAA A TA TT Sbjct: 8504 C-TAAGTGAAAA-ACAATTGGT-TAA--CTGCATA-ATTTTATTTAAAATATAGGTATTT 8557 Query: 1300 T--ATTTGGTCCTCTGCATTCTTTGAAGGATGAGGACTTATATCAACACCATACTTAA-T 1244 T A T T A T TT A AT A TT TAT AT T AA T Sbjct: 8558 TCAAAACAATAAAATAGACTAATTAATAAATTTTAAATT-TATTTTAGTTATTTTAAAAT 8616 Query: 1243 GTAG-CTGTTACCCTAAAAACTTATTACACCTCAAACTAAGTACAATCATACATCTGGCG 1185 TAG CT T C T AAAA TAT A A T AAA T AGTA AAT AT CAT T Sbjct: 8617 ATAGACTCATTCA-TGAAAATGTATAAAAAATTAAATTTAGTAGAATAATCCATTTTTAA 8675 Query: 1184 TACTTGTCATCATTTTACCAAGC-AAACCC-ACACTTCTTACCTTTTCGTATTTT-TCCT 1128 A TT T AT TT T C AA AAA A AC T TT CCTT TC TAT T TCCT Sbjct: 8676 -ATTT-T-ATTTTTATTCAAATATAAATTTGATACATTTTTCCTTATCATATCATGTCCT 8732 Query: 1127 TCAGCTTC-GCAGC-CTT-CTTTTCATAAGGCTGCTTGTC-AT-CTGCAGCAGTGTTATT 1073 T A C T GCA C C C T ATAAG T GTC AT CTGC TGTTAT Sbjct: 8733 T-ATCATGTGCACCTCAAACATAAGATAAGA-TAAAAGTCTATTCTGCCCTTATGTTAT- 8789 Query: 1072 CCACATCTCTCCCAGTTTCTTCGCAACATCACCAATGGACAGGCCAGGATGTTCTCCTTT 1013 CC T CT CA TTC C A CAT A CA TG C CCA A C T Sbjct: 8790 CCTGTTG-CTATCATGTTCA-CATATCAT-ATCA-TGTTCTAACCACCAAACGGACATA- 8844 Query: 1012 GATTTTTGGGCGATACTCAG-AGCAGAAG-AGGAAG-AAGGCCGAACTAAAAAAAAAATT 956 GA TT G G AT CT AG AG A A AA AA C AA AA AAAA TT Sbjct: 8845 GAATTGAGAGA-ATCCTGAGCAGTATCTTTACCAAACAAATTCAAAG-AATCAAAAGGTT 8902 Query: 955 A--ATTTTAGG-ATTTTAAGTTAACAG-ATCACA-A--AAACAAATACTATCAGG-TGT- 905 A A T GG ATTTTA TT CA AT A A A AAA AA A ATCA TGT Sbjct: 8903 AGAAGAATCGGTATTTTA--TTCTCATTATTAAATAGGAAATTAAAAGAATCAAAATGTC 8960 Query: 904 ACACTGCATTGCTATTTAAAGCTGCCTGTGAATTTCTGTGATGCATTGGACAGGGTGCAA 845 A AC G AT TATTT A CT C T T A T T T AT ATTG CA T CA Sbjct: 8961 AGAC-GAATCATTATTTTATTCT-CATATTAGTAATTATAATA-ATTGTGCATACTTCAT 9017 Query: 844 ATACTA-TAAT-ATACTAAATATCCTTCACAACCAAAGCTTAATTTAC-AACTATTTAAT 788 AC TAA ATAC A A AT TT AC A CT A TTAC AA TA TTAAT Sbjct: 9018 C-ACGGGTAAACATACCATAAATAGTTTCTGACTATTTCTCA--TTACTAATTAATTAAT 9074 Query: 787 TTATACTAGCT-AGAACCCTAGATGA-ACATTCTACAA-TTACACTATTT 741 TA A TA T AG C T T A AC TTCTA A TT A T TTT Sbjct: 9075 ATACAATAAATGAGTCTCATTATTCACACTTTCTATGAGTTTTAATTTTT 9124 >X69986 R.norvegicus gene for GABAA receptor delta subunit Length = 3500 Plus Strand HSPs: Score = 368 (55.2 bits), Expect = 1.5e-06, P = 1.5e-06 Identities = 168/259 (64%), Positives = 168/259 (64%), Strand = Plus / Plus Query: 2165 GAGCTAAAG-GAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAA-AAGCAA 2222 GAG A AG GA AG GA AG A A AGG AG G AAG GAAA AAG AA Sbjct: 937 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGAAGGAAAGAA-GAAAGGAAGGAA 995 Query: 2223 GAAAAAGAAGGAAG-AGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 G AA GAAGGAAG A GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAG Sbjct: 996 GGAAG-GAAGGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 1054 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG-TTGGT--TCTAGCG 2338 A GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA G TTGG T TAGC Sbjct: 1055 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGGGTTGGGGATTTAGCT 1114 Query: 2339 CAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCA-CTCCTTT 2397 CAG T CTTG CTA G A CCC GT CA C CA CTCC Sbjct: 1115 CAGCGTAGAGCG-CTTGCCTAGCC-G-AGACGGGCCCTGGGTTCAGTCCCCAGCTCCGAA 1171 Query: 2398 TAAAGAAAAA-AATTGAAATGTAAG 2421 AAA AAAAA AA GAAA G AAG Sbjct: 1172 AAAAAAAAAAGAAAAGAAA-GAAAG 1195 Score = 367 (55.1 bits), Expect = 1.7e-06, P = 1.7e-06 Identities = 125/180 (69%), Positives = 125/180 (69%), Strand = Plus / Plus Query: 2165 GAGCTAAAG-GAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCT-GAAAAAAGCA 2221 GAG A AG GA AG GA AG A A AG GAG G AAGG GAA AAAG A Sbjct: 931 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGAAGGAAAGAAGAAAGGA 990 Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AG AA GAAGGAAG G AGGAAGA GA GAAGA GAAGA GA GA GA GA GA GAAG Sbjct: 991 AGGAAG-GAAGGAAG-GAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 1048 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCAG 2341 A GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG GG T G G A Sbjct: 1049 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGGGTTGGGGAT 1108 Query: 2342 TT 2343 TT Sbjct: 1109 TT 1110 Score = 245 (36.8 bits), Expect = 0.66, P = 0.48 Identities = 89/117 (76%), Positives = 89/117 (76%), Strand = Plus / Plus Query: 2214 AAAAAGCAAGAAAAAGAAGGA-AGAG-GAGGAAGATGAGGAAGATG--AAGAGGATGAGG 2269 A A AG AGA A AGA GA AGAG GAG AGA GAGGAAGA G AAGA GA AGG Sbjct: 932 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA-GAGGAAGAAGGAAAGAAGAA-AGG 989 Query: 2270 A-GGA-GGA-GGAAGATGAAG-AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 A GGA GGA GGAAG GAAG AAGA GAAGA GAAGAAGAAGA GA GA GA GAA AA Sbjct: 990 AAGGAAGGAAGGAAG--GAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 1047 Query: 2326 G 2326 G Sbjct: 1048 G 1048 Score = 235 (35.3 bits), Expect = 1.9, P = 0.85 Identities = 111/158 (70%), Positives = 111/158 (70%), Strand = Plus / Plus Query: 2183 ATGCAG-CAAAAAAGGG-AG-TTGTCAAGGCTGAAAAA-AGCAAGAAAAAGA-AG-GA-A 2235 A GCAG CA AA A G A TT T AA TGA A A AG AGA A AGA AG GA A Sbjct: 885 AAGCAGGCAGAACACTGTACATTATAAATCTTGAGAGAGAGAGAGAGAGAGAGAGAGAGA 944 Query: 2236 GAG-GAG-GA-AGATGAG-GA-AGATGAAGA-GGATGAGGAGGA-GGA-GGAAG--ATGA 2285 GAG GAG GA AGA GAG GA AGA GAAGA GGA AG AG A GGA GGAAG A GA Sbjct: 945 GAGAGAGAGAGAGA-GAGAGAGAGAGGAAGAAGGAA-AGAAGAAAGGAAGGAAGGAAGGA 1002 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AG A A GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 1003 AGGA-AGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 1042 >AC002410 Human BAC clone RG264L19 from 7p15-p21, complete sequence. Length = 96,217 Plus Strand HSPs: Score = 324 (48.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06 Identities = 100/131 (76%), Positives = 100/131 (76%), Strand = Plus / Plus Query: 2202 TGTCAAGGCTGAA-AA-AAGCAAGAAAAAGAAGG--AAGAGGA-GG--AAGATGAGGAAG 2254 TGT AA G GAA AA AAG AAGAA AGAAGG AA GGA GG AAGA GAGGAAG Sbjct: 46078 TGTGAAAGAAGAAGAAGAAG-AAGAAGGAGAAGGGGAATGGGAAGGGGAAGAAGAGGAAG 46136 Query: 2255 ATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG 2314 A GAAGAGGA GAGGA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA Sbjct: 46137 AGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAC 46196 Query: 2315 ATGATGAATAAG 2326 A GA AA AAG Sbjct: 46197 AAGAACAAGAAG 46208 Score = 322 (48.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06 Identities = 106/146 (72%), Positives = 106/146 (72%), Strand = Plus / Plus Query: 2170 AAAGGA-AAGCCTGATGCAGCAAAA-AAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAA 2226 AAAG A AAG GA G AG A A AAGGG TG AAGG GAA AA AG AAGA Sbjct: 46082 AAAGAAGAAGAA-GAAGAAGAAGGAGAAGGGGAATGGGAAGGG-GAAGAAGAGGAAGAGG 46139 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AAGA GGAAGAGGA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA AA Sbjct: 46140 AAGA-GGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAA 46198 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGA 2315 GAA A GAAG GAAGAAGAAGA G GA Sbjct: 46199 GAACAAGAAGGAGAAGAAGAAGAGGTGGA 46227 Score = 214 (32.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06 Identities = 248/431 (57%), Positives = 248/431 (57%), Strand = Plus / Plus Query: 581 GTTTCT-TAGCTAATACTTGTTCATATTGGTTATATTTAAAT-AGTATAAAATTCCTGTT 638 GT TC T G TAA CTTGTTCA ATT T AT TTTA T AGT T A AT T TT Sbjct: 29386 GTATCAGTTGTTAAGTCTTGTTCA-ATTC-TGAT-TTTATTTGAGTCTGATATCTTTTTT 29442 Query: 639 GGGTGGG-AGTGTTCCCAGAGCATTTGAATTAGACATTTGGTCTCCTTTGCCCAGTGTAT 697 T G A T T CA AG ATT ATT A T T TC CC A TGT T Sbjct: 29443 TATTAGTTAATCTAGTCAAAGGATTGTCATTTCATTCATCTTGTCTGAAACCAACTGT-T 29501 Query: 698 CTCCTTTTGATCTTTT-TATTTCTTGAAAAATACTATCCCTTTGAAATA-G-TGTAAT-T 753 T T TTGA CTTTT TA TT TT AA T TAT C TT A T G TGTAAT T Sbjct: 29502 -T--TGTTGACCTTTTCTAATTTTT-AATGTTTTTATTTCATTTATTTCTGCTGTAATCT 29557 Query: 754 GTAGAATGTTCATCTAGGGTTCTAGCTA--GTATAAATTAAATAGTTGTAAATTAAGCTT 811 TA AT T C TCT G T CTA CT G T A TT A T T T TT AG T Sbjct: 29558 TTATTATTTCCTTCTTTG-TGCTAACTTTGGGCTTAGTTTACTCTTCTTTTTTTTAGTTA 29616 Query: 812 TGGTTGTGAAGGATATTTAGTATATTATAGTAT-TTGCACCCTGTCCAATGCATCACAGA 870 T TTGT AAGG T TT GT TATT AG AT TT C T A TG A CA Sbjct: 29617 T--TTGTAAAGGTTTGTT-GTTTATTTGAG-ATCTTTCTTTTTTGGTACTGTAGG-CATT 29671 Query: 871 AATT-C-ACAGGCAGCTTTAAATAGCAATGCAGT-G-TACACCTGATAGTATTTGTTTTT 926 ATT C A A C CTTT TAG A TGC T G T CA C T GT TT G T T Sbjct: 29672 TATTGCTATAAACTTCTTTCC-TAGAACTGCTTTTGCTGCATCCCTT-GTTTTGGCATAT 29729 Query: 927 GTGATCTGTTAACTTAAAATCCTAAAATTAATTTTTTTTTTA-GTTCGGCCTTCTTCCTC 985 TG T TGTT A TT A T TA A TTAATTTTTT TTTA GTT G TTCTT T Sbjct: 29730 -TG-TGTGTTCATTTTCATT--TAGA-TTAATTTTTTATTTATGTTTGTT-TTCTTATTT 29783 Query: 986 TTCTGCTCTGAGTATCGCCCAAAAAT 1011 C T TG GT TC C AAA AT Sbjct: 29784 GACCCAT-TG-GTTTCCCAGAAATAT 29807 >A42910 Sequence 42 from Patent WO9502701. Length = 275 Plus Strand HSPs: Score = 316 (47.4 bits), Expect = 1.6e-06, P = 1.6e-06 Identities = 114/152 (75%), Positives = 114/152 (75%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCA-GCAAAAAAGGGAGTT-GTCAAGGCTGAAA-AAAGCAAGAAAA 2227 AAGGAA G GA G A G AA AAGG AG T G CA G C G AA AAAG AAGAAA Sbjct: 125 AAGGAAGGAAGGAAGGAAGGAAGGAAGGCAGGTAGGCA-GACAGGAAGAAAGAAAGAAAG 183 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG-GATGAG-GAG-GAGGAGGAAGATG 2284 A AAG AAGA AG AAGA GAG AGA GA GAG GA GAG GAG GA GA GAAGA G Sbjct: 184 A-AAGAAAGAA-AGAAAGA-GAGAGAGA-GA-GAGAGA-GAGAGAGAGAAGAAGAAGAAG 237 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 AAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA Sbjct: 238 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 275 Score = 305 (45.8 bits), Expect = 5.1e-06, P = 5.1e-06 Identities = 115/157 (73%), Positives = 115/157 (73%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCA-GCAAAAAAGGGAGTT-GTCAAGGCTGAAAAAAGCAAGAAAAA 2228 AAGGAA G GA G A G AA AAGG AG G CA G G A A AG AAGAAA A Sbjct: 117 AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGCAGGTAGGCAGACAGGAAGAAAGA 176 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG-GATGAG-GAG-GAG-GAG-GAAGAT 2283 AAG AAGA AG AAGA AG AAGA GA GAG GA GAG GAG GAG GAG GAAGA Sbjct: 177 -AAGAAAGAA-AGAAAGAA-AGAAAGA-GA-GAGAGA-GAGAGAGAGAGAGAGAGAAGAA 230 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 231 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 273 >U72731 Acipenser fulvescens microsatellite LS-22, partial sequence. Length = 391 Plus Strand HSPs: Score = 312 (46.8 bits), Expect = 1.7e-06, P = 1.7e-06 Identities = 116/172 (67%), Positives = 116/172 (67%), Strand = Plus / Plus Query: 2193 AAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGA 2252 AAA GGAG CA CT AA AAA AA AAA A AA A A GA GAAGA GA GA Sbjct: 222 AAAAGGAGAA--CATTTCTAAATAAATAAATAAATA-AATAANTANGAAGAAGAAGAAGA 278 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGA 2312 AGA GAAGA GA GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA Sbjct: 279 AGAAGAAGANGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 338 Query: 2313 TGATGATGAATAA-GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTAT-AAAG 2364 GA GA GAA A GTT T TA C A TT T TT T GT AT AAAG Sbjct: 339 AGAAGAAGAAGATTGTTAATGATA-CA-ATTTCGTATTAGATGGTGCATTAAAG 390 Score = 277 (41.6 bits), Expect = 6.7e-05, P = 6.7e-05 Identities = 91/133 (68%), Positives = 91/133 (68%), Strand = Plus / Plus Query: 2194 AAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAG-ATGAGGA 2252 AAG A TG AA G GAA A C A A AAA AA AA A A AA A GA GA Sbjct: 211 AAGCTATATGGAAAAGGAGAACATTTCTAAATAAATAAATAA-ATAAATAANTANGAAGA 269 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGA 2312 AGA GAAGA GA GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA Sbjct: 270 AGAAGAAGAAGAAGAAGANGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 329 Query: 2313 TGATGATGAATAAG 2326 GA GA GAA AAG Sbjct: 330 AGAAGAAGAAGAAG 343 >S76368 ORF 5' of ECLF2...ECRF3=G protein-coupled receptor homolog Length = 3720 Minus Strand HSPs: Score = 365 (54.8 bits), Expect = 2.1e-06, P = 2.1e-06 Identities = 133/193 (68%), Positives = 133/193 (68%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTCA C TC TCA CTTCTTCTTCA CTTC TC CTTC TCTTC C TC T Sbjct: 1564 CAGCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTT 1623 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTT--GCTT-TT-T 2214 C C TC TCTTCA CTTC TCA CTTC TC CTTC TTC TTCTT GCTT TT T Sbjct: 1624 CAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTC-TTCAGCTTCTTCAGCTTCTTCT 1682 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGC 2155 TCAGC T C C C T TT GCT C TCAG CTT T CTT AGCT T T CAGC Sbjct: 1683 TCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAG-CTTCTTCTTCAGCTTCTTCTTCAGC 1741 Query: 2154 AATATCCTTCCAAAGC 2139 T T CTTC AGC Sbjct: 1742 T-TCTTCTTCTTCAGC 1756 Score = 350 (52.5 bits), Expect = 1.0e-05, P = 1.0e-05 Identities = 118/158 (74%), Positives = 118/158 (74%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTC TC TCA C TCTTCTTCTTCA CTTC CTTCTTCA CTTC TC TC T Sbjct: 1813 CAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTGCTTCTTCAGCTTCTTCTTCTT 1872 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTT--GCTTTTT 2214 C C TC TCTTCA CTTC TCA CTTC TC TCTTC CTTCTTTTTCTT GCTT TT Sbjct: 1873 CAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTTTTCTTCAGCTTCTT 1932 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCT 2172 C C TT CA CT C T T TT CT C TC CTT TCCT Sbjct: 1933 -CTTC-TT--CAGCTTCTTCTCTTCCTTC-TCCTTCTTCTCCT 1970 Score = 340 (51.0 bits), Expect = 3.0e-05, P = 3.0e-05 Identities = 128/184 (69%), Positives = 128/184 (69%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TCA C TC TC CTTCTTC TCTTCA CTTCTTC TCTTC C TC TC T Sbjct: 1780 CTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTT 1839 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTTGCTTTTTTCAGC 2209 C TC CTTC CTTC TCA CTTC TC TCTTC CTTCTT TTC GCTT TT CAGC Sbjct: 1840 CTTCAGCTTCTGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCA-GCTTCTT-CAGC 1897 Query: 2208 CTTGACAACTCC--CTT-TTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGCAA 2153 T C CT C CTT TTTT CT CA C CTT T CTT AGCT T T C C Sbjct: 1898 TTCTTCTTCTTCAGCTTCTTTTTCTTCAGCTT-CTTCTTCTTCAGCTTCTTCT-CTTCCT 1955 Query: 2152 TATCCTTC 2145 T TCCTTC Sbjct: 1956 TCTCCTTC 1963 Score = 328 (49.2 bits), Expect = 0.00011, P = 0.00011 Identities = 116/159 (72%), Positives = 116/159 (72%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTCA C TC TCA CTTCTTCTTCA CTTC T T CTTCA CTTC TC TC T Sbjct: 1696 CAGCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTC-T-T-CTTCAGCTTCTTCTTCTT 1752 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTTGCTT-TT-T 2214 C C TC TCTTCA CTTC TCA CTTC TC TCTTC CTTCTT CTT CTT TT T Sbjct: 1753 CAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCAGCTT-CTTCTTCT 1811 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTT 2171 TCAGC T C CT C TT T CT C TCAG CTT T CTT Sbjct: 1812 TCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAG-CTTCTGCTT 1854 Score = 326 (48.9 bits), Expect = 0.00013, P = 0.00013 Identities = 128/185 (69%), Positives = 128/185 (69%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTC TC TCA C TCTTCTTCTTCA CTTC TCTTCTTCA CTTC C TC T Sbjct: 1798 CAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTGCTTCTT 1857 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTT--GCTTTTT 2214 C C TC TCTTC TC C TC TCTTC C TCTTC CTTCTT TTCTT GCTT TT Sbjct: 1858 CAGCTTCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTT 1917 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCT-TTCCTTTAGCTCGATATGCAGC 2155 T C TT CA CT C T TT T C GC TC CT TTCCTT CT T T C C Sbjct: 1918 TTT-C-TT--CAGCTTCTTCTTCTTCAGCTTCTT-CTCTTCCTTCTCCTTCTTCTCCTCC 1972 Query: 2154 AATATCCTTC 2145 T TCCTTC Sbjct: 1973 T-TCTCCTTC 1981 Score = 316 (47.4 bits), Expect = 0.00038, P = 0.00038 Identities = 132/188 (70%), Positives = 132/188 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCA---TCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CTT TTCA C TC TCA CTTCTTCTTCA TCTTCA CTTCTTCA CTTC TC C T Sbjct: 1609 CTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTCTTCAGCTT 1668 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTC 2212 C TCA C TCTTC TC C TC TCTTC C TCTTC CTT TTC GCTT TT TTC Sbjct: 1669 CTTCAGCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAG-CTTCTTCA-GCTTCTTCTTC 1726 Query: 2211 AGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGCAA 2153 AGC TT C CT C TT T CT C TCAG CTT T CTT AGCT T T CAGC Sbjct: 1727 AGC-TT--CTTCTTCAGCTTCTTCTTCTTCAG-CTTCTTCTTCAGCTTC-T-T-CAGCT- 1778 Query: 2152 TATCCTTCCAAAGC 2139 T T CTTC AGC Sbjct: 1779 TCTTCTTCTTCAGC 1792 Score = 313 (47.0 bits), Expect = 0.00052, P = 0.00052 Identities = 129/182 (70%), Positives = 129/182 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCA---TCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CTT TTCA C TC TCA CTTCTTCTTCA TCTTCA CTTCTTCA CTTC TC C T Sbjct: 1519 CTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTCTTCAGCTT 1578 Query: 2269 CCTCATC--CT-CTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTT 2213 C TCA C CT CTTCA CTTC TCA CTTC TC TC C TTCTT CTT CTT TT Sbjct: 1579 CTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGC-TTCTTCAGCTT-CTTCTT- 1635 Query: 2212 CAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAA 2153 CAGC T CA CT C TT GCT C TCAG CTT C TT AGCT T T CAGC Sbjct: 1636 CAGCTTCTTCAGCTTC---TTCAGCTTCTTCAG-CTT-C-TTCAGCTTCTTCTTCAGCT- 1688 Query: 2152 TATCCTTC 2145 T T CTTC Sbjct: 1689 TCTTCTTC 1696 Score = 305 (45.8 bits), Expect = 0.0012, P = 0.0012 Identities = 121/187 (64%), Positives = 121/187 (64%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTC-- 2269 CTT TTCA C TC TC TCTTC CTTC TCTTCA CTTCTTCA CTTC TC TC TC Sbjct: 1732 CTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAG 1791 Query: 2268 CT-CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTTGCTTTTTTC 2212 CT C TC CTTC TCTTC TCA CTTC TC TCTTC CTTCTT TTCTT TT T Sbjct: 1792 CTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTG 1851 Query: 2211 AGCCTTGA-CAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAA 2153 CTT A C CT C T TT GCT C TC T CTT AGCT T T C CA Sbjct: 1852 CTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAG 1911 Query: 2152 TATCCTT 2146 TC TT Sbjct: 1912 CTTCTTT 1918 Score = 300 (45.0 bits), Expect = 0.0020, P = 0.0020 Identities = 112/157 (71%), Positives = 112/157 (71%), Strand = Minus / Plus Query: 2322 TTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC--CTCCT-C 2266 TTC TC TCA C TCTTCTTC C TCTTCA CTTCTTCA CTTC TC TC CT CT C Sbjct: 1676 TTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTC 1735 Query: 2265 ATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCAGCC 2208 TC CTTC TCTTC TCA CTTC TC TC C TTCTT CTT CTT TT TTCAGC Sbjct: 1736 TTCAGCTTCTTCTTCTTCAGCTTCTTCTTCAGC-TTCTTCAGCTT-CTTCTTCTTCAGCT 1793 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCT 2166 T CA CT C T TT T C GC TC CTT CTT AGCT Sbjct: 1794 TCTTCAGCTTCTTCTTCTTCAGCTTCTT-CTT--CTTCAGCT 1832 Score = 298 (44.7 bits), Expect = 0.0025, P = 0.0025 Identities = 106/144 (73%), Positives = 106/144 (73%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TT TC TCA C TCTTCTTCTTCA CTTC TCT CTTC T TCCT CT CT Sbjct: 1909 CAGCTTCTTTTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCT-CTTCCTTCTCCTTCTTCT 1967 Query: 2269 CCTCATCCTC-TTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTG-CTTTTTTC 2212 CCTC T CTC TTC TCTT CT TCTTC TCCTCTTC TTCT TTTCTT C TT TTC Sbjct: 1968 CCTCCTTCTCCTTC-TCTTTCT--TCTTC-TCCTCTTCTTTCTCTTTCTTCTCCTTCTTC 2023 Query: 2211 AGC--CTTGACAACTCCCTTTTT-TGCTG 2186 C CTT CT C TT TT T CTG Sbjct: 2024 TTCTACTTCTTCTCTACGTTGTTCTTCTG 2052 >L21693 Human (clone pHG2) prothymosin alpha gene, complete cds. Length = 333 Plus Strand HSPs: Score = 311 (46.7 bits), Expect = 2.2e-06, P = 2.2e-06 Identities = 129/192 (67%), Positives = 129/192 (67%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAGGA TTG G A A AG AA GGAA AG C G C GC AA GGGA T Sbjct: 60 GAAGGAAGTTGTGGAAGAGGCAGAAAATGGAAGAGAC-GCCCCTGCTAAC--GGGAATGC 116 Query: 2204 TCAAGGCTGAAAAA----AGCAAGAAAAAGA-AG-GAAGAGGAGGAAGATGAGGAAGATG 2257 T AA G GAAAA AGCA GAA GA AG GAAG GA GAAGA GAGGAAGA G Sbjct: 117 T-AATGAGGAAAATGGGGAGCAGGAAGCTGACAGTGAAGTAGATGAAGAAGAGGAAGAAG 175 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 G GGA GA GAGGAGGAGGAAGA GAAG GATG GA GAAGA GA G GATGA G Sbjct: 176 GTGGGGAGGAAGAGGAGGAGGAAGAAGAAGGTGATGGTGAGGAAGAGGATGGAGATGAAG 235 Query: 2318 ATGAATAAGTTGGTTC 2333 ATGA AAG TG TC Sbjct: 236 ATGAGGAAGCTGAGTC 251 Score = 215 (32.3 bits), Expect = 0.052, P = 0.051 Identities = 125/204 (61%), Positives = 125/204 (61%), Strand = Plus / Plus Query: 2138 TGCTTTGGAAGGATATTGCTGCATATCGAGCTAA-AGGAAAGCCTGATGCAGCAAAAAAG 2196 TGCT GA GGA A TG G A AGCT A AG AAG GATG AG A A A Sbjct: 114 TGCTAATGA-GGAAAATGGGGAGCAGGAAGCTGACAGTGAAGTA-GATGAAGAAGAGGAA 171 Query: 2197 GGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGA 2255 G AG TG AGG GA A AG AAGAA AAG G A G GAGGAAGA GA G AGA Sbjct: 172 GAAGGTGGGGAGGAAGAGGAGGAGGAAGAAGAAGGTG-ATGGTGAGGAAGAGGATGGAGA 230 Query: 2256 TGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 TGAAGA TGAGGA G GAG A T A G A G G G AG GAAGATGATGA Sbjct: 231 TGAAGA---TGAGGAAGCTGAGTCACCT-ACGGGCAAGCGG--GCAGCTGAAGATGATGA 284 Query: 2316 TGATGAATAAGTTGGTTCTA-GC-GCAG 2341 GATGA A GT G T C A G GCAG Sbjct: 285 GGATGACGATGTCGATACCAAGAAGCAG 312 Score = 191 (28.7 bits), Expect = 0.65, P = 0.48 Identities = 111/187 (59%), Positives = 111/187 (59%), Strand = Plus / Plus Query: 2142 TTGGAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAG 2200 T GG AG A GCTG A A GA TA A GAA A GA G AG AGG AG Sbjct: 129 TGGGGAGCAGGAAGCTG-ACAGTGAAGTAGATGAAGAAGAGGAAGAAGGTGGGGAGGAAG 187 Query: 2201 TTGTCAAGGCTGAAAAAAGCAA-GAAAAAGAAGGAAGA-GGAG--GAAGATGAGGAAGAT 2256 G AGG GAA AA G A G A GAAG A GA GGAG GAAGATGAGGAAG T Sbjct: 188 AGGAGGAGGAAGAAGAAGGTGATGGTGAGGAAG-AGGATGGAGATGAAGATGAGGAAGCT 246 Query: 2257 GAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGAT 2316 GA T GG AG GG AG TGAAGA GATGA GATGA GA G GAT A A Sbjct: 247 GAGTCACCTACGGGCAAGCGGGCAGCTGAAGATGATGAGGATGACGATGTCGAT-ACCAA 305 Query: 2317 GATGAATAAG 2326 GA G A AAG Sbjct: 306 GAAGCAGAAG 315 >M86409 Herpesvirus saimiri the most three prime end of the genome. Length = 43,658 Minus Strand HSPs: Score = 365 (54.8 bits), Expect = 2.6e-06, P = 2.6e-06 Identities = 133/193 (68%), Positives = 133/193 (68%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTCA C TC TCA CTTCTTCTTCA CTTC TC CTTC TCTTC C TC T Sbjct: 37263 CAGCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTT 37322 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTT--GCTT-TT-T 2214 C C TC TCTTCA CTTC TCA CTTC TC CTTC TTC TTCTT GCTT TT T Sbjct: 37323 CAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTC-TTCAGCTTCTTCAGCTTCTTCT 37381 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGC 2155 TCAGC T C C C T TT GCT C TCAG CTT T CTT AGCT T T CAGC Sbjct: 37382 TCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAG-CTTCTTCTTCAGCTTCTTCTTCAGC 37440 Query: 2154 AATATCCTTCCAAAGC 2139 T T CTTC AGC Sbjct: 37441 T-TCTTCTTCTTCAGC 37455 Score = 350 (52.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 118/158 (74%), Positives = 118/158 (74%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTC TC TCA C TCTTCTTCTTCA CTTC CTTCTTCA CTTC TC TC T Sbjct: 37512 CAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTGCTTCTTCAGCTTCTTCTTCTT 37571 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTT--GCTTTTT 2214 C C TC TCTTCA CTTC TCA CTTC TC TCTTC CTTCTTTTTCTT GCTT TT Sbjct: 37572 CAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTTTTCTTCAGCTTCTT 37631 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCT 2172 C C TT CA CT C T T TT CT C TC CTT TCCT Sbjct: 37632 -CTTC-TT--CAGCTTCTTCTCTTCCTTC-TCCTTCTTCTCCT 37669 Score = 340 (51.0 bits), Expect = 3.5e-05, P = 3.5e-05 Identities = 128/184 (69%), Positives = 128/184 (69%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TCA C TC TC CTTCTTC TCTTCA CTTCTTC TCTTC C TC TC T Sbjct: 37479 CTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTT 37538 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTTGCTTTTTTCAGC 2209 C TC CTTC CTTC TCA CTTC TC TCTTC CTTCTT TTC GCTT TT CAGC Sbjct: 37539 CTTCAGCTTCTGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCA-GCTTCTT-CAGC 37596 Query: 2208 CTTGACAACTCC--CTT-TTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGCAA 2153 T C CT C CTT TTTT CT CA C CTT T CTT AGCT T T C C Sbjct: 37597 TTCTTCTTCTTCAGCTTCTTTTTCTTCAGCTT-CTTCTTCTTCAGCTTCTTCT-CTTCCT 37654 Query: 2152 TATCCTTC 2145 T TCCTTC Sbjct: 37655 TCTCCTTC 37662 Score = 328 (49.2 bits), Expect = 0.00012, P = 0.00012 Identities = 116/159 (72%), Positives = 116/159 (72%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTCA C TC TCA CTTCTTCTTCA CTTC T T CTTCA CTTC TC TC T Sbjct: 37395 CAGCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTC-T-T-CTTCAGCTTCTTCTTCTT 37451 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTTGCTT-TT-T 2214 C C TC TCTTCA CTTC TCA CTTC TC TCTTC CTTCTT CTT CTT TT T Sbjct: 37452 CAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCAGCTT-CTTCTTCT 37510 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTT 2171 TCAGC T C CT C TT T CT C TCAG CTT T CTT Sbjct: 37511 TCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAG-CTTCTGCTT 37553 Score = 326 (48.9 bits), Expect = 0.00015, P = 0.00015 Identities = 128/185 (69%), Positives = 128/185 (69%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTC TC TCA C TCTTCTTCTTCA CTTC TCTTCTTCA CTTC C TC T Sbjct: 37497 CAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTGCTTCTT 37556 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTT--GCTTTTT 2214 C C TC TCTTC TC C TC TCTTC C TCTTC CTTCTT TTCTT GCTT TT Sbjct: 37557 CAGCTTCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTT 37616 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCT-TTCCTTTAGCTCGATATGCAGC 2155 T C TT CA CT C T TT T C GC TC CT TTCCTT CT T T C C Sbjct: 37617 TTT-C-TT--CAGCTTCTTCTTCTTCAGCTTCTT-CTCTTCCTTCTCCTTCTTCTCCTCC 37671 Query: 2154 AATATCCTTC 2145 T TCCTTC Sbjct: 37672 T-TCTCCTTC 37680 Score = 316 (47.4 bits), Expect = 0.00044, P = 0.00044 Identities = 132/188 (70%), Positives = 132/188 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCA---TCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CTT TTCA C TC TCA CTTCTTCTTCA TCTTCA CTTCTTCA CTTC TC C T Sbjct: 37308 CTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTCTTCAGCTT 37367 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTC 2212 C TCA C TCTTC TC C TC TCTTC C TCTTC CTT TTC GCTT TT TTC Sbjct: 37368 CTTCAGCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAG-CTTCTTCA-GCTTCTTCTTC 37425 Query: 2211 AGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGCAA 2153 AGC TT C CT C TT T CT C TCAG CTT T CTT AGCT T T CAGC Sbjct: 37426 AGC-TT--CTTCTTCAGCTTCTTCTTCTTCAG-CTTCTTCTTCAGCTTC-T-T-CAGCT- 37477 Query: 2152 TATCCTTCCAAAGC 2139 T T CTTC AGC Sbjct: 37478 TCTTCTTCTTCAGC 37491 Score = 313 (47.0 bits), Expect = 0.00060, P = 0.00060 Identities = 129/182 (70%), Positives = 129/182 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCA---TCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CTT TTCA C TC TCA CTTCTTCTTCA TCTTCA CTTCTTCA CTTC TC C T Sbjct: 37218 CTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTCTTCAGCTT 37277 Query: 2269 CCTCATC--CT-CTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTT 2213 C TCA C CT CTTCA CTTC TCA CTTC TC TC C TTCTT CTT CTT TT Sbjct: 37278 CTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGC-TTCTTCAGCTT-CTTCTT- 37334 Query: 2212 CAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAA 2153 CAGC T CA CT C TT GCT C TCAG CTT C TT AGCT T T CAGC Sbjct: 37335 CAGCTTCTTCAGCTTC---TTCAGCTTCTTCAG-CTT-C-TTCAGCTTCTTCTTCAGCT- 37387 Query: 2152 TATCCTTC 2145 T T CTTC Sbjct: 37388 TCTTCTTC 37395 Score = 305 (45.8 bits), Expect = 0.0014, P = 0.0014 Identities = 121/187 (64%), Positives = 121/187 (64%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTC-- 2269 CTT TTCA C TC TC TCTTC CTTC TCTTCA CTTCTTCA CTTC TC TC TC Sbjct: 37431 CTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAG 37490 Query: 2268 CT-CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTTGCTTTTTTC 2212 CT C TC CTTC TCTTC TCA CTTC TC TCTTC CTTCTT TTCTT TT T Sbjct: 37491 CTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTG 37550 Query: 2211 AGCCTTGA-CAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAA 2153 CTT A C CT C T TT GCT C TC T CTT AGCT T T C CA Sbjct: 37551 CTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAG 37610 Query: 2152 TATCCTT 2146 TC TT Sbjct: 37611 CTTCTTT 37617 Score = 300 (45.0 bits), Expect = 0.0023, P = 0.0023 Identities = 112/157 (71%), Positives = 112/157 (71%), Strand = Minus / Plus Query: 2322 TTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC--CTCCT-C 2266 TTC TC TCA C TCTTCTTC C TCTTCA CTTCTTCA CTTC TC TC CT CT C Sbjct: 37375 TTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTC 37434 Query: 2265 ATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCAGCC 2208 TC CTTC TCTTC TCA CTTC TC TC C TTCTT CTT CTT TT TTCAGC Sbjct: 37435 TTCAGCTTCTTCTTCTTCAGCTTCTTCTTCAGC-TTCTTCAGCTT-CTTCTTCTTCAGCT 37492 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCT 2166 T CA CT C T TT T C GC TC CTT CTT AGCT Sbjct: 37493 TCTTCAGCTTCTTCTTCTTCAGCTTCTT-CTT--CTTCAGCT 37531 Score = 298 (44.7 bits), Expect = 0.0029, P = 0.0029 Identities = 106/144 (73%), Positives = 106/144 (73%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TT TC TCA C TCTTCTTCTTCA CTTC TCT CTTC T TCCT CT CT Sbjct: 37608 CAGCTTCTTTTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCT-CTTCCTTCTCCTTCTTCT 37666 Query: 2269 CCTCATCCTC-TTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTG-CTTTTTTC 2212 CCTC T CTC TTC TCTT CT TCTTC TCCTCTTC TTCT TTTCTT C TT TTC Sbjct: 37667 CCTCCTTCTCCTTC-TCTTTCT--TCTTC-TCCTCTTCTTTCTCTTTCTTCTCCTTCTTC 37722 Query: 2211 AGC--CTTGACAACTCCCTTTTT-TGCTG 2186 C CTT CT C TT TT T CTG Sbjct: 37723 TTCTACTTCTTCTCTACGTTGTTCTTCTG 37751 >X64346 Herpesvirus saimiri complete genome DNA Length = 112,930 Minus Strand HSPs: Score = 365 (54.8 bits), Expect = 2.6e-06, P = 2.6e-06 Identities = 133/193 (68%), Positives = 133/193 (68%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTCA C TC TCA CTTCTTCTTCA CTTC TC CTTC TCTTC C TC T Sbjct: 106570 CAGCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTT 106629 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTT--GCTT-TT-T 2214 C C TC TCTTCA CTTC TCA CTTC TC CTTC TTC TTCTT GCTT TT T Sbjct: 106630 CAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTC-TTCAGCTTCTTCAGCTTCTTCT 106688 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGC 2155 TCAGC T C C C T TT GCT C TCAG CTT T CTT AGCT T T CAGC Sbjct: 106689 TCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAG-CTTCTTCTTCAGCTTCTTCTTCAGC 106747 Query: 2154 AATATCCTTCCAAAGC 2139 T T CTTC AGC Sbjct: 106748 T-TCTTCTTCTTCAGC 106762 Score = 350 (52.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 118/158 (74%), Positives = 118/158 (74%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTC TC TCA C TCTTCTTCTTCA CTTC CTTCTTCA CTTC TC TC T Sbjct: 106819 CAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTGCTTCTTCAGCTTCTTCTTCTT 106878 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTT--GCTTTTT 2214 C C TC TCTTCA CTTC TCA CTTC TC TCTTC CTTCTTTTTCTT GCTT TT Sbjct: 106879 CAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTTTTCTTCAGCTTCTT 106938 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCT 2172 C C TT CA CT C T T TT CT C TC CTT TCCT Sbjct: 106939 -CTTC-TT--CAGCTTCTTCTCTTCCTTC-TCCTTCTTCTCCT 106976 Score = 340 (51.0 bits), Expect = 3.5e-05, P = 3.5e-05 Identities = 128/184 (69%), Positives = 128/184 (69%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TCA C TC TC CTTCTTC TCTTCA CTTCTTC TCTTC C TC TC T Sbjct: 106786 CTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTT 106845 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTTGCTTTTTTCAGC 2209 C TC CTTC CTTC TCA CTTC TC TCTTC CTTCTT TTC GCTT TT CAGC Sbjct: 106846 CTTCAGCTTCTGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCA-GCTTCTT-CAGC 106903 Query: 2208 CTTGACAACTCC--CTT-TTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGCAA 2153 T C CT C CTT TTTT CT CA C CTT T CTT AGCT T T C C Sbjct: 106904 TTCTTCTTCTTCAGCTTCTTTTTCTTCAGCTT-CTTCTTCTTCAGCTTCTTCT-CTTCCT 106961 Query: 2152 TATCCTTC 2145 T TCCTTC Sbjct: 106962 TCTCCTTC 106969 Score = 328 (49.2 bits), Expect = 0.00012, P = 0.00012 Identities = 116/159 (72%), Positives = 116/159 (72%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTCA C TC TCA CTTCTTCTTCA CTTC T T CTTCA CTTC TC TC T Sbjct: 106702 CAGCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTC-T-T-CTTCAGCTTCTTCTTCTT 106758 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTTGCTT-TT-T 2214 C C TC TCTTCA CTTC TCA CTTC TC TCTTC CTTCTT CTT CTT TT T Sbjct: 106759 CAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCAGCTT-CTTCTTCT 106817 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTT 2171 TCAGC T C CT C TT T CT C TCAG CTT T CTT Sbjct: 106818 TCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAG-CTTCTGCTT 106860 Score = 326 (48.9 bits), Expect = 0.00015, P = 0.00015 Identities = 128/185 (69%), Positives = 128/185 (69%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TTC TC TCA C TCTTCTTCTTCA CTTC TCTTCTTCA CTTC C TC T Sbjct: 106804 CAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTGCTTCTT 106863 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTT--GCTTTTT 2214 C C TC TCTTC TC C TC TCTTC C TCTTC CTTCTT TTCTT GCTT TT Sbjct: 106864 CAGCTTCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAGCTTCTT 106923 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCT-TTCCTTTAGCTCGATATGCAGC 2155 T C TT CA CT C T TT T C GC TC CT TTCCTT CT T T C C Sbjct: 106924 TTT-C-TT--CAGCTTCTTCTTCTTCAGCTTCTT-CTCTTCCTTCTCCTTCTTCTCCTCC 106978 Query: 2154 AATATCCTTC 2145 T TCCTTC Sbjct: 106979 T-TCTCCTTC 106987 Score = 316 (47.4 bits), Expect = 0.00044, P = 0.00044 Identities = 132/188 (70%), Positives = 132/188 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCA---TCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CTT TTCA C TC TCA CTTCTTCTTCA TCTTCA CTTCTTCA CTTC TC C T Sbjct: 106615 CTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTCTTCAGCTT 106674 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTC 2212 C TCA C TCTTC TC C TC TCTTC C TCTTC CTT TTC GCTT TT TTC Sbjct: 106675 CTTCAGCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAG-CTTCTTCA-GCTTCTTCTTC 106732 Query: 2211 AGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGCAA 2153 AGC TT C CT C TT T CT C TCAG CTT T CTT AGCT T T CAGC Sbjct: 106733 AGC-TT--CTTCTTCAGCTTCTTCTTCTTCAG-CTTCTTCTTCAGCTTC-T-T-CAGCT- 106784 Query: 2152 TATCCTTCCAAAGC 2139 T T CTTC AGC Sbjct: 106785 TCTTCTTCTTCAGC 106798 Score = 313 (47.0 bits), Expect = 0.00060, P = 0.00060 Identities = 129/182 (70%), Positives = 129/182 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCA---TCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CTT TTCA C TC TCA CTTCTTCTTCA TCTTCA CTTCTTCA CTTC TC C T Sbjct: 106525 CTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTCTTCAGCTT 106584 Query: 2269 CCTCATC--CT-CTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTT 2213 C TCA C CT CTTCA CTTC TCA CTTC TC TC C TTCTT CTT CTT TT Sbjct: 106585 CTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGC-TTCTTCAGCTT-CTTCTT- 106641 Query: 2212 CAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAA 2153 CAGC T CA CT C TT GCT C TCAG CTT C TT AGCT T T CAGC Sbjct: 106642 CAGCTTCTTCAGCTTC---TTCAGCTTCTTCAG-CTT-C-TTCAGCTTCTTCTTCAGCT- 106694 Query: 2152 TATCCTTC 2145 T T CTTC Sbjct: 106695 TCTTCTTC 106702 Score = 305 (45.8 bits), Expect = 0.0014, P = 0.0014 Identities = 121/187 (64%), Positives = 121/187 (64%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTC-- 2269 CTT TTCA C TC TC TCTTC CTTC TCTTCA CTTCTTCA CTTC TC TC TC Sbjct: 106738 CTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAG 106797 Query: 2268 CT-CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTTGCTTTTTTC 2212 CT C TC CTTC TCTTC TCA CTTC TC TCTTC CTTCTT TTCTT TT T Sbjct: 106798 CTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCTTCAGCTTCTG 106857 Query: 2211 AGCCTTGA-CAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAA 2153 CTT A C CT C T TT GCT C TC T CTT AGCT T T C CA Sbjct: 106858 CTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCTTCTTCAG 106917 Query: 2152 TATCCTT 2146 TC TT Sbjct: 106918 CTTCTTT 106924 Score = 304 (45.6 bits), Expect = 0.0015, P = 0.0015 Identities = 108/159 (67%), Positives = 108/159 (67%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT C TCATC TC C TC TCTTC C TCATCT C TCATCT CCTC TCC Sbjct: 67586 CATCTTCCCCCTCATCTTCCCCCTCATCTTCCCCCTCATCTCCCTCATCTCCCTCATCCC 67645 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTC-T-TCCTTCTTTTTCTTGCTTTTTTC 2212 CCTCATC C TCATCT CCTCATCTTCC CCTC T TCC TC T TTC CT T TC Sbjct: 67646 CCTCATCTCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTC 67705 Query: 2211 AGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTT 2171 CCT C CTCCCT T T C CATC CT CTT Sbjct: 67706 --CCTCATCTTCTCCCTCATCTCCCTCATCTCCCTCATCTT 67744 Score = 300 (45.0 bits), Expect = 0.0024, P = 0.0023 Identities = 92/125 (73%), Positives = 92/125 (73%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTC-- 2269 CTT T C TCATC TC C TC TCTTC C TCATCT C TCATCTTCC CCTCCTC Sbjct: 68366 CTTCTCCCTCATCTTCCCCCTCGTCTTCCCCATCATCTCCCTCATCTTCCCCCTCCTCTT 68425 Query: 2268 -CTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAG 2210 CTCATC T TCATCTTCCTCATCTTCC CCTC TC TTC T TTC T C T TT A Sbjct: 68426 TCTCATCTTTCTCATCTTCCTCATCTTCCCCCTCATC-TTCCTCTTCATCCCTATTATAT 68484 Query: 2209 CCTTGA 2204 CTT A Sbjct: 68485 TCTTCA 68490 Score = 300 (45.0 bits), Expect = 0.0024, P = 0.0023 Identities = 112/157 (71%), Positives = 112/157 (71%), Strand = Minus / Plus Query: 2322 TTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC--CTCCT-C 2266 TTC TC TCA C TCTTCTTC C TCTTCA CTTCTTCA CTTC TC TC CT CT C Sbjct: 106682 TTCTTCTTCAGCTTCTTCTTCAGCTTCTTCAGCTTCTTCAGCTTCTTCTTCAGCTTCTTC 106741 Query: 2265 ATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCAGCC 2208 TC CTTC TCTTC TCA CTTC TC TC C TTCTT CTT CTT TT TTCAGC Sbjct: 106742 TTCAGCTTCTTCTTCTTCAGCTTCTTCTTCAGC-TTCTTCAGCTT-CTTCTTCTTCAGCT 106799 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCT 2166 T CA CT C T TT T C GC TC CTT CTT AGCT Sbjct: 106800 TCTTCAGCTTCTTCTTCTTCAGCTTCTT-CTT--CTTCAGCT 106838 Score = 298 (44.7 bits), Expect = 0.0029, P = 0.0029 Identities = 106/144 (73%), Positives = 106/144 (73%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CTT TT TC TCA C TCTTCTTCTTCA CTTC TCT CTTC T TCCT CT CT Sbjct: 106915 CAGCTTCTTTTTCTTCAGCTTCTTCTTCTTCAGCTTCTTCT-CTTCCTTCTCCTTCTTCT 106973 Query: 2269 CCTCATCCTC-TTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTG-CTTTTTTC 2212 CCTC T CTC TTC TCTT CT TCTTC TCCTCTTC TTCT TTTCTT C TT TTC Sbjct: 106974 CCTCCTTCTCCTTC-TCTTTCT--TCTTC-TCCTCTTCTTTCTCTTTCTTCTCCTTCTTC 107029 Query: 2211 AGC--CTTGACAACTCCCTTTTT-TGCTG 2186 C CTT CT C TT TT T CTG Sbjct: 107030 TTCTACTTCTTCTCTACGTTGTTCTTCTG 107058 Score = 297 (44.6 bits), Expect = 0.0032, P = 0.0032 Identities = 97/140 (69%), Positives = 97/140 (69%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TCATC C TCATCTTC C TCATCT C TC TCTTC C TC TC CCTC TC TCC Sbjct: 67792 TCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCC 67851 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCCTTGAC 2203 C TCATCT CCTCATCTTCC CCTC TC T C T TCT CT T TTC CCT G C Sbjct: 67852 CCCTCATCTCCCTCATCTTCCCCCTCATC-TCCCTCATCTCCCTCATCTTCCCCCTCGTC 67910 Query: 2202 AACTCCCTTTTTTGCTGCATC 2182 CTCCCT T T C CATC Sbjct: 67911 TTCTCCCTCATCTCCCTCATC 67931 Score = 292 (43.8 bits), Expect = 0.0054, P = 0.0054 Identities = 98/143 (68%), Positives = 98/143 (68%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TCATC C TCATCTTC C TCATCT C TC TCT C TC TC TCC CCTC TC TC Sbjct: 67855 TCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTCCCTCATCTTCCCCCTCGTCTTCT 67914 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCT-TCTTTT-TCTTGCTTTT-TTCAGCCTTG 2205 C TCATCT CCTCATCTTCC CCTC TC T TC T TCT CT T TTC CCT G Sbjct: 67915 CCCTCATCTCCCTCATCTTCCCCCTCGTCTTCTCCCTCATCTCCCTCATCTTCCCCCTCG 67974 Query: 2204 ACAACTCCCTTTTTTGCTGCATC 2182 C CTCCCT T T C CATC Sbjct: 67975 TCTTCTCCCTCATCTCCCTCATC 67997 Score = 292 (43.8 bits), Expect = 0.0054, P = 0.0054 Identities = 104/149 (69%), Positives = 104/149 (69%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCC 2271 CC C T T C TCATC TC C TC TCTTC C TCATCT C TCATCTTCC CCTC Sbjct: 67915 CCCTCATCTCCCTCATCTTCCCCCTCGTCTTCTCCCTCATCTCCCTCATCTTCCCCCTCG 67974 Query: 2270 TCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCT-TCTTTT-TCTTGCTTTT-T 2214 TC TC TCC CT CATCT CCTCATCTTCC CCTC TC T TC T TCT CT T T Sbjct: 67975 TCTTC-TCC-CT-CATCTCCCTCATCTTCCCCCTCGTCTTCTCCCTCATCTCCCTCATCT 68031 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATC 2182 TC CCT G C CTCCCT T T C CATC Sbjct: 68032 TCCCCCTCGTCTTCTCCCTCATCTCCCTCATC 68063 Score = 288 (43.2 bits), Expect = 0.0083, P = 0.0082 Identities = 100/145 (68%), Positives = 100/145 (68%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CT TTCATC C TCATCT C TC TC C TC TCTTCT C TC TC TCC CCTC T Sbjct: 68330 CTCCTTCATCTCCCTCATCTCCCTCATCTCCCTCGTCTTCTCCCTCATCTTCCCCCTCGT 68389 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCC 2208 C TCC C TCATCT CCTCATCTTCC CCTC TC TTCT T CTT CT T TTC C Sbjct: 68390 CTTCCCCATCATCTCCCTCATCTTCCCCCTCCTCTTTCTCAT-CTTTCTCATCTTCCTCA 68448 Query: 2207 T-TGACAACTCCCTTTTTTGCTGCATC 2182 T T C CTC TT T CT CATC Sbjct: 68449 TCTTCCCCCTCATCTTCCT-CTTCATC 68474 Score = 287 (43.1 bits), Expect = 0.0092, P = 0.0091 Identities = 101/151 (66%), Positives = 101/151 (66%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CT TCATC TC C TC TCT C TCATCTTC C TC TC C TC TC TCC Sbjct: 67814 CATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCCC 67873 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCT-TCTTTT-TCTTGCTTTT-TT 2213 CCTCATC C TCATCT CCTCATCTTCC CCTC TC T TC T TCT CT T TT Sbjct: 67874 CCTCATCTCCCTCATCTCCCTCATCTTCCCCCTCGTCTTCTCCCTCATCTCCCTCATCTT 67933 Query: 2212 CAGCCTTGACAACTCCCTTTTTTGCTGCATC 2182 C CCT G C CTCCCT T T C CATC Sbjct: 67934 CCCCCTCGTCTTCTCCCTCATCTCCCTCATC 67964 Score = 277 (41.6 bits), Expect = 0.026, P = 0.026 Identities = 117/182 (64%), Positives = 117/182 (64%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CT TCATC C TCATCTTC C TCATCT C TC TCTTC C TC TC CCT Sbjct: 67721 CATCTCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCT 67780 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTC-T-TCCTTCTTTTTCTTGCTTTTTTC 2212 C TC TCC C TCATCT CCTCATCTTCC CCTC T TCC TC T TTC CT T TC Sbjct: 67781 CATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTC 67840 Query: 2211 AGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGCAA 2153 CCT C C CCCT T T C CATC C TC T T CTC AT T C CA Sbjct: 67841 --CCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTC-ATCTCCCTCAT 67897 Query: 2152 TATCC 2148 TCC Sbjct: 67898 CTTCC 67902 Score = 275 (41.3 bits), Expect = 0.032, P = 0.032 Identities = 101/150 (67%), Positives = 101/150 (67%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCC 2271 CC C T T C TCATC TC C TC TCTTC C TCATCT C TCATCTTCC CCTC Sbjct: 67948 CCCTCATCTCCCTCATCTTCCCCCTCGTCTTCTCCCTCATCTCCCTCATCTTCCCCCTCG 68007 Query: 2270 TCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTG-CTTTTTTC 2212 TC TC TCC CT CATCT CCTCATCTTCC CCTC TC TTCT TC T C T TC Sbjct: 68008 TCTTC-TCC-CT-CATCTCCCTCATCTTCCCCCTCGTC-TTCTCCCTCATCTCCCTCATC 68063 Query: 2211 AGCCTTGACAACTCCCTTTTTTGCTGCATCA 2181 CC CA CTCCCT T T C C TCA Sbjct: 68064 TTCCCCCTCATCTCCCTCATCTTCCCCCTCA 68094 Score = 274 (41.1 bits), Expect = 0.036, P = 0.035 Identities = 220/357 (61%), Positives = 220/357 (61%), Strand = Minus / Plus Query: 2331 ACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC 2272 A CA CT TCATC TC C TC TCTT TCATCTT TC TCTTC TC TC TCC C Sbjct: 68397 ATCATCTCCCTCATCTTCCCCCTCCTCTTTCTCATCTTTCTCATCTTCCTCATCTTCCCC 68456 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTG-CTTTTT- 2214 CTC TC TCCTCTTCATC T AT TTC TC T TTC CT T CT CTTT T Sbjct: 68457 CTCATCTTCCTCTTCATCCCTATTATATTCTTCATTTTCTAGCTCATACTCATCTTTATC 68516 Query: 2213 TC-AGC--CT-TGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCT-TTAGCTCG-ATAT 2160 TC A C CT TG CA TC CTTTT T CT AT A TTT T TT T AT T Sbjct: 68517 TCTATCATCTCTGTCA--TCACTTTTAT-CT--ATTATTTTTTTATATTCTTTTTCATTT 68571 Query: 2159 GCA-GCAA-TATCCTTCCAAAGCAAAGGGAGGATAAAACAGTAGGGAAGAAAAAAAGATT 2102 GC GC T T CT CAAA C A GA AA CA TA A A A AGATT Sbjct: 68572 GCTTGCTTGTCTACTGTCAAAACCTGTCTAAGAGCAA-CACTATTTAC-AGATTCAGATT 68629 Query: 2101 AAGGAAAGAA-ATAGA-ACATGGCAGAACTTTATGAAAGAAA-TCAAGATTCTAGTTATA 2045 A A AA A A A A AT C A CTT A GAA A TCA AT CT G TATA Sbjct: 68630 CATCATCTAACACACATAAATTACC-ATCTTCA-GAATCTACCTCATCAT-CT-GATATA 68685 Query: 2044 CCAAAATATCA-CGT-ATCTGTAGATCCACAGCAAC-TCCAGAAATAACTAGAACTTCAA 1988 C AAA T TCA C T ATCT T ATC A A C C T A ATA C AG ACT CAA Sbjct: 68686 C-AAAGT-TCAACTTCATCT-TC-ATCAAAATCCTCATATTCAGATA-C-AGGACT-CAA 68738 Query: 1987 TAAATGAACA-TAA 1975 T ATGA CA TAA Sbjct: 68739 TTTATGATCAATAA 68752 Score = 272 (40.8 bits), Expect = 0.044, P = 0.043 Identities = 108/162 (66%), Positives = 108/162 (66%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTC--CTCC-TCCTCA 2265 TC TC TC C TC TCT C TCATCTTC C TC TC TCT CCTC CTCC TC TC Sbjct: 68005 TCGTCTTCTCCCTCATCTCCCTCATCTTCCCCCTCGTCTTCTCCCTCATCTCCCTCATCT 68064 Query: 2264 TCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCCTT 2206 TCC C TCATCT CCTCATCTTCC CCTC TC T C T TCTT C TT TC CC Sbjct: 68065 TCCCCCTCATCTCCCTCATCTTCCCCCTCATC-TCCCTCATCTTCCCATTCATCTTCCCC 68123 Query: 2205 GACAACTCCCTTTTTTGCTGCATCAGGCT--T-TCCTTTAGCT 2166 CA CTCCCT T T C CATC CT T TCCTT A CT Sbjct: 68124 CTCATCTCCCTCATCTCCCTCATCTCCCTCATCTCCTTCATCT 68166 Score = 268 (40.2 bits), Expect = 0.067, P = 0.065 Identities = 98/141 (69%), Positives = 98/141 (69%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC TC CATC TCT C TCATCTTC C TC TC T TC TC T CTC TC TCC Sbjct: 68386 TCGTCTTCCCCATCATCTCCCTCATCTTCCCCCTCCTCTTTCTCATCTTTCTCATCTTCC 68445 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTT-T-TTCTTGCTTTTTTCAGCCTTGA 2204 TC TC TC CCTCATCTTCCTC TC TCC T TT T TTCTT TTTT T AGC T A Sbjct: 68446 TCATCTTCCCCCTCATCTTCCTCTTCATCCCTATTATATTCTTCATTTTCT-AGC--TCA 68502 Query: 2203 CAACTCCCTTTTTTGCTGCATCA 2181 A CTC TTT T CT ATCA Sbjct: 68503 TA-CTCATCTTTAT-CTCTATCA 68523 Score = 268 (40.2 bits), Expect = 0.067, P = 0.065 Identities = 122/190 (64%), Positives = 122/190 (64%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCC 2271 CC C T TTC TC TCATC TC TCTTC C TC TC TCT CTTCATCT CCTC TC Sbjct: 68290 CCCTCGTCTTCCTCGTCATCCTCATCTTCCCCCTCGTCTTCTCCTTCATCTCCCTCATCT 68349 Query: 2270 TCCTCATC-CTCT--TCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTT--TCTTGCTTT 2216 CCTCATC C CT TC TCT CCTCATCTTCC CCTC TC T C T TCT CT Sbjct: 68350 CCCTCATCTCCCTCGTCTTCTCCCTCATCTTCCCCCTCGTCTTCCCCATCATCTCCCTCA 68409 Query: 2215 T-TTCAGCCTTGACAA-CTCC-CTTTTTTG-CTGCATCAGGCTTTCCTTT-AGCTCGATA 2161 T TTC CCT C CTC CTTT T CT C TCA CTT CC T A CT T Sbjct: 68410 TCTTCCCCCTCCTCTTTCTCATCTTTCTCATCTTCCTCAT-CTTCCCCCTCATCTTCCTC 68468 Query: 2160 TGCAGCAATAT 2150 T CA C TAT Sbjct: 68469 TTCATCCCTAT 68479 Score = 267 (40.1 bits), Expect = 0.075, P = 0.072 Identities = 99/148 (66%), Positives = 99/148 (66%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CT TCATC TC C TC TCT C TCATCT C TC TCTTC C TC TC CCT Sbjct: 67700 CATCTCCCTCATCTTCTCCCTCATCTCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCT 67759 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTC-T-TCCTTCTTTTTCTTGCTTTTTTC 2212 C TC TCC C TCATCT CCTCATCTTCC CCTC T TCC TC T TTC CT T TC Sbjct: 67760 CATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTC 67819 Query: 2211 AGCCTTGACAACTCCCTTTTTTGCTGCATC 2182 CCT C C CCCT T T C CATC Sbjct: 67820 --CCTCATCTTCCCCCTCATCTCCCTCATC 67847 Score = 267 (40.1 bits), Expect = 0.075, P = 0.072 Identities = 115/177 (64%), Positives = 115/177 (64%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC C TCATCTTC C TC TCT C TC TCT C TC TC TCC CCTC TC TCC Sbjct: 68242 TCGTCTCCCTCATCTTCCCCCTCGTCTCCCTCGTCTCCCTCATCTTCCCCCTCGTCTTCC 68301 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCTTGACA 2202 TC TCATC TC TC TC CCTC TCTTC T CTT TCT CT T TC CCT CA Sbjct: 68302 TCGTCATCCTCATCTTCCCCCTCGTCTTC-TCCTTCATCTCCCTCATCTC--CCT---CA 68355 Query: 2201 ACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAATATCCTTC 2145 CTCCCT T T CT C TCA CTT CC T G TC T CA CA T TCC TC Sbjct: 68356 TCTCCCTCGTCTTCTCCCTCAT-CTTCCCCCTCG-TCT-TCCCCATCA-TCTCCCTC 68408 Score = 265 (39.8 bits), Expect = 0.092, P = 0.088 Identities = 115/178 (64%), Positives = 115/178 (64%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC C TCATCTTC C TC TCT C TC TCT C TC TC TCC CCTC TC TCC Sbjct: 68212 TCGTCTCCCTCATCTTCCCCCTCGTCTCCCTCGTCTCCCTCATCTTCCCCCTCGTC-TCC 68270 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCCTTGAC 2203 CT C TCT CCTCATCTTCC CCTC TC TTC T TC T CT T TTC CCT G C Sbjct: 68271 -CT-CGTCTCCCTCATCTTCCCCCTCGTC-TTCCTCGTCATCCTCATCTTCCCCCTCGTC 68327 Query: 2202 AACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAATATCCTTCC 2144 CTCC T T T C CATC CT C T T CTCG T T C C ATC TTCC Sbjct: 68328 TTCTCCTTCATCTCCCTCATCTCCCT--CATCTCCCTCG-TCTTCTCCCTCATC-TTCC 68382 Score = 260 (39.0 bits), Expect = 0.16, P = 0.14 Identities = 102/152 (67%), Positives = 102/152 (67%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTC--CT 2273 CC C T T C TCATC TC C TC TCT C TC TC TCT C TCATCT CCTC CT Sbjct: 67675 CCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCTCCCTCATCTCCCTCATCT 67734 Query: 2272 CC-TCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTC-T-TCCTTCTTTTTCTTGCTTT 2216 CC TC TC TCC C TCATCT CCTCATCTTCC CCTC T TCC TC T TTC CT Sbjct: 67735 CCCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCA 67794 Query: 2215 TTTCAGCCTTGACAACTCCCTTTTTTGCTGCATC 2182 T TC CCT C C CCCT T T C CATC Sbjct: 67795 TCTC--CCTCATCTTCCCCCTCATCTCCCTCATC 67826 Score = 259 (38.9 bits), Expect = 0.17, P = 0.16 Identities = 105/150 (70%), Positives = 105/150 (70%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTC--CT 2273 CC CT AT C TC C TCATCT C TC TC C TCATC C TCATCT CCTC CT Sbjct: 67604 CCCCCTCAT-CTTCCCCCTCATCTCCCTCATCTCCCTCATCCCCCTCATCTCCCTCATCT 67662 Query: 2272 CC-TCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTC-T-TCCTTCTTTTTCTTGCTTT 2216 CC TC TC TCC C TCATCT CCTCATCTTCC CCTC T TCC TC T TTCT CT Sbjct: 67663 CCCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCTCCCTCA 67722 Query: 2215 TTTCAGCCTTGACAACTCCCTTTTTTGCTGCATCA 2181 T TC CCT CA CTCCCT T T C C TCA Sbjct: 67723 TCTC--CCT---CATCTCCCTCATCTTCCCCCTCA 67752 Score = 258 (38.7 bits), Expect = 0.19, P = 0.17 Identities = 98/148 (66%), Positives = 98/148 (66%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CT TCATC TC C TC TCT C TCATCTTC C TC TC C TC TC TC Sbjct: 67658 CATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCTC 67717 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTC-T-TCCTTCTTTTTCTTGCTTTTTTC 2212 CCTCATC C TCATCT CCTCATCTTCC CCTC T TCC TC T TTC CT T TC Sbjct: 67718 CCTCATCTCCCTCATCTCCCTCATCTTCCCCCTCATCTCCCTCATCTTCCCCCTCATCTC 67777 Query: 2211 AGCCTTGACAACTCCCTTTTTTGCTGCATC 2182 CCT C C CCCT T T C CATC Sbjct: 67778 --CCTCATCTTCCCCCTCATCTCCCTCATC 67805 Score = 240 (36.0 bits), Expect = 1.3, P = 0.72 Identities = 110/172 (63%), Positives = 110/172 (63%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CT TCATC C TCATCTT C TCATCT C TC TCT C TC TC T C CCT Sbjct: 68144 CATCTCCCTCATCTCCTTCATCTTTCCCCTCATCTCCCTCATCTCCTTCATCTTTCCCCT 68203 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCA 2211 C TC TCC CT C TCT CCTCATCTTCC CCTC TC T C T TCT CT T TTC Sbjct: 68204 CGTC-TCC-CT-CGTCTCCCTCATCTTCCCCCTCGTC-TCCCTCGTCTCCCTCATCTTCC 68259 Query: 2210 GCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGC 2158 CCT G C TCCCT T T C CATC C TC T T CTCG AT C Sbjct: 68260 CCCTCGTC---TCCCTCGTCTCCCTCATCTTCCCCCTCGTCTTCCTCGTCATCC 68310 Score = 237 (35.6 bits), Expect = 1.7, P = 0.82 Identities = 113/185 (61%), Positives = 113/185 (61%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA CT TCATC C TCATCTT C TC TCT C TC TCT C TC TC TCC CCT Sbjct: 68174 CATCTCCCTCATCTCCTTCATCTTTCCCCTCGTCTCCCTCGTCTCCCTCATCTTCCCCCT 68233 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCA 2211 C TC TCC CT C TCT CCTCATCTTCC CCTC TC T C T TCT CT T TTC Sbjct: 68234 CGTC-TCC-CT-CGTCTCCCTCATCTTCCCCCTCGTC-TCCCTCGTCTCCCTCATCTTCC 68289 Query: 2210 GCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAATA 2151 CCT G C C C T T C C TC CT CTT CT AT T C CA T Sbjct: 68290 CCCTCGTCTTCCTCGTCATCCTCATCTTCCCCCTCGTCTTCTCCTTCATCTCCCTCA-TC 68348 Query: 2150 TCCTTC 2145 TCC TC Sbjct: 68349 TCCCTC 68354 Score = 234 (35.1 bits), Expect = 2.4, P = 0.91 Identities = 140/230 (60%), Positives = 140/230 (60%), Strand = Minus / Plus Query: 2387 GTTGTGTACAGGGGGGTTAAATG-CTTTATAGAC-AAGAAAAA-AA--AAACTGCGCTAG 2333 GTTGTGTACA G TG CTTT AC AA A AA AA AAA G T G Sbjct: 67476 GTTGTGTACAATACTGAGTGTTGACTTTTGCAACCAATTATAATAATCAAAAGGATTTTG 67535 Query: 2332 AACCAACTTATTCATCATCATCATCTTCTTCTTCA-TCT--TCATCTTCTTCATCTTCCT 2276 AC A TT TT A CAT C TC T TCTT A TC TCATCT CTTCATCTTCC Sbjct: 67536 TACTACTTTGTT-AGCATTTCCTTCCTTATCTTTAGTCCCCTCATCTCCTTCATCTTCCC 67594 Query: 2275 CCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTT 2216 CCTC TC TC CCTC TC TC CCTCATCT CCTC TCT CCT C T C T T T Sbjct: 67595 CCTCATCTTCCCCCTCATCTTCCCCCTCATCTCCCTCATCTCCCT-CATCCCCCTCATCT 67653 Query: 2215 TT-TCAGCCTTGACAACT-CCCTTTTTTGCTGCATCAGGCTTTCCTTT-AGCTC 2165 TCA C CA CT CCC T T CT C TCA CTT CC T A CTC Sbjct: 67654 CCCTCATCTCCCTCATCTTCCCCCTCAT-CTCCCTCAT-CTTCCCCCTCATCTC 67705 >X64743;S37462 G.gallus RSFR mRNA Length = 801 Plus Strand HSPs: Score = 351 (52.7 bits), Expect = 2.7e-06, P = 2.7e-06 Identities = 91/113 (80%), Positives = 91/113 (80%), Strand = Plus / Plus Query: 2197 GGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGAT 2256 GGAGTTG CAAGGC GA AA AGCAAGAA AAGAAGGAAGA GAGGAAGATGAGGA GA Sbjct: 9 GGAGTTGCCAAGGCCGAGAAGAGCAAGAAGAAGAAGGAAGAAGAGGAAGATGAGGACGAA 68 Query: 2257 GAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAA-GATGAAGAAGAAGA 2309 GA GA GA GA GA GAGGA GAAGA GA GAAGA GAA G TGA G AG A A Sbjct: 69 GACGAAGAGGATGAAGAGGACGAAGAAGAGGAAGA-GAACGTTGAGGCAGGACA 121 Score = 234 (35.1 bits), Expect = 1.2, P = 0.69 Identities = 66/84 (78%), Positives = 66/84 (78%), Strand = Plus / Plus Query: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 AAGA AAGAAG AAGA AGGAAGA GAGGAAGATGA GA GA GA GA GAGGA GAA Sbjct: 27 AAGAGCAAGAAG-AAGA--AGGAAGAAGAGGAAGATGAGGACGAAGACGAAGAGGATGAA 83 Query: 2281 GATGAAGAAGATGAAGATGAAGAA 2304 GA GA GAAGA GA GA GA GAA Sbjct: 84 GAGGACGAAGAAGAGGAAGA-GAA 106 >U59897 Macropus robustus hypoxanthine phosphoribosyltransferase (Hprt) Length = 1228 Plus Strand HSPs: Score = 357 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06 Identities = 137/205 (66%), Positives = 137/205 (66%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAA-AGCAA 2222 GAG TA AGGA A TGA G AG A A AGG AG G AGG GA AA AG A Sbjct: 1023 GAGGTAGAGGAGAT--TGAAG-AGGATGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAG 1079 Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GA AAGA GGA GAGGAGGAAGA GAGGA GA GAAGAGGA GAGGAGGAGGA GA GA Sbjct: 1080 GAGGAAGA-GGAGGAGGAGGAAGAGGAGGAGGAAGAAGAGGAAGAGGAGGAGGAAGAGGA 1138 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCAGT 2342 GAAGA GA GA GA GA GAAGAAGA GA GA GA GA A G G TAG CAGT Sbjct: 1139 AGAAGAGGAGGAGGAAGAGGAAGAAGAGGAGGAGGAAGAGGAGGAGGAAGATAGGCCAGT 1198 Query: 2343 TTTTTTTTTCTTGTCTATAAAGCATTT 2369 T T T T TCTA A A CA TT Sbjct: 1199 TGAGCATATATC-TCTAGAGA-CAGTT 1223 Score = 334 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05 Identities = 106/145 (73%), Positives = 106/145 (73%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGA 2240 G TG AG A A AGGGAG GT AGG GA AAG AG A AG AGGAAGAGGA Sbjct: 1006 GGTGGAGGATGAGGAGGGAG--GTAGAGGA-GATTGAAG--AGGATGAGGAGGAAGAGGA 1060 Query: 2241 GGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGA 2300 GGA GA GAGGAAGA GA GAGGA GAGGAGGAGGAGGAAGA GA GA GA GAAGA GA Sbjct: 1061 GGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAAGAAGAGGA 1120 Query: 2301 AGAAGAAGATGATGATGATGAATAAG 2326 AGA GA GA GA GA GA GAA A G Sbjct: 1121 AGAGGAGGAGGAAGAGGAAGAAGAGG 1146 Score = 319 (47.9 bits), Expect = 0.00018, P = 0.00018 Identities = 125/181 (69%), Positives = 125/181 (69%), Strand = Plus / Plus Query: 2149 GATATTGCTG-CAT-AT-CGAGCTAAA--GGAAAGCCTGA-TGCAGCAAAAA-AGGGAGT 2201 GA ATTG TG CA AT C A C AAA GG AA CTG TG AG AA A AGG AG Sbjct: 806 GAAATTGATGACAAGATTCCATCAAAAAAGGTAAAACTGTCTG-AGGAAGATGAGGAAGA 864 Query: 2202 TGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA 2261 TG A G GA AA G AAGAA A GAAG A GAGGA GAAGATGA GA GA G AGA Sbjct: 865 TGAAGATGAGGAGGAA-G-AAGAAGAGGAAG-AGGAGGAAGAAGATGATGATGAGGCAGA 921 Query: 2262 GGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GGATGAGGAGGAG GAAGA G GA GA GA GA GA GAAGA GA GA GA GA GA Sbjct: 922 GGATGAGGAGGAGATAGAAGAGGTGGATGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGA 981 Query: 2322 ATAAG 2326 AAG Sbjct: 982 GGAAG 986 Score = 289 (43.4 bits), Expect = 0.0044, P = 0.0044 Identities = 89/121 (73%), Positives = 89/121 (73%), Strand = Plus / Plus Query: 2211 TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 T AAAAAAG A AAA G GA GA GA GA GA GA GAAGATGA GAGGA GA GA Sbjct: 827 TCAAAAAAGGTA-AAACTGTCTGAGGAAGATGAGGAAGATGAAGATGAGGAGGAAGAAGA 885 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA-ATAAGTTG 2329 GAGGA GA GA GAAGAAGATGA GATGA G AGA GATGA GA GA GA A AAG G Sbjct: 886 AGAGGAAGAGGAGGAAGAAGATGATGATGAGGCAGAGGATGAGGAGGA-GATAGAAGA-G 943 Query: 2330 GT 2331 GT Sbjct: 944 GT 945 Score = 283 (42.5 bits), Expect = 0.0084, P = 0.0084 Identities = 103/150 (68%), Positives = 103/150 (68%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AGGAA A GATG AG A AA A G AG G AGG GAA AA G A GA A G Sbjct: 858 AGGAAGATGAAGATG-AGGAGGAAGAAGAAGAGGAAGAGGAGGAAGAA-G-ATGATGATG 914 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 A GG AGAGGA GA GA GAG AGA GA G GGATGAGGAGGAGGAGGAAGA GA GA Sbjct: 915 A-GGCAGAGGATGAGGAGGAGATAGAAGAGGTGGATGAGGAGGAGGAGGAAGAGGAGGAG 973 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GA GA GA GAAGA GA GA GA GA G GA Sbjct: 974 GAGGAGGAGGAAGAGGAGGAGGAGGAGGTGGA 1005 Score = 280 (42.0 bits), Expect = 0.012, P = 0.012 Identities = 114/174 (65%), Positives = 114/174 (65%), Strand = Plus / Plus Query: 2147 AGGATATTGCTGCATATCGAGCTAAAG-GAAAGCCTGATGCAGCAAAAA-AGGGAGTTGT 2204 AGGA TG G A AT AG T A G G AAG GA G AG AA A AGG AG G Sbjct: 849 AGGAAGATGAGGAAGATGAAGATGAGGAGGAAGAA-GAAG-AGGAAGAGGAGGAAGAAGA 906 Query: 2205 CAAGGCTGAAAAA-AGCAAGAAAAAGA-AG-GAAGAGGAGGAAGATGAGGAAGATGAAGA 2261 A G TGA A AG A GA A GA A GAAGAGG GGA GA GAGGA GA GAAGA Sbjct: 907 TGATGATGAGGCAGAGGATGAGGAGGAGATAGAAGAGGTGGATGAGGAGGAGGAGGAAGA 966 Query: 2262 GGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 GGA GAGGAGGAGGAGGAAGA GA GA GA GA G GA G GA GATGA GA G Sbjct: 967 GGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGTGGAGGTGGAGGATGAGGAGG 1022 Score = 263 (39.5 bits), Expect = 0.072, P = 0.069 Identities = 77/106 (72%), Positives = 77/106 (72%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AG A AG AGGAAGAGGAGGA GA GAGGA GA GA GAGGA GAGGAGG GGAGG G Sbjct: 951 AGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGTGGAGGTGG 1010 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAA-GATGATGATGATGAATAAG 2326 A GA GA GA G AG T AG AGA GA GA GATGA GA AAG Sbjct: 1011 AGGATGAGGAGGGAGGTAGAGGAGATTGAAGAGGATGAGGAGGAAG 1056 Score = 261 (39.2 bits), Expect = 0.089, P = 0.085 Identities = 115/181 (63%), Positives = 115/181 (63%), Strand = Plus / Plus Query: 2154 TGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAG--G 2209 TG G A AT GAG A A GAA A GA G AG A AA AGG AG G AAG G Sbjct: 847 TGAGGAAGAT-GAGGAAGATGAAGATGAGGAGGAAGAAGAAGAGGAAGAGGAGGAAGAAG 905 Query: 2210 CTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAG 2268 TGA A AG AGA A GA GGA GAG GAAGA G GGA GA GA GAGGA GA Sbjct: 906 ATGATGATGAGGCAGAGGATGA-GGAGGAGATAGAAGAGGTGGATGAGGAGGAGGAGGAA 964 Query: 2269 GAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTT 2328 GAGGAGGAGGA GA GA GAAGA GA GA GA GA G GA G GA GATGA A G Sbjct: 965 GAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGTGGAGGTGGAGGATGAGGAGGGA 1024 Query: 2329 GGT 2331 GGT Sbjct: 1025 GGT 1027 >AF002279;M26184 Mus musculus B29 gene, 5' upstream region and partial cds. Length = 1303 Minus Strand HSPs: Score = 357 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06 Identities = 159/231 (68%), Positives = 159/231 (68%), Strand = Minus / Plus Query: 2364 CTTTATAGACAAGAAAAAAAAAACTGCGCT-AGAACC-A-ACTT-ATT--CATCATCATC 2311 CT T TA ACAAGAA AA A CTG G T AG CC A ACTT ATT C TC TC TC Sbjct: 126 CTCT-TATACAAGAAGAAGAGGGCTGTGTTGAGGGCCTAGACTTCATTTTCTTCCTCCTC 184 Query: 2310 ATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTC 2251 TC TC TC TC TCTT TCTTCTTC TCTTC TCCTCCTCCTC TCCTC TC TC C Sbjct: 185 TTCCTCCTCCTCCTCTTTCTCTTCTTCCTCTTCTTCCTCCTCCTCTTCCTCCTCCTCCCC 244 Query: 2250 CTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCA-GCCTTGACAACTCCCTTTT 2192 C C TC TC TCCTCTTCCT CT TTCTT CTTTTT CA G C GA TCCCT T Sbjct: 245 C-CTTCCTCTTCCTCTTCCTCCTCCTTCTT-CTTTTTCCAAGACAGGATT--TCCCTGTG 300 Query: 2191 TTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAG-CAATA-TC-CTTCCAAAGCAAAG 2135 T GC C T G CT TCCT A CTC T T AG C A A T C TC AA CA AG Sbjct: 301 TAGCC-C-T--GCCTATCCTGAAACTCACTCTATAGACCAGACTGGCCTCAAACTCATAG 356 Score = 281 (42.2 bits), Expect = 0.011, P = 0.011 Identities = 127/186 (68%), Positives = 127/186 (68%), Strand = Minus / Plus Query: 2308 CTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCT 2249 CTTC T TTC TC TC TCTTC TC TC TCCTC T CTC TC TCCTCTTC TC TCCT Sbjct: 166 CTTCATTTTCTTCCTCCTCTTCCTCCTCCTCCTCTTTCTCTTCTTCCTCTTCTTCCTCCT 225 Query: 2248 CATCTTCCTCCTCTTCCTTCTTTT-TCTTGCTTTTTTCAGCCTTGACAACTCCCTTTTTT 2190 C TCTTCCTCCTC TCC C TT TCTT CT TT C CCT C CT C TTTTT Sbjct: 226 CCTCTTCCTCCTCCTCCCCCCTTCCTCTTCCTCTTC-CT-CCTC--CTTCTTC--TTTTT 279 Query: 2189 GCTGCATCAGGCTTTCC-T-T-TAGCTC-GA-TATGCAGCAATATCCTTCCAAAGCAAAG 2135 C A CAGG TTTCC T T TAGC C G TAT C G AA TC TC A AG AG Sbjct: 280 CCAAGA-CAGGATTTCCCTGTGTAGCCCTGCCTATCCTGAAAC-TCACTCTATAGACCAG 337 Query: 2134 GGAGGA-TAAAAC 2123 GG T AAAC Sbjct: 338 ACTGGCCTCAAAC 350 >U19755 Mus domesticus thyroid transcription factor 1 gene, complete cds. Length = 11,172 Minus Strand HSPs: Score = 362 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06 Identities = 128/179 (71%), Positives = 128/179 (71%), Strand = Minus / Plus Query: 2360 ATAG-ACAAGAAAAAAAAAACTGCGCTAGAACCAACTTATTCATCATCATCATCTTCTTC 2302 A AG ACA AAA A AAACTGC T GA C ACTT TTC TC TC TC TCTTCTTC Sbjct: 10112 AAAGTACAC-AAAGACCAAACTGC--TGGA--CGACTTCTTCTTCTTCTTCTTCTTCTTC 10166 Query: 2301 TTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTC 2242 TTC TCTTC TCTTCTTC TCTTC TC TC TC TC TC TCTTC TCTTC TC TCTTC Sbjct: 10167 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 10226 Query: 2241 CTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCCTTGACAACTCCCTTTTTTGCTGCAT 2183 TC TCTTC TTCTT TTCTT CT T TC CCT C CTCC T TT CT C T Sbjct: 10227 TTCTTCTTC-TTCTTCTTCTT-CTCCTCCTCCTCCTCCTC--CTCCTCCTCTTCCTCCTT 10282 Query: 2182 C 2182 C Sbjct: 10283 C 10283 Score = 350 (52.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 174/273 (63%), Positives = 174/273 (63%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TCCTCCT Sbjct: 10196 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TCCTCCT 10254 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTT-CTTTTTCTTGCTTTTTTCAGCC 2208 C TCCTC TC TC TCCTC TC TCCT CT TCC CT TTCTT TTT TC CC Sbjct: 10255 CCTCCTCCTCCTCCTCCTCTTCCTCCTTCTTGTCCCCGCTCGTTCTTTTCTTTCTCCCCC 10314 Query: 2207 TTGACAACTCCCTT-TT-TTGCTGCATCAGGCTTTCCTTTAGCTCGATATGC-AGCAATA 2151 T C CT T TT TT CT CATC C CCTT TC T T C A C A A Sbjct: 10315 TCCTCTTCTGTTTCCTTCTTCCTTCATCTTTCCCCCCTTCCTTTCTCTTTACTATCTAAA 10374 Query: 2150 TCCTTCCAAAGCAAAGGGAGGATAAAACAGTAGGGAAGAAAAAAAGATTAAGGAAAG-AA 2092 C TT CA A C G T AA CA TA AAGAAAA A GA AG AAG AA Sbjct: 10375 AC-TTGCAGA-CTTTTTGTTTTTTAA-CA-TAAA-AAGAAAATA-GAAACAGCCAAGCAA 10428 Query: 2091 ATAGAACATGGCA-GAACTTTATGAA-AGA-AATCA-AGA 2056 AT AAC A GAA T T T AA AGA AA A AGA Sbjct: 10429 ATTCAACCCTTTACGAATTCTTTAAACAGAGAAGGACAGA 10468 Score = 339 (50.9 bits), Expect = 3.7e-05, P = 3.7e-05 Identities = 171/273 (62%), Positives = 171/273 (62%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TCCTCCT Sbjct: 10196 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TCCTCCT 10254 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTT-CTTTTTCTTGCTTTTTTCAGCC 2208 C TCCTC TC TC TCCTC TC TCCT CT TCC CT TTCTT TTT TC CC Sbjct: 10255 CCTCCTCCTCCTCCTCCTCTTCCTCCTTCTTGTCCCCGCTCGTTCTTTTCTTTCTCCCCC 10314 Query: 2207 TTGACAACTCCCTT-TT-TTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAATAT 2150 T C CT T TT TT CT CATC C CCTT TC T T C A Sbjct: 10315 TCCTCTTCTGTTTCCTTCTTCCTTCATCTTTCCCCCCTTCCTTTCTCTTTACTATCTAAA 10374 Query: 2149 CCTTCCAAAGCAAAGGGAGGATAAAACAGTAGGGAAGAAAAAAAGATTAAGGAAAG-AAA 2091 CTT CA A C G T AA CA TA AAGAAAA A GA AG AAG AAA Sbjct: 10375 ACTTGCAGA-CTTTTTGTTTTTTAA-CA-TAAA-AAGAAAATA-GAAACAGCCAAGCAAA 10429 Query: 2090 TAGAACATGGCA-GAACTTTATGAA-AGA-AATCA-AGA 2056 T AAC A GAA T T T AA AGA AA A AGA Sbjct: 10430 TTCAACCCTTTACGAATTCTTTAAACAGAGAAGGACAGA 10468 >Z98552 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from contig Length = 11,595 Plus Strand HSPs: Score = 262 (39.3 bits), Expect = 0.12, P = 0.11 Identities = 114/176 (64%), Positives = 114/176 (64%), Strand = Plus / Plus Query: 2152 ATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATG-CAGCAAA-AAAGGGA-GTTGTCAA 2207 ATT CT CA AT GA A GGA AAG ATG C CAAA AAA GA G TG A Sbjct: 8974 ATTTCTTCAGAT-GATGAAGGGGACAAGAAAAATGTCTCCAAACAAAATGATGATGATGA 9032 Query: 2208 GGCTGAAAAAAGCAA-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATG 2266 GG TGA A AA G A GA G A GA A GA GATGA GA GAT A GAGGATG Sbjct: 9033 GGATGATGATGATAATGGGGATGATG-ATGATAATGAGGATGATGATGATAATGAGGATG 9091 Query: 2267 AGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 A GA A G GGA GATGA GA ATGA GATGA GA A G GATGATGATGA TAA Sbjct: 9092 ATGATAATGGGGATGATGATGATAATGAGGATGATGATAATGGGGATGATGATGA-TAA 9149 Score = 255 (38.3 bits), Expect = 0.25, P = 0.22 Identities = 117/180 (65%), Positives = 117/180 (65%), Strand = Plus / Plus Query: 2152 ATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATG-CAGCAAA-AAAGGGA-GTTGTCAA 2207 ATT CT CA AT GA A GGA AAG ATG C CAAA AAA GA G TG A Sbjct: 8974 ATTTCTTCAGAT-GATGAAGGGGACAAGAAAAATGTCTCCAAACAAAATGATGATGATGA 9032 Query: 2208 GGCTGAAAAAAGCAA-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATG 2266 GG TGA A AA G A GA G A GA A GA GATGA GA GAT A GAGGATG Sbjct: 9033 GGATGATGATGATAATGGGGATGATG-ATGATAATGAGGATGATGATGATAATGAGGATG 9091 Query: 2267 AGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGA-A--GAAGATGATGATGATGAAT 2323 A GA A G GGA GATGA GA ATGA GATGA GA A G GATGATGATGAT AAT Sbjct: 9092 ATGATAATGGGGATGATGATGATAATGAGGATGATGATAATGGGGATGATGATGAT-AAT 9150 Query: 2324 AAG 2326 AG Sbjct: 9151 GAG 9153 Score = 244 (36.6 bits), Expect = 0.81, P = 0.55 Identities = 98/143 (68%), Positives = 98/143 (68%), Strand = Plus / Plus Query: 2196 GGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAG-GAAG-AGGAGG-AA-GATGAGG 2251 GGGAG CAA C GA AAAA AAGAAAA AAG G G AGGAG AA GAT A Sbjct: 8550 GGGAGAATCCAATTC-GATAAAAATAAGAAAAGTAAGTGTTGGAGGAGATAATGATAATA 8608 Query: 2252 AAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAA-GAT 2310 A GATGA GA AT A GA GA A GA GATGA GA ATGA GATGA AA AA GAT Sbjct: 8609 ATGATGATGATAATAATGATGATAATGATGATGATGATAATGATGATGAT-AATAATGAT 8667 Query: 2311 GATGATGATGAATAA-GTTGGTTCTA 2335 GATGAT AT AATAA G TG T TA Sbjct: 8668 GATGATAAT-AATAATGATGATGATA 8692 Score = 232 (34.8 bits), Expect = 0.0097, Sum P(2) = 0.0096 Identities = 524/934 (56%), Positives = 524/934 (56%), Strand = Plus / Plus Query: 1394 ATGAAAATGTTGGTAGTCACTTCAAGTCAAAA-AT-GAGCATTTTCAAATGGCTTGGCAT 1451 AT AA AT T TA TCA AA TCAAAA AT GA AT TCAAA TTG A Sbjct: 1927 ATAAAGATTATAATAATCAAAATAA-TCAAAATATTGAAAATAATCAAAATA-TTGAAA- 1983 Query: 1452 ACAGTACAAA-AA-CAGGCTAGACAAAGTAATATAGGCTATATTTTTCTTAGTCATA-TC 1508 A A T AAA AA CA TA AAA TAAT A ATATT TA TCA A T Sbjct: 1984 ATAATCAAAATAATCAAAATATTGAAAATAATCAAA---ATATTGAAAATAATCAAAATA 2040 Query: 1509 CTGAAACATTTATGTTCTTTTCCTTTAGATACTCAAAA-AACCACAGCA-TCAC--TAAG 1564 AAA AT AT T CC A ATA TCAAAA AACCA A A TCA TAA Sbjct: 2041 ACCAAA-ATA-ATCAAAATAACCAA-A-ATAATCAAAATAACCAAAATAATCAAAATAAC 2096 Query: 1565 TTAAATTA--CAAGTCTGCTGCTCTGTCCAG-TAAATTAATAAGATTA-AGGAAATC--T 1618 AAAT A CA G T C T GTCC G T A TT TAA A TA AGGA TC T Sbjct: 2097 CAAAATAATGCAGGAATACATATTAGTCCTGATGACTTTTTAA-AGTATAGGATGTCGCT 2155 Query: 1619 ATAACTCTTATAGTTCAGTAAA-T-TGAAATATTAAATACTTAATTTTCAGCTTTA-GTC 1675 A AA TT TA T CA T A T T AAA A A AT TT AT TT G A G Sbjct: 2156 AGAAAAATT-TA-TACAATTTACTATAAAAGAACACATTGTTTATATTATGAAAGATGAA 2213 Query: 1676 ATTCTGAAAAGTGTTTAT-TTCTAGATGTTTCT-TAACCTAATTGCATGTTTATTGACAA 1733 A AAAA T T AT TT T A G TC TA C T A A AT AA Sbjct: 2214 AAAAAAAAAACTTCTAATATTATTAAAGAATCCATATCATTAAAAAAGAAGCATACCAAA 2273 Query: 1734 ATTACCTTTTTTTTTTAAGACCACATT-TCCTACTAAGGATTAAGGTC-TGACAGTGTAA 1791 A A T TT T TAA A A AT T TA TAA GA A G T TGA A TG A Sbjct: 2274 AAGAG-TATTATAAATAACAATA-ATGATAATAATAATGAGGATGATGATGATAATG-AT 2330 Query: 1792 ACCTGTAGAGTGCTTTTTTGCATTCAGAAGGTGGCAGTGTCTACCCTTTAATCAAA-GTC 1850 A TGT GAGTG TT T G ATTC A G TG GTG TA T AA AAA G Sbjct: 2331 A--TGTTGAGTG--TTAT-GTATTCTAATGATGAT-GTGATTAAGAATAAAAGAAAAGAA 2384 Query: 1851 TCTACATTCTGGT-T-TTAATAGAG--T-TAGGATCTGGTAGATAATTGCACC-TCAATG 1904 TA AT G T TTA AGA T TA G T T TAG T T G A T AAT Sbjct: 2385 AATA-ATAAAGAAATATTAGAAGAACATGTAAGTTTTTCTAGTTTTTCGAATAATGAATA 2443 Query: 1905 -AG-GCATAACTTTGCAAATATTAGACTATGCCATTTCATG-AGTTATAGATTGTTATAA 1961 A GC T A T T AATA A A TAT CA TT AT A TTATA TT T A A Sbjct: 2444 TATTGC-TCATTCTTTTAATAGCATATTATTACAATT-ATCTAATTATATTTT-TAACAT 2500 Query: 1962 TGATCTTGTATTTTTATGTTCATTTATTGAAGTTCTAGTTATTTCTGGAGTT--GCTGTG 2019 TGA TGTA ATG AT T TT AA C AGT ATTT T GAGTT G TG Sbjct: 2501 TGAA--TGTAAGCAGATGGA-ATATTTTAAAAA-C-AGTAATTTATTGAGTTATGTTGAT 2555 Query: 2020 GATC-TACAGATACG-T-GATATTTTGGTATAACTAGAATCTTGATT-TCTTTCATAAAG 2075 GAT TACA TAC T GA ATT T TATA T GAA AT T T AT AG Sbjct: 2556 GATTATACAATTACTATAGA-ATTGTTTTATAGGTTGAAAAAATATAATAATATATTTAG 2614 Query: 2076 TTCTGC-CATGTTCTATTTCTTTCCTTAATCTTTTTTTCTTCCCTA-CTGTTTTATCCTC 2133 G CA T TA T C TA CTT TT T C A CTG T AT T Sbjct: 2615 CATAGAGCAAATCTTAGGAACT-CAGTATCCTTCGATTTTACAAAAGCTGCATGATGGTA 2673 Query: 2134 CCT-TTGCTTTGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAA 2192 T TTG TTT AAG ATA T T A A A AA G A G TGAT A AAA Sbjct: 2674 TATATTG-TTTAAAAG-ATAATAATAAAAAAAAAAACAATG--ACGG-TGATA-ATAAAA 2727 Query: 2193 AA-AGGGAGTTG-TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAG 2250 A G AG TG T A GG T A AAAA AA AAAAA AA GA G GA AA A AG Sbjct: 2728 GCCAAGAAGATGATGATGG-TAACAAAA--AA-AAAAACAATGACGGTGAT-AATAAAAG 2782 Query: 2251 G-AAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA-GAAGATGAAGATGAA-G--AAG 2305 AAGA GA GA GATG G A A A AA A AA GA G TGA AT AA G AAG Sbjct: 2783 CCAAGAAGATGATGATG-GTAACAAAAAAAAAAACAATGACGGTGATAATAAAAGCCAAG 2841 Query: 2306 AAGATGATGATGATGAATAA 2325 AAGATGAT ATG T AA AA Sbjct: 2842 AAGATGATTATGGT-AACAA 2860 Score = 231 (34.7 bits), Expect = 3.2, P = 0.96 Identities = 167/276 (60%), Positives = 167/276 (60%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCAT-ATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTG 2203 G A GATA T TG AT AT GAG AA GA A T ATG AG AA AGG G TG Sbjct: 9153 GGATGATAATTATG-ATGAT-GAGGATAATGATAAT-T-ATG-AG--AATGAGGATGATG 9205 Query: 2204 TCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 AA TG AAA AG A GA A AA A GA A GA GATGA GA AT A GA Sbjct: 9206 ATAATTATGCAAATGAGGATGATGAT-AATTATGAAAATGATGATGATGATAATTATGAA 9264 Query: 2263 GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 ATGA GA GA GA A ATGAA A GATGA GAT A A GAA ATGATGATGATGA Sbjct: 9265 AATGATGATGATGATAATTATGAAAATGATGATGATAATTATGAAAATGATGATGATGA- 9323 Query: 2323 TAAGT-TGGTTCTAGCGCAGTTTTTTTTT-TCTTG-TCTATAAAGCATT-TAACCCCCCT 2378 TAA T TG T G G G T T T T TG TC ATAA G AT TAA Sbjct: 9324 TAATTATGAAAATGGGGATGATGATAATGATAATGATC-ATAATG-ATGATAATAATGAC 9381 Query: 2379 GTACACAACTCACTCCTTTTAA-A-GAAAAAAATTGAA-ATGTAA 2420 G A A AA T A TC T T A A GA AAAAAT GAA AT AA Sbjct: 9382 GAAGAAAAAT-ATTCGTGTCATGATGATAAAAAT-GAACATACAA 9424 Score = 225 (33.8 bits), Expect = 5.9, P = 1.0 Identities = 113/185 (61%), Positives = 113/185 (61%), Strand = Plus / Plus Query: 2148 GGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCA 2206 GGAT TG TG ATA GAG A GA AA GATG G A AA G G TG A Sbjct: 9102 GGATGATGATG-ATAATGAGGATGATGATAATGGGGATGATGATGATAATGAGGATGATA 9160 Query: 2207 AGGCTGAAAAA-AGCAAGAA-A-AAGAAGGAAGAGGAGGAAGATGAGGAAGATG-AA--G 2260 A TGA A AG A A A AA A GA A GAGGA GATGA A ATG AA G Sbjct: 9161 ATTATGATGATGAGGATAATGATAATTATGAGAATGAGGATGATGATAATTATGCAAATG 9220 Query: 2261 AGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 AGGATGA GA A A GAA ATGA GA GATGA AT A GAA A GATGATGATGAT Sbjct: 9221 AGGATGATGATAATTATGAAAATGATGATGATGATAATTATGAAAATGATGATGATGATA 9280 Query: 2321 AATAAG 2326 A TA G Sbjct: 9281 ATTATG 9286 Score = 200 (30.0 bits), Expect = 0.0097, Sum P(2) = 0.0096 Identities = 82/117 (70%), Positives = 82/117 (70%), Strand = Plus / Plus Query: 2222 AGAAAAAGA-AGGAA-GAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGA 2279 AGA AA GA A AA GA GA GA AT A GA GAT A GA GATGA GA A GA GA Sbjct: 8595 AGATAATGATAATAATGATGATGATAATAATGATGATAATGATGATGATGATAATGATGA 8654 Query: 2280 AGATGAAGAA-GATGAAGATGAAGAAGAAGATGATGATGATGAATAA-GTTGGTTCTAGC 2337 GAT AA AA GATGA GAT AA AA AA TGATGATGAT AAT A G T GTT T C Sbjct: 8655 TGAT-AATAATGATGATGAT-AATAATAA--TGATGATGAT-AATGATGATAGTTATGAC 8709 Query: 2338 G 2338 G Sbjct: 8710 G 8710 Score = 148 (22.2 bits), Expect = 1.6, Sum P(2) = 0.79 Identities = 60/92 (65%), Positives = 60/92 (65%), Strand = Plus / Plus Query: 2235 AGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGA 2294 AGA GA GAAG GA AAGA AA G T A A A GA GATGA GA GATGA Sbjct: 8982 AGATGATGAAGGGGAC-AAGAAAAAT-GTCTCCAAACAAA-ATGATGATGATGAGGATGA 9038 Query: 2295 AGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GATGA A G GATGATGATGAT AAT AG Sbjct: 9039 TGATGATAATGGGGATGATGATGAT-AATGAG 9069 Score = 135 (20.3 bits), Expect = 5.5, Sum P(2) = 1.0 Identities = 71/114 (62%), Positives = 71/114 (62%), Strand = Plus / Plus Query: 2245 GATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAA 2304 GATGAG A G A GA GAT A A A GAAGAT A G A AT A AT AA AA Sbjct: 8866 GATGAGAATGTACATGAAGATTTACAAAATTATGAAGATTATGTAAATAATAAT-AATAA 8924 Query: 2305 GAAGA-TGATGATGATGAAT-AAGTTGGTTCTAGCGC-AGTTTTTTTTTTCTTGTCT 2358 AA A TGATGATGAT AAT AAG G TA C AGTT TT T T TT TCT Sbjct: 8925 TAATAATGATGATGAT-AATGAAGAGGAGAGTAACAATAGTTGTTATATAATT-TCT 8979 Minus Strand HSPs: Score = 362 (54.3 bits), Expect = 3.4e-06, P = 3.4e-06 Identities = 488/825 (59%), Positives = 488/825 (59%), Strand = Minus / Plus Query: 2153 ATATCCTTCCAAAGCAA-AGGGAGGA-TAAAACAGTAGGGAAGAAAAAAAGATTAAGGAA 2096 A ATC CCAAA AA A GA T A A AG GAAGAAAA A ATT AG A Sbjct: 7708 AAATCTGACCAAATTAATAATGAAACCTTAGAAAGATATGAAGAAAATATTATTCAGAAT 7767 Query: 2095 AGAAATAGAACATGGCAGAACTTTATGAAAGAAATCAAGATTCTAGTTA-TACCAA-AAT 2038 A A ATA A ATG A AAC T A GA A AATCAAG T TAG A TA AA AA Sbjct: 7768 ATATATACTA-ATG--ATAACGT-A-GATAATAATCAAG-TCATAGAAAATATAAATAAA 7821 Query: 2037 ATCACGTATCTGTAGATCCACAGCAACTCCAGAAATAACTA-GAACTTCAATAAATGAAC 1979 AT C TAT T GAT ACA A T A AAATAA A GAACT AA AAATGAAC Sbjct: 7822 ATT-CTTAT-TAAGGATAAACAAGATATT-ATAAATAATGACGAACTA-AA-AAATGAAC 7876 Query: 1978 ATAAAAATACAAGATCATTATAACAATCTATAACTCAT-GAAATGGCATAGTCTAATATT 1920 ATAA AAT AA ATTA A AAT AT C CAT GAAA GC A TAA TT Sbjct: 7877 ATAATAATTTAATTAGATTA-ATTAATGAAT--C-CATAGAAAATGCTCA---TAACCTT 7929 Query: 1919 TGCAAA-GTT-ATGC-CTCATTGAGGTGC-AATTATCTACCAGATCCTAACTCTATTAAA 1864 G AAA GTT ATG C A TGA TGC AAT AT TA A AT TAA T TA AAA Sbjct: 7930 -GAAAATGTTTATGTACAAAATGA--TGCTAATAATTTAATAAATGATAA-TATAAAAAA 7985 Query: 1863 ACCAGAATG--T-AGAGACTTTGATTAAAGGGTAGACACTGCCACCTTC-T-GAAT-GCA 1810 AGAA T A A A TTGAT AAA GG A A TG C T T GAAT GCA Sbjct: 7986 GGAAGAAACACTCACATATGTTGATGAAAAGG-ATAATGTGTCGAATGAATCGAATAGCA 8044 Query: 1809 AAAAAGCAC-TC-TACAGGTTTACACTGTCAGACCTTAATCCTTAGTAGGAAATGTGGTC 1752 AA G T TA A A AC G AGA T AAT C AG AAATG C Sbjct: 8045 AATGTGATGATGATAAAAAGGAAAAC-GA-AGATAT-AATACA-AGCGAAAAATGAAAAC 8100 Query: 1751 T-TAAAAAAAAAAGGTAATTTGTCAATAAACATGCAATTAGGTTAAGA-AACATCTAGAA 1694 T T AA A A T TG AATAA ATG ATTA T A GA AA AT TA A Sbjct: 8101 TATCCTGTAAGCACACATTATGATAATAATGATGATATTAA-TAAGGATAATAT-TAATA 8158 Query: 1693 AT-A-AACACTTTTCAGAATGACTAAAGCTGAAAAT--TAA-G-TA-T-TTAATATTTC- 1643 AT A AA A T T A AAT A TAA G TGA AAT TAA G TA T TTAATA T Sbjct: 8159 ATGATAATAATAATGATAAT-ATTAATGATGATAATAATAATGATAATATTAATAATGAT 8217 Query: 1642 AATT-TACTGA-ACTAT-AAGAGTTATAGATTTCCTTAATCTTATTAATT-TACTGGACA 1587 AAT TA TGA A TAT AA A T ATA AT T TAAT TA TA T TA TG A A Sbjct: 8218 AATAATAATGATAATATTAATAATGATA-ATATTAATAATGATAATATTAATAATG-ATA 8275 Query: 1586 GAGCAGCA-GACTTGTAATT-TAACT-TAGTGATGCTGTGGTTT-TTTGAGTATCTAAAG 1531 A A A GA T TAAT T A TAGT AT TG GGTTT TTTG G T TA Sbjct: 8276 -ATAATAATGA-TAATAATAATGATAATAGTAATAATG-GGTTTGTTTGTGAGT-TATCA 8331 Query: 1530 GAAAAGAACATAAATGTTTCAGGATATGACTAAGAAA-AATATAGCCTATATTACTTTGT 1472 AAA A A AT TTT A ATAT A TAA AA A AG TA TT C G Sbjct: 8332 TCAAATATAAACGAT-TTTAATAATAT-ATTAAATGTTAACAAAGA-TAACTTCCAAGGC 8388 Query: 1471 CTAGCCTGTTTTTGTACTGTATGC-CAAGCCATTTGAAAATGCTCATTTTTGACTTGAAG 1413 TA T TA T T T CAA CC TTT A A T T ATT T GA G A Sbjct: 8389 ATAAATAAATCAAATAATTTCTCAACAAACC-TTTCAGAGTA-TAATTAT-GATGCGTA- 8444 Query: 1412 TGACTACCAACATTTTCATGAA-CTTCAAGATACTGGGGAATA-ACAAAAC--CAACATA 1357 TG TA AA AT TC GAA C AAG T CT GGAA A A AAAAC CAA ATA Sbjct: 8445 TG--TAA-AA-ATAGTC--GAAGCGGGAAG-TGCTTTGGAAAATAAAAAACAACAAGATA 8497 Query: 1356 AATGTACACAGCCTTTGTCTGAGTCTGA 1329 AA A A TTT TC GA TC GA Sbjct: 8498 AAAAAAGGAAATATTTTTCAGATTCGGA 8525 Score = 317 (47.6 bits), Expect = 0.00038, P = 0.00038 Identities = 385/658 (58%), Positives = 385/658 (58%), Strand = Minus / Plus Query: 2131 GGATAAAACAGTAGGGAAG-AAAAAAAGATTAAGGAAAGAAAT-AGAACATGGCAGAACT 2074 G A AAA A T G AAG AAAAAAAGATTAA AA AAAT AGAA AT AA Sbjct: 3343 GAACAAATTAAT-GAAAAGGAAAAAAAGATTAATATAATAAATGAGAA-ATATTT-AATA 3399 Query: 2073 TTATGAAAG-AA-ATCAAGATTCTAGTTATACCAAAATATCACGTATCTGTAGATCCACA 2016 TTA AAAG AA AT AAGA T T ATA AAAATAT A TAT T A A A Sbjct: 3400 TTAGAAAAGGAATATGAAGAATATCAAAATA--AAAATAT-ATTTATTAATGCACAAATA 3456 Query: 2015 GCAACTCCAGAAATAACTAGAACTT-CAATAA-ATGAACATAAAAATACAAGATCATTAT 1958 G AA T AGAAA AA AGAA CAAT A A GAA A AA ATACAA A AT AT Sbjct: 3457 GAAAATTTAGAAA-AAG-AGAAAAAACAATTACAAGAAGA-AATTATACAAAAAGAT-AT 3512 Query: 1957 AA-CAATCTATAACTCA-TGAAATGGCATAGTCTAATATTTGCAAAGT-TATGCCTCATT 1901 A CAAT TA AA T A TGAAA AT GT ATATT AAA T TATG A Sbjct: 3513 GATCAATGTAAAATTGAATGAAAAAA-ATTGTG--ATATTATAAAAATATATGAAAAA-- 3567 Query: 1900 GAGGTGCAATTATCTACC-AGATCCTAACTCTATTAAAACCAGAATG-TAGAGACTTTGA 1843 GA CAAT AT TAC A AT T AC A A AA A A T TA A TT A Sbjct: 3568 GAAAAACAAT-ATTTACATACATTATTACAAGAAAATAAAGATAGTCATAATTATTTAAA 3626 Query: 1842 TTAAAGGGTAGACACTGCC--ACCTTCTGAATGCAAAAAAGCACTCT-A-CAGGTT-TA- 1789 A A T GA A T A TT TGAATG AAAA A T T A CA G T TA Sbjct: 3627 AGATAAATTTGAAAATTTATTAAATT-TGAATGAAAAATTAAAATATGATCATGATATAT 3685 Query: 1788 CACTGTCAGACCTTAATCC-TTA--GT-AGGA-AATGTGGTCTTAAAAAAAAAAGGTAAT 1734 CA T A T AAT C TTA GT AG A AA G TAA AAAAAAA TA Sbjct: 3686 CATTAAATAAAATAAATACATTATGGTTAGAAGAAAAAGAAAATAATAAAAAAAA-TACA 3744 Query: 1733 TTGTCA-ATAAACA-TGCAATTAGGTTAAGA-AACA-TCTAGAAATAAACACTTTTCAGA 1678 TT CA AT AA A T AA AG T AA A AA A TCTA A TAAA A T AGA Sbjct: 3745 TTC-CATATGAATAATTTAAG-AGTTGAAAATAATAATCTATTATTAAAAA--TGAAAGA 3800 Query: 1677 ATGACTAAAGCTGAAAATTAAGTATT-TAATATTTCAATTTACTGAACTA-TAAGAGTTA 1620 AT AC AAA T AA AT AA TATT TAA A AA TTA TGAA A TAA A A Sbjct: 3801 ATTACAAAA--TAAATAT-AA-TATTATAAAAAAGGAACTTAATGAAAGAATAAAACAAA 3856 Query: 1619 TAGATTTCCTTAATCTTATTAATTT-ACTGGA--CA-GAGCAGCAGACTTGTAATTTAAC 1564 T AT T T A TA T TT AC A C GAG AG A A T G A T AA Sbjct: 3857 TTAATGTGTTCAGAAATAATGTTTCGACATTATCCTTGAG-AG-ATAATAGAAGTACAAG 3914 Query: 1563 TTAGTG-ATGCTGTGGTTTTTTGAGTATCTAAAGGAA-AAGA-ACATAAATGTTTCA-GG 1508 T AT C G T T A TAT TA A GAA AA A ACAT GTTT A GG Sbjct: 3915 AGGTTCTATTCATCAGATAAATAA-TATGTATATGAATAATACACATCTGGGTTTTATGG 3973 Query: 1507 ATATGACTAAGAAAAATATAGCCTATAT 1480 T CTAA A AAATA A TATAT Sbjct: 3974 GTGCATCTAAAATAAATA-ATAATATAT 4000 Score = 285 (42.8 bits), Expect = 0.014, Sum P(2) = 0.014 Identities = 419/727 (57%), Positives = 419/727 (57%), Strand = Minus / Plus Query: 2132 AGG-ATAAAACAGTAGGGAAGAAAAAAAGAT-TA-AGGAAAGAAATAGAACATGGC-AGA 2077 AGG ATAA ACA A G A GAAAA AA T T AG A AAA A T G A A Sbjct: 1173 AGGCATAACACAA-ATG-ATGAAAATAATTTATCCAGTCTAAAAACATCCTTTAGATATA 1230 Query: 2076 ACTTTATGAAAGAAATCAAGATTCTAGTTATACCAAAATATCACGTATCTGTAGATCCAC 2017 A TTA AA AAATC G T G AT CCA A ATCA G ATCT A TC C Sbjct: 1231 AAATTAATAAT-AAATCTGGGAAATCGCGAT-CCATCAAATCAAG-ATCTC-ATTTCT-C 1285 Query: 2016 AGCAACTCCAGAAATAACTAGAACTTCAA-TAAATGAACATAAAAATACAAGATCATTAT 1958 G A C A AATA T AA TCAA TAA T A C A A AT AAGATCATTAT Sbjct: 1286 TGGAGA-CAATGAATATATTCAAGATCAACTAAGTAATCG-AGAGATGAAAGATCATTAT 1343 Query: 1957 AAC-A-ATCTATAACTCATGAA-ATGGCAT--AGTC-TAAT-ATTTGCA-AAGTTATGCC 1906 AA A ATC A A T AT A AT CAT A TC TAAT A T CA AA TTAT Sbjct: 1344 AATTATATCGAAAGGT-ATAATCATT-CATCTAATCGTAATGACATACATAATTTATAT- 1400 Query: 1905 TCAT-TGAGGTGCAATTATCTACCAGATCCTAACTCTATTAAAACCAGAATGTAGA-GAC 1848 T AT TG G G AA A TA CA AT TAA T AT A A A ATG GA GA Sbjct: 1401 T-ATATG-GAAGAAA--ACGTATCACATAATAA-TA-ATAAGAGTGATTATGATGAAGAT 1454 Query: 1847 TTTGATTAA-AGGGTAGACACTGCCACCTTCTGAATGCAAAAAAGCAC-TCTACAGGTTT 1790 GAT A AG TA A T A TT AAT AAAAAA A T TA A TT Sbjct: 1455 GGAGATGCAGAGAATAATAATTATTATATTAA-AATAAAAAAAAATAAATATAAAAAATT 1513 Query: 1789 ACACTGTC-AGACCTTAATCCTTAGTAGGAAATGTGGTC-TTAAAAAAA--AAAGGTAAT 1734 A AC T A TAA CT A G AAAT C TTAA A A AAA G AAT Sbjct: 1514 AAACGATTTATTAAATAAAGCTCAAATGAAAATCATAACATTAACACGAGCAAATGAAAT 1573 Query: 1733 TTGTCAATAAACAT-G--CAATTAGGTTAAGAA-ACATCTAGAAATAAAC-ACTTTTCAG 1679 T T AA AAA AT G CAA TA TTAA AA ACAT TA AA A A AC T A Sbjct: 1574 GTTTGAA-AAATATTGTTCAAATA--TTAAAAACACAT-TAATAAGAGATGACATGAAAA 1629 Query: 1678 AATG-ACTAAAGCTGAAAATTAAGT-ATTTA-ATATTTCAATTTACTGAACTATAAGAGT 1622 AAT A AAA C GA A T AAG AT TA ATATTT A T A TGAA A A A Sbjct: 1630 AATTTAGAAAACCAGATA-T-AAGCGATGTACATATTTTACATAA-TGAAAAAATATATC 1686 Query: 1621 TATAGATTTCCTTAATCTTATTAATTTA-CTGGACAGAGCAGCAGACTTGTAATTTAACT 1563 TA A A T TTAA T A AATT A CT A A A AG A A TTG AA AA T Sbjct: 1687 TAGAAAAATTATTAAA-TGAAAAATTAAACTATATAAA--AG-ATA-TTGAAAAAAAA-T 1740 Query: 1562 TAGTGATGCTGTGGTTTTTTGAGTATCTAAAGGAAAAGAACATAAATGTTTCAGGATATG 1503 TAG ATG T T T A TA TAAA AAAGAA ATA AT T T A A A G Sbjct: 1741 TAG--ATGAATTACATGGTGTAATAAATAAAAATAAAGAAGATATATATAT-ATTACAAG 1797 Query: 1502 ACTAAGAAAAATATAGCCTATATTACTTTGTCTAGC-CTGTTTTTGTACTGTATGCCAAG 1444 TA GAAAAA A A TA ATTA TG T C CTGT T TG A T A AA Sbjct: 1798 --TA-GAAAAACAAACATTA-ATTAAGGTGATTTCCTCTGTATATG-ATTACACAAAAAT 1852 Query: 1443 CCATT-TGAAAATGCTCATTTTTGACTTGAAGTGACTAC 1406 A TGAAAAT T AT TTT A TGAA T AC AC Sbjct: 1853 GGAGAGTGAAAATCAT-ATATTTAAAATGAA-T-ACCAC 1888 Score = 142 (21.3 bits), Expect = 0.014, Sum P(2) = 0.014 Identities = 184/321 (57%), Positives = 184/321 (57%), Strand = Minus / Plus Query: 795 TATTTAATTTATACTAGCTAGAACCCTAGATGAACATTCTACAATTACACTATTTCAAAG 736 TATTT A T AT TA A A TA AT A T TACAAT A A TTTCA A Sbjct: 3015 TATTTGAATCATTTTATAAATATAAATA-ATATATTTAGTACAATAATAAGTTTTCATAT 3073 Query: 735 GGATAGTATTTTTCAAGAA-ATAAAAAGATCAA--AAGGAGATAC--A-CTGGGCAAAGG 682 ATA TATT A AA ATAAAAAG T A AA GA AT A CTG CAA Sbjct: 3074 ACATAATATTGAAGATAAATATAAAAAGGTGTATGAAAGATATTTTAATCTGTTCAACTT 3133 Query: 681 AGACC--A--AATGTCTAATT--CAAATGCTCTGGGAACACTCCCACCCAACAGGAATTT 628 A A AATGT A TT CA TG T T AA AC A A A GA TT Sbjct: 3134 TAATTTTAGTAATGTAGAGTTATCATTTGATTTATTAATACGTAGATTTGATAAGA-TTC 3192 Query: 627 TATACTATTTAAATATAACCAATATGAACAAGTATTAGCTAAGAAACTTTGATTGTACAT 568 T T T TT AA A AA AATATGAACAA TATTAG AAGAAA TT AT G A A Sbjct: 3193 T-TCGT-TTNAACCAAAA--AATATGAACAATTATTAG--AAGAAAATT--AT-GAAAAA 3243 Query: 567 TTACACTCTAAAC-TGACAAAGTAGCTTGCTAAATTTCTCTCAGATTCTACTGTA-AAAC 510 TA A TAAA TGA AA G AG T CT A T CT A A A T TA AAA Sbjct: 3244 ATAAAAAATAAAAATGAAAAGGAAGAATACTTACATGCTTGTATAAAAGAAT-TAGAAAT 3302 Query: 509 GTGTCTGGGAAG-TA-AA-AACAGGCAAGATACT 479 G T T G AG TA AA AAC G AA ATA T Sbjct: 3303 GAATTTAGAGAGATATAATAACGAGAAA-ATAAT 3335 >U07886 Rattus norvegicus clone 15 polymeric immunoglobulin receptor mRNA, Length = 1223 Plus Strand HSPs: Score = 355 (53.3 bits), Expect = 3.7e-06, P = 3.7e-06 Identities = 97/124 (78%), Positives = 97/124 (78%), Strand = Plus / Plus Query: 2207 AGGCTGAAAA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AGG GA AA AAG AAGAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA Sbjct: 807 AGGAGGAGAAGAAG-AAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 864 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AA Sbjct: 865 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 924 Query: 2326 GTTGG 2330 TT G Sbjct: 925 ATTAG 929 Score = 343 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05 Identities = 115/161 (71%), Positives = 115/161 (71%), Strand = Plus / Plus Query: 2166 AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGA 2224 AGC AGGA AAG GA CAG AA A GGAG G CA GG GA A A AAG Sbjct: 678 AGCAGGAGGAGAAGGAGGAA-CAGGAACAGGAGGAGGAG-CAGGGG-GAGGAGAAAAAGG 734 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AG AGGA GAGGAGGAAGA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA G Sbjct: 735 AGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 794 Query: 2285 AAGAAGATGAAGATGA--AGAAGAAGATGATGATGATGAATAAG 2326 A GA GA GA GA GA AGAAGAAGA GA GA GA GAA AAG Sbjct: 795 AGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAG 838 Score = 337 (50.6 bits), Expect = 2.5e-05, P = 2.5e-05 Identities = 145/214 (67%), Positives = 145/214 (67%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAAA 2228 AGGA AG GA G AG A A GGAG G A G GAA AA AAG AAGAA AA Sbjct: 780 AGGAGGAGGAGGAGG-AGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAG-AAGAAGAA 837 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGA Sbjct: 838 GAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 896 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGAT-GAATAAGTTG-GTTCTAGCGCAGTTTTT 2346 AGA GAAGA GAAGAAGAAGA GA GA T GAA AAG G AG CA T Sbjct: 897 AGAAGAAGAAGAAGAAGAAGAAGAAGAAATTAGAAGAAGAAAAGAAGAAGGACAAATGGC 956 Query: 2347 T-TTTTCTTGTCTATAAAGCATTTAACCCCCCTGT-ACACA 2385 T TTTTCT GTCT A C TTT CC CCTGT AC CA Sbjct: 957 TCTTTTCTGGTCTC---ACCTTTTC-CCTTCCTGTCACTCA 993 >M73820 Mouse sex-limited protein (SlpA) gene, exons 24-41, and cytochrome Length = 12,544 Plus Strand HSPs: Score = 361 (54.2 bits), Expect = 3.7e-06, P = 3.7e-06 Identities = 119/165 (72%), Positives = 119/165 (72%), Strand = Plus / Plus Query: 2165 GAGCTAAAG-GAAAG-CCTGATG-CAGCAAAA-AAGGGAGTTGTCAAGGCTGAAAAAAGC 2220 G GCTA A G AAG CCT ATG CAG A A AAGGGAG G A G GAA AA G Sbjct: 8156 GGGCTACATAGTAAGACCT-ATGTCAGAGAGAGAAGGGAGAGGGGAGAGAAGAAGAA-GA 8213 Query: 2221 A-AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGA 2279 A AG A AG AGGA GAGGAGGA GA GAG AAG GAAGA GA GA GA GA GA GA Sbjct: 8214 AGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAAGGAGAAGAAGAAGAAGAAGAAGAAGA 8273 Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 8274 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 8320 Score = 357 (53.6 bits), Expect = 5.7e-06, P = 5.7e-06 Identities = 121/168 (72%), Positives = 121/168 (72%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGCA 2221 GAG AAG A AAG GA G AG A AA A G AG G A G GAA AA AAG A Sbjct: 8249 GAGAAGAAGAAGAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-A 8306 Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAG-ATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 AGAA AAGAAG AAGA GA GAAG A GA GAAGA GAAGA GA GA GA GA GA GAA Sbjct: 8307 AGAAGAAGAAG-AAGAAGAAGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 8365 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGT-TGG 2330 GA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG TGG Sbjct: 8366 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTGG 8416 Score = 347 (52.1 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 119/168 (70%), Positives = 119/168 (70%), Strand = Plus / Plus Query: 2165 GAGCTAAAG-GAAAG-CCTGATG-CAGCAAAA-AAGGGAGTTGTCAAGGCTGAA-AA-AA 2218 G GCTA A G AAG CCT ATG CAG A A AAGGGAG G A G GAA AA AA Sbjct: 8156 GGGCTACATAGTAAGACCT-ATGTCAGAGAGAGAAGGGAGAGGGGAGAGAAGAAGAAGAA 8214 Query: 2219 GCA-AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAG 2277 G AG A AG AGGA GAGGAGGA GA A G AGA GAAGA GA GA GA GA GA Sbjct: 8215 GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAAGGAGAAGAAGAAGAAGAAGAAGAAGAA 8274 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 8275 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 8323 Score = 344 (51.6 bits), Expect = 2.2e-05, P = 2.2e-05 Identities = 102/130 (78%), Positives = 102/130 (78%), Strand = Plus / Plus Query: 2197 GGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAG 2254 GGAG G AAGG GAA AA AAG AAGAA AAGAAG AAGA GA GAAGA GA GAAG Sbjct: 8238 GGAGGAGA-AAGGA-GAAGAAGAAG-AAGAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAG 8293 Query: 2255 ATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG-ATGAAGATGAAGAAGAAGATGAT 2313 A GAAGA GA GA GA GA GA GAAGA GAAGAAG A GAAGA GAAGAAGAAGA GA Sbjct: 8294 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAAGAAGAAGAAGAAGAAGAA 8353 Query: 2314 GATGATGAATAAG 2326 GA GA GAA AAG Sbjct: 8354 GAAGAAGAAGAAG 8366 Score = 331 (49.7 bits), Expect = 8.7e-05, P = 8.7e-05 Identities = 117/163 (71%), Positives = 117/163 (71%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCT-GATGCAGCAAAA-AAG-GGAGTTGTCAAGGCTGAAAAA-AGC 2220 GAG AA GGA AG GA G AG A AA AAG GGAG G AGG GA A AG Sbjct: 8183 GAGAGAAGGGAGAGGGGAGA-GAAGAAGAAGAAGAGGAGGAGG--AGGAGGAGGAGGAGG 8239 Query: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 A GA AAAG AG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAA Sbjct: 8240 AGGAGAAAGGAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 8298 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATG-ATGATGATGAATAAG 2326 GA GAAGAAGA GAAGA GAAGAAGAAGA G A GA GA GAA AAG Sbjct: 8299 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAAGAAGAAGAAG 8345 Minus Strand HSPs: Score = 224 (33.6 bits), Expect = 6.6, P = 1.0 Identities = 56/70 (80%), Positives = 56/70 (80%), Strand = Minus / Plus Query: 2291 TCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCC 2232 || ||||| |||||||||||||||| |||| || |||||||| |||||||||| ||| Sbjct: 11246 TCCTCTTCCTCTTCCTCCTCCTCCTTCTCCTTCTCCTCTTCCTCCTCTTCCTCCTGTTCT 11305 Query: 2231 TTCTTTTTCT 2222 | || | || Sbjct: 11306 TCCTCCTCCT 11315 Score = 221 (33.2 bits), Expect = 9.0, P = 1.0 Identities = 77/110 (70%), Positives = 77/110 (70%), Strand = Minus / Plus Query: 2277 CTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCT 2218 CTCCTC TCCTC TCCTC TC TC T CTC T TCCTC TC TCCT CTT TC TG T Sbjct: 11245 CTCCTCTTCCTCTTCCTCCTCCTCCTTCTCCTTCTCCTCTTCCTCCT-CTTCCTCCTGTT 11303 Query: 2217 TTTT-TCAGCCTTGACAACTCCCTTTTTTGCTGC-ATCAGGCTTTCCTTTAG 2168 TT TC CCT AC ACTCCCT TT T CT AT AGG TT CT TAG Sbjct: 11304 CTTCCTCCTCCTCCACCACTCCCTCTTCT-CTAAGATTAGGTCTTACTATAG 11354 >AC002545 Homo sapiens chromosome 17, clone 200g19, complete sequence. Length = 64,923 Plus Strand HSPs: Score = 361 (54.2 bits), Expect = 3.9e-06, P = 3.9e-06 Identities = 387/659 (58%), Positives = 387/659 (58%), Strand = Plus / Plus Query: 1476 AGTAATATAGGCTATATTTTTC-T-TAGTCATATCCTG-AAACATTTATGTTCTTTTCCT 1532 AG AAT TA TAT TT TC T TA TCAT T T AAA A TTA T T T C Sbjct: 48954 AGAAATGTAATTTATCATTGTCATATATTCATGTAGTATAAAAAATTAAATGGGTCTACA 49013 Query: 1533 TTAGATACTCAAAAAACCACA-GCATCACTAAGTTAAATTACA-AGTCTGCTGCT-CTGT 1589 A A T AAAA C CA G AT TA T ATT C AG GC CT CT T Sbjct: 49014 GAACTCATTTTGAAAATC-CATGTATTG-TAT-TCCCATTCCCCAGAA-GCAACTACTTT 49069 Query: 1590 CCAGTAAATTA-ATAAGA-TTAAGGAAATCTATAACTCTTATAGTTCAGTAAATTGAAAT 1647 CA T TTA AT TT GG A T TA TC ATA T AG AA AAT Sbjct: 49070 ACACTCTCTTAGATGTTTCTTTTGGTATT-TACTT-TCCAATATCTGAGCAACAAATAAT 49127 Query: 1648 ATTAAATACTTAATTTTCAGCTTTAGTCATTCTGAAAAGTGTTTATTTCTAGATGTTTCT 1707 ATTA T CTTAATTTTCAG TTTAG AT CTG A TG T TT CTA A G Sbjct: 49128 ATTATTT-CTTAATTTTCAGTTTTAGAGAT-CTGCCTATTGGCTTTTGCTATAAGAGATA 49185 Query: 1708 TAACCTAATTGCATGTTTATTGACAAATTACCTTTTTTTTTTAAGACCACATTTCCTA-C 1766 TAA T T GC T T T TT A TTA TTT T TTT AA A ATTT TA C Sbjct: 49186 TAAAATCTTAGC-TATATTTT---ATTTTATATTTATATTT-AATTTTATATTTTATAAC 49240 Query: 1767 TAAGGAT-TAAGGTCTGACAGTGTAAACCTGTAGAGTGCTTTTTTGCATT-CAGAAGGTG 1824 TA T TAA TCTGA GT T AAC TA A T C T T C CA T Sbjct: 49241 TATCACTCTAAAATCTGAG-GTTTTAACTCCTAAACTACCTCTACCCCCAACAACTACTC 49299 Query: 1825 GCAGTGT-CT-ACCCTTTAATCAAAGTCTCTACATT-CTGGTTTTAATAGA-GTTAGGAT 1880 C T T CT ACCCT CA TCTC ACATT CT T T AA A GTTAG AT Sbjct: 49300 TCCATATGCTCACCCTCCCTGCAGTCTCTCAACATTGCTA-TATCAAAATTTGTTAG-AT 49357 Query: 1881 CTGGTAGATAATTGCACCTCA-ATGAGGCATAACTTTGCAAATATT----AGA-CTATGC 1934 T GTA T A T CA T A AT A AT ACT TGCAAA ATT A A CTA GC Sbjct: 49358 -TAGTAC-TCAGT-CA--TGATATTATT-ATTACTATGCAAAAATTTTTCACAACTAAGC 49411 Query: 1935 CATTTCATG-AGTTATAGATTGTTATAATGATCTTGTATTTTT-ATGTTCATTTA-TTGA 1991 CAT CAT AG T AG T TTAT T TCT TA T T AT TCAT A TTGA Sbjct: 49412 CATGACATATAGGTCAAGCATATTATCTTTGTCTCATACGTGTGATCATCATGGAGTTGA 49471 Query: 1992 AGTTCTAGTTATTTCTGGAGTTGCTGTGGATCTACAGATACGTGAT-ATTTTGGTATAAC 2050 GTT TA TT TT TGG TTG T TG T TA G T GTG T ATTTT TATA C Sbjct: 49472 TGTT-TATTTTGTTTTGGT-TTGTTTTGTTTATATTGTTG-GTGCTTATTTT--TATACC 49526 Query: 2051 TAG-AATCTTGATTTCTT-TCATAAAGTTCTGCCATGTTCTAT-TTCTTTCCTTAAT--C 2105 A AATC GATTT T TC AAA TTCT CCAT AT TTCT TCCT AAT C Sbjct: 49527 AATCAATCACGATTTTATATCC-AAA-TTCT-CCATCAGAAATATTCTCTCCTCAATTAC 49583 Query: 2106 TTTTTTTCTTCCCTACTGTTTT-ATCCTC 2133 TTT T CTAC TTTT A CC C Sbjct: 49584 ATTTCAGGTATTCTACCATTTTCAGCCAC 49612 >L06178 Apis mellifera ligustica complete mitochondrial genome. Length = 16,343 Plus Strand HSPs: Score = 249 (37.4 bits), Expect = 0.48, P = 0.38 Identities = 429/752 (57%), Positives = 429/752 (57%), Strand = Plus / Plus Query: 1379 AGTATCTTGAAGTTCATGAAAATGT-TGGTAGTCACTTCAAGT-CAAAAATGAGCATTTT 1436 A TAT T AA T CAT AAT T T TA CTT AA T CAAAAA A A TT Sbjct: 9764 AATATAATCAA-TCCATATGAATATATATTAAAT-CTTAAATTACAAAAAATATAAATT- 9820 Query: 1437 CAAATGGCTTGGCAT-ACAGTACAAAAACAGGCTAGACAAAGTAATA-TAGGCTATATTT 1494 CAA T TT T A A TA A AAA TA A AAA TAATA TA TA ATTT Sbjct: 9821 CAA-TCAATTCAATTTAAATTAAATAAATTTAATA-ATAAATTAATAATAAT-TAAATTT 9877 Query: 1495 TTCTTAGTCATATCCTGAAACATTTATGTTCTTTTCCTT-TAGATACTCAAAA-AACCAC 1552 TA T A AT T AA ATTT T TT TTTT TT TA ATA T AAA AA A Sbjct: 9878 CCAATAATTAAATT-TAAATTATTT-T-TTATTTTATTTATAAATAATATAAACAAATAA 9934 Query: 1553 AGCATCACTAAG-TTAA-AT-TACAAG-TC-TGC-TGCTC-TGTCCAGTAAATTAATAAG 1605 A AT TA TTAA AT T CAA T T T T T A TA ATTAAT A Sbjct: 9935 ATTATTGATATTATTAACATATTCAATATAATTAATAATAATAATAAATATATTAATTA- 9993 Query: 1606 ATTAAGGAAATCTATAACTCTTA-TAGTTCAGTA--AA-TTGA-AATAT-TAAATACT-- 1657 AT AA AAATCTATAACTCTTA T TT A A AA TT A AAT T T TACT Sbjct: 9994 ATAAATCAAATCTATAACTCTTAATTTTTGATGACCAAGTTCATAATTTATTCTTACTAA 10053 Query: 1658 TAATTTTCAGCTTTAGTCATTCTGAAAAGTGTTTATTTCTAGATGTTTCTTAACCTAATT 1717 TAAT T A C T A C CT A A A T CTA A T T AA TAA Sbjct: 10054 TAATGATAAACCTAAAACTAACTCACATACAGAAAATACTAAAAAAAT-TAAAAATAAC- 10111 Query: 1718 GCATGT-TTATTGACAAATTACCTTTTTTTTTTAAGACCACATTTCCTACTAAGGATTAA 1776 CAT T TTA T CA AT CC T T AA A ACA T TACTAA ATT Sbjct: 10112 -CATCTATTAATTTCATAT--CCAATAATAAAAAATAAAACAGTAATTACTAAAAATTCT 10168 Query: 1777 GGTCTGACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGTGGCAGTG-TCTAC 1835 T T A A T AAA CT TA A TTT CATT A AA A T TA Sbjct: 10169 A-T-TAAAATTAAAAAACT-TAAAAAA--TTTA--CATT-ATAATACCATAAAAATATAA 10220 Query: 1836 CCTTTAATCAAAGTCTCTACAT-TCTGGTTTTAATAGAGTTAGGATCTGG-TAGATAATT 1893 TAAT A A T T TACA T TTTAATA A TT AT G TA ATA TT Sbjct: 10221 AAAATAATAATATTAT-TACAAATAATAATTTAATAAA-TTCTTATAAAGCTAAATAGTT 10278 Query: 1894 GCACCTCAATGAGGCAT-AACTTTGCAAAT-ATTAGACTATGCCATTTCATGAGTTATAG 1951 A T A A CAT AA TTTG AAAT A A TAT A TTCAT A T ATA Sbjct: 10279 TAAAATTTAAAAA-CATTAATTTTGTAAATTAAAATTATATTAAAATTCATTA-TAATAT 10336 Query: 1952 ATT-GTTATAATGATC-TTG-TATTTTT-ATGTTCATTTATTGAAGTTCTA--GTTATTT 2005 TT G TA A T ATC TT TA TTT A ATTTATT AA TA G TA TT Sbjct: 10337 TTTAGCTAAATTTATCATTCATAAATTTCAAAAAAATTTATTAAATAAATATCGATAATT 10396 Query: 2006 CTGGAG-TTGCTGTGGATCTACAG-ATACGTGATATTTTGGTATAACTAGAATCTTGATT 2063 C A TT C T T TA A A AC T AT TTTTG TA AA TA A T T ATT Sbjct: 10397 CCCAAAATTACCATTT-T-TAAATTAAAC-T-ATTTTTTGATA-AATTA-ATTAT--ATT 10448 Query: 2064 T-CTTTCATAA-AGT-TCTGCCATGTTCTATTTCTTTCCTTAATCTTTTTT-TCTTCCCT 2119 C TCAT A A T TC AT TT TAT TCTT C TTAAT T T T TT C Sbjct: 10449 AACAATCATCATATTATCAAAAATTTT-TATATCTT-CATTAATTTCAATAATTTTAACA 10506 Query: 2120 ACTGTTTTA 2128 A T TTTA Sbjct: 10507 ATTTATTTA 10515 Minus Strand HSPs: Score = 322 (48.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06 Identities = 344/581 (59%), Positives = 344/581 (59%), Strand = Minus / Plus Query: 2104 ATTAAGGAAAGAAATAGAACA-TGGCAGAACTTTATGAAAGAAATCAAGATT---CT--A 2051 ATTAA AA AA T A CA T C AA TT ATGAA GAA T AAGAT C A Sbjct: 7883 ATTAATAAATAAATTCCAGCAGTAACTAAAGTTGATGAATGAACTAAAGATGAAACAGGA 7942 Query: 2050 GTTATACCAAAATATCACGTATCTGTAGATCCACAGCAACTCCAGAAATAACTAGAACTT 1991 GTT A C A TAT C TAT GTA ATC A AA AG AAT T G CTT Sbjct: 7943 GTTGGAGCTAT-TATTGC-TATTGGTA-ATCAAGTTGAAAA--AGGAATTTGT-GCTCTT 7996 Query: 1990 CAA-TAAATGA-A-CATAAAAATACAAGATCATTATAACAATC-TATAACTCATGAAATG 1935 A TAAA G A CA AAAATA AA ATCATTATAA A TC T TA T AT AAA Sbjct: 7997 TTAGTAAAAGCTATCAATAAAATATAA-ATCATTATAA-ATTCATTTATTTTATAAAAAC 8054 Query: 1934 GCATAGTCTAATATTTGC-AA-A-GTTATGCCTCATTGAGGTGC-AATTATCTACCAGAT 1879 A A T T AT TT AA A GTTAT TC A T AAT A C A A T Sbjct: 8055 TTAAATT-TCATCTTCCATAATATGTTATTAATCCCATAATTAATAATAAACCAATATCT 8113 Query: 1878 CCTAACTCTATTAAA-ACCAGAATGTAGAGACTTTGATTAAAGGGTAGACACTGCCACCT 1820 CCTAA TC ATT AA A A A T A AC T A TAAA G T A T A T Sbjct: 8114 CCTAA-TCGATTTAATAAAATAGTAACTATACCTGAAGTAAATGATTTT-ATTTTTATAT 8171 Query: 1819 TCTGAATG-CAA-A-AA--AGCACTCTACAGGTTTACACTGTCAGACCTTAA-TCCTTAG 1766 T AAT CAA A AA AG A T TA T AC T TCA ACCT AA T TT Sbjct: 8172 AATAAATTACAAGACAATAAGAAAT-TAATCCTAAACCATCTCA-ACCTAAAATAATTGA 8229 Query: 1765 TAGGAAATGTGGTCTTAAAAAAAAAAGGTAATTTGTCAATAAACATGCAATTAGG---T- 1710 TA A AT TGGTCTTAAAA AA A TA T G A TAAA AT AATTA T Sbjct: 8230 TAATATATTTGGTCTTAAAATTAACATATATATAGAAATTAAAAATAAAATTATTAAATA 8289 Query: 1709 TAAGAAAC-ATCTAGAAATAAA-CACTTT--TCAGAATGACTAAAGCTGAAAATTAAGTA 1654 TAA AAAC ATC A TAA CACTT TC AT CTAA CT AAAT AA TA Sbjct: 8290 TAAAAAACGATCCATTTTTAATTCACTTAAATCTATATATCTAATTCTATAAAT-AA-TA 8347 Query: 1653 TTTAATATTTCAATTTACTG-AACTATAAGAGTTATAGATTTCCTTAATCTTATTAATTT 1595 TTA TA AA TTA T AACTA AA A T A A ATT T A T TA T A TT Sbjct: 8348 ATTA-TAGAAAAAATTATTCTAACTAAAAAAATAA-ATATTAA-TGATTTATAATCAATT 8404 Query: 1594 ACTGGACAGAGCAGCAGACTTGTAATTTAACTTAGTGATGCTGTGGTTTTTTGAGTATCT 1535 A T ACA A A A ACTT TA TT AA TTA ATG T T T TTT A T TC Sbjct: 8405 AATA-ACAAAAAATTAAACTT-TA-TTGAA-TTAA--ATG-TATAAATATTTCA-T-TCA 8455 Query: 1534 AAAGGAAA 1527 AAA AAA Sbjct: 8456 AAAAAAAA 8463 Score = 235 (35.3 bits), Expect = 0.027, Sum P(2) = 0.026 Identities = 473/844 (56%), Positives = 473/844 (56%), Strand = Minus / Plus Query: 2112 AAAAAAAGATTAAGGAAAGAAATAGAACATGGCAGAACTTTATG-AAAGAAATCAAGATT 2054 AA AA A ATTAA AA AA TA AA T A AA T AT AAA A T ATT Sbjct: 9851 AATAATAAATTAAT--AATAATTA-AATTTCCAATAATTAAATTTAAATTATTTTTTATT 9907 Query: 2053 CTAGTTATACCAAAATATCA-CGTATCTGTAGATCCACAGCAACTCCAGAAATAACTAGA 1995 TA TTATA A AATAT A C AT T AT A A A CA A AA TA A Sbjct: 9908 TTATTTATAA-ATAATATAAACAAATAAATT-ATTGATATTATTAACATATTCAA-TATA 9964 Query: 1994 ACTTCAATAAATGAACATAAAAATACAAGATCATTATAACAA-TCTATAACTCATGAAAT 1936 A TT AATAA T A ATAAA ATA A AT A TA A CAA TCTATAACTC T A T Sbjct: 9965 A-TT-AATAA-TAATAATAAATATATTA-ATTAATAAATCAAATCTATAACTCTTAATTT 10020 Query: 1935 GGCATAGTCTAATATTTGCA-AAGTTATGCCT-C-ATTGAGGTGCAAT-TAT--CTA-C- 1884 AT G C AA TT CA AA TTAT C T C A T A G AA TA CTA C Sbjct: 10021 TTGAT-GACCAAG-TT--CATAATTTATTCTTACTAATAATGATAAACCTAAAACTAACT 10076 Query: 1883 CAGATCCTAACTCTATTAAAACCAGAATGTAGAGACTTTGATTAAAGGG-TAGACACTGC 1825 CA AT C A TA TAAAA A A A A C T ATTAA TA CA T Sbjct: 10077 CACATACAGAAAATACTAAAAAAATTAAAAATAACCATCTATTAATTTCATATCCAATAA 10136 Query: 1824 CACCTTCTGAATGCAAAAAAGCACTCTACAGG-T-TTACACTGTCAGACCTTAATCCTTA 1767 A T AA CA AA ACT A A T TTA A T A A CTTAA T Sbjct: 10137 TAAAAAATAAAA-CAGTAATT-ACTAAAAATTCTATTAAAATTAAAAAACTTAAAAAATT 10194 Query: 1766 GTAGGAAATGTGGTCTTAAAAA-A-AAAAGGTAATT-TGTCAATAAACATGCAATTAGGT 1710 TA AT C TAAAAA A AAAA TAAT T T A TA A AT AAT A T Sbjct: 10195 -TACATTATAATACCATAAAAATATAAAAAATAATAATATTATTACAAAT--AATAAT-T 10250 Query: 1709 TAAGAAACATCT-AGAAA--TAAACACTTTTCAGAATGACTAAAGCTGAAAATTAAGTAT 1653 TAA AAA TCT A AAA TAAA A TTT A AAT TAAA AA ATTAA T T Sbjct: 10251 TAATAAAT-TCTTATAAAGCTAAATAGTTTA-A-AATT--TAAA----AACATTAATTTT 10301 Query: 1652 TTAATATTTCAATT-TACTGAACTATAAGAGTTATAGATTTCCTTAATCTTATTAATTTA 1594 TAA ATT AATT TA T AA T A A T ATA TT CT AAT TTAT A TT A Sbjct: 10302 GTAA-ATTAAAATTATATTAAAATTCATTA-TAATATTTTAGCTAAAT-TTATCA-TTCA 10357 Query: 1593 CTGGACAGAGCAGCAGACTTG--TAATTTAACTTAG-TGATGCTGTGGTTTTTTGAGTAT 1537 T A A CA A A TT TAA T AA T G T AT C TT A T T Sbjct: 10358 -TA-A-ATTTCAAAAAAATTTATTAAATAAATATCGATAATTCCCAAAATTACC-ATTTT 10413 Query: 1536 CTAAAGGAAAAGAACATAA-ATGT-TTCAGGATATGACTAAGAAAAATAT-AGCCTATAT 1480 TAAA AAA A T AT TT A ATAT A AA A ATAT A C A AT Sbjct: 10414 -TAAATTAAACTATTTTTTGATAAATTAATTATATTAACAATCATCATATTATCAAAAAT 10472 Query: 1479 TACTTTGTCTAGCCTGTTTTTG-TACTGTATGCCAAGCCATTTGAAAATGCTCATTTTT- 1422 T T T TCT T TTT TA T T T CAA ATTT AA A TC TT T Sbjct: 10473 TTTTATATCTTCATTAATTTCAATAATTT-TAACAATTTATTTAAATAACATCTTTAATA 10531 Query: 1421 GAC-TTGAAG-TGACTACCA-ACAT--TTTCATGAACT-TCAAGATACTGGGGAATAACA 1368 GAC TT A T ACTA A T TTTC T CT T A ATA T AATAA A Sbjct: 10532 GACCTTCCATATTACTAATTTATTTAATTTCTTACTCTATTTATATA-TCCTTAATAATA 10590 Query: 1367 AA-ACCA-ACATA-AATGTACACAGCCTTTGTCTGAGTCTGATTACAT-TTTAGTCAAAA 1312 ACCA A T AAT A CA TT T T A T TTA T TTT T AA A Sbjct: 10591 TTTACCATATGTTCAATAAATTCACTATTAATTTTAATAATTTTAATTGTTTTTTTAAGA 10650 Query: 1311 A-AACCCTAATT-TATTTGGTCCTCTGCATTCTTTGAAGGATGA 1270 AA TAATT TATTT T T T TTC TT A ATGA Sbjct: 10651 GGAATATTAATTATATTTTCTTATTTTATTTCATTAATCAATGA 10694 Score = 226 (33.9 bits), Expect = 0.065, Sum P(2) = 0.063 Identities = 390/698 (55%), Positives = 390/698 (55%), Strand = Minus / Plus Query: 2004 AATAACTAGAACTTCAATAAATGAACATAAAAATACAAGATCATTATAACAATCTATAAC 1945 A TAA TAGA TTC TAAAT AA TAA A T CAA AT T AT A T T T AC Sbjct: 1122 ATTAATTAGA--TTCT-TAAATAAATTTAATATT-CAAAATTTTAATTTTA-TATTTTAC 1176 Query: 1944 TCATGAAATGGCATAGTCTA-ATATTTGCAAAGTTA-TGCCTCATTGAGGTGCAAT-TAT 1888 AT AAAT CA A T TA A ATT AA TTA T T ATT A T CAAT TAT Sbjct: 1177 A-AT-AAATATCAAA-TATATACATTCTTAACATTAATATTTAATT-AT-T-CAATATAT 1230 Query: 1887 CTACCAGATCCTA-ACTC-TATTAAAACCAGAATGTAGAGACTTTGATTA--AAGGGTAG 1832 C A TC T A T TA T AAA A AAT TA A TT A TA AAG GT Sbjct: 1231 CCAATTTTTCTTTCATTTGTAATTAAATGA-AATCTA-ATTTTTATAATAGTAAGAGTTA 1288 Query: 1831 ACACTGCCACCT---TCTGAATGCAAAAAAGCACT-CTACAGGTTTACACTGTCAGACCT 1776 A CT A T T T A T C AA A T CTA A TTA A T GA T Sbjct: 1289 AAGCTTATAATTGAATTTTATTTCTTTTAATAATTTCTAGAATATTA-ATAATTTGAAAT 1347 Query: 1775 TA-ATCCTTAGTAGGAAATGTGG-TCTTAAAAAAAAAAGGTAATTTGTCAATAAACATGC 1718 TA AT TTA T AAA GTG T TT AAAAA AAA T TTT T AA A A T C Sbjct: 1348 TATATTATTATTTTAAAACGTGTATTTTTAAAAATAAAT-T--TTTATAAAAATAATTTC 1404 Query: 1717 AATTAGGTTAAGAAACATCTAGAAATAAACACTTTTCAGA-ATGACTAAAGCTGAAAATT 1659 A T A G TAA A A A TA A ATA A A T T AGA AT T A CT A A TT Sbjct: 1405 ATTGATGATAA-AGATAA-TAAATATATATA-TCAT-AGATATTT-TGCA-CTTACACTT 1458 Query: 1658 AAGT-ATTTAATATTTCAATTTACTGAACTATAAGAGTTATAGATTTCCTTAATCTTATT 1600 T ATTTAATATTTCA TTT AC TAA TT TA A T TTA TTAT Sbjct: 1459 CTTTCATTTAATATTTCATTTTTTATTACATTAAATTTTTTATAAATTATTATAATTATG 1518 Query: 1599 AATTTACTGGACAGAGCAGCAGACT--TGTAATTTAACTTAGTGATGCTGTGGTTTTTTG 1542 AA TTA T CA A GCA CT TGT T TAA TTA T T TTT TT Sbjct: 1519 AAATTAATCTTCAAATTTGCAATCTGATGTTTTATAATTTAAAC-TATAATAATTTATTT 1577 Query: 1541 AGTATC-TAAAGGAAAAGAACATAAATGTTTCAGGATATGACTAAGAAAAATATAGCCTA 1483 A AT TA A A A A A AAA TTT A T A T AAA TA A TA Sbjct: 1578 AACATGATATAATATAGTATTAGAAAAATTTTAATTTTCAATTTTTAAATTTACAATTTA 1637 Query: 1482 --TATTACTTTG-TCTAGC-CTGTTTTTGTACTGTATGCCAAGCCATTTGAAAATGCTCA 1427 T TTA TT G T TA CT T G A T TA AA CC TTT A T T A Sbjct: 1638 ACTCTTATTTAGATTTAATACTAAATAAG-ATT-TAAAA-AACCCTTTTTTATTTTTTTA 1694 Query: 1426 TTTTTGACTTGAAGTGACTACCAACATTTTCATGAACTTCAAGATACTGGGGAATAACAA 1367 TTTTT TT AA T TA AA AT T CA A TT AAG TA AA AAC A Sbjct: 1695 TTTTT---TTAAATTTT-TAA-AATATATACAAAGATTTTAAGTTAAAATTTAAAAACTA 1749 Query: 1366 --AA-C--CAACAT-AAATGTACACAGCCTTTGTCTGAGTCTGATTAC-ATTTT-AGTCA 1315 AA C CAA AT AAA TA A A TT T T A TCT A TA A T A TCA Sbjct: 1750 TTAATCTTCAAAATTAAAAATAAAAATTAATTTTTTAAATCTTAATAATAAAGTGATTCA 1809 Query: 1314 AAAAAACC 1307 A AACC Sbjct: 1810 TATCAACC 1817 Score = 190 (28.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06 Identities = 252/449 (56%), Positives = 252/449 (56%), Strand = Minus / Plus Query: 961 AAAATTAATTTTAGGATTTTAAGTTAACAGATCACAAAAACAAATACTATCAGGTGTACA 902 AAAAT AATTTT ATTTTAAGTTAA GA AC AA AA TA TAT TG A A Sbjct: 12180 AAAATCAATTTTTAAATTTTAAGTTAAT-GA--ACTTGAATAAGTA-TATATTTTGAAAA 12235 Query: 901 CTGCATTGCTATTTAAAGCTGCCTGTGAATTTCTGTGATGCATTGGACAGGGTGCAA-AT 843 AT A TAAA T CT T AA TT T T T TT A A AA AT Sbjct: 12236 TATAATATAGAAATAAAATTTTCTATTAACTTTTTTACTTATTTTAATATAAATTAATAT 12295 Query: 842 -A--CTATAATATAC-TAAATATCCTTC-ACAACCAAAGCTTAATTTACAACTATT-TAA 789 A CT TAA ATAC TAAA AT CTT A AA A TA TTA A ATT TAA Sbjct: 12296 TAAACTTTAA-ATACATAAAAATTCTTTTATAAAATATAAATATATTAAATAAATTATAA 12354 Query: 788 TTTATACTAGCTAGAACCCTAGATGA-ACATTCTAC-AATTACACTATTTCAAAGG-GAT 732 T ATA TA TA C T A A A ATT TA AATT C AT TC AA GA Sbjct: 12355 CTAATATTAA-TATTTCAGTTCAACATATATT-TATTAATTTATC-ATATCGAATTCGAG 12411 Query: 731 AGTATTTTTCAA-GAAATAAAAAGATCAAAAGGAGATACACTGGGCAAAGGAGACCAAAT 673 GTA T C GAA T AAA AT AAA A AT A T AAA A A AAAT Sbjct: 12412 -GTAAAATACCTCGAATTCAAATAATTAAACAAATATGAAATAAATAAATTAAAATAAAT 12470 Query: 672 GTCTAATTCAAATGCTCTGGGAACACTCCCACCCAACAGGAATTTTATACTATTTAA-AT 614 T TAATT A T T AA A TCC A AA A AAT TTA A TA T AT Sbjct: 12471 -T-TAATTGATCAA-TATTT-AA-A-TCC-ATAAAATATTAATCTTAAAATAACTCTTAT 12523 Query: 613 ATAACCAATATGAACAAGTATT-AGCTAAGAAACTTTGATTGTACATTTACACTCTAAAC 555 A A AATAT A A TATT AG TAA AAA TT AT A AT T C TCTA Sbjct: 12524 AAATATAATATTTATA--TATTCAGATAAAAAAATTA-ATACAA-ATATTCT-TCTATGA 12578 Query: 554 TGA-CAA-AGTAGCTTGCTAAATTTCTCTCAGATTCTACTGTAA 513 T CAA A TA A A T T TCAGATTCT CT AA Sbjct: 12579 TATTCAATATTAAAACCAGATACTAAT-TCAGATTCTCCTTCAA 12621 Score = 190 (28.5 bits), Expect = 2.3, Sum P(2) = 0.90 Identities = 376/682 (55%), Positives = 376/682 (55%), Strand = Minus / Plus Query: 2270 TCCTC-ATCCTCTTCATCTTCCTCATC-TTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTT 2213 TCC C AT TC CAT TT T ATC TTC TC CTTC T TTT TTTTTT Sbjct: 2174 TCCACCATTATCAGCATATTTAT-ATCATTCTTCACCTTCAGTAGATTTTGCAATTTTTT 2232 Query: 2212 CAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAA 2153 C CTT A A TC TTT CT AT A TC TT A CT ATA A CAA Sbjct: 2233 CT--CTTCATATATCAGGAATTTCCTCAATTATAGGATCATTAAACTTAATAGTTA-CAA 2289 Query: 2152 T-ATCCTTCCAAAGCAAAGGGAGGATAAAACAGTAGGGAAGAAAAAAAGATTAAGGAAAG 2094 T AT T AAA AAA TA AA A TA G A AAA ATTA A Sbjct: 2290 TTATAATAATAAA--AAATTTTTC-TATAA-ATTATG-ACCAAATTTC-ATTATTTCCAT 2343 Query: 2093 AAATAGAAC--ATGGCAG-AACTTTATGAAAGAAATCAAGAT-TCTAGTTATACCAAAAT 2038 A AG AT CAG AA TTTAT AA A ATCA A T TA TTA A Sbjct: 2344 GATCAGTTTTTATTACAGCAATTTTATTAATTATATCATTACCTGTA-TTAGCTGGAGCA 2402 Query: 2037 ATCACGTAT-CTGTAGATCCACAGCAACTCCAGAAATAACTAGAACTTCAATAA-AT-GA 1981 AT AC TAT CT T T A G AA T A A A A C A TTC AT AT G Sbjct: 2403 ATTAC-TATACTATTATTTGATCGAAATTTTA-ATACATC-ATTT-TTCGATCCTATAGG 2458 Query: 1980 ACATAAAAATACAAGATCATTAT-AACAATCTATAACTCATGAAATGGCATAGTCTAATA 1922 A T A AT CAA TC TTAT AACA T TAT T AT TGG A TC A A Sbjct: 2459 AGGTGGAGATCCAAT-TCTTTATCAACATT-TATTT-TGATTTTTTGGTC-A-TCCAGAA 2513 Query: 1921 TTTGCAAAGTTATGCCT-CATTGAGGTGCAATTATCTACCAGATCCTAACTCTATTAAA- 1864 TT A TTA T C T GA TG A T ATCT CA AT TAA T AT AAA Sbjct: 2514 GTTTATATTTTAATTTTACCTGGATTTGGATTAATCTCTCATATTGTAA-TAAATGAAAG 2572 Query: 1863 ACCAGAATGTAGAGACTTT-G--A-TTAAAGGGTAGACACTGCCACCTTCTGAAT-GCAA 1809 A A AA AGA A TTT G A TT AAG TA TGC A TT GAAT G A Sbjct: 2573 AGGAAAAAA-AGAAATTTTTGGTAATTTAAGAATAATTTATGCAATATTAGGAATTGGAT 2631 Query: 1808 AAA-AGCACTCTACAGGTTTA-CACTGTCAGACCTTAATCCTTAGTAGGAAATGTGG-TC 1752 AG T TA G TT A CAC TCA A TT A C T G A A ATGT G T Sbjct: 2632 TTCTAGGTTT-TATTGTTTGAGCACA-TCACATATTTA-CAGTCGGATTAGATGTTGATA 2688 Query: 1751 TTAAAAAAAAAAGGTAATTTGTCAATAAACATGCAATTAGGTTAAGAAACATCTAG-AAA 1693 T A A A TA TT CAA AA AT CA TT G T A AACA A AAA Sbjct: 2689 CTCGAGCATATTT-TACTTCAGCAACAATAAT-CA-TT-GCTGTACCAACAGGAATTAAA 2744 Query: 1692 -TAAACACTTT-TCAG-AA-TGACTAAAGCTGAAAATTAAGTATTTAATATTTCAATTTA 1637 T A T T AG AA T A A G T AAAATTAA ATT AATATTTCAATTT Sbjct: 2745 GTTTTTAGATGATTAGCAACTTATCATGGTTCAAAATTAAA-ATTAAATATTTCAATTTT 2803 Query: 1636 CTGAACTATAAGAGTTATAGATT-TCCTTAATCTTATTA-ATTTACTGGA 1589 TGA C TA G TTAT AT T TTA T TT T ATT AC GGA Sbjct: 2804 ATGATCACTAGGTTTTATT-ATACTATTTACTATTGGTGGATTAACAGGA 2852 Score = 182 (27.3 bits), Expect = 0.14, Sum P(2) = 0.13 Identities = 162/280 (57%), Positives = 162/280 (57%), Strand = Minus / Plus Query: 851 GGTGCAAATACTATAATATACTAAATATCCTTCACAACCAAAGC-TTAATT-TACAA--C 796 GGT AA A TA ATATA TA A A TT A AA AAA TTAA T TA AA C Sbjct: 8240 GGTCTTAAAATTAACATATA-TATAGAAA-TTAAAAATAAAATTATTAAATATAAAAAAC 8297 Query: 795 TATTTAATTTATACTAGCTAGAACCC-TAGATGAACATTCTACAATTACACTATTTCAAA 737 AT A TTT A T CT AA C TA AT A ATTCTA AA TA A TA TT A A Sbjct: 8298 GATCCATTTTTAATTCACTTAAATCTATATATCTA-ATTCTATAAATA-A-TAATT-ATA 8353 Query: 736 GGGATAGTATTTTTCAAGAAATAAAAAGATCAAAAGGAGATACACTGGGCAAAGGAGACC 677 G A A T TT T A AAA AAA A AT AA GA TA A T AA A A Sbjct: 8354 GAAAAAATTATTCTAACTAAAAAAATAAATATTAATGATTTATAATCAATTAATAACAAA 8413 Query: 676 AAATGT--CTA-ATTCAAATGC-TCTGGGAACACTCCCACCCAACAGGAATTTTATACTA 621 AAAT CT ATT AA T T T AA A T C A CAA A AA TT T TA Sbjct: 8414 AAATTAAACTTTATTGAATTAAATGTATAAATATTTC-ATTCAAAAAAAAATTCCT--TA 8470 Query: 620 TTTAAATATAACCAATATGAACA-AGTATTAGC-TAAGAAACTTTGATT 574 TTTAAATATAA AATAT A C A TA A T A AAAC T ATT Sbjct: 8471 TTTAAATATAATAAATATAATCTTATTAACATTATTAAAAACCTAAATT 8519 Score = 176 (26.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05 Identities = 264/465 (56%), Positives = 264/465 (56%), Strand = Minus / Plus Query: 971 AACTAAAAAAAAAATTAATTTTAGG--ATTTTAAGTTAACAGATCACA-AA-AACAAATA 916 AACTAAA AAAAAATTAAT A A TT A AA A AT A A AA AA AAAT Sbjct: 9592 AACTAAATAAAAAATTAATAACAAACCAAATTCATAAAATAAATAAAATAATAATAAATT 9651 Query: 915 CTATCAGGTGTACACTGCATTGCTATTTAAAGC-TGCCTG-TGAATTTCTGTG-ATGCAT 859 TAT AG T A A A T TA AAA T T T AATTT T A CA Sbjct: 9652 -TAT-AGATAAAAAAACTAATAATAAAGAAATTATTAATAATAAATTTATAAATAAACAA 9709 Query: 858 TGGACAGGGTGCAAATACTATAATATACTAAATATCCTTC-ACAAC--CA-AAGCTTAAT 803 T A A T A TA T AA A A TAAA AT TC A AA CA AA TTAAT Sbjct: 9710 TTTA-ATC-TATTATTATTTAAAGAAA-TAAAAATTAATCCAAAAATTCATAAAGTTAAT 9766 Query: 802 TTACAACTATTTA-ATTTATACTAGCTAGAACCCTAGATGA-ACATTCTACAATTACACT 745 TA A C AT A AT ATA TA T AA C TA AT A A A TA AA T CA T Sbjct: 9767 ATA-ATCAATCCATATGAATA-TATATTAAATCTTAAATTACAAAAAATATAAATTCAAT 9824 Query: 744 -ATTTCAAAGGGATAGTATTTTTCAAGAAATAAAAAGATCAAAAGGAGATACACTGGGCA 686 A TTCAA A A TA T A AATAA AA AT AA A A TA A T A Sbjct: 9825 CAATTCAATTTAA-ATTAAATAA-ATTTAATAATAA-ATTAATAATAATTAAATTTCCAA 9881 Query: 685 -AAGGAGACC-AAATGTCTAATTCAAATGCTCTGGGAACACTCCCACCCAACAGGAATT- 629 AA A A AAAT T T TT A T T T AA A T A C AA A AATT Sbjct: 9882 TAATTAAATTTAAAT-TATTTTTTATTTTATTTATAAATAATATAAACAAATA--AATTA 9938 Query: 628 TT-ATACTATTTAAATATAACCAATATGAACAAGTATTAGCTAAGAAAC-T-TTGATTG- 573 TT ATA TATT A ATAT CAATAT A AA TA TA TAA AAA T TT ATT Sbjct: 9939 TTGATATTATTAACATATT--CAATATAATTAA-TAATAA-TAATAAATATATTAATTAA 9994 Query: 572 TACATTTACACTCTA-AACTGACAAAGTAGCTTGCTAAATTTC-TCTCAGATTCT-ACTG 516 TA AT A A TCTA AACT AA T TG AA TTC T ATTCT ACT Sbjct: 9995 TAAATCAA-A-TCTATAACTCTTAATTTTTGATGACCAAGTTCATAATTTATTCTTACTA 10052 Query: 515 -TAA 513 TAA Sbjct: 10053 ATAA 10056 Score = 155 (23.3 bits), Expect = 2.0, Sum P(2) = 0.86 Identities = 237/424 (55%), Positives = 237/424 (55%), Strand = Minus / Plus Query: 964 AAAAAAATTAATTTTAGGATTTTAAGT-TAACAG-A-TCACAAAAACAAATACTATCAGG 908 AAA ATTA TTTTA ATTT AA T ACA A T AC A A AAATA TAT AGG Sbjct: 6523 AAATTGATTA-TTTTAAAATTTAAATAATTACAATAATTACTACCA-AAATAATATAAGG 6580 Query: 907 -TGTACACTGCATTGCTATTTAAAGCTGCCTGTGAATT-TCTGTGATGCATTGG-ACAGG 851 T T T AT TATTTAA C T T AATT T T AT TT A A Sbjct: 6581 ATTTTTTATAAATCAATATTTAAGTCGAAAT-TAAATTGTAAATAATTACTTCTTATATT 6639 Query: 850 GTGCA--AATAC-TATAATATACTAAATA-TCCTTCACAACCAAAGCTTAATTTACAACT 795 T AAT T TA TA A TAA TA T TT A AA AAA C TAA TA A T Sbjct: 6640 TTTATTTAATTTATTTATTAAAATAATTAATATTTTAAAAATAAAACCTAAAATAATA-T 6698 Query: 794 ATTTAATTTATACTAGCTAGAACCCTAGATGAACATTCTACAATTACA-CTATTTCAA-A 737 A T AATT ATA T TA A T AT A ATT TA TTA A CTA T A A Sbjct: 6699 AATAAATT-ATATTTATTATATTATTTTATTTAAATT-TAG--TTAAAGCTAAATAATTA 6754 Query: 736 GGGATAGTATTTTTCAAGAAATAAAAAGA-TCAAAAGGAGA-TACACTGGGCAAAGGAGA 679 G AT TATT TT AA AAAT A A GA T AAA A TA ACT AA A A Sbjct: 6755 GCAATT-TATTGTT-AATAAATCATATGAATTTAAAAAATTCTA-ACTAAAAAATTTATA 6811 Query: 678 CC-AAATG-TCTAATTCAAATGCTCTGGGAACACTCCCACCCA-ACAGG--AATTTTATA 624 AAA T TAA AAAT TC AA A T CA AC AA T TA Sbjct: 6812 TTTAAAAAATTTAAA--AAATTTTCATT-AATATTTTCAATATTACGCTCTAAATATAAG 6868 Query: 623 CTATTTAAATATAACCAATATGAACAAGTATTAGCTAAGAAACTTTGATTG-TACATTTA 565 CTATTTAAATA A AA AT A AA ATTA TAA AA TT AT TA ATT A Sbjct: 6869 CTATTTAAATAAATTTAAAATAATTAAAAATTAATTAAATAAATTA-ATAAATAAATTAA 6927 Query: 564 C-ACTCTAAACT-GACAAA 548 A TAAA T G AAA Sbjct: 6928 ATAAATTAAAATCGTTAAA 6946 Score = 151 (22.7 bits), Expect = 0.00020, Sum P(2) = 0.00020 Identities = 217/381 (56%), Positives = 217/381 (56%), Strand = Minus / Plus Query: 971 AACTAAAAAAAAAATTAATTTTAGGATTTTAAGTTAACAGATCACAAAAACAAATACTAT 912 AA TAAA AAAAAATTAATTTT A T A TT A AT AA A ACT Sbjct: 12155 AATTAAATAAAAAATTAATTTTTTTAAAATCAATTTTTAAATTTTAAGTTAATGAACTTG 12214 Query: 911 CAGGTGTACACTGCATTGCTATTTAAAGCTGCCTGTGAA--TTTCTGTGATGCATTGGAC 854 A GTA A T TTG A T AA T T AA TTTCT T A TT AC Sbjct: 12215 AATAAGTATA-TATTTTGAAAATATAATATAGAAATAAAATTTTCTATTAACTTTTTTAC 12273 Query: 853 AGGGTGCAAATACTATAATATACTAAATATCCTTCACA-ACC-AAAGCTTAATTTACAAC 796 T AA TA TA AAT TA TA TA CTT A A AC AAA TT TTTA AA Sbjct: 12274 TTATTTTAA-TA-TA-AAT-TAATAT-TAAACTTTAAATACATAAAAATTCTTTTATAAA 12328 Query: 795 -TATTTA-AT-TTATACTAGCTAGAACCCTAGATGAACATTCTACAATTACAC-TAT-TT 741 TAT A AT TTA A A TA AAC A AT AA ATT T CA TT AC TAT TT Sbjct: 12329 ATATAAATATATTAAATAAATTATAACTA-ATATTAATATT-T-CAGTTCAACATATATT 12385 Query: 740 CA--AAGGGATAGTATTT--TTCAAGAAATAAAAAGATCAAAAGGAGATACACTGGGCAA 685 A AA AT TAT TTC AG A AAA A TC AA A ATA A T CAA Sbjct: 12386 TATTAATTTATCATATCGAATTCGAGGTA-AAATACCTCGAATTCAAATA-ATTAAACAA 12443 Query: 684 AGGAGACC-AAATGTCT--AATTCAAATGCTCTGGG-AACACTCCCACCCAACAGGAATT 629 A GA AAAT T AA T AA T TG AA A T A CCA A AAT Sbjct: 12444 ATATGAAATAAATAAATTAAAATAAATTTAATTGATCAATATTTAAATCCATAA--AATA 12501 Query: 628 TTATACTATTTAAATATAACCAATATGAACA-AGTATT 592 TTA A T TT AAA ATAAC TAT AA A A TATT Sbjct: 12502 TTA-A-TCTT-AAA-ATAACTCTTATAAATATAATATT 12535 >U40719 Rattus norvegicus S-adenosylmethionine decarboxylase (AMDP3) Length = 3433 Plus Strand HSPs: Score = 359 (53.9 bits), Expect = 4.0e-06, P = 4.0e-06 Identities = 107/141 (75%), Positives = 107/141 (75%), Strand = Plus / Plus Query: 2190 AAAAAAGGGAGTTGTCAAGGCT-GAAAA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGAT 2247 AAAAAAG A T AA T G AAA AAG AAGAAAAAGAAGGA GAG AGGA A Sbjct: 520 AAAAAAGTTAATATAAAATTATAGCAAAGAAG-AAGAAAAAGAAGGAGGAGAAGGAGAAG 578 Query: 2248 GA-GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA--AGAAGATGAAGATGAAGAA 2304 GA GGA GA GAAGAGGA GAGGAGGAG AGGA GA GA AGAAGA GAAGA GAAGAA Sbjct: 579 GAAGGAGGAGGAAGAGGAAGAGGAGGAGAAGGAGGAAGAGGAGAAGAAGAAGAAGAAGAA 638 Query: 2305 GAAGATGATGATGATGAATAAG 2326 GAAGA GA GA GA GAA AAG Sbjct: 639 GAAGAAGAAGAAGAAGAAGAAG 660 Score = 348 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05 Identities = 96/122 (78%), Positives = 96/122 (78%), Strand = Plus / Plus Query: 2205 CAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAG-ATGAGGAAGATGAAGAGG 2263 CAA G GAA AAA AAGAA AG AG A GAG AGGAAG A GAGGAAGA GAAGAGG Sbjct: 544 CAAAGAAGAAGAAA--AAGAAGGAGGAGAAGGAGAAGGAAGGAGGAGGAAGAGGAAGAGG 601 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 A GAG AGGAGGA GA GA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA Sbjct: 602 AGGAGAAGGAGGAAGAGGA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 660 Query: 2324 AAG 2326 AAG Sbjct: 661 AAG 663 Score = 328 (49.2 bits), Expect = 0.00010, P = 0.00010 Identities = 112/159 (70%), Positives = 112/159 (70%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCT-GATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAA-AGCAAGAAA 2226 AAA GAA G GA G AG AA AAGG AG G A AGG GA A AG A GA Sbjct: 556 AAAAGAAGGAGGAGAAGGAG-AAGGAAGG-AGGAGGAAGAGGAAGAGGAGGAGAAGGAGG 613 Query: 2227 AAGAAG-GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AAGA G GAAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GA Sbjct: 614 AAGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 673 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGAAGA GAAGA GAAGAAGAAGA GA GA A GAA AAG Sbjct: 674 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAAGAACAAG 714 Score = 317 (47.6 bits), Expect = 0.00033, P = 0.00033 Identities = 111/157 (70%), Positives = 111/157 (70%), Strand = Plus / Plus Query: 2171 AAGGAA-AGCCTGATGCAGCAAAAAAG-GGAGTTGTCA-AGGCTGAAAAA-AGCAAGAAA 2226 AAGGA AG GA G AG AA A G GGA G A AGG GA AA AG AAGA Sbjct: 561 AAGGAGGAGAAGGA-GAAGGAAGGAGGAGGAAGAGGAAGAGGAGGAGAAGGAGGAAGAGG 619 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 A GAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAA Sbjct: 620 A-GAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 677 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA GAAGA GAAGAAGAAGA GA A GA AA AAG Sbjct: 678 GAAGAAGAAGAAGAAGAAGAAGAAGAACAAGAACAAGAAG 717 Score = 316 (47.4 bits), Expect = 0.00037, P = 0.00037 Identities = 112/159 (70%), Positives = 112/159 (70%), Strand = Plus / Plus Query: 2171 AAGGAA-AGCCTGATGCAGCAAAAAAG-GGAGTTGTCA-AGGCTGAAAAA-AGCAAGAA- 2225 AAGGA AG GA G AG AA A G GGA G A AGG GA AA AG AAGA Sbjct: 561 AAGGAGGAGAAGGA-GAAGGAAGGAGGAGGAAGAGGAAGAGGAGGAGAAGGAGGAAGAGG 619 Query: 2226 A-AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA G Sbjct: 620 AGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 678 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 AAGAAGA GAAGA GAAGAAGAAGA A GA A GAA AA Sbjct: 679 AAGAAGAAGAAGAAGAAGAAGAAGAACAAGAACAAGAAGAA 719 >U51243 Human alpha-albumin gene, complete cds. Length = 24,454 Plus Strand HSPs: Score = 358 (53.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06 Identities = 110/147 (74%), Positives = 110/147 (74%), Strand = Plus / Plus Query: 2175 AAAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAAAA-AGCAAGAAAAAGAAG 2232 AAAG GA GCAG AAA AAGG AG G AAGG GA AA AG A GA AAAGA G Sbjct: 4658 AAAGAA-GAAGCAGAAAACAAGG-AGAAGGAGAAGGAGGAGAAGGAGAAGGAGAAAGA-G 4714 Query: 2233 GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGAT 2292 A GAG AGGA GA GAGGAAGA GAAGAGGA GAGGA GAGGA GAAGA GAAGAA A Sbjct: 4715 AAGGAGAAGGA-GAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAAAA 4773 Query: 2293 GAAGATGAAGAAGAAGATGATGATGATGA 2321 GAAGA GAAGAAGAAGA GA G GA GA Sbjct: 4774 GAAGAGGAAGAAGAAGAAGAAGGGGAGGA 4802 Score = 348 (52.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05 Identities = 112/151 (74%), Positives = 112/151 (74%), Strand = Plus / Plus Query: 2175 AAAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAAAA-AGCAAGA-AAA-AGA 2230 AAAG GA GCAG AAA AAGG AG G AAGG GA AA AG A GA AAA AGA Sbjct: 4658 AAAGAA-GAAGCAGAAAACAAGG-AGAAGGAGAAGGAGGAGAAGGAGAAGGAGAAAGAGA 4715 Query: 2231 AGGAAGAGGAGGA-AG-ATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 AGGA AGGAG A AG A GAGGAAGA GAAGAGGA GAGGA GA GA GAAGA AAGA Sbjct: 4716 AGGAGAAGGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAAAAGA 4775 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 AGA GAAGA GAAGAAGAAG GA GA GA GA Sbjct: 4776 AGAGGAAGAAGAAGAAGAAGGGGAGGAGGAGGA 4808 Score = 293 (44.0 bits), Expect = 0.0033, Sum P(2) = 0.0033 Identities = 95/125 (76%), Positives = 95/125 (76%), Strand = Plus / Plus Query: 2207 AGGCTGAAAA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG-AGGA 2264 A GC GAAAA AAG A GAA AGAAGGA GAG AGGA A GAG AAGA GAAG AG A Sbjct: 4665 AAGCAGAAAACAAGGA-GAAGGAGAAGGAGGAGAAGGAGAAGGAGAAAGA-GAAGGAGAA 4722 Query: 2265 TGAG--GAGGAGGAGGAAGATGAAGA---AGATGAAGATGAAGAAGAAGATGATGATGAT 2319 GAG GAGGA GAGGAAGA GAAGA AGA GAAGA GAAGAAGAA A GA GA GA Sbjct: 4723 GGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAAAAGAAGAGGAA 4782 Query: 2320 GAATAAG 2326 GAA AAG Sbjct: 4783 GAAGAAG 4789 Score = 286 (42.9 bits), Expect = 0.0067, Sum P(2) = 0.0066 Identities = 118/178 (66%), Positives = 118/178 (66%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAGGA A G G A A GAG AG AA AG GA G AG A AA AGG AG G Sbjct: 4681 GAAGGAGAAGGAGG-AGAAGGAGAAGGAGAAAGAGAAGGA-GAAGGAGAAGAGGAAGAGG 4738 Query: 2204 TCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAG--GAGGAAGATGAGGAAGATGAAG 2260 AGG GA AA AG AAGAA AAGAAG AA AG GAGGAAGA GA GAAGA G G Sbjct: 4739 AAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAAAAGAAGAGGAAGAAGAAGAAGAAGGGG 4798 Query: 2261 AGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 AGGA GAGGAGGAGGAGGA G GAAGA GA G AG G GAAG A GA GA G G Sbjct: 4799 AGGAGGAGGAGGAGGAGGAGGTGGAAGA-GAAGGAGGGGGGGAAGGGAAGGA-GAAGGGG 4856 Query: 2321 AA 2322 AA Sbjct: 4857 AA 4858 Score = 156 (23.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06 Identities = 98/162 (60%), Positives = 98/162 (60%), Strand = Plus / Plus Query: 1954 TGTTA-TAATGATCTTGTATTTTTATGTTCATTTAT-TGAAGTTCTAGTTATTTCTGGAG 2011 TGT A TAA CTTGT TTT T T T C TTTAT T A GT CT TT TTTCT Sbjct: 3533 TGTAAGTAAATTGCTTGTGTTTCTTT-TCCTTTTATCTTATGT-CT--TTCTTTCTCTTT 3588 Query: 2012 -TTGCTGTGGATCTACAGATACGTGATATTTTGGTATAACTAGAATCTTGATTTCTTTCA 2070 TT CT T TCT T C T T T TT T T T TCTT TTTC TTC Sbjct: 3589 CTTTCTTTCTTTCTTTCTTT-CTTTCTTTCTTTCTTTCTTTCTT-TCTTTCTTTCATTCT 3646 Query: 2071 TAAAGTTCTGCCATGTTCTATTTCTTTCCTTAATCTTTTTTTCTT 2115 T TTCT C T TT T TTTCTTTCCTT T TTTTTTTCTT Sbjct: 3647 TTCT-TTCTTCTTTCTT-TCTTTCTTTCCTTCTTTTTTTTTTCTT 3689 >AC000022 Genomic sequence from Human Y, complete sequence. Length = 43,795 Plus Strand HSPs: Score = 352 (52.8 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06 Identities = 92/115 (80%), Positives = 92/115 (80%), Strand = Plus / Plus Query: 2212 GAA-AAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 GAA AAAAG AA AA AAGAAG AAGA GAGGAAGA G GGAAGA GAAGAG A GA G Sbjct: 38902 GAAGAAAAGAAAAAAGAAGAAG-AAGAAGAGGAAGAAGGGGAAGAAGAAGAGAAGGAAGC 38960 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GGA GAGGAAGA GAAGAAG GAAGA GAAGAAGAAGA GA G GA GAA AAG Sbjct: 38961 GGAAGAGGAAGAAGAAGAAGGAGAAGAGGAAGAAGAAGAAGAAGCAGAAGAAGAAG 39016 Score = 336 (50.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05 Identities = 128/187 (68%), Positives = 128/187 (68%), Strand = Plus / Plus Query: 2183 ATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAG 2241 ATG AG A AAAAG A G AAG GAA AA AG AAGAA GAAG AAGA GAG Sbjct: 38898 ATG-AGAAGAAAAGAAAAAAG--AAGAA-GAAGAAGAGGAAGAAGGGGAAG-AAGAAGAG 38952 Query: 2242 GAAGATGAGGAAGATGAAGAGGATGA-GGAGGAGGAGGAAGATGAAGAAGATGAAGATGA 2300 A GA G GGAAGA GAAGA GA GA GGAG AG AGGAAGA GAAGAAGA G AGA GA Sbjct: 38953 AAGGAAGCGGAAGAGGAAGAAGAAGAAGGAGAAG-AGGAAGAAGAAGAAGAAGCAGAAGA 39011 Query: 2301 AGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTAT 2360 AGAAGAAGA GA GA GA GAA AAG G A GCA T TTTTT TT CT T Sbjct: 39012 AGAAGAAGAGGAGGAAGAAGAAGAAGAAGAGAGAAAAGCA-TGTTTTTCAGGTTA-CTCT 39069 Query: 2361 AAAGCATTT 2369 AAG A TT Sbjct: 39070 CAAGAAGTT 39078 Score = 306 (45.9 bits), Expect = 0.00052, Sum P(2) = 0.00052 Identities = 114/164 (69%), Positives = 114/164 (69%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAA-AAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AAG AAAG A G AG A AA AAG G G G AAGG GAA AA G AAGA AA G Sbjct: 38903 AAGAAAAGAAAAAAGAAGAAGAAGAAGAG-GAAG--AAGGG-GAAGAA-G-AAGAGAAGG 38956 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 AAG GA GAGGAAGA GA GAAG GAAGAGGA GA GA GA GA G AGA GAAGAA Sbjct: 38957 AAGCG-GAAGAGGAAGAAGAAGAAGGAGAAGAGGAAGAAGAAGAAGAAGCAGAAGAAGAA 39015 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCT 2334 GA GA GA GAAGAAGAAGA GA GA GA GAA A TG TT T Sbjct: 39016 GAAGAGGAGGAAGAAGAAGAAGAAGA-GA-GAAAAGCATGTTTTT 39058 Score = 305 (45.8 bits), Expect = 0.00057, Sum P(2) = 0.00057 Identities = 87/114 (76%), Positives = 87/114 (76%), Strand = Plus / Plus Query: 2213 AAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAG-ATGAAGAGGATGAGGAG 2271 AAAAAA AA AAAAAGAAG AAGA GAGGA GA GAGGA G A G GAGGA GAGGAG Sbjct: 38832 AAAAAAAAAAAAAAAAGAAG-AAGAAGAGGAGGAGGAGGAGGGAGGGGGAGGAGGAGGAG 38890 Query: 2272 GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAGGAG A GA GAAGAA A AA A GAAGAAGAAGA GA GA GA G AAG Sbjct: 38891 GAGGAGAATGA-GAAGAAAAGAAAAAAGAAGAAGAAGAAGAGGAAGAAGGGGAAG 38944 Score = 235 (35.3 bits), Expect = 0.61, Sum P(2) = 0.46 Identities = 79/115 (68%), Positives = 79/115 (68%), Strand = Plus / Plus Query: 2212 GAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 GAA A AG A GA A G AGG GAGGAGGA GA GAGGA ATGA GA GA AG A Sbjct: 38854 GAAGAGGAGGAGGAGGAGGGAGGGGGAGGAGGAGGAGGAGGAGAATGA-GAAGAAAAGAA 38912 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GA GAAGA GAAGA GA GAAG GAAGAAGAAGA A GA G GAA A G Sbjct: 38913 AAAAGAAGAAGAAGAAGAGGAAGAAGGGGAAGAAGAAGAGAAGGAAGCGGAAGAGG 38968 Score = 167 (25.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06 Identities = 167/255 (65%), Positives = 167/255 (65%), Strand = Plus / Plus Query: 1873 GTTAGGATCTGGTA---GA-TAATTGC--ACCTCAATGAGGCAT-AACTTTGCAAATATT 1925 GT GGAT TGGTA GA TAAT GC ACCTCAA A AT AACTTTG A A ATT Sbjct: 16505 GTCTGGATTTGGTATCAGAGTAAT-GCTGACCTCAAATA---ATGAACTTTGAAGA-ATT 16559 Query: 1926 AGACTATGCCA-TTTCATGAGTTATAGATTGTTATAATGATCTTG-TATT-TTTATGTTC 1982 CT T C A TTTC TG G A G TTG A AA GA TTG TATT TTTAT T Sbjct: 16560 CT-CT-T-CAACTTTC-TG-GA-AGGGTTTG--AGAA-GAA-TTGCTATTATTTATTTAA 16609 Query: 1983 ATTTAT--TGAAGTTCTAG--TT-ATTTCTGGAGTTGCTGTGGATCTACAGATACGTGAT 2037 ATTT T TG A TTC AG TT A C AGTT CT G T T GAT G G Sbjct: 16610 ATTTGTGGTGTAATTC-AGCATTGAAGCCCTCAGTTCCTCAGT-TATTT-GATGGGAGGC 16666 Query: 2038 ATTTTGGTATAACTAGAATCTTGATTTCTTTCATAAA-GTTCTGC-CATGTT--CTATTT 2093 TTT TA A T AATCTT TT CT CATAA G TCTG CA GTT CTATTT Sbjct: 16667 TGTTTATTACAGATTCAATCTTC-TTACT--CATAATTGGTCTGTTCAGGTTTTCTATTT 16723 Query: 2094 CTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTT 2127 CTTT TT T TTTTTTT TT T T TTTT Sbjct: 16724 CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16757 >U08273 Rattus norvegicus Wistar polymeric immunoglobulin receptor (PIGR) Length = 999 Plus Strand HSPs: Score = 350 (52.5 bits), Expect = 4.9e-06, P = 4.9e-06 Identities = 112/155 (72%), Positives = 112/155 (72%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AAAAGCAAGAAAAAG 2229 AGGA AG GA G AG A A GGAG G A G GAA AAAAG AAGAA AAG Sbjct: 407 AGGAGGAGGAGGAGG-AGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAAAG-AAGAAGAAG 464 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 AAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGAA Sbjct: 465 AAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 523 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GAAGA GAAGAAGAAGA GA GA GA GAA AG Sbjct: 524 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATAG 560 Score = 343 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05 Identities = 121/167 (72%), Positives = 121/167 (72%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAA-AGCCTGATGCAGCAAAAA-AGG-G-AGTTGTCA-AGGCTGAAAA-AA 2218 GAG AAAGGA AG GA G AG A A AGG G AG G AGG GA AA AA Sbjct: 385 GAGAAAAAGGAGGAGGAGGAGG-AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGAA 443 Query: 2219 GCAAGAA--AAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGA 2276 G AAGAA AAAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA Sbjct: 444 G-AAGAAGAAAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 501 Query: 2277 GGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 502 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 551 Score = 285 (42.8 bits), Expect = 0.0057, P = 0.0057 Identities = 121/180 (67%), Positives = 121/180 (67%), Strand = Plus / Plus Query: 2153 TTGCTGCATATCGAGCTAAAGGAAAGCCTG-ATGCAGCAAAAAAGGGAGTTGTCA-AGGC 2210 T GCT C TA GAG AAGG AGCCTG A CA AA A GG TT A A GC Sbjct: 282 TGGCTACCTAGTGAGTGTAAGGCCAGCCTGGAATCAATAAGAGTTGGT-TTCAAAGAAGC 340 Query: 2211 TGAAA-A-AAGCAAGAAAAAGAA--GGAAGAGGAGGAAGATGAGGAAGATGAAG-AGGAT 2265 G A A AAG A GAA A GAA GGA GAGGAG A G GAGGA GA AAG AGGA Sbjct: 341 AGGAGGAGAAGGAGGAACAGGAACAGGAGGAGGAGCAGGGGGAGGA-GAAAAAGGAGGAG 399 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGA--AGAAGAAGATGATGATGATGAAT 2323 GAGGAGGAGGAGGA GA GA GA GA GA GA GA AGAAGAAGA GA GA A GAA Sbjct: 400 GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAAA-GAAG 458 Query: 2324 AAG 2326 AAG Sbjct: 459 AAG 461 >D87017 Human (lambda) DNA for immunoglobin light chain. Length = 40,162 Plus Strand HSPs: Score = 358 (53.7 bits), Expect = 5.3e-06, P = 5.3e-06 Identities = 148/222 (66%), Positives = 148/222 (66%), Strand = Plus / Plus Query: 2153 TTGCTGCATATCGAGCTAAAGGAA-AGCCT-G-ATG-CAGCAAAAAAGGGAGTTGTCAAG 2208 T G TG AT T GA T AG AGCCT G AT CA CA A AG AG TG A Sbjct: 37827 TGGTTGTATCTGGAATTCCAGACTCAGCCTTGCATTTCA-CATAGCAGATAGATGATGAT 37885 Query: 2209 GCTGAAAAAAGC-AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGA 2267 G TG A AA G AAGAA AAG AGGA GAGGAGGAA A AGGAAGA GAAGA GA GA Sbjct: 37886 GATGGAGAAGGAGAAGAAGAAGGAGGAGGAGGAGGAA-AGAAGGAAGAAGAAGAAGAAGA 37944 Query: 2268 GGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAA-GATGATGATGATGAATAAG 2326 GGAGGAGGA GAAGA GA GAAG GAAGA GAAGAAG A GA GA GA GA GAATA G Sbjct: 37945 GGAGGAGGAAGAAGAAGACGAAGG-GAAGAAGAAGAAGGATGAGGAGGAGGAGGAATA-G 38002 Query: 2327 TTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACC 2373 G CT C AG TT T T T TTGTC T AA A TA CC Sbjct: 38003 ACAGA-CTGACAAAGATTCTCTACTGTTGTCACTTAACAACATATCC 38048 Score = 254 (38.1 bits), Expect = 0.29, P = 0.25 Identities = 134/200 (67%), Positives = 134/200 (67%), Strand = Plus / Plus Query: 2103 ATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGG-ATATTGCTGC-A 2160 ATCT T T TT T CTG T TCC CT GC TTG A A AT GC G A Sbjct: 37819 ATCTGTACTGGTTGTAT-CTGGAAT-TCCAGACTCAGCCTTGCATTTCACATAGCAGATA 37876 Query: 2161 TATCGA-GCTAAAGGA-AAGCCTGATGCAGCAAAAAAG-GGAGTTGTCAAGGCTGAAAAA 2217 AT GA G T A GGA AAG GA G AG AA A G GGAG G AAG GAA AA Sbjct: 37877 GAT-GATGATGATGGAGAAGGA-GAAGAAG-AAGGAGGAGGAGGAGGAAAGAAGGAAGAA 37933 Query: 2218 AGCAAGAAAAAGA--AGGAAGAGGAGGAAGATGA--GGAAGATGAAGA-GGATGAGGAGG 2272 G AAGAA AAGA AGGA GA GA GAAGA GA GGAAGA GAAGA GGATGAGGAGG Sbjct: 37934 -G-AAGAAGAAGAGGAGGAGGAAGAAGAAGACGAAGGGAAGAAGAAGAAGGATGAGGAGG 37991 Query: 2273 AGGAGGAAGATGA-AGAA-GATGAAGAT 2298 AGGAGGAA A GA AGA GA AAGAT Sbjct: 37992 AGGAGGAATA-GACAGACTGACAAAGAT 38018 >AC004044 Arabidopsis thaliana BAC T5J8 from chromosome IV, top arm, complete Length = 98,527 Plus Strand HSPs: Score = 358 (53.7 bits), Expect = 5.4e-06, P = 5.4e-06 Identities = 180/288 (62%), Positives = 180/288 (62%), Strand = Plus / Plus Query: 2046 ATAACTAGAATCTTGATTTCTTTCATA-AAGTTCTGCCATGTTCTATTTCTTTCCTTAAT 2104 ATA C G AT TGA TC T A A AAG C G C T TT T TTC C T A Sbjct: 53725 ATAGCC-GTATGGTGAAATCGTATAAAGAAGA-CGGTCGTCTTGTTGTTCAAGCAATTAG 53782 Query: 2105 CTTTTTTTCTTC-CCTACT-G-TTT-TATCCTCCCTTTGCTTTGGAAGGATAT-TG-CTG 2158 TTT TTCT C CCT T G TTT TATC C T G GGAAGG T T CTG Sbjct: 53783 GGTTTGTTCTCCACCTCGTTGCTTTGTATCTGAACGTCGTGAAGGAAGGCTTCGTCTCTG 53842 Query: 2159 CATATCG-AGC--TAAAGGAA-AGCCT-GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGA 2213 TATC AG T A GAA AGCC GA GCAG A AA AG G G A G TGA Sbjct: 53843 TTTATCACAGAATTCATTGAATAGCCAAGACGCAGAAGAAGAGTTTGAAGAAGAAGATGA 53902 Query: 2214 AAAA-AGCAAGAAAAAG-A-AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 A A A CAA A A G A AGGAAGA GA GAAGA GA GAAGA GAAGA GA GA GA Sbjct: 53903 AGATGATCAATACGATGCAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 53962 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA G Sbjct: 53963 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGACGAGGAGG 54012 Score = 327 (49.1 bits), Expect = 0.00014, P = 0.00014 Identities = 177/281 (62%), Positives = 177/281 (62%), Strand = Plus / Plus Query: 2046 ATAACTAGAATCTTGATTTCTTTCATA-AAGTTCTGCCATGTTCTATTTCTTTCCTTAAT 2104 ATA C G AT TGA TC T A A AAG C G C T TT T TTC C T A Sbjct: 53725 ATAGCC-GTATGGTGAAATCGTATAAAGAAGA-CGGTCGTCTTGTTGTTCAAGCAATTAG 53782 Query: 2105 CTTTTTTTCTTC-CCTACT-G-TTT-TATCCTCCCTTTGCTTTGGAAGGATATTG-CTGC 2159 TTT TTCT C CCT T G TTT TATC C T G GGAAGG T T G CT C Sbjct: 53783 GGTTTGTTCTCCACCTCGTTGCTTTGTATCTGAACGTCGTGAAGGAAGGCT-TCGTCT-C 53840 Query: 2160 ATATCGAGCTAAAGGAAAGCCT-GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAA 2218 T T A C A AG AA C T GA AGC AA A G AG G AG TGAA AA Sbjct: 53841 -TGTTTATC-ACAG-AATTCATTGAAT-AGCCAAGACGC-AGAAGAAGAGTTTGAAGAA- 53894 Query: 2219 GCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGG 2278 G AAGA AAGA G A A A GA G GAGGAAGA GAAGA GA GA GA GA GA G Sbjct: 53895 G-AAGATGAAGATG-ATCAATACGATGCAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAG 53952 Query: 2279 AAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 53953 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 54000 Score = 308 (46.2 bits), Expect = 0.0010, P = 0.0010 Identities = 94/129 (72%), Positives = 94/129 (72%), Strand = Plus / Plus Query: 2198 GAGTTGTCAAGGCTGAAAA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGAT 2256 GA T G CAAG C A AA AAG A AAGAAG AAGA GA GA GAT A A GAT Sbjct: 53861 GAATAGCCAAGACGCAGAAGAAG-AGTTTGAAGAAG-AAGATGAAGATGATCAATACGAT 53918 Query: 2257 GAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGAT 2316 G AGAGGA GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA Sbjct: 53919 GCAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 53978 Query: 2317 GATGAATAAG 2326 GA GAA AAG Sbjct: 53979 GAAGAAGAAG 53988 Minus Strand HSPs: Score = 226 (33.9 bits), Expect = 5.5, P = 1.0 Identities = 118/194 (60%), Positives = 118/194 (60%), Strand = Minus / Plus Query: 2353 AGAAAAAAAAAACTGCGCTAGAACCAACTTATTCATCATCATCATCTTCTTCTTCATCTT 2294 A AA AAA AA C C A A CC A T TCATCATCAT TTCT TCATCTT Sbjct: 14848 ACAACAAATAATCGACATCAAATCCCATTCCCATGTCATCATCATTTTCTGACTCATCTT 14907 Query: 2293 CATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTT 2234 CATC T CATC TC T TC TCATCC TCATCTTC TC TC C TC TC T Sbjct: 14908 CATCCGATACATCGTCAG--TG-TCGTCATCCGAGTCATCTTCTTCGTCCACTTCATCGT 14964 Query: 2233 CCTTCTTTTTCTTGCTTTTT-TCAGCCTT-GA-CAACTCCCTTTTTTGCTGCATCAGGCT 2177 CCT TT C T T T T TCAGCCT G C CT C T C CAT A GCT Sbjct: 14965 CCTCAGCTTCCATCATCTCTATCAGCCTCAGCTCTTCTTCATCGCACACACCATAACGCT 15024 Query: 2176 TTCCTTTAGCTCGATAT 2160 TTCCT A CT GA AT Sbjct: 15025 TTCCTGAA-CT-GAAAT 15039 >AC004155 Mus musculus DNA from BAC 10818 containing the Ercc-4 gene, Length = 128,026 Plus Strand HSPs: Score = 358 (53.7 bits), Expect = 5.4e-06, P = 5.4e-06 Identities = 120/163 (73%), Positives = 120/163 (73%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAA 2222 GAG A AGGA AAG GA G AG A A AGG AG G AGG GAA AA AG A Sbjct: 60054 GAGGAAGAGGAGAAGAG-GAGG-AGGAGGAGAGG-AGGAGGGGAGGAGGAAGAAGAGGA- 60109 Query: 2223 GAAAAAGA--AGGA-AGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGA 2279 GAA A GA AGGA A A GA GA GA GAGGAAGA GAAGAGGA GAGGA GAGGA GA Sbjct: 60110 GAAGAGGAGGAGGAGAAAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGA 60169 Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 60170 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 60216 Score = 347 (52.1 bits), Expect = 1.7e-05, P = 1.7e-05 Identities = 97/130 (74%), Positives = 97/130 (74%), Strand = Plus / Plus Query: 2194 AAGGGAGTTGTCA-AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGA 2252 A GGGAG G A A G GA AA AG A GA A AA GAAGAGGA GA GA GAGGA Sbjct: 60089 AGGGGAGGAGGAAGAAGAGGAGAAGAGGAGGAGGAGAAAAGAAGAGGAAGAGGAAGAGGA 60148 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGA 2312 AGA GAAGAGGA GAGGA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA Sbjct: 60149 AGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 60208 Query: 2313 TGATGATGAA 2322 GA GA GAA Sbjct: 60209 AGAAGAAGAA 60218 Score = 291 (43.7 bits), Expect = 0.0060, P = 0.0060 Identities = 97/129 (75%), Positives = 97/129 (75%), Strand = Plus / Plus Query: 2201 TTGTCAAGGC--TGAAAAAAGCA-AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATG 2257 T G CAAGGC TGAA A G AG A AG AGGAAGAGGAG AAGA GAGGA GA G Sbjct: 60022 TGGACAAGGCAATGAAGTAGGAGGAGGAGGAGGAGGAAGAGGAG-AAGAGGAGGAGGAGG 60080 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGA--AGAAGATGAAGATGA-AGAAGAAGATGATG 2314 A GAGGA GAGG GGAGGAGGAAGA GA AGAAGA GA GA GA A AAGAAGA GA G Sbjct: 60081 A-GAGGAGGAGG-GGAGGAGGAAGAAGAGGAGAAGAGGAGGAGGAGAAAAGAAGAGGAAG 60138 Query: 2315 ATGATGAATAAG 2326 A GA GA AAG Sbjct: 60139 AGGAAGAGGAAG 60150 Score = 124 (18.6 bits), Expect = 0.00052, Sum P(2) = 0.00052 Identities = 68/107 (63%), Positives = 68/107 (63%), Strand = Plus / Plus Query: 1599 TAATAAGATTAAGGAAAT-CTATAACTCTTATAGTTCAGTAAATTGAAATATTAAATACT 1657 TAATAAGATTAA GAA C TAA T T ATAG AGTAA TT T TT A T C Sbjct: 55808 TAATAAGATTAAAGAACCACGCTAA-TATCATAGCAAAGTAATTTATTTTCTTCA-T-CA 55864 Query: 1658 TAATTT-TCAGCT-TTAGTCAT-TCTGAAAAG-TGTTTATTTCTAGATGT 1703 AAT T AGC TT TCAT TCT A AAG TG T TCTA AT T Sbjct: 55865 AAATAAATAAGCAATTTTTCATATCTCACAAGATGGTGGACTCTATATTT 55914 >AF040950 Mus musculus killer cell inhibitory-like protein p91A gene, exon Length = 994 Minus Strand HSPs: Score = 349 (52.4 bits), Expect = 5.4e-06, P = 5.4e-06 Identities = 89/113 (78%), Positives = 89/113 (78%), Strand = Minus / Plus Query: 2325 TTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTC 2266 || ||| || || || ||||||||||| ||||| |||||||| ||||| || || || || Sbjct: 351 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTC 410 Query: 2265 ATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTT 2213 || ||||| ||||| || ||||| || ||||| ||||| || ||| || ||| Sbjct: 411 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCTTTTTGTTTGTTT 463 Score = 345 (51.8 bits), Expect = 8.4e-06, P = 8.4e-06 Identities = 89/114 (78%), Positives = 89/114 (78%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 ||| ||| || || || ||||||||||| || || |||||||| ||||| || || || | Sbjct: 353 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTT 412 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTT 2213 | || ||||| ||||| || ||||| || |||| ||||||||| || ||| || Sbjct: 413 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCTTTTTGTTTGTTTGTT 466 Score = 326 (48.9 bits), Expect = 6.7e-05, P = 6.7e-05 Identities = 88/111 (79%), Positives = 88/111 (79%), Strand = Minus / Plus Query: 2324 TATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCA 2265 TAT TC TC TC TCTTCTTCTTC TCTTC TCTTC TC TCTTC TC TC TC TC Sbjct: 346 TATGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCT 405 Query: 2264 TCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTT-TTTCTTGCTTTTT 2214 TC TCTTC TCTTC TC TCTTC TC TCTTC TTCTT TTTCTT CTTTTT Sbjct: 406 TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TTCTTCTTTCTT-CTTTTT 455 Score = 301 (45.2 bits), Expect = 0.0010, P = 0.0010 Identities = 117/173 (67%), Positives = 117/173 (67%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TC TCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 365 CTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 424 Query: 2266 CATCCTCTTCATCTTCCTCAT-CTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTT-CAG- 2210 C TC TCTTC TCTTC TC T CTTC T T TT TT TTT TTG TT T T C G Sbjct: 425 CTTCTTCTTCTTCTTCTTCTTTCTTCTTTTTGTTTGTTTGTTTGTTTGTTTCTGTGCTGG 484 Query: 2209 CCTTGACAACTCCCTTTTTTG-CTGCATCAGGCTTTCCTTTAGCTCGATA-TGCAG 2156 CCTTG CCT T TG C G A AGGC T CC A CT GAT TGCAG Sbjct: 485 CCTTGGTGGTGACCTCTCCTGACAGAAA-AGGCCT-CCAGAATCT-GATTCTGCAG 537 >M14483 Human prothymosin alpha mRNA, complete cds. Length = 490 Plus Strand HSPs: Score = 298 (44.7 bits), Expect = 5.9e-06, P = 5.9e-06 Identities = 130/195 (66%), Positives = 130/195 (66%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAGGA TTG G A A AG AA GGAA AG C G C GC AA GGGA T Sbjct: 192 GAAGGAAGTTGTGGAAGAGGCAGAAAATGGAAGAGAC-GCCCCTGCTAAC--GGGAATGC 248 Query: 2204 TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 T AA G GAAAA G AG A AG GA A GAGG AGA GA GAAGA GAAGA G Sbjct: 249 T-AATGAGGAAAACGGGGAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAG 307 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGA---TGAAGATGAAGAAGAAGATG-A--TGATG 2317 TG GGAGGA GAGGA GA GAAGAAGA TGA G TGA GAAGA GATG A TGA G Sbjct: 308 GTGGGGAGGAAGAGGAGGAGGAAGAAGAAGGTGATGGTGAGGAAGAGGATGGAGATGAAG 367 Query: 2318 ATGAATAAGTTGGTTCTAGC 2337 ATGA AAG TG TC AGC Sbjct: 368 ATGAGGAAGCTGAGTC-AGC 386 Score = 210 (31.5 bits), Expect = 7.5, P = 1.0 Identities = 114/185 (61%), Positives = 114/185 (61%), Strand = Plus / Plus Query: 2144 GGAAGGATATTGCTG-CATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGT 2201 GG AG A GCTG CA AT GAG TA A GAA A GA G AG AGG AG Sbjct: 263 GGGAGCAGGAGGCTGACA-AT-GAGGTAGACGAAGAAGAGGAAGAAGGTGGGGAGGAAGA 320 Query: 2202 TGTCAAGGCTGAAAAAAGCAA-GAAAAAGAAGGAAGA-GGAG--GAAGATGAGGAAGATG 2257 G AGG GAA AA G A G A GAAG A GA GGAG GAAGATGAGGAAG TG Sbjct: 321 GGAGGAGGAAGAAGAAGGTGATGGTGAGGAAG-AGGATGGAGATGAAGATGAGGAAGCTG 379 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 A G T GG AG GG AG TGAAGA GATGA GATGA GA G GAT A A G Sbjct: 380 AGTCAGCTACGGGCAAGCGGGCAGCTGAAGATGATGAGGATGACGATGTCGAT-ACCAAG 438 Query: 2318 ATGAATAAG 2326 A G A AAG Sbjct: 439 AAGCAGAAG 447 >AC002565 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-598D4, complete Length = 103,911 Minus Strand HSPs: Score = 357 (53.6 bits), Expect = 6.0e-06, P = 6.0e-06 Identities = 119/163 (73%), Positives = 119/163 (73%), Strand = Minus / Plus Query: 2360 ATAGACAAGAAAAAAAAAACTGCGC-TAGAACCAACTT--ATTCATCATCATCATCTTCT 2304 A AGA AAGAAAA AAAA GC T AA AA TT A T A C C TC TCTTCT Sbjct: 61369 AAAGAAAAGAAAAGAAAAGAAGCATGTCCAAGAAAGTTGGAATAAGCTGCTTCTTCTTCT 61428 Query: 2303 TCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCT 2244 TCTTC TCTTC TCTTCTTC TCTTC TCCTC TCCTC TCCTCTTC TC TC TC TCT Sbjct: 61429 TCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCTTCTTCCTCTTCCTCT 61488 Query: 2243 TCCTCCTCTTC--CTTCTT-TT-TCTTGCTTTTTTCAGCCTTGAC 2203 TCCTC CTTC CTTCT TT TCTTGCT T T CA CC GAC Sbjct: 61489 TCCTCTCCTTCTCCTTCTCCTTCTCTTGCTCTGT-CACCCA-GAC 61531 >U01348 Rattus norvegicus clone B-0/7 arylamine N-acetyltransferase mRNA, Length = 1385 Minus Strand HSPs: Score = 351 (52.7 bits), Expect = 6.3e-06, P = 6.3e-06 Identities = 111/150 (74%), Positives = 111/150 (74%), Strand = Minus / Plus Query: 150 CTTCCACCTCTCTGAGCACTTCTTAGAAAACTCTGAGAAGTTGACTGAAGCATCTGGGTG 91 CTTCCA CTCTC GA CA TTCTT A AACTC G GAAGTTGAC GA G TC GG TG Sbjct: 48 CTTCCATCTCTCGGAACATTTCTTCAAGAACTCGGCGAAGTTGACCGACGAGTCGGGATG 107 Query: 90 CTTCTTCTTATGCTCCTCCCGACAAGTTTGCACAAAAAATGCATATGATGACATTTTGCC 31 CTTCTTCTT TGCTCCTCC G GCAC AA AA GC TA GA GACAT TTGCC Sbjct: 108 CTTCTTCTTGTGCTCCTCCTG--------GCACGAAGAAGGCGTACGAGGACATCTTGCC 159 Query: 30 TCTCGGCTTCTTAGGATCTCCTTTGCCCAT 1 C CGGCTT TT GG TC CC TTGCCCAT Sbjct: 160 CCGCGGCTTGTTGGGGTCCCCCTTGCCCAT 189 >X13484;X15991;X15992 Mouse DNA for beta-casein Length = 13,054 Minus Strand HSPs: Score = 356 (53.4 bits), Expect = 6.3e-06, P = 6.3e-06 Identities = 126/177 (71%), Positives = 126/177 (71%), Strand = Minus / Plus Query: 2346 AAAAACTGCGCTAGAACCAACTTATTCATCAT-CATCATCTTCTTCTTCATCTTCATCTT 2288 AAAA CT C CTA AA AA TTA ATC T C TC TCTTCTTCTTC TCTTC TCTT Sbjct: 2108 AAAATCTCC-CTA-AAGTAATTTAAATATCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 2165 Query: 2287 CTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCT 2228 CTTC TCTTC TC TC TC TC TC TCTTC TCTTC TC TCTTC C TCT C TTCT Sbjct: 2166 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTCTGC-TTCT 2224 Query: 2227 TTTTCTTGCTTTT--TTCAGCCT-TGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTT 2171 TTCT GCTT T TTC GC T TG C CT C T TT T CT C TC CTTT TT Sbjct: 2225 GCTTCT-GCTTCTGCTTCTGCTTCTG-CTTCTGCTTCTTCTTCTTCTTCTTCCTTTTTTT 2282 Query: 2170 T 2170 T Sbjct: 2283 T 2283 Score = 292 (43.8 bits), Expect = 0.0053, P = 0.0052 Identities = 116/173 (67%), Positives = 116/173 (67%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCT C TCT CTTC CTTC T CT CT CT Sbjct: 2181 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTCTGCTTCTGCTTC-TGCTTCTGCT 2239 Query: 2266 CATCCT-CTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCC 2208 T CT CT C TCT C TC TCTTC TC TCTTCCTT TTTTT TT C T TTT Sbjct: 2240 TCTGCTTCTGCTTCTGCTTCTTCTTCTTCTTCTTCCTTTTTTTTTTTTCCTGTTTGGTTT 2299 Query: 2207 TT-GACAACTCCCTTTTT-TGC-T-GCATCAGGCTTTCCTTTAGCTCGATATGCAG 2156 TT GA A C TTT T T T GC C GGCT TCCT A CTC T TG AG Sbjct: 2300 TTCGAGA-CAGGGTTTCTCTATATAGCC-CTGGCTGTCCTGGAACTCACTTTGTAG 2353 Score = 285 (42.8 bits), Expect = 0.011, P = 0.011 Identities = 89/122 (72%), Positives = 89/122 (72%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTC--CTCCTCCTC 2269 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC CTTC CT CT CT Sbjct: 2169 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTCTGCTTCTGCTT 2228 Query: 2268 CTCATCCT-CTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAG 2210 CT T CT CTTC CTTC C TCT C TC TCTTC TTCTT TTC T TTTTTT Sbjct: 2229 CTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTTCTTC-TTCTTCTTCCTTTTTTTTTTTT 2287 Query: 2209 CCT 2207 CCT Sbjct: 2288 CCT 2290 >U01343 Rattus norvegicus clone A-1 arylamine N-acetyltransferase mRNA, Length = 1418 Minus Strand HSPs: Score = 351 (52.7 bits), Expect = 6.4e-06, P = 6.4e-06 Identities = 111/150 (74%), Positives = 111/150 (74%), Strand = Minus / Plus Query: 150 CTTCCACCTCTCTGAGCACTTCTTAGAAAACTCTGAGAAGTTGACTGAAGCATCTGGGTG 91 CTTCCA CTCTC GA CA TTCTT A AACTC G GAAGTTGAC GA G TC GG TG Sbjct: 51 CTTCCATCTCTCGGAACATTTCTTCAAGAACTCGGCGAAGTTGACCGACGAGTCGGGATG 110 Query: 90 CTTCTTCTTATGCTCCTCCCGACAAGTTTGCACAAAAAATGCATATGATGACATTTTGCC 31 CTTCTTCTT TGCTCCTCC G GCAC AA AA GC TA GA GACAT TTGCC Sbjct: 111 CTTCTTCTTGTGCTCCTCCTG--------GCACGAAGAAGGCGTACGAGGACATCTTGCC 162 Query: 30 TCTCGGCTTCTTAGGATCTCCTTTGCCCAT 1 C CGGCTT TT GG TC CC TTGCCCAT Sbjct: 163 CCGCGGCTTGTTGGGGTCCCCCTTGCCCAT 192 >X89811 D.melanogaster DNA for SSRP2 gene Length = 5713 Plus Strand HSPs: Score = 355 (53.3 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 125/183 (68%), Positives = 125/183 (68%), Strand = Plus / Plus Query: 1 ATGGGCAAAGGAGAT-CCTAAG--AAGCCGAGAGGCAAAATGTCATCATATGCATTTTTT 57 ATG GCA AG A CC A G AAGCC AGAGGC AATG C C TA GCAT TTT Sbjct: 3637 ATGAGCAGAGTCAAGGCCGATGCCAAGCCCAGAGGCCGAATGACCGCCTACGCATACTTT 3696 Query: 58 GTGCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCA 117 GT CAAACTTG G GAGGAGCA AA AAGAAGCA CC GATG C GT A TTC C Sbjct: 3697 GTACAAACTTGCAGAGAGGAGCACAAAAAGAAGCATCCCGATGAGACGGTGATATTCGCC 3756 Query: 118 GAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAA 177 GA TT TC GAAGTGC C GA GGTGGAAGGTAAG T AAA AT C AA A Sbjct: 3757 GAATTCTCGCGGAAGTGCGCCGAACGGTGGAAGGTAAGTAAA-TGAAATGAT-CAAATGA 3814 Query: 178 GGTAA 182 GTAA Sbjct: 3815 CGTAA 3819 >AL008725 Human DNA sequence from PAC 148E22 on chromosome 20q12-q13.12. Length = 79,227 Plus Strand HSPs: Score = 356 (53.4 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 128/184 (69%), Positives = 128/184 (69%), Strand = Plus / Plus Query: 2147 AGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCA 2206 AG ATA CT CAT TC A C AAA A A TGA G AG AA AAGG AG G Sbjct: 11910 AGAATAAGACTTCATCTCTACCAAAAA-ATATTTTGAAGAAG--AAGAAGGAAGAGGAAG 11966 Query: 2207 AGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAA--GATGAGGAAGATGAAGAGG 2263 AGG GA A AG A GAA AAGA GGAAGA GA GAA GA GA GAAGA GAAGA G Sbjct: 11967 AGGAGGAGGAGGAGGA-GAAGAAGA-GGAAGAAGAAGAAAAGAAGAAGAAGAAGAAGAAG 12024 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 A GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA Sbjct: 12025 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAG 12084 Query: 2324 AAGTTGG 2330 AAG GG Sbjct: 12085 AAGGAGG 12091 Score = 321 (48.2 bits), Expect = 0.00026, P = 0.00026 Identities = 113/162 (69%), Positives = 113/162 (69%), Strand = Plus / Plus Query: 2160 ATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCT-GAAAAA 2217 ATAT G AAG A AAG GA G AG A AGG G G AAG G AA A Sbjct: 11937 ATATTTTGAAGAAGAAGAAGGAAGAGGAAGAGGAGGAGGAGGAGGAGAAGAAGAGGAAGA 11996 Query: 2218 AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAG 2277 AG AAGAAAA GAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA Sbjct: 11997 AG-AAGAAAA-GAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 12053 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAGAAGATG-ATGATGATGA 2321 GAAGA GAAGAAGA GAAGA GAAGAAGAAGA G A GA GA GA Sbjct: 12054 GAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGGAGGAGGAGGA 12098 Score = 308 (46.2 bits), Expect = 0.0010, P = 0.0010 Identities = 108/156 (69%), Positives = 108/156 (69%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 AAG AAAG GA G AG A AA A G AG G A G GAA AA G AAGAA AAGA Sbjct: 11999 AAGAAAAGAA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-G-AAGAAGAAGA 12055 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGA-GGATGAGGAGGAGGAGGAAGATGAAGAA 2289 AG AAGA GA GAAGA GAGGAAGA GAAGA GGA GAGGAGGAGGAG AAGA GAAG Sbjct: 12056 AG-AAGAAGAAGAAGAAGAGGAAGAAGAAGAAGGAGGAGGAGGAGGAG-AAGAAGAAGGG 12113 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA G GA G GAA GA GA GA GA GAA A G Sbjct: 12114 GAGGGGGAGGGGGAATGGGAAGAGGAAGAGGAAGAGG 12150 >Z73514;U00094 S.cerevisiae chromosome XVI reading frame ORF YPL158c Length = 3145 Minus Strand HSPs: Score = 353 (53.0 bits), Expect = 7.3e-06, P = 7.3e-06 Identities = 119/170 (70%), Positives = 119/170 (70%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTT-CATCTTCATCTTCTTCATCTTCCTCCTC 2272 C AA TT TTC T TC T T TTCTT TT C TCTTC TCTTC TCATCTTC TC TC Sbjct: 543 CAAATTTCTTCCTTCTCCTTCTTTTCTTTTTTCTTCTTCTTCTTCATCATCTTCATCATC 602 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TT 2213 TC TCATC TCTTCATCTTC TCATC TC T TCTTC TTCTT TTCTT T T TT Sbjct: 603 TTCTTCATCTTCTTCATCTTCTTCATCATCATTTTCTTC-TTCTTCTTCTTCATCATCTT 661 Query: 2212 CAGCCTTGACAACTCCCTTTT-TTGCTGCATCAGGCTTTCCTTTAGCTCGAT 2162 CA C T CA CT C T TT TT CT C TC G C TT CT TA C C AT Sbjct: 662 CATCATCTTCATCTTCTTCTTCTTCCT-CGTCGGCCCTTACTGTAACGCCAT 712 Score = 345 (51.8 bits), Expect = 1.7e-05, P = 1.7e-05 Identities = 125/176 (71%), Positives = 125/176 (71%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TCATC TCATCATCTTCTTC TC TCTTCATCTTCTTCATC TC T TC TC T Sbjct: 584 CTTCATCATCTTCATCATCTTCTTCATCTTCTTCATCTTCTTCATCATCATTTTCTTCTT 643 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCT 2207 C TC TCTTCATC TC TCATC TC TC TCTTC TTCTT TTC T T C CT Sbjct: 644 CTTCTTCTTCATCATCTTCATCATCTTCATCTTC-TTCTTCTTCCTCGTCGGCCCTTACT 702 Query: 2206 -TGACAAC-TCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGC-TCGATATGCAGC-AATA 2151 T AC C TC T TTTG G A AG CT CC T AGC TC ATAT CAG AATA Sbjct: 703 GTAACGCCATCAAATATTTGG-G-AGGAG-CTA-CCATCAGCCTC-ATATTCAGTTAATA 757 Score = 321 (48.2 bits), Expect = 0.00021, P = 0.00021 Identities = 81/102 (79%), Positives = 81/102 (79%), Strand = Minus / Plus Query: 2331 ACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC 2272 | || ||| |||||| || ||||||||||| ||||| | |||||||| ||||| || || Sbjct: 597 ATCATCTTCTTCATCTTCTTCATCTTCTTCATCATCATTTTCTTCTTCTTCTTCTTCATC 656 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTT 2230 || ||||| ||||||||||| || |||||||| || || | Sbjct: 657 ATCTTCATCATCTTCATCTTCTTCTTCTTCCTCGTCGGCCCT 698 Score = 316 (47.4 bits), Expect = 0.00036, P = 0.00036 Identities = 80/101 (79%), Positives = 80/101 (79%), Strand = Minus / Plus Query: 2331 ACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC 2272 | || ||| ||||| || ||||||||||| || |||||||| || | ||||| || || Sbjct: 588 ATCATCTTCATCATCTTCTTCATCTTCTTCATCTTCTTCATCATCATTTTCTTCTTCTTC 647 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCT 2231 || ||||| |||||||| || |||||||| || ||||||| Sbjct: 648 TTCTTCATCATCTTCATCATCTTCATCTTCTTCTTCTTCCT 688 >X63507;S42523;S42569 M.musculus HOX-3.5 gene Length = 6343 Minus Strand HSPs: Score = 354 (53.1 bits), Expect = 7.4e-06, P = 7.4e-06 Identities = 126/183 (68%), Positives = 126/183 (68%), Strand = Minus / Plus Query: 2341 CTGCGCTAGAACCAACTTATT-CATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCA 2283 CTGC C CC CT ATT C TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC Sbjct: 2328 CTGCTCCTTTTCCTTCTCATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 2387 Query: 2282 TCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTC 2223 TCTTC TC TC TC TC TC TCTTC TCTTC TC TCTTC TC TCTTC TTCT TTC Sbjct: 2388 TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TTCTCCTTC 2446 Query: 2222 TTGCTTTTTTCAGCCTTGACAACTC-CCTTTTTTGCTGCATCAGGCTTTCCTTTAG-CTC 2165 TT CTT TT C CC AC CT CCT TTTT T C T CT T TTT CT Sbjct: 2447 TTTCTTCTT-CTCCCACCACCTCTGGCCTCTTTTTTTTCCTTTT-CTATATTTTTTTCTG 2504 Query: 2164 GATATG 2159 G TATG Sbjct: 2505 GTTATG 2510 Score = 354 (53.1 bits), Expect = 7.4e-06, P = 7.4e-06 Identities = 134/189 (70%), Positives = 134/189 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 2350 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 2409 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTT-TTCTTGCTTTTTTCAGCC 2208 C TC TCTTC TCTTC TC TCTTC TC TCT CCTTCTTT TTCTT CT CA CC Sbjct: 2410 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT-CCTTCTTTCTTCTT-CTCCCACCA-CC 2466 Query: 2207 T-TGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTT-TAGCTC-GATAT-GCAGCAA- 2153 T TG C CTC TTTTTT CT TC TTT TT T G T G T T GC C A Sbjct: 2467 TCTGGC--CTCTTTTTTTTCCTTT-TCTATATTTTTTTCTGGTTATGTTTTTGCCCCCAG 2523 Query: 2152 TATCCTTCCAAAGCA 2138 T TTC AAAGCA Sbjct: 2524 TGGTTTTCAAAAGCA 2538 >D38613 Mouse 921-L mRNA for presynaptic protein, complete cds. Length = 1080 Plus Strand HSPs: Score = 347 (52.1 bits), Expect = 7.6e-06, P = 7.6e-06 Identities = 119/165 (72%), Positives = 119/165 (72%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAA-A-AAGCAAGAAA 2226 AAGGA AAG GA G AG A A A GGAG G AAGG GAA A AAG A GAA Sbjct: 883 AAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGA-GAAG 939 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AGAAGGA AGGAG A GA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAA Sbjct: 940 GAGAAGGAGAAGGAGAAGGA-GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 998 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTA 2335 GAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG T G T TA Sbjct: 999 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATAGCTTTA 1047 Score = 322 (48.3 bits), Expect = 0.00011, P = 0.00011 Identities = 114/156 (73%), Positives = 114/156 (73%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAA-A-AAGCAAGAAA 2226 AAGGA AAG GA G AG A A A GGAG G AAGG GAA A AAG A GAA Sbjct: 853 AAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGA-GAAG 909 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA-GGATGAGGAGGAGGAGGAAGATGA 2285 AGAAGGA AGGAG A GA AGGA GA G AGA GGA AGGAG AGGAG AAGA GA Sbjct: 910 GAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAG-AAGAAGA 967 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 968 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 1008 Score = 320 (48.0 bits), Expect = 0.00014, P = 0.00014 Identities = 112/156 (71%), Positives = 112/156 (71%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAA-A-AAGCAAGAAA 2226 AAGGA AAG GA G AG A A A GGAG G AAGG GAA A AAG A GAA Sbjct: 871 AAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGA-GAAG 927 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AGAAGGA AGGAG A GA AGGA GA G AGA GA GA GA GA GA GAAGA GAA Sbjct: 928 GAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAA 986 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 987 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 1026 Score = 314 (47.1 bits), Expect = 0.00027, P = 0.00027 Identities = 88/118 (74%), Positives = 88/118 (74%), Strand = Plus / Plus Query: 2209 GCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAG 2268 GCT AAAAAG AAG A AG AGGA GAGGAGGA GA GAGGA GA GA GAGGA GAG Sbjct: 697 GCTTGAAAAAGGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG 756 Query: 2269 GAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAGGAGGAGGA GA G AGAAG GAAG GAAG AGAAG GA G GA G A AAG Sbjct: 757 GAGGAGGAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAG 813 Score = 313 (47.0 bits), Expect = 0.00030, P = 0.00030 Identities = 113/156 (72%), Positives = 113/156 (72%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAA-A-AAGCAAGAAA 2226 AAGGA AAG GA G AG A A A GGAG G AAGG GAA A AAG A GAA Sbjct: 847 AAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGA-GAAG 903 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA-GGATGAGGAGGAGGAGGAAGATGA 2285 AGAAGGA AGGAG A GA AGGA GA G AGA GGA AGGAG AGGAG A GA GA Sbjct: 904 GAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GA 961 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 962 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 1002 Score = 313 (47.0 bits), Expect = 0.00030, P = 0.00030 Identities = 113/156 (72%), Positives = 113/156 (72%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAA-A-AAGCAAGAAA 2226 AAGGA AAG GA G AG A A A GGAG G AAGG GAA A AAG A GAA Sbjct: 859 AAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGA-GAAG 915 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA-GGATGAGGAGGAGGAGGAAGATGA 2285 AGAAGGA AGGAG A GA AGGA GA G AGA GGA AGGAG AG AG AAGA GA Sbjct: 916 GAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGAAG-AAGAAGA 973 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 974 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 1014 Score = 313 (47.0 bits), Expect = 0.00030, P = 0.00030 Identities = 113/156 (72%), Positives = 113/156 (72%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAA-A-AAGCAAGAAA 2226 AAGGA AAG GA G AG A A A GGAG G AAGG GAA A AAG A GAA Sbjct: 865 AAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGA-GAAG 921 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA-GGATGAGGAGGAGGAGGAAGATGA 2285 AGAAGGA AGGAG A GA AGGA GA G AGA GGA GA GA GA GA GAAGA GA Sbjct: 922 GAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGA-GAAGAAGAAGAAGAAGAAGA 979 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 980 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 1020 Score = 304 (45.6 bits), Expect = 0.00080, P = 0.00079 Identities = 112/156 (71%), Positives = 112/156 (71%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAA-A-AAGCAAGAAA 2226 AAGGA AAG GA G AG A A A GGAG G AAGG GAA A AAG A GAA Sbjct: 841 AAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGA-GAAG 897 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA-GGATGAGGAGGAGGAGGAAGATGA 2285 AGAAGGA AGGAG A GA AGGA GA G AGA GGA AGGAG AGGAG A GA GA Sbjct: 898 GAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GA 955 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AG AGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 956 AGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 996 Score = 295 (44.3 bits), Expect = 0.0021, P = 0.0021 Identities = 111/156 (71%), Positives = 111/156 (71%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAA-A-AAGCAAGAAA 2226 AAGGA AAG GA G AG A A A GGAG G AAGG GAA A AAG A GAA Sbjct: 835 AAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGA-GAAG 891 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA-GGATGAGGAGGAGGAGGAAGATGA 2285 AGAAGGA AGGAG A GA AGGA GA G AGA GGA AGGAG AGGAG A GA GA Sbjct: 892 GAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GA 949 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AG AGA G AGA GAAGAAGAAGA GA GA GA GAA AAG Sbjct: 950 AGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 990 >AF034569 Mus musculus anticoagulant protein C gene, complete cds. Length = 15,160 Plus Strand HSPs: Score = 354 (53.1 bits), Expect = 7.9e-06, P = 7.9e-06 Identities = 152/222 (68%), Positives = 152/222 (68%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 AAG AAAG GA G AG A AA A G AG G AAG GAA AA G AAGAA AAGA Sbjct: 9803 AAGAAAAGAA-GAAGAAGAAGAAGAAGAAGAAG--AAGAA-GAAGAA-G-AAGAAGAAGA 9856 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 AG AAGA AG AAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGAAG Sbjct: 9857 AG-AAGAAAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 9914 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT-TCTAGCGCAGTTTTTTTT 2349 A GAAGA GAAGAAGAAGA GA GA GA GAA AAG T T TCTA C GT T Sbjct: 9915 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCTCCTCTCTAAT-CTGTCCCCCTA 9973 Query: 2350 TTCTTGTCTATA-AAGC--ATTTAACCCCC-CTGTAC-ACAACTCACT 2392 T TTG ATA AAGC ATTT C C CTG C A AACT ACT Sbjct: 9974 CT-TTGAG-ATAGAAGCTCATTTTGCTCAGGCTGACCTAAAACTTACT 10019 Score = 231 (34.7 bits), Expect = 3.2, P = 0.96 Identities = 65/84 (77%), Positives = 65/84 (77%), Strand = Plus / Plus Query: 2243 AAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAG 2302 AAG T AG AAGA GAAGA GA GA GA GA GA GAAGA GAAGAAGA GAAGA GAAG Sbjct: 9742 AAGTT-AG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 9799 Query: 2303 AAGAAGATGATGATGATGAATAAG 2326 AAGAAGA A GA GA GAA AAG Sbjct: 9800 AAGAAGAAAA-GAAGAAGAAGAAG 9822 >X83976 G.gallus repetitive DNA (ID:Ggamc1) Length = 285 Plus Strand HSPs: Score = 300 (45.0 bits), Expect = 8.3e-06, P = 8.3e-06 Identities = 74/90 (82%), Positives = 74/90 (82%), Strand = Plus / Plus Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 AGGAAGAGGAGGA GA GAGGAAGA GA GAGGA GAGGAGGAGGAGGAAGA GAAGAAG Sbjct: 87 AGGAAGAGGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAG 146 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATG 2320 A GAAGA A GA GA GA GA GA ATG Sbjct: 147 AGGAAGACTACGAGGAGGAGGAAGAC-ATG 175 Score = 272 (40.8 bits), Expect = 0.00016, P = 0.00016 Identities = 98/145 (67%), Positives = 98/145 (67%), Strand = Plus / Plus Query: 2167 GCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAA 2226 GCT AGGAA G C ATG AA AAG A TTG AAG GA GC AG AA Sbjct: 36 GCTCTAGGAAGGGCAAATGGGATGAAGAAGA-ATTTG--AAGAG-GACCTGGGCGAGGAA 91 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AG AGGA GAGGAGGAAGA GAGGA GA GA GAGGA GAGGA GA GA GAAGA GAA Sbjct: 92 GAGGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAGGAA 151 Query: 2287 GAAGATGAAGATGAAGAAGAAGATG 2311 GA A GA GA GA GAAGA ATG Sbjct: 152 GACTACGAGGAGGAGGAAGAC-ATG 175 Score = 263 (39.5 bits), Expect = 0.00040, P = 0.00040 Identities = 83/115 (72%), Positives = 83/115 (72%), Strand = Plus / Plus Query: 2212 GAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAG 2271 G AAA G A GAA AAGAA GA GAGGA TG GG GA GAAGAGGA GAGGAG Sbjct: 48 GCAAATGGGATGAAGAAGAATTT-GAAGAGGACC-TG-GGC-GAGGAAGAGGAGGAGGAG 103 Query: 2272 GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAGGA GAAGA GA GAAGA GA GA GA GAAGAAGA GA GA GA GA TA G Sbjct: 104 GAGGAAGAAGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAGGAAGACTACG 158 Score = 260 (39.0 bits), Expect = 0.00055, P = 0.00055 Identities = 80/112 (71%), Positives = 80/112 (71%), Strand = Plus / Plus Query: 2212 GAAAAAAGCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG 2269 G AAA G A GAA AAGAA GAAGAGGA G GAGGAAGA GA GAGGA GAGG Sbjct: 48 GCAAATGGGATGAAGAAGAATTTGAAGAGGACCTGGGCGAGGAAGAGGAGGAGGAGGAGG 107 Query: 2270 AGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 A GA GAGGA GA GA GA GA GA GA GAAGAAGAAGA GA GA A GA Sbjct: 108 AAGAAGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAGGAAGACTACGA 159 Score = 257 (38.6 bits), Expect = 0.00075, P = 0.00075 Identities = 83/115 (72%), Positives = 83/115 (72%), Strand = Plus / Plus Query: 2212 GAAAAAAGCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG 2269 G AAA G A GAA AAGAA GAAGAGGA G GAGGAAGA GA GAGGA GAGG Sbjct: 48 GCAAATGGGATGAAGAAGAATTTGAAGAGGACCTGGGCGAGGAAGAGGAGGAGGAGGAGG 107 Query: 2270 A-G--GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 A G GAGGAGGAAGA GA GA GA GAAGA GAAGAAGA GA GA A GA GA Sbjct: 108 AAGAAGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAGGAAGACTACGAGGA 162 Score = 236 (35.4 bits), Expect = 0.0068, P = 0.0068 Identities = 72/103 (69%), Positives = 72/103 (69%), Strand = Plus / Plus Query: 2224 AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 ||| | | ||||| || || ||||| | ||||| |||||||||||||| || Sbjct: 50 AAATGGGATGAAGAAGAATTTGAAGAGGACCTGGGCGAGGAAGAGGAGGAGGAGGAGGAA 109 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 ||||| || ||||| || || || || || || || || ||| Sbjct: 110 GAAGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAGGAAG 152 >S79240 Lox4=Ultrabithorax/abdominal-A homolog [Hirudo medicinalis=leeches, Length = 2336 Plus Strand HSPs: Score = 351 (52.7 bits), Expect = 8.3e-06, P = 8.3e-06 Identities = 119/166 (71%), Positives = 119/166 (71%), Strand = Plus / Plus Query: 2173 GGA-AAGCCTGATGCAGCAAAAAAG--GGAGTTGTCAAGGCTGAAAAAAGCAAGAAA--A 2227 GGA AA C G T CAG AA AG GGAG T AA CTG AA G AA A A A Sbjct: 910 GGAGAATTCCGTTTCAGAGAAGGAGATGGAGAATTGAAAACTGCAACTGGAAAAAGAGGA 969 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGA GGAAGA GA GAAGA GA GA GA GAAGAGGATGA GA GA GAGGA GATGAAG Sbjct: 970 AGA-GGAAGATGACGAAGAGGATGACGAAGAAGAGGATGACGAAGAAGAGGATGATGAAG 1028 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGA-TGATGAATAAGTTGGTTCT 2334 AAGA GA GATGAAGAAGAAGA GATGA T GA T AGTT TTCT Sbjct: 1029 AAGAGGAGGATGAAGAAGAAGAGGATGAATCCGGAGTTAGTTC-TTCT 1075 Score = 330 (49.5 bits), Expect = 7.7e-05, P = 7.7e-05 Identities = 100/133 (75%), Positives = 100/133 (75%), Strand = Plus / Plus Query: 2232 GGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGA 2291 GGAA A GAGGAAGA GA GA GA GAAGAGGATGA GA GA GAGGA GA GAAGAAGA Sbjct: 958 GGAAAAAGAGGAAGAGGAAGATGACGAAGAGGATGACGAAGAAGAGGATGACGAAGAAGA 1017 Query: 2292 TGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCAGTTTTTTTTT- 2350 GA GATGAAGAAGA GA GATGA GA GAA A G TG TC G G AGTT TT TT Sbjct: 1018 GGATGATGAAGAAGAGGAGGATGAAGAAGAAGAGGATGAATCC-G-G-AGTTAGTTCTTC 1074 Query: 2351 T-CTTGTCTATAAAG 2364 T CTT T ATAA G Sbjct: 1075 TGCTTATACATAAGG 1089 >M14794 Human prothymosin alpha mRNA, lymphocyte clone pIF536. Length = 333 Plus Strand HSPs: Score = 298 (44.7 bits), Expect = 8.7e-06, P = 8.7e-06 Identities = 130/195 (66%), Positives = 130/195 (66%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAGGA TTG G A A AG AA GGAA AG C G C GC AA GGGA T Sbjct: 128 GAAGGAAGTTGTGGAAGAGGCAGAAAATGGAAGAGAC-GCCCCTGCTAAC--GGGAATGC 184 Query: 2204 TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 T AA G GAAAA G AG A AG GA A GAGG AGA GA GAAGA GAAGA G Sbjct: 185 T-AATGAGGAAAATGGGGAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAG 243 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGA---TGAAGATGAAGAAGAAGATG-A--TGATG 2317 TG GGAGGA GAGGA GA GAAGAAGA TGA G TGA GAAGA GATG A TGA G Sbjct: 244 GTGGGGAGGAAGAGGAGGAGGAAGAAGAAGGTGATGGTGAGGAAGAGGATGGAGATGAAG 303 Query: 2318 ATGAATAAGTTGGTTCTAGC 2337 ATGA AAG TG TC AGC Sbjct: 304 ATGAGGAAGCTGAGTC-AGC 322 >M57718;M33937 Rat cytochrome P-450 IV A1 (CYP4A1) gene, complete cds. Length = 16,299 Minus Strand HSPs: Score = 353 (53.0 bits), Expect = 8.8e-06, P = 8.8e-06 Identities = 127/177 (71%), Positives = 127/177 (71%), Strand = Minus / Plus Query: 2322 TTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATC 2263 T C TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC TC TC Sbjct: 3806 TGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 3865 Query: 2262 CTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTT-TTCTTGCTTTTTTCAGCCTTGA 2204 TCTTC TCTTC TCATC TC TC TCT CCTT TTT TTCTT CTT T T GC TT A Sbjct: 3866 TTCTTCTTCTTCTTCATCGTCTTCATCT-CCTTTTTTCTTCTTCCTTCTCT--GC-TT-A 3920 Query: 2203 CAACTCCCTTTTTTGCTGCATCAGGCT-TTCCTTTAGCTC-GA-TATGCAGCAATATCCT 2147 A TC C T T T CT ATC CT TTC TA CTC G TATGCA CAA A CT Sbjct: 3921 TAG-TCTCCTCTCTCCTCAATCTCTCTCTTCACCTA-CTCAGTGTATGCATCAACAAGCT 3978 Query: 2146 T 2146 T Sbjct: 3979 T 3979 Score = 333 (50.0 bits), Expect = 7.2e-05, P = 7.2e-05 Identities = 157/246 (63%), Positives = 157/246 (63%), Strand = Minus / Plus Query: 2341 CTGCG-CTAGAACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCA 2283 CTGCG CT G C CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC Sbjct: 3799 CTGCGGCT-GCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 3857 Query: 2282 TCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCT-CTTCCTTCTTTTT 2224 TCTTC TC TC TC TC TC TC TC TCTTC TC CTT T CT CTTCCTTCT T Sbjct: 3858 TCTTCTTCTTCTTCTTCTTCTTCATCGTCTTCATCTCCTTTTTTCTTCTTCCTTCTCTG- 3916 Query: 2223 CTTGCTTTTTTCAGC-CTTGACAA-CTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCT 2166 CTT T T TC C CT CAA CTC CT TT CT C TCAG T T C T A C Sbjct: 3917 CTTA-TAGTCTCCTCTCTCCTCAATCTCTCTCTTCACCTAC-TCAGTGTATGCATCAACA 3974 Query: 2165 CGATATGCAGCAATATCCTTCCAAAGCAAAG-GGAGGATAAAACAGTAGGGAAGAAAAAA 2107 G T T CA TAT CT C G A A GG T A A A TAG AA A A AA Sbjct: 3975 AGCTTTACATATGTATTCTACTTT-GAATACAGGTTCTTCACATA-TAGTTAAAATAGAA 4032 Query: 2106 AGATTA-AGGAA 2096 A ATT AGG A Sbjct: 4033 ATATTCCAGGTA 4044 Score = 296 (44.4 bits), Expect = 0.0035, P = 0.0035 Identities = 100/145 (68%), Positives = 100/145 (68%), Strand = Minus / Plus Query: 2339 GCGCTAGAACCAACT-TATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATC 2281 GC CTA A C A T T TTC C TC TC TCTTCTTCTTC TCTTC TCTTCTTC TC Sbjct: 7231 GCTCTACAGTCTAATCTGTTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 7290 Query: 2280 TTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTT 2221 TTC TC TC TC TC TC TCTTC TCTTC TC TCTTC TC TCTTC TT Sbjct: 7291 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGAAATTACAAG 7350 Query: 2220 -GCTTTTTTCAG-CC-TTGACAACT 2199 GCT T T CAG CC TTG AACT Sbjct: 7351 AGCTATATCCAGGCCATTGGGAACT 7375 >X96770 S.cerevisiae chromosome XVI, left arm DNA Length = 55,786 Minus Strand HSPs: Score = 353 (53.0 bits), Expect = 9.0e-06, P = 9.0e-06 Identities = 119/170 (70%), Positives = 119/170 (70%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTT-CATCTTCATCTTCTTCATCTTCCTCCTC 2272 C AA TT TTC T TC T T TTCTT TT C TCTTC TCTTC TCATCTTC TC TC Sbjct: 25382 CAAATTTCTTCCTTCTCCTTCTTTTCTTTTTTCTTCTTCTTCTTCATCATCTTCATCATC 25441 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TT 2213 TC TCATC TCTTCATCTTC TCATC TC T TCTTC TTCTT TTCTT T T TT Sbjct: 25442 TTCTTCATCTTCTTCATCTTCTTCATCATCATTTTCTTC-TTCTTCTTCTTCATCATCTT 25500 Query: 2212 CAGCCTTGACAACTCCCTTTT-TTGCTGCATCAGGCTTTCCTTTAGCTCGAT 2162 CA C T CA CT C T TT TT CT C TC G C TT CT TA C C AT Sbjct: 25501 CATCATCTTCATCTTCTTCTTCTTCCT-CGTCGGCCCTTACTGTAACGCCAT 25551 Score = 345 (51.8 bits), Expect = 2.1e-05, P = 2.1e-05 Identities = 125/176 (71%), Positives = 125/176 (71%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TCATC TCATCATCTTCTTC TC TCTTCATCTTCTTCATC TC T TC TC T Sbjct: 25423 CTTCATCATCTTCATCATCTTCTTCATCTTCTTCATCTTCTTCATCATCATTTTCTTCTT 25482 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCT 2207 C TC TCTTCATC TC TCATC TC TC TCTTC TTCTT TTC T T C CT Sbjct: 25483 CTTCTTCTTCATCATCTTCATCATCTTCATCTTC-TTCTTCTTCCTCGTCGGCCCTTACT 25541 Query: 2206 -TGACAAC-TCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGC-TCGATATGCAGC-AATA 2151 T AC C TC T TTTG G A AG CT CC T AGC TC ATAT CAG AATA Sbjct: 25542 GTAACGCCATCAAATATTTGG-G-AGGAG-CTA-CCATCAGCCTC-ATATTCAGTTAATA 25596 Score = 321 (48.2 bits), Expect = 0.00026, P = 0.00026 Identities = 81/102 (79%), Positives = 81/102 (79%), Strand = Minus / Plus Query: 2331 ACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC 2272 | || ||| |||||| || ||||||||||| ||||| | |||||||| ||||| || || Sbjct: 25436 ATCATCTTCTTCATCTTCTTCATCTTCTTCATCATCATTTTCTTCTTCTTCTTCTTCATC 25495 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTT 2230 || ||||| ||||||||||| || |||||||| || || | Sbjct: 25496 ATCTTCATCATCTTCATCTTCTTCTTCTTCCTCGTCGGCCCT 25537 Score = 316 (47.4 bits), Expect = 0.00044, P = 0.00044 Identities = 80/101 (79%), Positives = 80/101 (79%), Strand = Minus / Plus Query: 2331 ACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC 2272 | || ||| ||||| || ||||||||||| || |||||||| || | ||||| || || Sbjct: 25427 ATCATCTTCATCATCTTCTTCATCTTCTTCATCTTCTTCATCATCATTTTCTTCTTCTTC 25486 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCT 2231 || ||||| |||||||| || |||||||| || ||||||| Sbjct: 25487 TTCTTCATCATCTTCATCATCTTCATCTTCTTCTTCTTCCT 25527 >AB010266 Mus musculus Creb-rp, Tnx and Cyp21 genes for cAMP response Length = 67,977 Plus Strand HSPs: Score = 353 (53.0 bits), Expect = 9.0e-06, P = 9.0e-06 Identities = 121/169 (71%), Positives = 121/169 (71%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCTG-ATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAA-AGCA 2221 GAGCTA AGGA A CCTG AT A AAA A A GGAG G AGG GA A A AG A Sbjct: 15035 GAGCTACAGGAGA-CCTGCATTAAAGAAAGAGAAGGAGAAGG--AGGAAGAGAGAGAGGA 15091 Query: 2222 AGAAAA--AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGA 2279 AGAA A AGAAGGAAGA GAGGA GA G GAAGA GAAGA GA GAG AGG GA GA Sbjct: 15092 AGAAGAGGAGAAGGAAGAAGAGGAGGAGGGAGAAGAGGAAGAAGAGGAGAAGGGAGAAGA 15151 Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 GA GAAGAAGA GA GA GAAGAAGA GA GA GA GA GA AAG GGT Sbjct: 15152 GGAGGAAGAAGAGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAAGGAGGT 15203 Score = 313 (47.0 bits), Expect = 0.00060, P = 0.00060 Identities = 119/175 (68%), Positives = 119/175 (68%), Strand = Plus / Plus Query: 2156 CTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAA 2214 CTGCAT T AG AAAG AAG GA G AG AA A AG GAG A AGG GAA Sbjct: 15049 CTGCAT-TAAAG--AAAGAGAAGGA-GAAGGAGGAAGAGAGAGAGGAAGAAGAGGA-GAA 15103 Query: 2215 AAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AAG AAGA A GA GGA GA GAGGAAGA GAGGA A G AGA GA GAGGA GA Sbjct: 15104 GGAAG-AAGAGGAGGAGGGA-GAAGAGGAAGAAGAGGAGAAGGGAGAAGAGGAGGAAGAA 15161 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 GAGGA GA GAAGAAGA GA GA GAAGA GA GA G G TGA AA AAG TGG Sbjct: 15162 GAGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAAGGAGGTGAA-AAGAAGGTGG 15216 Score = 291 (43.7 bits), Expect = 0.0060, P = 0.0060 Identities = 123/189 (65%), Positives = 123/189 (65%), Strand = Plus / Plus Query: 2138 TGCTTTGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGG 2197 TGC TT AAG A A G G A A GAG A AG A AG GA G AG A AAGG Sbjct: 15050 TGCATTA-AAGAA-AGAGAAGGAGAAGGAGGAAGAG-AGAGAG-GAAGAAGAGGAGAAGG 15105 Query: 2198 GAGTTGTCAAGGCTGAAAAA-AGCAAGAAAA--AGAAGGAAGAGGAGGAAGATGAGGAAG 2254 AG G AGG G A AA AG AAGAA A AGAAGG AGA GAGGA GA GA GA G Sbjct: 15106 AAGAAGAGGAGGAGGGAGAAGAGGAAGAAGAGGAGAAGGGAGAAGAGGAGGAAGAAGAGG 15165 Query: 2255 ATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG 2314 A GA GA GA GAGGAGGAGGA GA GA GAAG AG TGAA A GAAG G AG GA G Sbjct: 15166 AGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAAGGAGGTGAAAA-GAAGGTGGAGGGGAGG 15224 Query: 2315 ATGATGAATAAG 2326 A GA GAA A G Sbjct: 15225 AGGAGGAAGAGG 15236 Score = 280 (42.0 bits), Expect = 0.019, P = 0.019 Identities = 100/140 (71%), Positives = 100/140 (71%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAG--GCTGAAAAA-AGCAAGAAAA 2227 AAG A AG GA G AG A A GGAG TG AAG G TG A AG A GA A Sbjct: 15172 AAGAAGAGGAGGAGGAAGAGGAGGAAGGAGGTGAAAAGAAGGTGGAGGGGAGGAGGAGGA 15231 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGG--AGGAAGATGA 2285 AGA GGAAGAG AGGA GA GA GAAGA GAAGAG ATGAGGAGGAGG AGGAAGA GA Sbjct: 15232 AGA-GGAAGAGAAGGAGGA-GAAGAAGAGGAAGAGAATGAGGAGGAGGGGAGGAAGAGGA 15289 Query: 2286 AGAAGATGAAGATGAAGAAGAAG 2308 AGA GA GAAGA GAAGA GA G Sbjct: 15290 AGAGGA-GAAGAGGAAGAGGAGG 15311 Score = 271 (40.7 bits), Expect = 0.049, P = 0.048 Identities = 99/143 (69%), Positives = 99/143 (69%), Strand = Plus / Plus Query: 2184 TGCAGCAAAA-AAGGGAGTTGTCA-AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAG 2241 T CAGC AA AAGGG T T A G T AA AAGAA AAGA GGA G GG G Sbjct: 67323 TTCAGCCCAACAAGGGCTCTATAGTAAGATCTAATCTTAAAGAAGAAGAGGGA-GTGGTG 67381 Query: 2242 GAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAA 2301 GA GA GAGGAAGAT A GAGGA GAGGA GAGGAGGAAGA GA GAAG GAAG AA Sbjct: 67382 GAGGAGGAGGAAGAT-AGGAGGAAGAGGAAGAGGAGGAAGAGGA-GAAGGAGAAGGAAAA 67439 Query: 2302 GAAGAAGATG-ATGATGATGAATAAG 2326 GAAG AG G A GA GA GA AAG Sbjct: 67440 GAAGGAGGGGGAGGAGGAAGAGGAAG 67465 Score = 255 (38.3 bits), Expect = 0.26, P = 0.23 Identities = 79/107 (73%), Positives = 79/107 (73%), Strand = Plus / Plus Query: 2187 AGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGA 2246 AG A AA AGGGAGT GT AGG GA AA A GA AAGA GGAAGAGGAGGAAGA Sbjct: 67363 AGAAGAAGAGGGAGTGGTGGAGGAGGAGGAAGATAGGAGGAAGA-GGAAGAGGAGGAAGA 67421 Query: 2247 TGAGGA--AGATG-AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGA 2291 GAG A AGA G AA AG A GAGG GGAGGAGGAAGA GAAGA GA Sbjct: 67422 GGAGAAGGAGAAGGAAAAGAAGGAGGGGGAGGAGGAAGAGGAAGAGGA 67469 Score = 221 (33.2 bits), Expect = 9.3, P = 1.0 Identities = 81/108 (75%), Positives = 81/108 (75%), Strand = Plus / Plus Query: 2213 AAAAAAGCAAGAAAAAGAAGGAAG-AGGA-GGAAGATGAGGAAGATGAAGAGGATG-AGG 2269 AA AAAG AA AAAAGAAGGAAG AGGA GG GA GAG AAGATG AG GGA G AGG Sbjct: 19890 AATAAAGGAAAGAAAAGAAGGAAGGAGGAAGGGGGAAGAGAAAGATGGAG-GGAGGGAGG 19948 Query: 2270 AG-GAGGAGGAAGATGAAGAAGATGAAG-ATGAAGAAG-AAGATGATGATGA 2318 A GA GAGG A A GAAGAAG GA G A GAAGAAG AA A G GA GA Sbjct: 19949 AAAGAAGAGGGA-AGGAAGAAGG-GAGGGAGGAAGAAGGAAAAAGG-GAAGA 19997 >AF030001 Mus musculus major histocompatibility locus class III Length = 201,964 Plus Strand HSPs: Score = 353 (53.0 bits), Expect = 9.1e-06, P = 9.1e-06 Identities = 121/169 (71%), Positives = 121/169 (71%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCTG-ATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAA-AGCA 2221 GAGCTA AGGA A CCTG AT A AAA A A GGAG G AGG GA A A AG A Sbjct: 145940 GAGCTACAGGAGA-CCTGCATTAAAGAAAGAGAAGGAGAAGG--AGGAAGAGAGAGAGGA 145996 Query: 2222 AGAAAA--AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGA 2279 AGAA A AGAAGGAAGA GAGGA GA G GAAGA GAAGA GA GAG AGG GA GA Sbjct: 145997 AGAAGAGGAGAAGGAAGAAGAGGAGGAGGGAGAAGAGGAAGAAGAGGAGAAGGGAGAAGA 146056 Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 GA GAAGAAGA GA GA GAAGAAGA GA GA GA GA GA AAG GGT Sbjct: 146057 GGAGGAAGAAGAGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAAGGAGGT 146108 Score = 313 (47.0 bits), Expect = 0.00060, P = 0.00060 Identities = 119/175 (68%), Positives = 119/175 (68%), Strand = Plus / Plus Query: 2156 CTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAA 2214 CTGCAT T AG AAAG AAG GA G AG AA A AG GAG A AGG GAA Sbjct: 145954 CTGCAT-TAAAG--AAAGAGAAGGA-GAAGGAGGAAGAGAGAGAGGAAGAAGAGGA-GAA 146008 Query: 2215 AAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AAG AAGA A GA GGA GA GAGGAAGA GAGGA A G AGA GA GAGGA GA Sbjct: 146009 GGAAG-AAGAGGAGGAGGGA-GAAGAGGAAGAAGAGGAGAAGGGAGAAGAGGAGGAAGAA 146066 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 GAGGA GA GAAGAAGA GA GA GAAGA GA GA G G TGA AA AAG TGG Sbjct: 146067 GAGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAAGGAGGTGAA-AAGAAGGTGG 146121 Score = 291 (43.7 bits), Expect = 0.0061, P = 0.0060 Identities = 123/189 (65%), Positives = 123/189 (65%), Strand = Plus / Plus Query: 2138 TGCTTTGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGG 2197 TGC TT AAG A A G G A A GAG A AG A AG GA G AG A AAGG Sbjct: 145955 TGCATTA-AAGAA-AGAGAAGGAGAAGGAGGAAGAG-AGAGAG-GAAGAAGAGGAGAAGG 146010 Query: 2198 GAGTTGTCAAGGCTGAAAAA-AGCAAGAAAA--AGAAGGAAGAGGAGGAAGATGAGGAAG 2254 AG G AGG G A AA AG AAGAA A AGAAGG AGA GAGGA GA GA GA G Sbjct: 146011 AAGAAGAGGAGGAGGGAGAAGAGGAAGAAGAGGAGAAGGGAGAAGAGGAGGAAGAAGAGG 146070 Query: 2255 ATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG 2314 A GA GA GA GAGGAGGAGGA GA GA GAAG AG TGAA A GAAG G AG GA G Sbjct: 146071 AGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAAGGAGGTGAAAA-GAAGGTGGAGGGGAGG 146129 Query: 2315 ATGATGAATAAG 2326 A GA GAA A G Sbjct: 146130 AGGAGGAAGAGG 146141 Score = 280 (42.0 bits), Expect = 0.019, P = 0.019 Identities = 100/140 (71%), Positives = 100/140 (71%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAG--GCTGAAAAA-AGCAAGAAAA 2227 AAG A AG GA G AG A A GGAG TG AAG G TG A AG A GA A Sbjct: 146077 AAGAAGAGGAGGAGGAAGAGGAGGAAGGAGGTGAAAAGAAGGTGGAGGGGAGGAGGAGGA 146136 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGG--AGGAAGATGA 2285 AGA GGAAGAG AGGA GA GA GAAGA GAAGAG ATGAGGAGGAGG AGGAAGA GA Sbjct: 146137 AGA-GGAAGAGAAGGAGGA-GAAGAAGAGGAAGAGAATGAGGAGGAGGGGAGGAAGAGGA 146194 Query: 2286 AGAAGATGAAGATGAAGAAGAAG 2308 AGA GA GAAGA GAAGA GA G Sbjct: 146195 AGAGGA-GAAGAGGAAGAGGAGG 146216 Score = 255 (38.3 bits), Expect = 0.26, P = 0.23 Identities = 87/125 (69%), Positives = 87/125 (69%), Strand = Plus / Plus Query: 2184 TGCAGCAAAA-AAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGG 2242 T CAGC AA AAGGG T T A G T AA AAGAA AAGA GGA G GG GG Sbjct: 198242 TTCAGCCCAACAAGGGCTGTATATAAGATCTAATCTTAAAGAAGAAGAGGGA-GTGGTGG 198300 Query: 2243 AAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAG 2302 A GA GAGGAAGAT A GAGGA GA GA GAGGAGGAAGA GA GAAG GAAG AAG Sbjct: 198301 AGGAGGAGGAAGAT-AGGAGGAAGAAGAAGAGGAGGAAGAGGA-GAAGGAGAAGGAAAAG 198358 Query: 2303 AAGAAG 2308 AAG AG Sbjct: 198359 AAGGAG 198364 Score = 221 (33.2 bits), Expect = 9.3, P = 1.0 Identities = 81/108 (75%), Positives = 81/108 (75%), Strand = Plus / Plus Query: 2213 AAAAAAGCAAGAAAAAGAAGGAAG-AGGA-GGAAGATGAGGAAGATGAAGAGGATG-AGG 2269 AA AAAG AA AAAAGAAGGAAG AGGA GG GA GAG AAGATG AG GGA G AGG Sbjct: 150795 AATAAAGGAAAGAAAAGAAGGAAGGAGGAAGGGGGAAGAGAAAGATGGAG-GGAGGGAGG 150853 Query: 2270 AG-GAGGAGGAAGATGAAGAAGATGAAG-ATGAAGAAG-AAGATGATGATGA 2318 A GA GAGG A A GAAGAAG GA G A GAAGAAG AA A G GA GA Sbjct: 150854 AAAGAAGAGGGA-AGGAAGAAGG-GAGGGAGGAAGAAGGAAAAAGG-GAAGA 150902 Score = 138 (20.7 bits), Expect = 0.00033, Sum P(2) = 0.00033 Identities = 50/67 (74%), Positives = 50/67 (74%), Strand = Plus / Plus Query: 2076 TTCTGCCATGTTCTATTT-CTTTCCTTAAT-CTTTTTTTCTTCCCTACTGTTTTATCCTC 2133 TTCT C T TTCT TTT CTTTCCTT T CTTT TTTCTT C T CT T TT TC T Sbjct: 138314 TTCTTTC-T-TTCTTTTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-TCTTT 138370 Query: 2134 CCTTTGCTT 2142 CCTTT CTT Sbjct: 138371 CCTTT-CTT 138378 Minus Strand HSPs: Score = 337 (50.6 bits), Expect = 4.9e-05, P = 4.9e-05 Identities = 165/256 (64%), Positives = 165/256 (64%), Strand = Minus / Plus Query: 2478 GTGTGTTAACTATACAAAAAAAGACACTGTACA-GTTTAAAAACAAATCTTACACAGCC- 2421 GTGT T TAT CA AA G CAC T CA GT TA AACAAA C ACA AG Sbjct: 199638 GTGTACTGCATATGCACAACGTG-CACATT-CATGTGTACTAACAAAAC--ACAGAGGGG 199693 Query: 2420 TTACATTTCAATTTTTTTCTTTAAAAGGAGTGAGTTGTGTACAGGGGGGTTAAATGCTTT 2361 TT C TTT T TTT C TTA A A T A T T TA G G T ATG T Sbjct: 199694 TTTC-TTTGGTTGTTTAGCGTTACATTTACTTATATTT-TAT--GTTGTATGTATGTGTA 199749 Query: 2360 ATAGACAAGAAAAAAAAAACTGCGCTAGAACCA-A--CTTA-TT-CATCATCATCATCTT 2306 A AG AA AAAA A T C C A AACCA A C A TT C TC TC T TCTT Sbjct: 199750 AAAGTAAACAAAATCTATGTTCCCCCACAACCACAACCAGACTTTCTTCTTCTTTTTCTT 199809 Query: 2305 CTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCAT 2246 CTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC TC TC TCTTC TCTTC TC T Sbjct: 199810 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 199869 Query: 2245 CTTCCTCCTCTTCCTTCTTTTTC 2223 CTTC TC TCTTC TTCTT TTC Sbjct: 199870 CTTCTTCTTCTTC-TTCTTCTTC 199891 Score = 296 (44.4 bits), Expect = 0.0036, P = 0.0036 Identities = 76/97 (78%), Positives = 76/97 (78%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 ||| || || || || ||||||||||| ||||| |||||||| ||||| || || || | Sbjct: 199798 CTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 199857 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTT 2230 | || ||||| ||||| || ||||| || |||||| | Sbjct: 199858 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAT 199894 >AF005370 Alcelaphine herpesvirus 1 L-DNA, complete sequence. Length = 130,608 Minus Strand HSPs: Score = 352 (52.8 bits), Expect = 1.0e-05, P = 1.0e-05 Identities = 122/178 (68%), Positives = 122/178 (68%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TCATCATC TC TCTTCTTC TC TCATC TC TC TCTTCCTC TC TCCT Sbjct: 117707 CTTCTTCCTCATCATCCTCCTCTTCTTCCTCATCATCCTCCTCTTCTTCCTCATCATCCT 117766 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCT 2207 C TC TCTTC TC TCCTC TCTTCCTCCTCTTC T CT TT CT G T T A CT Sbjct: 117767 CCTCTTCTTCCTCCTCCTCTTCTTCCTCCTCTTCTTCCTCTTCCTCG-TCGTCAGAATCT 117825 Query: 2206 TGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGA-TATGCAGCAATATC 2149 T AC C T T GC CAT A GC TTC T GC CG TAT GCA T TC Sbjct: 117826 TTACTTGACGAGTGTGAGCCACAT-ACGCCTTCTAGT-GCACGCCTATTG-GCACTGTC 117881 Score = 343 (51.5 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 117/164 (71%), Positives = 117/164 (71%), Strand = Minus / Plus Query: 2328 AACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTC 2269 AA TTAT AT AT A C TCTTC TC TC TCTTC TC TC TC TC TC TC TCCTC Sbjct: 117617 AAGTTATA-ATAATAA-CTTCTTCCTCCTCTTCTTCCTCATCATCCTCCTCTTCTTCCTC 117674 Query: 2268 CTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAG 2210 TCATCCTC TC TCTTCCTCATC TCCTCCTCTTC TTC T TC T CT T TTC Sbjct: 117675 ATCATCCTCCTCTTCTTCCTCATCATCCTCCTCTTC-TTCCTCATCATCCTCCTCTTCTT 117733 Query: 2209 CCTTGACAACTCCCTTTT-TTGCTGCATCAGGCTTTCCTT-TAGCTC 2165 CCT CA C CCT TT TT CT CATCA CT CTT T CTC Sbjct: 117734 CCTCATCATCCTCCTCTTCTTCCT-CATCATCCTCCTCTTCTTCCTC 117779 Score = 340 (51.0 bits), Expect = 3.5e-05, P = 3.5e-05 Identities = 104/145 (71%), Positives = 104/145 (71%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 C T TTC TC TCATCATC TC TCTTC TC TCATC TC TC TCTTC TCCTC TC T Sbjct: 117662 CCTCTTCTTCCTCATCATCCTCCTCTTCTTCCTCATCATCCTCCTCTTCTTCCTCATCAT 117721 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCC 2208 C TCCTCTTC TC TC TCATC TCCTC TCTTCCT C T TC T CT TT TTC CC Sbjct: 117722 CCTCCTCTTCTTCCTCATCATCCTCCTCTTCTTCCT-CATCATCCTCCTCTTCTTCCTCC 117780 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATC 2182 T C CT CCT T T CT C TC Sbjct: 117781 TCCTCTTCTTCCTCCTCTTCTTCCTC 117806 Score = 337 (50.6 bits), Expect = 4.9e-05, P = 4.9e-05 Identities = 113/155 (72%), Positives = 113/155 (72%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 C T TTC TC TCATCATC TC TCTTC TC TCATC TC TC TCTTC T TCCTC T Sbjct: 117641 CCTCTTCTTCCTCATCATCCTCCTCTTCTTCCTCATCATCCTCCTCTTC-T--TCCTCAT 117697 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCC 2208 CATCCTC TC TCTTCCTCATC TCCTCCTCTTC TTC T TC T CT T TTC CC Sbjct: 117698 CATCCTCCTCTTCTTCCTCATCATCCTCCTCTTC-TTCCTCATCATCCTCCTCTTCTTCC 117756 Query: 2207 TTGACAACTCCCTTTT-TTGCTGCATCAGGCT-TTCCT 2172 T CA C CCT TT TT CT C TC T TTCCT Sbjct: 117757 TCATCATCCTCCTCTTCTTCCTCC-TCCTCTTCTTCCT 117793 >U05314 Saccharomyces cerevisiae nuclear polyadenylated RNA-binding protein Length = 2499 Plus Strand HSPs: Score = 349 (52.4 bits), Expect = 1.1e-05, P = 1.1e-05 Identities = 113/161 (70%), Positives = 113/161 (70%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTG-ATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAA 2227 A AGGAAA C G A G A AAA A G AG G A G GAA AA A CAA AAAA Sbjct: 272 AGAGGAAAACGGGGAAGTAATAAACACAGAAGAAGAAGAAGAAGAAGAACATCAACAAAA 331 Query: 2228 AGAAGGAA--GAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AG GGAA GA GA GA GATGA GA ATGAAGAGGA GA GAGGA GA GA GATGA Sbjct: 332 AGGCGGAAATGATGATGACGATGATGATAATGAAGAGGAAGAAGAGGAAGAAGAGGATGA 391 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GATGA GATGA GA GA GATGATGATGA GAA AAG Sbjct: 392 TGACGATGATGATGATGACGACGATGATGATGAAGAAGAAG 432 Score = 312 (46.8 bits), Expect = 0.00053, P = 0.00053 Identities = 120/174 (68%), Positives = 120/174 (68%), Strand = Plus / Plus Query: 2144 GGAAGGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAG-GGAGT 2201 GGAAG A AT CA A AG AAG A AAG AT CA CAAAAA G GGA Sbjct: 284 GGAAGTA-ATAAACACAGAAGAAGAAGAAGAAGAAGAAC-AT-CAACAAAAAGGCGGAAA 340 Query: 2202 TG-TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG 2260 TG T A G C GA A G A A AAGA GGAAGA GAGGAAGA GAGGA GATGA G Sbjct: 341 TGATGATGAC-GATGAT-GATA-ATGAAGA-GGAAGAAGAGGAAGAAGAGGATGATGACG 396 Query: 2261 AGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 A GATGA GA GA GA GA GATGA GAAGA GAAGA GAAGAAGAAGA GA GA G Sbjct: 397 ATGATGATGATGACGACGATGATGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 453 Score = 309 (46.4 bits), Expect = 0.00072, P = 0.00072 Identities = 101/138 (73%), Positives = 101/138 (73%), Strand = Plus / Plus Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGG-AA-GAGGAGGAAGATGAGGAAGATGAAGAGG 2263 AAGGC GAAA A A GA A GA G AA GA GAGGAAGA GAGGAAGA A GAGG Sbjct: 331 AAGGCGGAAATGATGATGACGATGATGATAATGAAGAGGAAGAAGAGGAAGA--A-GAGG 387 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 ATGA GA GA GA GA GATGA GA GATGA GATGAAGAAGAAGA GA GA GA GAA Sbjct: 388 ATGATGACGATGATGATGATGACGACGATGATGATGAAGAAGAAGAAGAAGAAGAAGAAG 447 Query: 2324 AAGTTGGTT-CTAGCGCAGTT 2343 AAG GG C A CAGTT Sbjct: 448 AAGAAGGCAACGACAACAGTT 468 Score = 300 (45.0 bits), Expect = 0.0019, P = 0.0019 Identities = 120/170 (70%), Positives = 120/170 (70%), Strand = Plus / Plus Query: 2166 AGCTAA--AGGAAAGCCTGATGCAGCAAAAAAGGGA-GTTGTCAAGGCTGAA-AA-AAGC 2220 AG TAA AGGAAA GA G AG AAAA GGGA GT T AA C GAA AA AAG Sbjct: 254 AGATAAGGAGGAAAAAG-GA-G-AGGAAAACGGGGAAGTAATAAACACAGAAGAAGAAGA 310 Query: 2221 A-A-GAA-AA-AG-AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGG 2275 A A GAA AA A AA AA AGG GGAA ATGA GA GA GA GA GAT A GA GAGG Sbjct: 311 AGAAGAAGAACATCAACAAAAAGGCGGAA-ATGATGATGACGATGATGATAATGAAGAGG 369 Query: 2276 AGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 A GAAGA GAAGAAGA GA GATGA GA GA GATGATGA GA GA A G TG Sbjct: 370 AAGAAGAGGAAGAAGAGGATGATGACGATGATGATGATGACGACGATGATGATG 423 Score = 233 (35.0 bits), Expect = 2.2, P = 0.89 Identities = 109/161 (67%), Positives = 109/161 (67%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGC-AGCAA-AAAAGGGAGTTGTCAAGGCTGAAAA--AAGCAAGAA 2225 AAAG AAGCC A G AG A AAAA G AG CAA C GAA AAG A G Sbjct: 181 AAAGAGAAGCCGAAAGGGAGGAGGAAAATGAAGAA--CAACAC-GAACTGGAAG-ATGTG 236 Query: 2226 AAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AA GA G AAGAGGAGGAAGAT AGGA GA AA AGGA GAGGA A G GGAAG T A Sbjct: 237 AACGATG-AAGAGGAGGAAGATAAGGAGGAA-AA-AGGA-GAGGAAAACGGGGAAG-TAA 291 Query: 2286 AGAAGAT-GAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 AA A GAAGA GAAGAAGAAGA GA AT A AA AAG GG Sbjct: 292 TAAACACAGAAGAAGAAGAAGAAGAAGAACATCAACAAAAAGGCGG 337 >D37935 Yeast DNA for RNA binding protein, complete cds. Length = 2643 Plus Strand HSPs: Score = 349 (52.4 bits), Expect = 1.1e-05, P = 1.1e-05 Identities = 113/161 (70%), Positives = 113/161 (70%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTG-ATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAA 2227 A AGGAAA C G A G A AAA A G AG G A G GAA AA A CAA AAAA Sbjct: 399 AGAGGAAAACGGGGAAGTAATAAACACAGAAGAAGAAGAAGAAGAAGAACATCAACAAAA 458 Query: 2228 AGAAGGAA--GAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AG GGAA GA GA GA GATGA GA ATGAAGAGGA GA GAGGA GA GA GATGA Sbjct: 459 AGGCGGAAATGATGATGACGATGATGATAATGAAGAGGAAGAAGAGGAAGAAGAGGATGA 518 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GATGA GATGA GA GA GATGATGATGA GAA AAG Sbjct: 519 TGACGATGATGATGATGACGACGATGATGATGAAGAAGAAG 559 Score = 312 (46.8 bits), Expect = 0.00053, P = 0.00053 Identities = 120/174 (68%), Positives = 120/174 (68%), Strand = Plus / Plus Query: 2144 GGAAGGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAG-GGAGT 2201 GGAAG A AT CA A AG AAG A AAG AT CA CAAAAA G GGA Sbjct: 411 GGAAGTA-ATAAACACAGAAGAAGAAGAAGAAGAAGAAC-AT-CAACAAAAAGGCGGAAA 467 Query: 2202 TG-TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG 2260 TG T A G C GA A G A A AAGA GGAAGA GAGGAAGA GAGGA GATGA G Sbjct: 468 TGATGATGAC-GATGAT-GATA-ATGAAGA-GGAAGAAGAGGAAGAAGAGGATGATGACG 523 Query: 2261 AGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 A GATGA GA GA GA GA GATGA GAAGA GAAGA GAAGAAGAAGA GA GA G Sbjct: 524 ATGATGATGATGACGACGATGATGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 580 Score = 309 (46.4 bits), Expect = 0.00073, P = 0.00073 Identities = 101/138 (73%), Positives = 101/138 (73%), Strand = Plus / Plus Query: 2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGG-AA-GAGGAGGAAGATGAGGAAGATGAAGAGG 2263 AAGGC GAAA A A GA A GA G AA GA GAGGAAGA GAGGAAGA A GAGG Sbjct: 458 AAGGCGGAAATGATGATGACGATGATGATAATGAAGAGGAAGAAGAGGAAGA--A-GAGG 514 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 ATGA GA GA GA GA GATGA GA GATGA GATGAAGAAGAAGA GA GA GA GAA Sbjct: 515 ATGATGACGATGATGATGATGACGACGATGATGATGAAGAAGAAGAAGAAGAAGAAGAAG 574 Query: 2324 AAGTTGGTT-CTAGCGCAGTT 2343 AAG GG C A CAGTT Sbjct: 575 AAGAAGGCAACGACAACAGTT 595 Score = 300 (45.0 bits), Expect = 0.0019, P = 0.0019 Identities = 120/170 (70%), Positives = 120/170 (70%), Strand = Plus / Plus Query: 2166 AGCTAA--AGGAAAGCCTGATGCAGCAAAAAAGGGA-GTTGTCAAGGCTGAA-AA-AAGC 2220 AG TAA AGGAAA GA G AG AAAA GGGA GT T AA C GAA AA AAG Sbjct: 381 AGATAAGGAGGAAAAAG-GA-G-AGGAAAACGGGGAAGTAATAAACACAGAAGAAGAAGA 437 Query: 2221 A-A-GAA-AA-AG-AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGG 2275 A A GAA AA A AA AA AGG GGAA ATGA GA GA GA GA GAT A GA GAGG Sbjct: 438 AGAAGAAGAACATCAACAAAAAGGCGGAA-ATGATGATGACGATGATGATAATGAAGAGG 496 Query: 2276 AGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 A GAAGA GAAGAAGA GA GATGA GA GA GATGATGA GA GA A G TG Sbjct: 497 AAGAAGAGGAAGAAGAGGATGATGACGATGATGATGATGACGACGATGATGATG 550 Score = 233 (35.0 bits), Expect = 2.2, P = 0.89 Identities = 109/161 (67%), Positives = 109/161 (67%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGC-AGCAA-AAAAGGGAGTTGTCAAGGCTGAAAA--AAGCAAGAA 2225 AAAG AAGCC A G AG A AAAA G AG CAA C GAA AAG A G Sbjct: 308 AAAGAGAAGCCGAAAGGGAGGAGGAAAATGAAGAA--CAACAC-GAACTGGAAG-ATGTG 363 Query: 2226 AAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AA GA G AAGAGGAGGAAGAT AGGA GA AA AGGA GAGGA A G GGAAG T A Sbjct: 364 AACGATG-AAGAGGAGGAAGATAAGGAGGAA-AA-AGGA-GAGGAAAACGGGGAAG-TAA 418 Query: 2286 AGAAGAT-GAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 AA A GAAGA GAAGAAGAAGA GA AT A AA AAG GG Sbjct: 419 TAAACACAGAAGAAGAAGAAGAAGAAGAACATCAACAAAAAGGCGG 464 >Z95620 S.pombe chromosome II cosmid c3D6. Length = 32,329 Plus Strand HSPs: Score = 351 (52.7 bits), Expect = 1.1e-05, P = 1.1e-05 Identities = 137/195 (70%), Positives = 137/195 (70%), Strand = Plus / Plus Query: 2143 TGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCT-GATGCAGCAAAAAAGGGAGT 2201 TGGAAG A TT TG TA CG G A AGGAA CT GA G G A A GG AG Sbjct: 31883 TGGAAG-ACGTTATTGG-TA-CG-GA-AGAGGAAGAACTAGAAGACGAAGAGCTGGAAGA 31937 Query: 2202 TGTCAAGGCTGAAAAAAGC-AAGAAAAAGAAGGAAGAGGA-G-G-AAGATGAGGAAGATG 2257 G C A G GA AA C AAGA AAGA GGAAGAGGA G G AAGATGAGGAAGA G Sbjct: 31938 AGACGAAGAAGACGAAGACGAAGAGGAAGA-GGAAGAGGAAGAGGAAGATGAGGAAGAAG 31996 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 AAGA GA GA GA GA GA GAAGA GAAGA GA GAAGA GAAGAAGAAGA GA GA G Sbjct: 31997 AAGAAGAAGAAGACGAAGAAGAAGAGGAAGACGACGAAGACGAAGAAGAAGAAGAAGAAG 32056 Query: 2318 ATGAATAAGTTG--GTTCTAG 2336 A G A A GTTG GTT TAG Sbjct: 32057 AAGGAGATGTTGTTGTTGTAG 32077 Score = 294 (44.1 bits), Expect = 0.0044, P = 0.0044 Identities = 134/200 (67%), Positives = 134/200 (67%), Strand = Plus / Plus Query: 2143 TGGAAGGATATTGCTGCATATCGA-G-CTAA-AGGAA-AGCCTGATGCAGCAAAAAAGGG 2198 TGGAAG A A G G A A CGA G C AA AGGAA AG GA G AG AA A G Sbjct: 31931 TGGAAGAAGAC-GAAGAAGA-CGAAGACGAAGAGGAAGAGGAAGAGGAAGAGGAAGATGA 31988 Query: 2199 AGTTGTCAAGGCTGAAAAAAGC-AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATG 2257 G G A G GAA AA C AAGAA AAGA GGAAGA GA GAAGA GA GAAGA G Sbjct: 31989 GGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGA-GGAAGACGACGAAGACGAAGAAGAAG 32047 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 AAGA GA GA AGGAG A G G TG G AG TGAAGATGA G AGATGATGATG Sbjct: 32048 AAGAAGAAGA--AGGAG-ATGTTGTTGTTGTAGTTGAAGATGAGCTTGGAGATGATGATG 32104 Query: 2318 ATGAATAAGTTGGTTCTAG-CG-CAGT 2342 A GA AAG GGT TAG CG CA T Sbjct: 32105 AAGACGAAGA-GGTCGTAGACGACACT 32130 >L40039 Gallus gallus GAA microsatellite region. Length = 373 Plus Strand HSPs: Score = 294 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 106/153 (69%), Positives = 106/153 (69%), Strand = Plus / Plus Query: 2200 GTTGTCA-AGGCTGAAAAAAGCA-AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATG 2257 GTT TCA A C A AAA CA A A A A AA AA A A AAGA GAG AAGA G Sbjct: 161 GTTTTCACACACACACAAACACACACACACAAAAAAAAAAAAAA-AAGA-GAG-AAGAAG 217 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 AAGA GA GA GA GA GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA G Sbjct: 218 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGG 277 Query: 2318 ATGAATAAGTTGGTTCTAGCGC-AGTTTTTTTTTTC 2352 A GAAT A TT TT AG C AG TT TTTT C Sbjct: 278 AGGAATCATTTTCTTGAAGAACTAGCCTTATTTTAC 313 >Z73546;U00094 S.cerevisiae chromosome XVI reading frame ORF YPL190c Length = 4474 Minus Strand HSPs: Score = 349 (52.4 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 113/161 (70%), Positives = 113/161 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TCATCATCATC TC TC TCATC TCATC TC TCATC TC TC TCCTC T Sbjct: 2656 CTTCTTCTTCATCATCATCGTCGTCATCATCATCATCGTCATCATCCTCTTCTTCCTCTT 2715 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTC-TT-CCTTCTTTTTCTTGCTTTT-TTCAG 2210 C TCCTCTTCAT TC TCATC TC TC TC TT CC CTTTTT TTG T TT TTC Sbjct: 2716 CTTCCTCTTCATTATCATCATCGTCATCATCATTTCCGCCTTTTTGTTGATGTTCTTCTT 2775 Query: 2209 CCTTGACAACTCCCTTTTTTGCTGCATCAG-GCTTTCCTTT 2170 C T C CT C T TTT T C TC G TTTCCT T Sbjct: 2776 CTTCTTCTTCTTCTGTGTTTATTACTTCCCCGTTTTCCTCT 2816 Score = 320 (48.0 bits), Expect = 0.00025, P = 0.00025 Identities = 134/200 (67%), Positives = 134/200 (67%), Strand = Minus / Plus Query: 2343 AACTGCGCTAGAACCAACTTAT-TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTT 2285 A CTG GC A C AACT T TC T C TC TCTTCTTCTTC TCTTC TCTTCTT Sbjct: 2606 ATCTGAGCCT-ACCGAACTGTTGTCGTTGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 2664 Query: 2284 CATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTT 2225 CATC TC TC TC TC TCATC TC TC TC TC TC TCTTC TCCTCTTC TTC T T Sbjct: 2665 CATCATCATCGTCGTCATCATCATCATCGTCATCATCCTCTTCTTCCTCTTC-TTCCTCT 2723 Query: 2224 TCTTGCTTTTT-TCAGCCTTGA-CAACTCC-CTTTTTTGCTGCATCAGGCTT-TCCTTTA 2169 TC T T T TC G C T A CA TCC C TTTTTG TG AT CTT T CTT Sbjct: 2724 TCATTATCATCATC-GTCATCATCATTTCCGCCTTTTTGTTG-ATGTT-CTTCTTCTTCT 2780 Query: 2168 GCTCGATATGCAGCAATATCCTTCC 2144 CT T TG AT T CTTCC Sbjct: 2781 TCTTCTTCTGTGTTTAT-TACTTCC 2804 Score = 300 (45.0 bits), Expect = 0.0021, P = 0.0021 Identities = 120/170 (70%), Positives = 120/170 (70%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA C T TC TC TCATCATC TC TC TCATC TC TCTTCTTC TCTTC TCCTC T Sbjct: 2665 CATCATCATCGTCGTCATCATCATCATCGTCATCATCCTCTTCTTCCTCTTCTTCCTCTT 2724 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTC-T-TT-TTCTTG--CTT-T 2216 C T ATC TC TC TC TC TCAT TTCC CCT TT TT T TT TTCTT CTT T Sbjct: 2725 CATTATCATCATCGTCATCATCAT-TTCCGCCTTTTTGTTGATGTTCTTCTTCTTCTTCT 2783 Query: 2215 T-TTCAGCCTTGACAACT-CCCTTTTTTGCTGCATCAGGCTTTCCT--TTAGCT 2166 T TTC G TT A ACT CCC TTTT CT C TC TTTCCT TTA CT Sbjct: 2784 TCTTCTGTGTTTATTACTTCCCCGTTTTCCT-C-TCCTT-TTTCCTCCTTATCT 2834 Score = 233 (35.0 bits), Expect = 2.4, P = 0.91 Identities = 109/161 (67%), Positives = 109/161 (67%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCA-TCTTCTTCATCTTCCTCCTC 2272 CC CTT TT T AT TC TCTTCTTCTTC TCTTC T TT T A CTTCC C T Sbjct: 2751 CCGCCTTTTTGTTGATGTTCTTCTTCTTCTTCTTCTTCTGTGTTTATTA-CTTCCCCGTT 2809 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT--T 2214 TCCTC TCCT TT TC TCCT ATCTTCCTCCTCTTC T C TT C T CTT T Sbjct: 2810 TTCCTC-TCCTTTT--TCCTCCTTATCTTCCTCCTCTTCAT-CGTTCACAT-CTTCCAGT 2864 Query: 2213 TCAGCCTTGACAACTCCCTTTTT-TGCTGCATCA-GGCTTTCCTTT 2170 TC G TTG CT C TTTT T CT C T GGCTT CTTT Sbjct: 2865 TC-GTGTTGTT--CTTCATTTTCCTCCTCCCTTTCGGCTTCTCTTT 2907 >M60665 Rat prothymosin-alpha mRNA, 5' end. Length = 446 Plus Strand HSPs: Score = 291 (43.7 bits), Expect = 1.4e-05, P = 1.4e-05 Identities = 127/192 (66%), Positives = 127/192 (66%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCG-AGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGA-GT 2201 GAA GA TTG TG A G AG AA GGAA AG C A C GC AA GG A G Sbjct: 245 GAAAGAAGTTG-TGGAGGAGGCAGAGAATGGAAGAGACGCAC-CTGCCAATG-GGAACGC 301 Query: 2202 TGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA 2261 T AA G GAAAA G AG A AG GA A GAGG AGATGA GAAGA GAAGA Sbjct: 302 TCAAAATGAGGAAAATGGGGAGCAGGAGGCTGACAATGAGGTAGATGAAGAAGAGGAAGA 361 Query: 2262 GGATGAGGAGGAGGAGGA--AG-ATGAAGAAGATGAAGATGAAGAAGAAGATG-A--TGA 2315 G TG GGAGGA GAGGA AG A GAAGAAG TGA G TGA GAAGAAGATG A TGA Sbjct: 362 AGGTGGGGAGGAAGAGGAGGAGGAGGAAGAAGGTGATGGTGAGGAAGAAGATGGAGATGA 421 Query: 2316 TGATGAATAAGTTGG 2330 GATGA AAG TGG Sbjct: 422 AGATGAGGAAGCTGG 436 >AB006702 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MPO12. Length = 86,263 Minus Strand HSPs: Score = 342 (51.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05 Identities = 90/114 (78%), Positives = 90/114 (78%), Strand = Minus / Plus Query: 2324 TATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCA 2265 TAT CAT TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC TC Sbjct: 25909 TATCCATGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCG 25968 Query: 2264 TCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCA 2211 C TCTTC TCTTCCTC TCTTC TC TCTTC TTCTT TTCTT CTT TT CA Sbjct: 25969 CCATCTTCTTCTTCCTCTTCTTCTTCTTCTTC-TTCTTCTTCTT-CTTCTTCCA 26020 Score = 341 (51.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05 Identities = 97/126 (76%), Positives = 97/126 (76%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTCATCTTC C TC TC T Sbjct: 25919 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCGCCATCTTCTT 25978 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCT 2207 C TCCTCTTC TCTTC TC TCTTC TC TCTTC TTCTT C T CTT TTCA T Sbjct: 25979 CTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TTCTTCCACAT-CTTCCTTCAAT-T 26035 Query: 2206 TGA-CAA 2201 TGA CAA Sbjct: 26036 TGAGCAA 26042 Score = 331 (49.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05 Identities = 99/133 (74%), Positives = 99/133 (74%), Strand = Minus / Plus Query: 2326 CTTATTCATCATC-ATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCC 2268 C TA CA ATC AT TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC Sbjct: 25900 CCTACACAGTATCCATGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 25959 Query: 2267 TCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCC 2208 TCATC TC CATCTTC TC TC TC TC TCTTC TTCTT TTCTT CTT TT C C Sbjct: 25960 TCATCTTCGCCATCTTCTTCTTCCTCTTCTTCTTC-TTCTTCTTCTT-CTTCTT-CTTCT 26016 Query: 2207 TTGACAACTCCCTT 2194 T ACA CT CCTT Sbjct: 26017 TCCACATCTTCCTT 26030 Score = 173 (26.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05 Identities = 283/476 (59%), Positives = 283/476 (59%), Strand = Minus / Plus Query: 970 ACTAAAAAAAAAATTAATTTTAGGATTTTAAGT-TAACAGATCACAAAAACAAA--TACT 914 A TAA AAAAAAATTAATTT A T T AA T TAA T AC AAAACAAA TA T Sbjct: 27392 AATAATAAAAAAATTAATTT-ACT-TATAAAATCTAATTTGTTACTAAAACAAAATTATT 27449 Query: 913 -ATCAGGTGTACACTGCATTGCTATTTAAAGCTGCCTGTG-A-ATTTCTGTGATGCAT-T 858 ATC GGT T A T TT TA AAAG T TGT A ATTT T TGAT A T Sbjct: 27450 TATC-GGTTTG-AGTT--TTATTAAAAAAAGATAAATGTTTAGATTT-TATGATTAAACT 27504 Query: 857 GGACAGGGTGCAAATACTATAATATACTAAATATCCTTCACAACCAAAGCTTAATTTACA 798 GA GT CA A T AAT T C A TA TTCA A CAA CTT T CA Sbjct: 27505 AGATTTAGT-CATTGAATC-AATCTTCACACTAA--TTCATATTCAAT-CTTTTTGGTCA 27559 Query: 797 ACT-AT-TTAATTTATACTAGCTAGAACCCT-AGATGAACATTCTACAATTACACTATTT 741 ACT AT TTA ATA AG A A C CT A AT ACAT CT T AC C TTT Sbjct: 27560 ACTTATGTTACACCATATAAGAAA-ATCGCTTAAAT--ACAT-CTTT--TGACCCAGTTT 27613 Query: 740 CAAAGGGATAGTATTTTTCAA-GAAA-TAAA-AAGATCA-AAAGGAGATACACTGGGCAA 685 AA G TA T TTTTTC GA A TA A AA AT AAA G TA T CA Sbjct: 27614 AAATGTTTTAATTTTTTTCGTTGAGACTATATAACATGTGAAATCTGTTAGGATAA-CAT 27672 Query: 684 AGGAGAC--C-AAATGTCTAATTCAAATGCTCTGGGAACACTCC-CACCCAACAGGAATT 629 GA AC C AAA GT AATT TG T TG AA T C C CAACA G T Sbjct: 27673 TTGATACATCTAAACGT--AATTTTCTTGTTGTGTTAATTTTACACGAACAACACGT-TC 27729 Query: 628 TTAT-AC-T-ATT-TAAATA-TAACCAATATGAACAAGTATTAGCTAAGAAACTTTGAT- 575 T AT AC T ATT TA TA TA C A GAAC A TAT A T A A T T AT Sbjct: 27730 TCATGACATGATTATATGTAGTATCGACGGCGAACCAATATGAA-TCA-ACTGTATAATC 27787 Query: 574 TGTACATTTACACTCTAAACTGACAAAGTAGCT-TGCTAAATTTCTCTCAGATT--CTAC 518 TGTA T A ACT TAA T AC AAGTA TG TA AT TC A ATT C AC Sbjct: 27788 TGTAT-TAGA-ACTGTAA--T-ACCAAGTAATAGTGATATATGAATCATATATTTCCCAC 27842 Query: 517 TG-TAAAACGT-GTCTGGGAAGTAA 495 T T AA C T GT TG AAG AA Sbjct: 27843 TACTTAATCATAGTTTGA-AAGAAA 27866 Score = 172 (25.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05 Identities = 176/298 (59%), Positives = 176/298 (59%), Strand = Minus / Plus Query: 1002 CGATACTCAGAGCAGAAGAGGAAGAAGGCCGAACTAAAAAAAAAAT-TAATTTTAGGATT 944 CGATACTCAGA AGA GA AAGAAG G T A AAAAAA T TA TT A A T Sbjct: 70016 CGATACTCAGATAAGACGAT-AAGAAGTGAGTGGTTATAAAAAAGTGTACTTCAAATAAT 70074 Query: 943 TTAAGTTAACAGATCACAAAAACAAATACTATCAGGTGTACACTGCATTGCTATTTAAAG 884 T AA AACA A A AAA A TA T A G GTA AC AT G TATT AA G Sbjct: 70075 TAAATAAAACAAAAAAGGTAAAAATCTATTTAAAAG-GTA-ACAA-AT-G-TATT-AATG 70128 Query: 883 CTGCCTGT-GAATTTCTGTG---ATGCATTGGACAGGGTGCAAATACTATAATATACTAA 828 TGT GAA TT GTG A G TT GAC G T CAAATA T T A A A T A Sbjct: 70129 AATTTTGTAGAAATTGAGTGGCAAAGACTTTGACTTG-T-CAAATATTTTTACA-AGTCA 70185 Query: 827 ATATCCTTCACAAC-CAAAGCTTA-A--TTT-ACAACTATTTAATTT-A-TACTAGCTAG 775 TA TT ACAA CA G TT A TTT A A TA T AA T A T A TA Sbjct: 70186 TTAATTTTAACAAATCATTGTTTTCACGTTTTATAGATAATAAAAGTGAGTTAAATATAA 70245 Query: 774 AACCCTAGATGAACATTCTACAAT--TACACTATTTCAAAGGGATAGTATTTTTCAA-GA 718 AACC T G AA A C A AA TACAC T T AA G TAG AT TT A G Sbjct: 70246 AACCATGGGCCAAAAAACCAAAAAAGTACACACTAT-AATTAGTTAG-ATAATTGGATGT 70303 Query: 717 AATAAAAAGAT 707 AAT AAA GAT Sbjct: 70304 AATTAAA-GAT 70313 >M32612 Rat neural cell adhesion molecule (NCAM-C) gene, exon 1. Length = 1195 Plus Strand HSPs: Score = 342 (51.3 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 82/99 (82%), Positives = 82/99 (82%), Strand = Plus / Plus Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 || |||||||||||||||| |||||||| | ||||| ||||| ||||| ||||| |||| Sbjct: 307 AGGAGGAAGAGGAGGAAGAGGAGGAAGAGGGTGAGGAGGAGGAAGAGGAAGAAGAGGAAG 366 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 |||| ||||| || |||||||| || || || ||| ||| Sbjct: 367 AAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAG 405 Score = 342 (51.3 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 158/244 (64%), Positives = 158/244 (64%), Strand = Plus / Plus Query: 2097 TCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGGATATTGC 2156 TCC AATC T TTTCT CC A T T AT TCC TT CTT GGA G A A G Sbjct: 263 TCCACAATCCTCATTTCTCTCCAAATTTCCAATT-TCC-TTCACTTAGGAGGAAGAG-GA 319 Query: 2157 TGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAA-AAGGGAGTTGTCAAGGCTGAA 2214 G A A GAG A AGG AG GA G AG AA AAG G G G AGG GAA Sbjct: 320 GGAAGAG-GAGGAAGAGGGTGAGGAGGAGGAAGAGGAAGAAGAG-GAAGAAGAGGAAGAA 377 Query: 2215 AA--AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGG 2272 A AAG AAGA AAGAAG A GA GA GA GATGAGG A A GA GAG A GAGGAGG Sbjct: 378 GAGGAAG-AAGAGGAAGAAG-AGGAAGAAGAGGATGAGGGAAAGGAGGAGAA-GAGGAGG 434 Query: 2273 AGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATA-AGTTGGT 2331 AGGAGGA GA GAAGAA A GA GA GAAG AGAAG GA A GA GAA A TTG T Sbjct: 435 AGGAGGAGGAGGAAGAAAAGGA-GAAGAAGGAGAAGGAGAAAAGGAGGAAGCCATTTGCT 493 Query: 2332 TCTAGCGCA 2340 TCTA GCA Sbjct: 494 TCTATTGCA 502 Score = 326 (48.9 bits), Expect = 8.1e-05, P = 8.1e-05 Identities = 148/222 (66%), Positives = 148/222 (66%), Strand = Plus / Plus Query: 2097 TCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGGATATTGC 2156 TCC AATC T TTTCT CC A T T AT TCC TT CTT GGA G A A G Sbjct: 263 TCCACAATCCTCATTTCTCTCCAAATTTCCAATT-TCC-TTCACTTAGGAGGAAGAG-GA 319 Query: 2157 TGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAA-AAG-GGA-GTTGTC-AAG--G 2209 G A A GAG A AGG AG GA G AG AA AAG GGA G G AAG G Sbjct: 320 GGAAGAG-GAGGAAGAGGGTGAGGAGGAGGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAG 378 Query: 2210 CTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAG 2268 GAA AA AG AAGAA A GAAG AAGAGGA GA G AGGA GA GAAGAGGA GAG Sbjct: 379 AGGAAGAAGAGGAAGAAGAGGAAG-AAGAGGATGAGGGAAAGGAGGA-GAAGAGGAGGAG 436 Query: 2269 GAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 GAGGAGGAGGAAGA AAG AGA GAAG GAAG AGAA A GA GA G Sbjct: 437 GAGGAGGAGGAAGAA-AAGGAGAAGAAGGAGAAGGAGAAAAGGAGGAAG 484 Score = 269 (40.4 bits), Expect = 0.037, P = 0.036 Identities = 81/112 (72%), Positives = 81/112 (72%), Strand = Plus / Plus Query: 2215 AAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AA AG A GAA A G G A GAGGAGGAAGA GA GAAGA GAAGA GA GA GA GAG Sbjct: 322 AAGAGGAGGAAGAGGGTG-AGGAGGAGGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAG 380 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GAAGA GAAGAAGA GAAGA GA GA GA G A GA GA GAA A G Sbjct: 381 GAAGAAGAGGAAGAAGAGGAAGAAGAGGATGAGGGAAAGGAGGA-GAAGAGG 431 >Y13901 Homo sapiens FGFR-4 gene Length = 13,095 Minus Strand HSPs: Score = 348 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 126/188 (67%), Positives = 126/188 (67%), Strand = Minus / Plus Query: 2379 CAGGGGGGTTAAATGCTTTATAGACAAGAAAAAAAA-AACTGCGCTAGAACCAACT--TA 2323 CAGGG G T GC A GACAA A AA AA AACT C C CC CT T Sbjct: 11037 CAGGGTGTGTCCCGGCCAGAAGGACAACACTAACAACAACTCCTCGTCCTCCTCCTCCTC 11096 Query: 2322 TTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATC 2263 TTC TC TC TC TC TC TCTTC TC TC TC TCTTC TC TCCTCCTC TCCTC TC Sbjct: 11097 TTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTC 11156 Query: 2262 CTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCCTTGA 2204 CTCTTC TC TCCTC TCTTCCTCCTC TCCT CTT TC T CT T TTC CCT Sbjct: 11157 CTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCT-CTTCCTCCTCCTCCTCTTCCTCCTCCT 11215 Query: 2203 CAACTCCCT 2195 C CT CCT Sbjct: 11216 CCTCTTCCT 11224 Score = 322 (48.3 bits), Expect = 0.00023, P = 0.00023 Identities = 94/127 (74%), Positives = 94/127 (74%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC TC TC TC TC TCTTC TC TC TC TCTTC TC TCCTC TCCTCCTC TCC Sbjct: 11113 TCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCC 11172 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCCTTGAC 2203 TCTTC TC TCCTC TCTTCCTCCTC TCCT CTT TC T CT T TTC CCT C Sbjct: 11173 TCTTCCTCCTCCTCCTCTTCCTCCTCCTCCT-CTTCCTCCTCCTCCTCTTCCTCCTCCTC 11231 Query: 2202 AACTCCCT 2195 CT CCT Sbjct: 11232 CTCTTCCT 11239 Score = 321 (48.2 bits), Expect = 0.00025, P = 0.00025 Identities = 107/151 (70%), Positives = 107/151 (70%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC TC TC TC TCTTC TC TC TC TCTTC TC TC TCCTCCTCCTCCTC TCC Sbjct: 11320 TCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCC 11379 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCCT-TGA 2204 TCTTC TC TCCTC TCTTCCTCCTC TCCT CTT TC T CT T T CCT T Sbjct: 11380 TCTTCCTCCTCCTCCTCTTCCTCCTCCTCCT-CTTCCTCCTTCTCCTCCTGCTCCTCTTC 11438 Query: 2203 CAACTCCCTTTTTTGCTGCATCAGGCTT-TCCT 2172 C CTCC T TT CT C TC CT TCCT Sbjct: 11439 CTCCTCCTCCTCTTCCTCC-TCCTCCTCCTCCT 11470 Score = 320 (48.0 bits), Expect = 0.00028, P = 0.00028 Identities = 110/158 (69%), Positives = 110/158 (69%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TCCTCCTCCTCCTC TCC Sbjct: 11275 TCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC 11334 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCCTTGAC 2203 TCTTC TC TCCTC TCTTCCTCCTC TCCT CT T CT CT T TTC CCT C Sbjct: 11335 TCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTC-CTCCTCTTCCTCCTCCTC 11393 Query: 2202 AACTCCCTTTTT-TGCTGCATCAGGCTT-TCCTTTAGCTC 2165 CT CCT T T CT C TC CTT TCCT GCTC Sbjct: 11394 CTCTTCCTCCTCCTCCT-CTTCCTCCTTCTCCTCCTGCTC 11432 Score = 319 (47.9 bits), Expect = 0.00031, P = 0.00031 Identities = 109/156 (69%), Positives = 109/156 (69%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 C T TTC TC TC TC TCTTC TC TC TC TC TC TC TC TC TCCTCCTCCTCCT Sbjct: 11216 CCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT 11275 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCC 2208 C TCCTCTTC TC TCCTC TCTTCCTCCTC TCCT CT T CT CT T TC CC Sbjct: 11276 CCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTC-CTCCTCCTCCTCC 11334 Query: 2207 T-TGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCT 2172 T T C CTCC T TT CT C TC CT TCCT Sbjct: 11335 TCTTCCTCCTCCTCCTCTTCCTCC-TCCTCCTCCTCCT 11371 Score = 316 (47.4 bits), Expect = 0.00042, P = 0.00042 Identities = 88/115 (76%), Positives = 88/115 (76%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC TC TC TC TC TCTTC TC TC TCTTC TC TC TCCTC TCCTCCTC TCC Sbjct: 11128 TCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCC 11187 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCCT 2207 TCTTC TC TCCTC TCTTCCTCCTC TCCT CTT TC T CT T TTC CCT Sbjct: 11188 TCTTCCTCCTCCTCCTCTTCCTCCTCCTCCT-CTTCCTCCTCCTCCTCTTCCTCCT 11242 Score = 314 (47.1 bits), Expect = 0.00052, P = 0.00052 Identities = 110/159 (69%), Positives = 110/159 (69%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 C T TTC TC TC TC TCTTC TC TC TCTTC TC TC TC TCTTCCTCCTCCTCCT Sbjct: 11129 CCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCT 11188 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTT--TCTTGCTTTTT-TCAG 2210 C TCCTC TC TC TC TC TC TCCTCCTCTTCCT CT T TCTT CT T TC Sbjct: 11189 CTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCT 11248 Query: 2209 CCTTGACAACTCCCTTTTT-TGCTGCATCAGGCT-TTCCT 2172 CCT C C CCT T T CT C TC CT TTCCT Sbjct: 11249 CCTCCTCCTCCTCCTCCTCCTCCTCC-TCCTCCTCTTCCT 11287 Score = 308 (46.2 bits), Expect = 0.00098, P = 0.00098 Identities = 108/155 (69%), Positives = 108/155 (69%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TC TC TC TC TC TC TC TC TCTTC TC TC TC TCTTCCTCCTCCTCCT Sbjct: 11189 CTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCT 11248 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCC 2208 C TCCTC TC TC TCCTC TC TCCTCCTC TC TTC T TC T CT TT TC CC Sbjct: 11249 CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC-TTCCTCCTCCTCCTCTTCCTCCTCC 11307 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCT-TTCCT 2172 T C CTCC T T CT C TC CT TTCCT Sbjct: 11308 TCCTC--CTCCTCCTCCTCCTCC-TCCTCCTCTTCCT 11341 Score = 305 (45.8 bits), Expect = 0.0013, P = 0.0013 Identities = 89/120 (74%), Positives = 89/120 (74%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TC TC TC TC TC TC TC TC TCTTC TC TC TC TCTTCCTCCTCCTCCT Sbjct: 11174 CTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCT 11233 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCC 2208 C TCCTC TC TC TCCTC TC TCCTCCTC TCCT CT T CT CT TT TC CC Sbjct: 11234 CTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC-CTCTTCCTCCTCC 11292 Query: 2207 T 2207 T Sbjct: 11293 T 11293 Score = 302 (45.3 bits), Expect = 0.0018, P = 0.0018 Identities = 112/163 (68%), Positives = 112/163 (68%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 C T TTC TC TC TC TCTTC TC TC TC TC TC TC TC TC TCCTCCTCCTC T Sbjct: 11279 CCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTT 11338 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTT-T-TTCTTGCTTTTT-TCAG 2210 C TCCTC TC TCTTCCTC TC TCCTCCTC TCCT CT T TTC T CT T TC Sbjct: 11339 CCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTT 11398 Query: 2209 CCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTC 2165 CCT C CTCC TT T CT C TC CT TCCT T CTC Sbjct: 11399 CCTCCTC--CTCCTCTTCCTCCTTC-TCCTCCTGCTCCTCTTCCTC 11441 Score = 288 (43.2 bits), Expect = 0.0080, P = 0.0080 Identities = 96/134 (71%), Positives = 96/134 (71%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TC TC TC TC TC TC TC TC TCTTC TC TC TC TCTTCCTCCTCCTCCT Sbjct: 11351 CTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCT 11410 Query: 2266 CATCCTC-TTCATCTTC--CTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCA 2211 C TCCTC TTC CT C CTC TCTTCCTCCTC TCCT CTT TC T CT T TC Sbjct: 11411 CTTCCTCCTTCTCCTCCTGCTCCTCTTCCTCCTCCTCCT-CTTCCTCCTCCTCCTCCTCC 11469 Query: 2210 GCCT-TGACAACTCC 2197 CCT T C CTCC Sbjct: 11470 TCCTCTTCCTCCTCC 11484 Score = 257 (38.6 bits), Expect = 0.21, P = 0.19 Identities = 69/91 (75%), Positives = 69/91 (75%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 || || || || || ||||| || | || || | || ||||||||||||||||| ||| Sbjct: 11395 TCTTCCTCCTCCTCCTCTTCCTCCTTCTCCTCCTGCTCCTCTTCCTCCTCCTCCTCTTCC 11454 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCT 2231 || || || ||||| || || ||||| |||| Sbjct: 11455 TCCTCCTCCTCCTCCTCCTCTTCCTCCTCCT 11485 Score = 256 (38.4 bits), Expect = 0.23, P = 0.21 Identities = 72/94 (76%), Positives = 72/94 (76%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTC-TTCATCTTCATCTTCTTCATCTTCCTCCTCCTCC 2268 C T TTC TC TC TC TCTTC TC TTC TC TC T TC TC TC TCCTCCTCCTC Sbjct: 11393 CCTCTTCCTCCTCCTCCTCTTCCTCCTTC-TCCTCCTGCTCCTCTTCCTCCTCCTCCTCT 11451 Query: 2267 TCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC 2233 TC TCCTC TC TC TCCTC TCTTCCTCCTC TC Sbjct: 11452 TCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTC 11486 Score = 221 (33.2 bits), Expect = 9.0, P = 1.0 Identities = 61/82 (74%), Positives = 61/82 (74%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 || || || | || || | || ||||| || || || ||||||||||||||||| ||| Sbjct: 11410 TCTTCCTCCTTCTCCTCCTGCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCC 11469 Query: 2261 TCTTCATCTTCCTCATCTTCCT 2240 || || || ||||| || ||| Sbjct: 11470 TCCTCTTCCTCCTCCTCAGCCT 11491 >AL010164 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from contig Length = 16,741 Minus Strand HSPs: Score = 348 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 116/166 (69%), Positives = 116/166 (69%), Strand = Minus / Plus Query: 2331 ACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC 2272 A CA CTT TCATC TC TCATCTTCTTCTTC T TTCATCTTCTTC TCTT TC TC Sbjct: 10154 ATCATCTTCATCATCTTCGTCATCTTCTTCTTCTTGTTCATCTTCTTCTTCTTGTTCATC 10213 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TT 2213 TC TC TC T TTCATCTTC TC TCTT TC TCTT TTC T TT TT T TT TT Sbjct: 10214 TTCTTCTTCTTGTTCATCTTCTTCTTCTTGTTCATCTTG-TTCATCTTGTTCATCTTGTT 10272 Query: 2212 CAGCCTTGA-CAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCT 2166 CA C TTG CA CT T T T CT CATCA TT TTT CT Sbjct: 10273 CATC-TTGTTCATCTTGTTCATCTTCTCCATCATAATTATATTTCCCT 10319 Score = 344 (51.6 bits), Expect = 2.3e-05, P = 2.3e-05 Identities = 130/186 (69%), Positives = 130/186 (69%), Strand = Minus / Plus Query: 2331 ACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC 2272 A CA C T TTC TCATC TC TCTTC TC TC TC TCATCTTC TCATCTTC TC TC Sbjct: 10127 ATCATCATCTTCGTCATCTTCTTCTTCATCATCTTCATCATCTTCGTCATCTTCTTCTTC 10186 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-T 2214 T TCATC TCTTC TCTT TCATCTTC TC TCTT TTC T TTCTT CTT TT T Sbjct: 10187 TTGTTCATCTTCTTCTTCTTGTTCATCTTCTTCTTCTTG-TTCATCTTCTT-CTTCTTGT 10244 Query: 2213 TCAGCCTTGA-CAACTCCCTTTT-TTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAG 2156 TCA C TTG CA CT T T TTG T CATC G TTC T T G TC AT T C Sbjct: 10245 TCATC-TTGTTCATCTTGTTCATCTTGTT-CATCTTG--TTCATCTTGTTC-ATCTTCTC 10299 Query: 2155 CAATATCCTT 2146 CA AT TT Sbjct: 10300 CATCATAATT 10309 Score = 339 (50.9 bits), Expect = 3.8e-05, P = 3.8e-05 Identities = 117/162 (72%), Positives = 117/162 (72%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 T ATCAT ATCATC TCTTC TCATCTTC TCTTC TCATCTTC TC TC TC TCATC Sbjct: 10119 TTATCATTATCATCATCTTCGTCATCTTCTTCTTCATCATCTTCATCATCTTCGTCATCT 10178 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCAGCCTTGA 2204 TCTTC TCTT TCATCTTC TC TCTT TTC T TTCTT CTT TT TTCA C T Sbjct: 10179 TCTTCTTCTTGTTCATCTTCTTCTTCTTG-TTCATCTTCTT-CTTCTTGTTCATCTTCTT 10236 Query: 2203 CAACTCCCTTTT-TTGCTGCATCAGGCTTTCCTTTAGCTCGATAT 2160 C CT T T TTG T CATC G TTC T T G TC AT T Sbjct: 10237 CTTCTTGTTCATCTTGTT-CATCTTG--TTCATCTTGTTC-ATCT 10277 Score = 323 (48.5 bits), Expect = 0.00020, P = 0.00020 Identities = 123/172 (71%), Positives = 123/172 (71%), Strand = Minus / Plus Query: 2331 ACCAACTTATTCATCATCATCATCTTC--T-TCTTCATCTTCATCTTCTTCATCTTCCTC 2275 A CA CTT TCATC TCATC T TC T TC TCATCTTC TC TCTTC TCTTC TC Sbjct: 10097 ATCATCTTCGTCATCGTCATCGTTATCATTATCATCATCTTCGTCATCTTCTTCTTCATC 10156 Query: 2274 CTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT 2215 TC TC TCATC TC TCATCTTC TC TCTT TC TCTTC TTCTT TT TT T TT Sbjct: 10157 ATCTTCATCATCTTCGTCATCTTCTTCTTCTTGTTCATCTTC-TTCTTCTTGTTCATCTT 10215 Query: 2214 -TTCAGCCTTGA-CAACTCCCTTTT-TTGCTGCATCAGGCTTTCCTTTAGCTCGATAT 2160 TTC C TTG CA CT C T TT TTG T CATC G TTC T T G TC AT T Sbjct: 10216 CTTCTTC-TTGTTCATCTTCTTCTTCTTGTT-CATCTTG--TTCATCTTGTTC-ATCT 10268 >AC004095 Human Cosmid g1248a143 from 7q31.3, complete sequence. Length = 38,162 Plus Strand HSPs: Score = 259 (38.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05 Identities = 149/232 (64%), Positives = 149/232 (64%), Strand = Plus / Plus Query: 2096 TTCCTTAATCTTTTTT-TCT-TCC-CTACTGTTTTA-TCCTCCCTT-T-GC--TTTGGAA 2147 TT C AA CT TT T TCT TCC CTA T TT A T T TT T GC TTT A Sbjct: 8204 TTGCCAAAGCTCTTATCTCTCTCCTCTAATCTTAAAGTAGTGGATTGTAGCCATTTCCAT 8263 Query: 2148 GGATATTGCTGCATATCGAGCTAAAGGAAAGC--CTGATGCAGCAAAAAAGGGAGTTGTC 2205 G ATT CT T T GA TAA GAAA C CTG TG G AA A G A C Sbjct: 8264 GCCCATT-CTTAGTGTGGACATAATTGAAAACTTCTG-TGATGGAAGCAGGTCAAAA--C 8319 Query: 2206 AAGGCTGAA-AAAAGCAA-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG-AG 2262 AA GC AA AAAA C A G AAA AA AA AGGA G GA GA GAAGA GAAG AG Sbjct: 8320 AAAGCAAAATAAAAACCATGCTAAAAAA--AATAGGAAGGGGAAGAAGAAGAAGAAGGAG 8377 Query: 2263 GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAG-ATGATGATGATG 2320 GA GAGGAGGAGG GGAAG GAAGAAGA GAAGA G AG AG AG A GA GA GA G Sbjct: 8378 GAGGAGGAGGAGG-GGAAGGGGAAGAAGAGGAAGAAGGAGGAGGAGGAGGAGGAGGAGG 8435 Score = 249 (37.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05 Identities = 227/387 (58%), Positives = 227/387 (58%), Strand = Plus / Plus Query: 576 TCAAAGTTTC-TT-AGCTAATACTTGTTCATA-TTGGTTATATTTAAATAGTATAAAATT 632 TCAAA TTT TT AG TAA AC TT A A TT G TATATT TA T TAA TT Sbjct: 3961 TCAAAATTTAATTGAGGTAACACACTTTAAAACTTAGGTATATTCTCCTA-T-TAACCTT 4018 Query: 633 CCTGTTGGGTGGGAGTGTTCCCAGAGCATTTGAATTAGACATTTGGTCTCCTT--TGCCC 690 CT G T GA TTC G G TT GAAT AG A TT CT T T C Sbjct: 4019 TCTAA-GAATCAGAAATTTCGGGG-GTTTTGGAAT-AGGTAGTTCAACTAGGTAATTTCT 4075 Query: 691 AGTGTATCTCCTTTTGATCTTTTTATTTCTTGAAAAATACTATCCCTTT-GAAATAGTGT 749 AG GTA CT T A C TTA T T AAA T T TCC TTT G ATA Sbjct: 4076 AGAGTAGCTTGCAGTCACCAAATTAGGTGGTTCAAAGT--T-TCCATTTAGTCATAAATA 4132 Query: 750 AATTGTAGAATGTTCATCTAGGGTTCTA-GCTA-GTATAAATTAAATAGTTGTAAATTAA 807 AA T TA ATGT A CT G GTT T GC A GTATA TTAAA A T G A ATTA Sbjct: 4133 AAATATAATATGTA-AGCTTGTGTTATTTGCCATGTATACTTTAAACA-TAG-ATATTAG 4189 Query: 808 GCTTTGGTTGTGAAGGATATTTAGTATATTATAGTATTTGCACCCTGTC--C-AATGC-A 863 C T G TGT A AT TA ATA A GTA T A CTGT C AA G A Sbjct: 4190 ACATGGAATGTCCATCATTAATATCATAAAAACGTAACTTTATTCTGTAAACTAAAGATA 4249 Query: 864 T-CACAGAAA-TTCACAGGCAGCTTTAAATAGCAATG-CAGTGTAC-ACCTGATAGTATT 919 T CA A A TT CA G A C TTA A CA T C TGTAC A CT T G A T Sbjct: 4250 TTCAGATTCAGTTTTCATGAA-CATTATTGAACATTTACTATGTACTATCTATTGGAAAT 4308 Query: 920 TGTTTTTGTGATCTGTTAACTTAAAATCCTAAAATTAATTTT 961 T TTTTTG G TCT TTAACTTAAAA CC AAA TTAA T T Sbjct: 4309 TTTTTTTG-G-TCT-TTAACTTAAAAACCAAAACTTAAGTAT 4347 Score = 229 (34.4 bits), Expect = 0.00030, Sum P(2) = 0.00030 Identities = 97/144 (67%), Positives = 97/144 (67%), Strand = Plus / Plus Query: 2152 ATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCA-GCAAAAAAGGGAGTTGTCAAGGC 2210 AT G GCA TC A AAAG AAA A CA GC AAAAA A T G AAGG Sbjct: 8302 ATGGAAGCAGGTCAAAACAAAGCAAAATAAAAACCATGCTAAAAAAA-A-TAGG-AAGGG 8358 Query: 2211 TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGA-GG 2269 GAA AA G AAGAA AAG AGGA GAGGAGGA G AGG GA GAAGAGGA GA GG Sbjct: 8359 -GAAGAA-G-AAGAAGAAGGAGGAGGAGGAGGAGGGGAAGGG-GAAGAAGAGGAAGAAGG 8414 Query: 2270 AGGAGGAGGAAGATGAAGAAGATGAA 2295 AGGAGGAGGA GA GA GA G GAA Sbjct: 8415 AGGAGGAGGAGGAGGAGGAGGC-GAA 8439 Score = 219 (32.9 bits), Expect = 0.00082, Sum P(2) = 0.00082 Identities = 101/148 (68%), Positives = 101/148 (68%), Strand = Plus / Plus Query: 2140 CTT-TG-GAAGGATATTGCTGCATATCGA-GCTAAAGGAAAGCCTGATGC-AGCAAAAA- 2194 CTT TG GA GGA G T CA A C A GC AAA AAA CC ATGC A AAAAA Sbjct: 8294 CTTCTGTGATGGAAGCAGGT-CAAAACAAAGCAAAATAAAAACC--ATGCTAAAAAAAAT 8350 Query: 2195 AGGGAGTTGTCAAGGCTGAAAAA--AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGA 2252 AGG AG G A G GAA AA AG A GA A GA GG A AGG GGAAGA GAGGA Sbjct: 8351 AGGAAGGGGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGGGA-AGG-GGAAGAAGAGGA 8408 Query: 2253 AGATGAAG-AGGATGAGGAGGAGGAGGAAGATG 2284 AGA G AG AGGA GAGGAGGAGGAGG ATG Sbjct: 8409 AGAAGGAGGAGGAGGAGGAGGAGGAGGCGAATG 8441 >M18837 Mouse MHC class I Q4 beta-2-microglobulin (Qb-1) gene, complete Length = 5221 Minus Strand HSPs: Score = 347 (52.1 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 121/173 (69%), Positives = 121/173 (69%), Strand = Minus / Plus Query: 2328 AACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTC 2269 AA TT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC Sbjct: 2294 AATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 2353 Query: 2268 CTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGC 2209 TC TC TCTTC TCTTC TC TCTTC TC TCTTCCTTCT T TCT CT T T C Sbjct: 2354 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTCTCTCTCTCTCTCT-CTCT 2412 Query: 2208 CT-TGACAACTCCCTTTTTTGCTGCATCAGGCTTTC-CTTTAGCTCGATATGCAG 2156 CT T C CTC CT T T CT C TC CT TC CT T CTC T T CAG Sbjct: 2413 CTCTCTCT-CTCTCTCTCTCTCT-C-TCTCTCTCTCTCTCTCTCTCT-TCTTCAG 2463 Score = 334 (50.1 bits), Expect = 5.9e-05, P = 5.9e-05 Identities = 114/161 (70%), Positives = 114/161 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 2305 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 2364 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCT-TCTTTTTCTTGCTTTTT-TCAGC 2209 C TC TCTTC TCTTC TC TCTTCCT CTCT CT TCT T TCT CT T T TC Sbjct: 2365 CTTCTTCTTCTTCTTCTTCTTCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 2424 Query: 2208 CT-TGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCT 2166 CT T C CTC CT T T CT C TC CT T CTT AG T Sbjct: 2425 CTCTCTCT-CTCTCTCTCTCTCT-C-TCTCTCTCTTCTTCAGTT 2465 Score = 327 (49.1 bits), Expect = 0.00012, P = 0.00012 Identities = 109/155 (70%), Positives = 109/155 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 2314 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 2373 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTC-CTCTTCCT-TCTTTTTCTTGCTTTTT-TCAG 2210 C TC TCTTC TCTTCCT TCT CTC CTCT CT TCT T TCT CT T T TC Sbjct: 2374 CTTCTTCTTCTTCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 2433 Query: 2209 CCT-TGACAACTCCCTTTTTTGCTGCATCAGGCTTT 2175 CT T C CTC CT T T CT C TCAG TTT Sbjct: 2434 TCTCTCTCT-CTCTCTCTCTCTCTTCTTCAGTTTTT 2468 Score = 305 (45.8 bits), Expect = 0.0013, P = 0.0013 Identities = 117/164 (71%), Positives = 117/164 (71%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 2329 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 2388 Query: 2266 CATCCTCT-TCATCTTCCTCATCTTCCTC-CTCTTCCT-TCTTTTTCTTGCTTTTT-TCA 2211 C T CTCT TC TCT CTC TCT CTC CTCT CT TCT T TCT CT T T TC Sbjct: 2389 CCTTCTCTCTC-TCTCTCTC-TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 2446 Query: 2210 GCCT-TGACAACTCCCTTTTTTGCTGCATCAGGCTTTC-CTTTA-GCTC 2165 CT T C CT C TTTTTG G AT AGG TTTC CT TA GC C Sbjct: 2447 CTCTCTCTCTTCTTCAGTTTTTGA-G-AT-AGGGTTTCTCTGTATGCCC 2492 >X87461 M.merlangus DNA (CA)n (GGA)n polymorphic microsatellite (264 bp) Length = 264 Plus Strand HSPs: Score = 294 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05 Identities = 84/114 (73%), Positives = 84/114 (73%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AG A AG AGGA GAGGAGGA GA GAGGA GA GA GAGGA GAGGAGGAGGAGGA G Sbjct: 115 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGAGGAGGAGGAGGAGGAGGAGG 174 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAA-GATGATGATGATGAATAAGTTGGTTCT 2334 GA GA GA GA GA GAAGAAGA GA GA G GA GAA AAG G TTCT Sbjct: 175 GGGAGGAGGAGGAGGAGGAAGAAGAGTGAGGAAGCAGACGAAAAAGAAGATTCT 228 Score = 276 (41.4 bits), Expect = 0.00011, P = 0.00011 Identities = 76/99 (76%), Positives = 76/99 (76%), Strand = Plus / Plus Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AG AGGA GAGGAGGA GA GAGGA GA GA GAGGATGAGGAGGAGGAGGA GA GA G Sbjct: 115 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGAGGAGGAGGAGGAGGAGGAGG 174 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GA GA GA GA GAAGA GA G TGA GAA AG Sbjct: 175 GGGAGGAGGAGGAGGAGGAAGAAGA-G-TGAGGAAGCAG 211 Score = 263 (39.5 bits), Expect = 0.00043, P = 0.00043 Identities = 77/106 (72%), Positives = 77/106 (72%), Strand = Plus / Plus Query: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 AA AAAA G GG GAGG GGA GA GAGGA GA GA GAGGA GAGGAGGAGGAGGA Sbjct: 94 AAAAAAATGGTGGT-GAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAT 152 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GA GA GA GA GA GA G GA GA GA GA GA GAA AAG Sbjct: 153 GAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGAGGAGGAAGAAG 198 Score = 242 (36.3 bits), Expect = 0.0039, P = 0.0039 Identities = 82/117 (70%), Positives = 82/117 (70%), Strand = Plus / Plus Query: 2208 GGCTGAAAAAAGCAAGAAAAAGAAG-GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATG 2266 GGC G AAAA AA AAA G G GA G GGAGGA GA GAGGA GA GA GAGGA G Sbjct: 85 GGCGGGGAAAA--AA-AAATGGTGGTGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 141 Query: 2267 AGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATA 2324 AGGAGGAGGA GA GA GA GA GA GA GA G GA GA GA GA GA GA GAA A Sbjct: 142 AGGAGGAGGATGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGAGGAGGAAGAAGA 199 >Y00354 Xenopus laevis gene for vitellogenin A2 Length = 18,488 Minus Strand HSPs: Score = 345 (51.8 bits), Expect = 2.0e-05, P = 2.0e-05 Identities = 297/488 (60%), Positives = 297/488 (60%), Strand = Minus / Plus Query: 2337 GCTAGAACCAAC-TTATTCA-T-CATCATCATCTTCTTCTTCATCTTCATCTTCTTCATC 2281 GC A AA C C TTAT A T C TCATCATCTTCTTC TCATCTTCATC TCTTC TC Sbjct: 11312 GCAACAATCGTCATTATCTAGTTCTTCATCATCTTCTTCATCATCTTCATCCTCTTCTTC 11371 Query: 2280 TTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTT 2221 TC TC TC TC TC TC TC TCATCTTCC CATC TCCTCCTC TCCT CTT T Sbjct: 11372 GTCTTCTTCATCATCTTCATCCTCATCTTCCCCATCATCCTCCTCGTCCT-CTTCATACA 11430 Query: 2220 GCTTTTT-TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAG--GCTTTCCTTTAGCTCG 2164 G TC GA A C T T T CATCAG G TCC TAGC G Sbjct: 11431 GTAAAAGATCTAAAAGGAGAGAGCATAATCCTCAT-CATCAGAGGGAGTCCAGTAGCA-G 11488 Query: 2163 ATATGCAG-CAATATCCTTCCAAAGCAAAGGGAGGATAAAACAGTAGGGAAGAAAAAAAG 2105 TA GCAG CA A C CAAA AAAGG A AT CAG AG AGAAA A G Sbjct: 11489 -TA-GCAGTCAGGAGCAGAACAAAA-AAAGG-A--ATTTG-CAGGAGAATAGAAAGCATG 11541 Query: 2104 ATTAAGGAAAGAAAT-AGAA-CATGGCAGAA-CTTTATGAA-AGAAATCA-AGATTCTAG 2050 AA AA G AAT AG A CA GCAG A C TA A AG A T AG TAG Sbjct: 11542 GCCAA--AAGGGAATGAGTAGCA--GCAGTAGCAGTAGCAGCAGCAGTAGCAGCAG-TAG 11596 Query: 2049 TTATACCAAAA-TATCA-C-GTATCTGTAGATCCAC-AGCAACTCCAGAAATAACTAGAA 1994 T A CA A TA CA C G A C GTAG CA AGCA T AG AA AA TAGA Sbjct: 11597 TAGCAGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGTAGCAG-TG-AGGAA-AA-TAGAC 11652 Query: 1993 CTT-CAATAAATGA-A-CATAAAAATACAAGATCATTATAACAATCTATAACT-CATGAA 1938 C CAA AA GA A CAT A AATA A A CA A CA TCTA A C CAT AA Sbjct: 11653 CCCACAAGAATAGACAGCATGATAATAAACAAGCAAAAATGCAGTCTA-ATCAGCATCAA 11711 Query: 1937 ATGGCATAGT-CTAATATT-TGCAAAGTTATGCCTCATTGAGGTGCAATTATCTACCAGA 1880 G AG C AAT TT TG AAAG A GC CA T AG GCA T A C A CAG Sbjct: 11712 CAGAAGAAGAACAAATTTTCTG-AAAGC-A-GCAGCAGT-AGTAGCAGT-AGC-AGCAGC 11765 Query: 1879 TCCTAACTCTATTAAAACCAGAATGTAGAG 1850 AA T T A AA AGAA GTA AG Sbjct: 11766 AGTGAAATGTGGAACAAGAAGAAGGTACAG 11795 Score = 324 (48.6 bits), Expect = 0.00018, P = 0.00018 Identities = 236/391 (60%), Positives = 236/391 (60%), Strand = Minus / Plus Query: 2319 ATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTC 2260 ATC TCAT ATCT TTCTTCATC TC TCTTC TCATCTTC TCCTC TC TC TC TC Sbjct: 11318 ATCGTCATTATCTAGTTCTTCATCATCTTCTTCATCATCTTCATCCTCTTCTTCGTCTTC 11377 Query: 2259 TTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCCTTGACAA 2201 TTCATC TC TCATC TC TC TC CC TC T TC T T T TTCA C A AA Sbjct: 11378 TTCATCATCTTCATCCTCATCTTCC-CCATCATCCTCCTCGTCCTCTTCATACAGTAAAA 11436 Query: 2200 C-TCCCTTTTTTGCT-GCATCAGGCTTTCCTTTAGCTCGA-TAT-GCAGCAATATCCTTC 2145 TC G GCAT A CT C T AG GA T G AGCA TA C TC Sbjct: 11437 GATCTAAAAGGAGAGAGCATAATCCTCATCATCAGAGGGAGTCCAGTAGCAGTAGCAGTC 11496 Query: 2144 CAAAGCAAAGGGAGGATAAAACAGTAGG-GAAGAAAAAAAGATTAAGGAAAGAAATAGAA 2086 AGCA A A A A A A T G G AGAA A AA A A GG A AAA GAA Sbjct: 11497 AGGAGCAGAACAAAAAAAGGA-ATTTGCAGGAGAATAGAA-AGCATGGCCA-AAAGGGAA 11553 Query: 2085 C-A-TGGCAGAACTTTATGAAAGAAATCAAGATTCTAGTTATACCAAAA-TATCACGTAT 2029 A T GCAG A T A G A G A CA A C AGT A CA A TA CA G A Sbjct: 11554 TGAGTAGCAGCAGT--A-GCA-GTAG-CAGCAG-C-AGTAGCAGCAGTAGTAGCA-GCAG 11605 Query: 2028 CTGTAGATCCA-CAGCAACTCCAGAAATAACTAGA-ACTTCAATAAATGAACATAAAAAT 1971 C GTAG CA CAGCA CAG A TA C AG A AATA A CA AA AAT Sbjct: 11606 CAGTAGCAGCAGCAGCAGTAGCAGCAGTAGC-AGTGAGGAAAATAGACCC-CACAAGAAT 11663 Query: 1970 ACA-AG-ATCATTATAA-CAATCTATAACTCA-TGAAATG-GCAT 1931 A A AG AT AT ATAA CAA C A AA CA T AAT GCAT Sbjct: 11664 AGACAGCATGATAATAAACAAGCAAAAATGCAGTCTAATCAGCAT 11708 >Z75553 Caenorhabditis elegans cosmid ZC443 Length = 20,108 Minus Strand HSPs: Score = 344 (51.6 bits), Expect = 2.3e-05, P = 2.3e-05 Identities = 128/182 (70%), Positives = 128/182 (70%), Strand = Minus / Plus Query: 2325 TTAT-TCATCATCATCATCTTCTTC-TTCATCTTCATCTTCTTCATCTTCCTCCTCCTCC 2268 TT T TCATC TCATCATCTTC TTC TC TCATCTTC CAT TTCCTCCTCCTCC Sbjct: 10656 TTCTATCATCTTCATCATCTTCCAAATTC-TCATCATCTTCAACATTTTCCTCCTCCTCC 10714 Query: 2267 TCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTG-CTTTTTTCAGC 2209 TCATC TC TC TC TC TC TCTTC TCCTCTTC T CT TTT TTG CT TTT CAG Sbjct: 10715 TCATCATCATCGTCATCATCGTCTTCTTCCTCTTCATCCTCTTT-TTGACTCTTTCCAGA 10773 Query: 2208 CTTGACAACTCCCTTTTTT-GCTGCATC-AGGCTTTCCTTTAGCTCGATATGCAGCAATA 2151 T A CT T GCT C TC A G TTC TT AGCT G TA CA C A Sbjct: 10774 ATCCTTAGCTGTTGAGATGAGCTTC-TCGACGACTTCATTGAGCTTGTTAGCCA-CGTCA 10831 Query: 2150 TCCTTCC 2144 TC TTCC Sbjct: 10832 TC-TTCC 10837 Score = 237 (35.6 bits), Expect = 1.7, P = 0.82 Identities = 97/140 (69%), Positives = 97/140 (69%), Strand = Minus / Plus Query: 2344 AAACTGCG-CTAGAACCAACTTATTCATCATC-ATCATCTTCTTCT-TCATCTTCATCTT 2288 A ACT CG CT CA CT ATT A C T ATC TCT TTCT TCATCTTCATC T Sbjct: 10615 AGACTCCGACTGTCTGCATCTAATTGAGCTTTGATCTTCTG-TTCTATCATCTTCATCAT 10673 Query: 2287 CTTC-ATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTC 2229 CTTC A TTC TC TC TC TCA C T TTC TC TCCTC TC TC TC TC TC T C Sbjct: 10674 CTTCCAAATTC-TCATCATCTTCAACATTTTCCTCCTCCTCCTCATCATCATCGTCAT-C 10731 Query: 2228 TTTTTCTTGCTTT-T-TTCAGCCT 2207 T TCTT CTT T TTCA CCT Sbjct: 10732 ATCGTCTT-CTTCCTCTTCATCCT 10754 >Z82052 Caenorhabditis elegans cosmid T25E12 Length = 43,849 Minus Strand HSPs: Score = 344 (51.6 bits), Expect = 2.3e-05, P = 2.3e-05 Identities = 128/182 (70%), Positives = 128/182 (70%), Strand = Minus / Plus Query: 2325 TTAT-TCATCATCATCATCTTCTTC-TTCATCTTCATCTTCTTCATCTTCCTCCTCCTCC 2268 TT T TCATC TCATCATCTTC TTC TC TCATCTTC CAT TTCCTCCTCCTCC Sbjct: 10104 TTCTATCATCTTCATCATCTTCCAAATTC-TCATCATCTTCAACATTTTCCTCCTCCTCC 10162 Query: 2267 TCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTG-CTTTTTTCAGC 2209 TCATC TC TC TC TC TC TCTTC TCCTCTTC T CT TTT TTG CT TTT CAG Sbjct: 10163 TCATCATCATCGTCATCATCGTCTTCTTCCTCTTCATCCTCTTT-TTGACTCTTTCCAGA 10221 Query: 2208 CTTGACAACTCCCTTTTTT-GCTGCATC-AGGCTTTCCTTTAGCTCGATATGCAGCAATA 2151 T A CT T GCT C TC A G TTC TT AGCT G TA CA C A Sbjct: 10222 ATCCTTAGCTGTTGAGATGAGCTTC-TCGACGACTTCATTGAGCTTGTTAGCCA-CGTCA 10279 Query: 2150 TCCTTCC 2144 TC TTCC Sbjct: 10280 TC-TTCC 10285 Score = 237 (35.6 bits), Expect = 1.7, P = 0.82 Identities = 97/140 (69%), Positives = 97/140 (69%), Strand = Minus / Plus Query: 2344 AAACTGCG-CTAGAACCAACTTATTCATCATC-ATCATCTTCTTCT-TCATCTTCATCTT 2288 A ACT CG CT CA CT ATT A C T ATC TCT TTCT TCATCTTCATC T Sbjct: 10063 AGACTCCGACTGTCTGCATCTAATTGAGCTTTGATCTTCTG-TTCTATCATCTTCATCAT 10121 Query: 2287 CTTC-ATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTC 2229 CTTC A TTC TC TC TC TCA C T TTC TC TCCTC TC TC TC TC TC T C Sbjct: 10122 CTTCCAAATTC-TCATCATCTTCAACATTTTCCTCCTCCTCCTCATCATCATCGTCAT-C 10179 Query: 2228 TTTTTCTTGCTTT-T-TTCAGCCT 2207 T TCTT CTT T TTCA CCT Sbjct: 10180 ATCGTCTT-CTTCCTCTTCATCCT 10202 >M15825 Chinese hamster nucleolin (C23) mRNA. Length = 2229 Plus Strand HSPs: Score = 341 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05 Identities = 119/174 (68%), Positives = 119/174 (68%), Strand = Plus / Plus Query: 2167 GCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAA 2226 GC AAAGGAAAG G T C GCAAAA G TGT AA GC AA AA G G Sbjct: 556 GCCAAAGGAAAGAAAGCTCCTGCAAAAGTTGTTCCTGTGAAAGCC-AAGAATGTG-GCTG 613 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 A GA GGA GA GA GA GA GAGGA GATGAAGA GA GAGGAGGA GA GAAGA GAA Sbjct: 614 AGGA-GGATGATGATGATGAAGAGGAGGATGAAGATGAGGAGGAGGATGAAGAAGAGGAA 672 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGC-GCA 2340 GAAGATGA GA GA GA GAAGA GA GA GA GAA A TG TT A C GCA Sbjct: 673 GAAGATGAGGAGGAGGAGGAAGAGGAAGAAGAGGAAGAGCCTG-TTAAACCAGCA 726 Score = 305 (45.8 bits), Expect = 0.0011, P = 0.0011 Identities = 99/138 (71%), Positives = 99/138 (71%), Strand = Plus / Plus Query: 2163 TCGAGCTAAAGGAAAGCCTGATGCA-GCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGC 2220 TC GC AAAG CCTG TG A GC AA AA G G TG AGG TGA A A Sbjct: 573 TCCTGCAAAAGTTGTTCCTG-TGAAAGCCAAGAATGTGGCTGAGGAGGATGATGATGATG 631 Query: 2221 AAGAAAAAGAAGGA-A-GAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGG 2278 AAGA A GA G A A GAGGAGGA GATGA GAAGA GAAGA GATGAGGAGGAGGAGG Sbjct: 632 AAGAGGAGGATGAAGATGAGGAGGAGGATGAAGAAGAGGAAGAAGATGAGGAGGAGGAGG 691 Query: 2279 AAGATGAAGAAGATGAAGA 2297 AAGA GAAGAAGA GAAGA Sbjct: 692 AAGAGGAAGAAGAGGAAGA 710 Score = 264 (39.6 bits), Expect = 0.082, P = 0.078 Identities = 72/89 (80%), Positives = 72/89 (80%), Strand = Plus / Plus Query: 2235 AGAGGAGGAAGATGAGGAAGA---TGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGA 2291 AGAGGA GAAGA GAGGAAGA TGAAGAGGA GAGGAGGAGGA GAAGA GA GA GA Sbjct: 459 AGAGGATGAAGACGAGGAAGAGGATGAAGAGGAGGAGGAGGAGGATGAAGAGGAGGAGGA 518 Query: 2292 TGAAGATGAAGAAGAAGATGATGATGATGA 2321 TGA TGAAGAAGAAGA G T ATG GA Sbjct: 519 TGACTCTGAAGAAGAAGAAGCT-ATGGAGA 547 Score = 249 (37.4 bits), Expect = 0.40, P = 0.33 Identities = 87/125 (69%), Positives = 87/125 (69%), Strand = Plus / Plus Query: 2208 GGCTGAAAAAAGCAAGAAA---AAGAAGGAAGAGGAG-GAAGATGAGGAAGATGAAGAGG 2263 GGCT A AA G AAGAA AAGAAGGAAGA AG GA GA GA GAAGATGA GA G Sbjct: 291 GGCTAAGAATGGTAAGAATGCTAAGAAGGAAGAC-AGTGATGAAGATGAAGATGACGACG 349 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 ATGA GA GA GA GATGA GA GA GA GATGA GAAGA GATGA TGA A Sbjct: 350 ATGATGAAGACGACAGTGATGAGGATGAAGAGGATGAGGAAGAGGATGAATTTGAGCCAC 409 Query: 2324 AAGTTG 2329 AGT G Sbjct: 410 CAGTAG 415 Score = 245 (36.8 bits), Expect = 0.61, P = 0.46 Identities = 69/91 (75%), Positives = 69/91 (75%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGG 2275 A AG A GAA A GA GGAAGAGGA GAAGA GAGGA GA GA GA GA GAGGAGGAGG Sbjct: 459 AGAGGATGAAGACGA-GGAAGAGGATGAAGAGGAGGAGGAGGAGGATGAAGAGGAGGAGG 517 Query: 2276 AGGAAGATGAAGAAGATGAAGATGAAGAAGA 2306 A GA TGAAGAAGA GAAG T A G AGA Sbjct: 518 ATGACTCTGAAGAAGAAGAAGCT-ATGGAGA 547 >Z71255 S.cerevisiae chromosome XVI 165536 bp sequence, cen rightwards. Length = 165,536 Minus Strand HSPs: Score = 312 (46.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05 Identities = 96/130 (73%), Positives = 96/130 (73%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TCCTC TC T Sbjct: 6327 CTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTT 6386 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCT-TGCTTTTTTCAG-C 2209 C TC TCTTC TCTTC TCATC TC C T TCCT C TTT C TG TTTT C C Sbjct: 6387 CTTCTTCTTCTTCTTCGTCATCATCACCATTATCCT-CATTTCCACTGGTTTTCACTTTC 6445 Query: 2208 CTTGACAACTCC 2197 C T A AA TCC Sbjct: 6446 CATAAAAA-TCC 6456 Score = 294 (44.1 bits), Expect = 0.00017, Sum P(2) = 0.00017 Identities = 80/105 (76%), Positives = 80/105 (76%), Strand = Minus / Plus Query: 2325 TTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTC 2266 TT TC TC TC T TCTTCTTCTTC T TTC TCTTCTTC TCTTC TC TC TC TC Sbjct: 6301 TTGCTCTTCTTCTTTTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 6360 Query: 2265 ATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTT 2221 TC TCTTC TCTTC TC TCTTC TC TCTTC TTCTT TTC T Sbjct: 6361 TTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTC-TTCTTCTTCGT 6404 Score = 288 (43.2 bits), Expect = 0.00030, Sum P(2) = 0.00030 Identities = 82/111 (73%), Positives = 82/111 (73%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC T TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 6318 CTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 6377 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTT 2216 C TC TCTTC TCTTC TC TCTTC TC TC TC C TT TC T TTT Sbjct: 6378 CCTCTTCTTCTTCTTCTTCTTCTTCGTCATCATCAC-CATTATCCTCATTT 6427 Score = 203 (30.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05 Identities = 89/136 (65%), Positives = 89/136 (65%), Strand = Minus / Plus Query: 1153 ACTTCTTACCTT-TTCGTATTT-TTCCT-TCAGCTTCGCAGCCTTCTTTTCATAAGGCTG 1097 ACT CTT C TTC TAT T TTC T TC GC T G GCCTT TC TAAGGCTG Sbjct: 135339 ACTCCTTTTCGGATTCATATCTCTTCTTATCGGCCTGG--GCCTTGGCCTCGTAAGGCTG 135396 Query: 1096 CTTGTCATCTGCAGC-AGTGTTATTCCACATCTCTCCCAGTTTCTTCGCAACATCACCAA 1038 CTT TC TCTG G AG G TTCCAC TCTC CCCA TTCTT C AC T CCAA Sbjct: 135397 CTTTTCCTCTGGCGTTAGAGCC-TTCCACTTCTCACCCAACTTCTTGCCGACTTGTCCAA 135455 Query: 1037 TGGACAGGCCAGGATGTTC 1019 G A C GGAT TTC Sbjct: 135456 ATGTGATATCTGGATTTTC 135474 >AF002843 Melipona bicolor microsatellite sequence Mbi254AAG. Length = 362 Plus Strand HSPs: Score = 286 (42.9 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 94/133 (70%), Positives = 94/133 (70%), Strand = Plus / Plus Query: 2212 GAAAAAAGCAAGAAAAAGA-AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 GAAAA A AAGAA A G A GA GA GA GAAGA A GAA A AA AGGA AG A Sbjct: 100 GAAAAGAAAAAGAAGACGCGACGACGATGACGAAGAACAAGAAAAGCAAAAGGAGAAGAA 159 Query: 2271 GGAG--GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG-T 2327 G AG GA GAAGA GAAGAAGA GAAGA GAAGAAGAAGAT A GA GA GA AAG T Sbjct: 160 GAAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATNAAGAAGAGGAGGAAGAT 219 Query: 2328 TGG-TTCTAGCGC 2339 T G TTCT CGC Sbjct: 220 TTGCTTCTCTCGC 232 >X15750;X15209 Rabbit skeletal muscle mRNA for ryanodine receptor Length = 15,361 Plus Strand HSPs: Score = 341 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05 Identities = 135/201 (67%), Positives = 135/201 (67%), Strand = Plus / Plus Query: 2127 TATCCTCCCTTTGCTTTGGAAGGATATTGCTG-C-ATATCGAGCTAAAGGAAAGCCTGAT 2184 T TCC CCCT GCT GA GG AT TG C AT GA T AAG A A C T A Sbjct: 5665 TGTCCACCCT--GCTGGTGATGGGCATCTTTGGCGATGAGGATGTGAAGCAGATCTTAAA 5722 Query: 2185 GCAGCAAAAAAGGGA-GTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGG 2242 G G A AA GA GTT TCA G GAA A AG A GAA AAGA GGA GAGGAGG Sbjct: 5723 GATGATAGAACCTGAAGTTTTCACCGAGGAAGAGGAGGAGGAAGAAGA-GGAGGAGGAGG 5781 Query: 2243 AAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAG 2302 AAGA GAGGA GA GA GAGGA GA GAGGA AGGAAGA GA GA GA GAAGA GA G Sbjct: 5782 AAGAAGAGGAGGAAGAGGAGGACGAAGAGGAAAAGGAAGAGGACGAGGAGGAAGAGGA-G 5840 Query: 2303 AAG-AAGATGATGATGATGAATAAG 2326 AAG AAGATG TGA A GA AAG Sbjct: 5841 AAGGAAGATGCTGAAAAAGAGGAAG 5865 Score = 308 (46.2 bits), Expect = 0.00099, P = 0.00099 Identities = 156/235 (66%), Positives = 156/235 (66%), Strand = Plus / Plus Query: 2079 TGCCATGTTCTATTTCTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCC-CTT 2137 T CCA GTTC T C T CT AA CT T T C CCCT CTG T AT C CTT Sbjct: 5637 TTCCA-GTTCG-TGCCGGTGCTCAAGCTCGTGTCCA-CCCTGCTGGTG-ATGGGCATCTT 5692 Query: 2138 TG-CTTTGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAG--CCTGATG----CAGCA 2190 TG C TG AGGAT T G GCA ATC A A GA AG CCTGA G CA C Sbjct: 5693 TGGCGATG--AGGATGT-GAAGCAGATCTTAA-AGATGATAGAACCTGAAGTTTTCACCG 5748 Query: 2191 AAAAAG-GGAGTTGTCA-AGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGAT 2247 A AAG GGAG G A A G GA A AG AAGAA A GA GGAAGAGGAGGA GA Sbjct: 5749 AGGAAGAGGAGGAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGA-GGAAGAGGAGGACGAA 5807 Query: 2248 GAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAA 2307 GAGGAA A GAAGAGGA GAGGAGGA GAGGA A GAAGA G TGAA A GA GAAGA Sbjct: 5808 GAGGAAAAGGAAGAGGACGAGGAGGAAGAGGAGAAGGAAGATGCTGAAAAAGAGGAAGAG 5867 Query: 2308 GATG 2311 GA G Sbjct: 5868 GAGG 5871 Score = 269 (40.4 bits), Expect = 0.059, P = 0.057 Identities = 103/156 (66%), Positives = 103/156 (66%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC--AAGAAAA-AGA-AGGAAGA 2237 GATG AG A A G AG T T AA G TGA A AA C AAG A AGGAAGA Sbjct: 5697 GATG-AGGATGTGAAGCAGATCTTAAAGATGATAGAACCTGAAGTTTTCACCGAGGAAGA 5755 Query: 2238 GGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGA 2297 GGAGGA GA GA GA GA GA GAGGA GA GAGGAGGA GA GA GA GAAGA GAA A Sbjct: 5756 GGAGGAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAGGACGAAGAGGAAAA 5815 Query: 2298 TGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCT 2334 GAAGA GA GA GA GA GA GA A G G T CT Sbjct: 5816 GGAAGAGGACGAGGAGGAAGAGGAGAAGGAAGATGCT 5852 Score = 231 (34.7 bits), Expect = 3.2, P = 0.96 Identities = 101/161 (62%), Positives = 101/161 (62%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AAAAGCAA 2222 GAG A A GA AG GA G AG A A AGG AG G A G GA AAAAG AA Sbjct: 5760 GAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAGGACGAAGAGGAAAAGGAA 5819 Query: 2223 GAAAAAGA--AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 GA A GA AGGAAGAGGAG A GA GA G GA AAGAGGA GAGGAGG GGAA Sbjct: 5820 GAGGACGAGGAGGAAGAGGAGAAGGAAGATGCTGAAAAAGAGGAAGAGGAGGCCCCGGAA 5879 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 G GAA AAGA GA TG AG AG G TG T GATGAA Sbjct: 5880 GGGGAAAAAGAAGATT-TGGAGGAGGGGCTGCTCCAGATGAA 5920 >X15209 O.cuniculus mRNA for skeletal muscle ryanodine receptor Length = 15,823 Plus Strand HSPs: Score = 341 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05 Identities = 135/201 (67%), Positives = 135/201 (67%), Strand = Plus / Plus Query: 2127 TATCCTCCCTTTGCTTTGGAAGGATATTGCTG-C-ATATCGAGCTAAAGGAAAGCCTGAT 2184 T TCC CCCT GCT GA GG AT TG C AT GA T AAG A A C T A Sbjct: 6127 TGTCCACCCT--GCTGGTGATGGGCATCTTTGGCGATGAGGATGTGAAGCAGATCTTAAA 6184 Query: 2185 GCAGCAAAAAAGGGA-GTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGG 2242 G G A AA GA GTT TCA G GAA A AG A GAA AAGA GGA GAGGAGG Sbjct: 6185 GATGATAGAACCTGAAGTTTTCACCGAGGAAGAGGAGGAGGAAGAAGA-GGAGGAGGAGG 6243 Query: 2243 AAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAG 2302 AAGA GAGGA GA GA GAGGA GA GAGGA AGGAAGA GA GA GA GAAGA GA G Sbjct: 6244 AAGAAGAGGAGGAAGAGGAGGACGAAGAGGAAAAGGAAGAGGACGAGGAGGAAGAGGA-G 6302 Query: 2303 AAG-AAGATGATGATGATGAATAAG 2326 AAG AAGATG TGA A GA AAG Sbjct: 6303 AAGGAAGATGCTGAAAAAGAGGAAG 6327 Score = 308 (46.2 bits), Expect = 0.00099, P = 0.00099 Identities = 156/235 (66%), Positives = 156/235 (66%), Strand = Plus / Plus Query: 2079 TGCCATGTTCTATTTCTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCC-CTT 2137 T CCA GTTC T C T CT AA CT T T C CCCT CTG T AT C CTT Sbjct: 6099 TTCCA-GTTCG-TGCCGGTGCTCAAGCTCGTGTCCA-CCCTGCTGGTG-ATGGGCATCTT 6154 Query: 2138 TG-CTTTGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAG--CCTGATG----CAGCA 2190 TG C TG AGGAT T G GCA ATC A A GA AG CCTGA G CA C Sbjct: 6155 TGGCGATG--AGGATGT-GAAGCAGATCTTAA-AGATGATAGAACCTGAAGTTTTCACCG 6210 Query: 2191 AAAAAG-GGAGTTGTCA-AGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGAT 2247 A AAG GGAG G A A G GA A AG AAGAA A GA GGAAGAGGAGGA GA Sbjct: 6211 AGGAAGAGGAGGAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGA-GGAAGAGGAGGACGAA 6269 Query: 2248 GAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAA 2307 GAGGAA A GAAGAGGA GAGGAGGA GAGGA A GAAGA G TGAA A GA GAAGA Sbjct: 6270 GAGGAAAAGGAAGAGGACGAGGAGGAAGAGGAGAAGGAAGATGCTGAAAAAGAGGAAGAG 6329 Query: 2308 GATG 2311 GA G Sbjct: 6330 GAGG 6333 Score = 269 (40.4 bits), Expect = 0.059, P = 0.057 Identities = 103/156 (66%), Positives = 103/156 (66%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC--AAGAAAA-AGA-AGGAAGA 2237 GATG AG A A G AG T T AA G TGA A AA C AAG A AGGAAGA Sbjct: 6159 GATG-AGGATGTGAAGCAGATCTTAAAGATGATAGAACCTGAAGTTTTCACCGAGGAAGA 6217 Query: 2238 GGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGA 2297 GGAGGA GA GA GA GA GA GAGGA GA GAGGAGGA GA GA GA GAAGA GAA A Sbjct: 6218 GGAGGAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAGGACGAAGAGGAAAA 6277 Query: 2298 TGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCT 2334 GAAGA GA GA GA GA GA GA A G G T CT Sbjct: 6278 GGAAGAGGACGAGGAGGAAGAGGAGAAGGAAGATGCT 6314 Score = 231 (34.7 bits), Expect = 3.2, P = 0.96 Identities = 101/161 (62%), Positives = 101/161 (62%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AAAAGCAA 2222 GAG A A GA AG GA G AG A A AGG AG G A G GA AAAAG AA Sbjct: 6222 GAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAGGACGAAGAGGAAAAGGAA 6281 Query: 2223 GAAAAAGA--AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 GA A GA AGGAAGAGGAG A GA GA G GA AAGAGGA GAGGAGG GGAA Sbjct: 6282 GAGGACGAGGAGGAAGAGGAGAAGGAAGATGCTGAAAAAGAGGAAGAGGAGGCCCCGGAA 6341 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 G GAA AAGA GA TG AG AG G TG T GATGAA Sbjct: 6342 GGGGAAAAAGAAGATT-TGGAGGAGGGGCTGCTCCAGATGAA 6382 >Z83122 Caenorhabditis elegans cosmid R11A5 Length = 26,671 Plus Strand HSPs: Score = 341 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05 Identities = 117/163 (71%), Positives = 117/163 (71%), Strand = Plus / Plus Query: 2162 ATCGAGCTAAAGGAAA--GCCTGATGCAG-CAAAAAAGGGAGTTGTCAAGGCTGAAAA-- 2216 A CGA AA GAAA G TGAT G C AA AAG AG TG A G TGAA A Sbjct: 4517 ACCGAATGAATTGAAATTGGATGATAGTGACGAAGAAGA-AGATGATGATGATGAAGATG 4575 Query: 2217 AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGA 2276 AAG AAGAA A GAAG A GA GA GA GA GA GAAGATGAAGA GATGAGGA GAGGA Sbjct: 4576 AAG-AAGAAGACGAAG-ATGAAGAAGAGGAGGATGAAGATGAAGAAGATGAGGAAGAGGA 4633 Query: 2277 GGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 GAA ATGAA AGA GAAGA GA GAAGA GATGA GATGA GAA Sbjct: 4634 AGAAAATGAATCAGAAGAAGAAGAGGAAGATGATGAGGATGAAGAA 4679 Score = 336 (50.4 bits), Expect = 5.3e-05, P = 5.3e-05 Identities = 118/168 (70%), Positives = 118/168 (70%), Strand = Plus / Plus Query: 2162 ATCGAGCTAAAGGAAA--GCCTGATGCAG-CAAAAAAGGGAGTTGTCAAGGCTGAAAAAA 2218 A CGA AA GAAA G TGAT G C AA AAG AG TG A G TGAA A Sbjct: 4517 ACCGAATGAATTGAAATTGGATGATAGTGACGAAGAAGA-AGATGATGATGATGAAGAT- 4574 Query: 2219 GCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGG 2278 G AAGAA AAGA G AAGA GA GAAGA GAGGA GA GA GA GA GA GAGGA GAGG Sbjct: 4575 G-AAGAAGAAGACG-AAGATGAAGAAGAGGAGGATGAAGATGAAGAAGATGAGGAAGAGG 4632 Query: 2279 AAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 AAGA A GAA GAAGA GAAGA GAAGATGATGA GATGAA AA TG Sbjct: 4633 AAGAAAATGAATCAGAAGAAGAAGAGGAAGATGATGAGGATGAAGAAAGTG 4683 Score = 320 (48.0 bits), Expect = 0.00028, P = 0.00028 Identities = 122/178 (68%), Positives = 122/178 (68%), Strand = Plus / Plus Query: 2147 AGGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205 A GAT TG TG A AT AG AAG AAG TGA G AG A A G AG TG Sbjct: 4558 ATGATGATGATGAAGATGAAGAAGAAGACGAAGA-TGAAGAAGAGGAGGATGAAGATGAA 4616 Query: 2206 AAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 A G TGA AA AG AAGAAAA GAA A GA GA GAAGA GA GA GATGA GA GA Sbjct: 4617 GAAGATGAGGAAGAGGAAGAAAATGAATCA-GAAGAAGAAGAGGAAGATGATGAGGATGA 4675 Query: 2265 TGAGGAG-GAGGAGGAA---GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 GA AG GA GAGGAA GATGAAGAAGATGAAGA GA GAAGAAGA GATGAT TG Sbjct: 4676 AGAA-AGTGAAGAGGAATCTGATGAAGAAGATGAAGAGGAGGAAGAAGAGGATGATAGTG 4734 Query: 2321 A 2321 A Sbjct: 4735 A 4735 Score = 320 (48.0 bits), Expect = 0.00028, P = 0.00028 Identities = 132/194 (68%), Positives = 132/194 (68%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCAT-ATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTT 2202 GAAG A AT G TG AT AT AG T AAG A AAG C GA G G A AA AGG G T Sbjct: 4551 GAAGAAGAT-GATG-ATGATGAAGATGAAGAAGAAGAC-GAAGATGAAGAAGAGGAGGAT 4607 Query: 2203 GTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 G AAG TGAA AA G A GA AAGA GGAAGA A GAA T AG AAGA GAAGAG Sbjct: 4608 G--AAGA-TGAAGAA-G-ATGAGGAAGA-GGAAGAAAATGAA--TCAG-AAGAAGAAGAG 4658 Query: 2263 GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 GA GA GA GAGGA GAAGA GAAGA GAA TGA GAAGAAGATGA GA GA GAA Sbjct: 4659 GAAGATGATGAGGATGAAGAAAGTGAAGAGGAATCTGATGAAGAAGATGAAGAGGAGGAA 4718 Query: 2323 TAAGTTGGTTCTAGCG 2338 AAG G T TAG G Sbjct: 4719 GAAGAGGATGATAGTG 4734 Score = 316 (47.4 bits), Expect = 0.00043, P = 0.00043 Identities = 132/187 (70%), Positives = 132/187 (70%), Strand = Plus / Plus Query: 2143 TGGAAGGATATTGC-TGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAG 2200 TG A GA ATTG TG ATA GA C AA G A AAG TGATG G AA A G AG Sbjct: 4523 TGAATTGAAATTGGATG-ATAGTGA-CGAA-GAAGAAGA-TGATGATGATGAAGATGAAG 4578 Query: 2201 TTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGA 2258 G AAG C GAA A G AAGAA A GA G GAAGA GA GAAGATGAGGAAGA GA Sbjct: 4579 AAG--AAGAC-GAAGAT-G-AAGAAGAGGAGGATGAAGATGAAGAAGATGAGGAAGAGGA 4633 Query: 2259 AGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAA-G--AAGATGATGA 2315 AGA ATGA GA GA GAAGA GAAGA GATGA GATGAAGAA G AAGA GA Sbjct: 4634 AGAAAATGAATCAGAAGAAGAAGAGGAAGATGATGAGGATGAAGAAAGTGAAGAGGAATC 4693 Query: 2316 TGATGAATAAGTTG 2329 TGATGAA AAG TG Sbjct: 4694 TGATGAAGAAGATG 4707 Score = 279 (41.9 bits), Expect = 0.021, P = 0.021 Identities = 117/167 (70%), Positives = 117/167 (70%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGCAGCAAAA-AAGGGAG-TTG--TCAAGGCTGAA-AA-AAGCAAG 2223 AAA GAA GC ATGCA C AA AA GA TTG T A G TGA AA AAG AAG Sbjct: 4502 AAAAGAA-GCAC-ATGCACCGAATGAATTGAAATTGGATGATAG-TGACGAAGAAG-AAG 4557 Query: 2224 AAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGA-G--G 2278 A A GA G GAAGA GA GAAGA GA GAAGATGAAGA GA GAGGA GA GA G G Sbjct: 4558 ATGATGATGATGAAGATGAAGAAGAAGACGAAGATGAAGAAGAGGAGGATGAAGATGAAG 4617 Query: 2279 AAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 AAGATGA GAAGA GAAGA A GAA AGA GA GA GA GAA A G TG Sbjct: 4618 AAGATGAGGAAGAGGAAGAAAATGAATCAGAAGAAGAAGAGGAAGATGATG 4668 >Y08925 P.falciparum aarp3 gene, exon Length = 974 Plus Strand HSPs: Score = 332 (49.8 bits), Expect = 3.4e-05, P = 3.4e-05 Identities = 300/505 (59%), Positives = 300/505 (59%), Strand = Plus / Plus Query: 1827 AGTGTCTACCCTTTAATCAAAGTCTCTACATTC-TGGTTTTAATAGAGTTAGGATCTGGT 1885 AGTG C A TTTA T AAA T T A AT T T T AAT T A GAT T Sbjct: 194 AGTGACAAGTATTTATTAAAAAT-TAAAGATAAATTATATGAATTTTATAAAGATTTTCA 252 Query: 1886 AGATAAT--TGCACCTCA-ATGAGGCATAACTTTGCAAATATTAGACTATGCCATTTCAT 1942 A ATAAT T A C CA ATGAG AT A TT CAA TAT G T GCCA AT Sbjct: 253 AAATAATAATAAAACACATATGAGAAATGATTTACCAACTAT--G--TGGGCCAAAA-AT 307 Query: 1943 GAGTT--ATAGATTGT-TATAATGATCTTGTATTTTTATGTTC-ATTTAT--TGAAGTTC 1996 GA TT AT ATT TATAA ATCTT TA A T ATT AT TG AG T Sbjct: 308 GATTTTGATCAATTCCATATAA--ATCTTATAAAAAAAATTAAGATTCATAATGGAGGTA 365 Query: 1997 TAGTTATTTCTGGAGTTGC-TGTG-GATCTACAGATACGTGAT-ATTTTGGTATAACTAG 2053 TA T TT TG TT C T GA TA A T GTG T A T G TAT A AG Sbjct: 366 TA-TCCTTCTTGTTCTTACATAAAAGAGGTAAATTTCTGTGTTCAGCTAGCTATGAG-AG 423 Query: 2054 AATCTTGATT-TCTTTCATAAAGTT-CT-GCCATGTTCT-ATTTCTTTCC-T-TAATCTT 2107 A TC T ATT T TT A A AG CT G A GTT T A T C T TA C Sbjct: 424 ATTCATAATTATACTTAACACAGAAACTAGAAAGGTTATTAAAAGGATACATGTAGGCCA 483 Query: 2108 TTTTTCTTCCCTACTGTTT-TATCCTCCCTTTGCTTTGGAAGGATATTGCTGCATATCGA 2166 T TT CTT C TGTTT T TC T C T T GAAG A A TGC CATA C A Sbjct: 484 TGTT-CTTACAAGTTGTTTATTTCATTCGAAAATTCTTGAAGAA-AGTGCA-CATA-C-A 538 Query: 2167 GCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC-AAGAA 2225 AAAGG A TGAT G A GG G T TCA CTGA A G AAGAA Sbjct: 539 ---AAAGGGGACAATGATTGTGTTAGTTGGGCTGAT-TCAT--CTGAGGAGGGAGAAGAA 592 Query: 2226 AAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 A GA G GAA A GA GA GATGAGGAAGATGA GA GATGAGGA GA GA GA GAT Sbjct: 593 GATGATGATGAAAATGACGATGATGAGGAAGATGACGATGATGAGGAAGATGACGATGAT 652 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 GAA A GA GA GATGAA A GA GATGATGA ATGA A G TG Sbjct: 653 GAAAATGACGATGATGAAAATGATGATGATGAAAATGACGATGATG 698 Score = 331 (49.7 bits), Expect = 3.8e-05, P = 3.8e-05 Identities = 125/186 (67%), Positives = 125/186 (67%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGA-GCTAAAGGAAA-GCCTGATGCAGCAAAAAAGGGAGTTG 2203 AA GAT TG TG A AT GA G T A G AAA G C GATG G AAA A G G TG Sbjct: 671 AATGATGATGATGAAAAT-GACGATGATGAAAATGAC-GATGATGAAAATGACGATGATG 728 Query: 2204 TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 AA G GA A G A GAA A GA G A GA GAGGAAGATGA GA GATGAA A G Sbjct: 729 AAAATGACGATGAT-G-AGGAAGATGACG-ATGATGAGGAAGATGACGATGATGAAAATG 785 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 AT A GA GA A GA ATGA GAA ATGA GATGA GA GAAGATGA GATGATGAA Sbjct: 786 ATAATGATGAAAATGATAATGATGAAAATGATGATGATGAGGAAGATGACGATGATGAAA 845 Query: 2324 AAGTTGGT 2331 A G TG T Sbjct: 846 ATGATGAT 853 Score = 317 (47.6 bits), Expect = 0.00017, P = 0.00017 Identities = 103/144 (71%), Positives = 103/144 (71%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAA-GAAAAAGAAGGAAGAGGA 2240 GATG G A AGG AG TG C A G TGAAAA AA GA AA AA GA A GA Sbjct: 749 GATGACGATGATGAGGAAGATGACGATGATGAAAATGATAATGATGAA-AATGATAATGA 807 Query: 2241 GGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGA 2300 GAA ATGA GA GATGA GA GATGA GA GA GA AA ATGA GA GA GAAGATGA Sbjct: 808 TGAAAATGATGATGATGAGGAAGATGACGATGATGA--AA-ATGATGATGAAGAAGATGA 864 Query: 2301 AGAAGAAGATGATGATGATGAATAA 2325 AG AGAAGATGATGA GATGAATAA Sbjct: 865 AGGAGAAGATGATGACGATGAATAA 889 Score = 314 (47.1 bits), Expect = 0.00024, P = 0.00024 Identities = 126/194 (64%), Positives = 126/194 (64%), Strand = Plus / Plus Query: 2138 TGCTTTGGAAG--GATATTGCTGCATATCGA-GCTAAAGGAAAGCCTGATGCAGCAAAAA 2194 TG T GGAAG GA TG TG A AT GA G T A G AAA TGATG G AAA Sbjct: 631 TGATGAGGAAGATGACGATGATGAAAAT-GACGATGATGAAAATGATGATGATGAAAATG 689 Query: 2195 AGGGAGTTGTCAAGGCTGAAAAAAGCAA-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAA 2253 A G G TG AA G GA A AA GA A GA G AA A GA GA GATGAGGAA Sbjct: 690 ACGATGATGAAAATGACGATGATGAAAATGACGATGATGAAA-ATGACGATGATGAGGAA 748 Query: 2254 GATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGAT 2313 GATGA GA GATGAGGA GA GA GA GATGAA A GAT A GATGAA A GA ATGAT Sbjct: 749 GATGACGATGATGAGGAAGATGACGATGATGAAAATGATAATGATGAAAATGATAATGAT 808 Query: 2314 GATGATGAATAAGTTG 2329 GA ATGA A G TG Sbjct: 809 GAAAATGATGATGATG 824 Score = 312 (46.8 bits), Expect = 0.00030, P = 0.00030 Identities = 106/152 (69%), Positives = 106/152 (69%), Strand = Plus / Plus Query: 2178 GCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AAAAGCAAGAAAAAGAAGGAAG 2236 G CTGAT CA C A AGGGAG G A G TGA AAAA A GA A GA GGAAG Sbjct: 565 GGCTGATTCATCTGAGGAGGGAGAAGAAGATGATGATGAAAATGACGATGATGA-GGAAG 623 Query: 2237 AGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAG 2296 A GA GA GATGAGGAAGATGA GA GATGA A A GA GA GATGAA A GATGA G Sbjct: 624 ATGACGATGATGAGGAAGATGACGATGATGAA-A--ATGACGATGATGAAAATGATGATG 680 Query: 2297 ATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 ATGAA A GA GATGATGA ATGA A G TG Sbjct: 681 ATGAAAATGACGATGATGAAAATGACGATGATG 713 Score = 310 (46.5 bits), Expect = 0.00037, P = 0.00037 Identities = 132/194 (68%), Positives = 132/194 (68%), Strand = Plus / Plus Query: 2147 AGGATATTGCTGCATATCGA-GCTAAAGGAAA-GCCTGATGCAGCAAAAAAGGGAGTTGT 2204 A GAT TG G A AT GA G T A G AAA G C GATG G AAA A G G TG Sbjct: 627 ACGATGATGAGGAAGAT-GACGATGATGAAAATGAC-GATGATGAAAATGATGATGATGA 684 Query: 2205 CAAGG-C--TGAA-AAAA-G-CAA-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATG 2257 AA G C TGA AAAA G C A GA AA AA GA GA GA GAA ATGA GA GATG Sbjct: 685 AAATGACGATGATGAAAATGACGATGATGAA-AATGACGATGATGAAAATGACGATGATG 743 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGA-A--GAAGAAGATGATG 2314 A GA GATGA GA GA GAGGAAGATGA GA GATGAA ATGA A GA GAA ATGAT Sbjct: 744 AGGAAGATGACGATGATGAGGAAGATGACGATGATGAAAATGATAATGATGAAAATGATA 803 Query: 2315 ATGATGAATAAGTTGGT 2331 ATGATGAA A G TG T Sbjct: 804 ATGATGAAAATGATGAT 820 Score = 271 (40.7 bits), Expect = 0.026, P = 0.025 Identities = 119/179 (66%), Positives = 119/179 (66%), Strand = Plus / Plus Query: 2147 AGGATATTGCTGCATATCGA-GCTAAAG-GAAAGCCTGATGCAGCAAAAAAGGGAGTTG- 2203 A GAT TG G A AT GA G T A G G AAG TGA G G AAAA G TG Sbjct: 735 ACGATGATGAGGAAGAT-GACGATGATGAGGAAGA-TGACGATGATGAAAATGATAATGA 792 Query: 2204 TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 T AA TGA AA G A GAAAA GA G A GA GAGGAAGATGA GA GATGAA A G Sbjct: 793 TGAAAA-TGATAAT-G-ATGAAAATGATG-ATGATGAGGAAGATGACGATGATGAAAATG 848 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 ATGA GA GA GA GAAG GAAGA GATGA GATGAA AA A GA A G T AT AAT Sbjct: 849 ATGATGAAGAAGATGAAGGAGAAGATGATGACGATGAATAAAACGA--ACG-TAATAAAT 905 Query: 2324 AA 2325 AA Sbjct: 906 AA 907 Score = 267 (40.1 bits), Expect = 0.039, P = 0.039 Identities = 119/184 (64%), Positives = 119/184 (64%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGA-GCTAAAGGAAA-GCCTGATGCAGCAAAAAAGGGAGTTG 2203 AA GA TG TG A AT GA G T A G AAA G C GATG G AA A G G TG Sbjct: 701 AATGACGATGATGAAAAT-GACGATGATGAAAATGAC-GATGATGAGGAAGATGACGATG 758 Query: 2204 TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 AGG GA A G A GA AA AA GA A GA GAA ATGA A GATGAA A Sbjct: 759 ATGAGGAAGATGAC-G-ATGATGAA-AATGATAATGATGAAAATGATAATGATGAA-A-- 812 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 ATGA GA GA GAGGAAGATGA GA GATGAA ATGA GA GAAGA GATGA G GAA Sbjct: 813 ATGATGATGATGAGGAAGATGACGATGATGAAAATGATGATGAAGAAGATGAAGGAGAAG 872 Query: 2324 AAGTTG 2329 A G TG Sbjct: 873 ATGATG 878 >L21694 Human (clone pHG3) prothymosin alpha gene, complete cds. Length = 330 Plus Strand HSPs: Score = 283 (42.5 bits), Expect = 4.3e-05, P = 4.3e-05 Identities = 121/181 (66%), Positives = 121/181 (66%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAGGA TTG G A A AG AA GGAA AG C G C GC AA GGGA T Sbjct: 60 GAAGGAAGTTGTGGAAGAGGCAGAAAATGGAAGAGAC-GCCCCTGCTAAC--GGGAATGC 116 Query: 2204 TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 T AA G GAAAA G AG A AG GA A GAGG AGATGA GAAGA GAAGA G Sbjct: 117 T-AATGAGGAAAATGGGGAGCAGGAGGCTGACAATGAGGTAGATGAAGAAGAGGAAGAAG 175 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATG---ATGATGATG 2320 TG GGAGGA GAGGA GA GAAGAAG TGA G TGA GAAGA GATG ATGA GATG Sbjct: 176 GTGGGGAGGAAGAGGAGGAGGAAGAAGGTGATGGTGAGGAAGAGGATGGAGATGAAGATG 235 Query: 2321 A--A- 2322 A A Sbjct: 236 AGGAA 240 Score = 226 (33.9 bits), Expect = 0.017, P = 0.017 Identities = 94/138 (68%), Positives = 94/138 (68%), Strand = Plus / Plus Query: 2157 TGCATATCGAGCTAAA-GGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAA 2215 TGC AT GAG AAA GG AGC GA GC G AA AGG AG TG AAG GA Sbjct: 114 TGCTAAT-GAGGAAAATGGGGAGCAGGAGGCTGACAATGAGGTAGATG--AAGAA-GAGG 169 Query: 2216 AAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA-GGAG 2274 AA G AAG GA GGAAGAGGAGGA GA GA G GATG GAGGA GAGGA GGAG Sbjct: 170 AA-G-AAGGTGGGGA-GGAAGAGGAGGAGGAAGAAGGTGATGGTGAGGAAGAGGATGGAG 226 Query: 2275 GAGGAAGATGAAGAAGATGA 2294 A GAAGATGA GAAG TGA Sbjct: 227 -ATGAAGATGAGGAAGCTGA 245 Score = 213 (32.0 bits), Expect = 0.065, P = 0.063 Identities = 119/185 (64%), Positives = 119/185 (64%), Strand = Plus / Plus Query: 2142 TTGGAAGGATATTGCTG-CATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAG 2200 T GG AG A GCTG CA AT GAG TA A GAA G GA G AG AA GGGAG Sbjct: 129 TGGGGAGCAGGAGGCTGACA-AT-GAGGTAGATGAA-GAA-GAGGAAG-AAGGTGGGGAG 183 Query: 2201 TT-GTCAAGGCTGAAAAAAGCAA-GAAAAAGAAGGAAGA-GGAG--GAAGATGAGGAAGA 2255 G AGG GAA AA G A G A GAAG A GA GGAG GAAGATGAGGAAG Sbjct: 184 GAAGAGGAGGAGGAAGAAGGTGATGGTGAGGAAG-AGGATGGAGATGAAGATGAGGAAGC 242 Query: 2256 TGAAGAG-GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG 2314 TGA GA G T GG AG GG AG TGAAGA GATGA GATGA GA G GAT A Sbjct: 243 TGA-GACAGCTACGGGCAAGCGGGCAGCTGAAGATGATGAGGATGACGATGTCGAT-ACC 300 Query: 2315 ATGATGAATAAG 2326 A GA G A AAG Sbjct: 301 AAGAAGCAGAAG 312 Score = 202 (30.3 bits), Expect = 0.21, P = 0.19 Identities = 102/165 (61%), Positives = 102/165 (61%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCA-AGAAAAAG 2229 AAGGA C G G AG AA AAG GT G AGGC GAAAA G A AGA Sbjct: 43 AAGGACTTACAGGAGAAG-AAGGAAGTT-GTGGAAGAGGCAGAAAATGGAAGAGACGCCC 100 Query: 2230 AAGG-AAGAGGAG-GAAGATGAGGAAGATGAAGAGGATGAGGAGGAG---GAGGAAGATG 2284 G AA GGA G ATGAGGAA ATG GAG A GAGG GA GAGG AGATG Sbjct: 101 CTGCTAACGGGAATGCTAATGAGGAAAATGGGGAGCAGGAGGCTGACAATGAGGTAGATG 160 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 AAGAAGA GAAGA G G GA GA GA GA GA GAA AAG TG T Sbjct: 161 AAGAAGAGGAAGAAGGTGGGGAGGAAGAGGAGGAGGAAGAAGGTGAT 207 >Y07738 M.musculus gene for vimentin Length = 9833 Minus Strand HSPs: Score = 337 (50.6 bits), Expect = 4.6e-05, P = 4.6e-05 Identities = 113/163 (69%), Positives = 113/163 (69%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 C T TTC TC TC TC CTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 4773 CCTCTTCTTCTTCTTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 4832 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTT-G-CTTTTTTCAGC 2209 C TC TCTTC TCTTC TC TCTTC TC TCTTC TTCTT TTCTT G CT TCA Sbjct: 4833 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TTCTTCTTCTTCGACTAAGCTCACA 4891 Query: 2208 CTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCT-TTAGCT 2166 A AAC CCT T TT CTG TC CTT C TT GCT Sbjct: 4892 ACCAAAAACAACCTCTATTTCTGATTCCTTCTTGACAGTTTGCT 4935 Score = 335 (50.3 bits), Expect = 5.7e-05, P = 5.7e-05 Identities = 99/128 (77%), Positives = 99/128 (77%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC TC TC TCTTCTTCTTC TCT C TCTTCTTC TCTTC TC TC TC TC TC Sbjct: 4763 TCCTCCTCCTCCTCTTCTTCTTCTTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 4822 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCAGCCTTGA 2204 TCTTC TCTTC TC TCTTC TC TCTTC TTCTT TTCTT CTT TT TTC C T GA Sbjct: 4823 TCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TTCTTCTTCTT-CTTCTTCTTCTTCTTCGA 4880 Query: 2203 C-AA-CTCCC 2196 C AA CTC C Sbjct: 4881 CTAAGCTCAC 4890 Score = 294 (44.1 bits), Expect = 0.0042, P = 0.0042 Identities = 120/176 (68%), Positives = 120/176 (68%), Strand = Minus / Plus Query: 2309 TCTTCTTCTTCATCTTCATCTTC-TTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTC 2251 T TTCTT TC TC TC TC TC TTC TC TCCTCCTCCTCCTC TCCTCTTC TCTTC Sbjct: 4727 TTTTCTTTCTCCTCCTCCTCCTCCTTC-TCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTC 4785 Query: 2250 CTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCAGCCTTGACAACTCCCTTT 2193 TC CTTC TC TCTTC TTCTT TTCTT CTT TT TTC C T C CT C T T Sbjct: 4786 TTCTACTTCTTCTTCTTC-TTCTTCTTCTT-CTTCTTCTTCTTCTTCTTCTTCTTCTTCT 4843 Query: 2192 TTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGC-AATATC-CTTCCAAAG-CAA 2137 T T CT C TC CTT T CTT CT T T C C AA TC C CCAAA CAA Sbjct: 4844 TCTTCTTCTTCTT-CTTCTTCTTCTTCTTCTTCTTCGACTAAGCTCACAACCAAAAACAA 4902 Score = 293 (44.0 bits), Expect = 0.0047, P = 0.0047 Identities = 119/174 (68%), Positives = 119/174 (68%), Strand = Minus / Plus Query: 2309 TCTTCTTCTTCATCTTCATCTTC-TTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTC 2251 T TTCTT TC TC TC TC TC TTC TC TCCTCCTCCTCCTC TCCTCTTC TCTTC Sbjct: 4727 TTTTCTTTCTCCTCCTCCTCCTCCTTC-TCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTC 4785 Query: 2250 CTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCAGCCTTGACAACTCCCTTT 2193 TC CTTC TC TCTTC TTCTT TTCTT CTT TT TTC C T C CT C T T Sbjct: 4786 TTCTACTTCTTCTTCTTC-TTCTTCTTCTT-CTTCTTCTTCTTCTTCTTCTTCTTCTTCT 4843 Query: 2192 TTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGCAATATCCTTCCAAAGCAAA 2136 T T CT C TC CTT T CTT CT T T C G A TA CT CAA CAAA Sbjct: 4844 TCTTCTTCTTCTT-CTTCTTCTTCTTCTTCTTCTTC-G-ACTAAGCTCACAAC-CAAA 4897 Score = 286 (42.9 bits), Expect = 0.0097, P = 0.0097 Identities = 74/95 (77%), Positives = 74/95 (77%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 | |||| ||| || || || ||||||||||| ||||| |||||||| ||||| || || | Sbjct: 4788 CTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 4847 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCT 2235 | || || ||||| ||||| || ||||| || || Sbjct: 4848 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGACT 4882 Score = 272 (40.8 bits), Expect = 0.042, P = 0.041 Identities = 100/139 (71%), Positives = 100/139 (71%), Strand = Minus / Plus Query: 2309 TCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCC 2250 T TTCTT TTC T TTC T TTCTT TCTT CTCCTCCTCCTC TCCT TC TC TCC Sbjct: 4707 TTTTCTT-TTCTT-TTCTT-TTCTTT-TCTTTCTCCTCCTCCTCCTCCTTCTCCTCCTCC 4762 Query: 2249 TCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCAGCCTTGACAACTCCCTTTT 2192 TC TC TCCTCCTCTTC TTCTT TTCT CTT TT TTC C T C CT C T TT Sbjct: 4763 TCCTCCTCCTCCTCTTC-TTCTTCTTCTA-CTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 4820 Query: 2191 TTGCTGCATCAGGCTT-TCCTT 2171 T CT C TC CTT T CTT Sbjct: 4821 CTTCTTCTTCTT-CTTCTTCTT 4841 >Z74581 Human DNA sequence from cosmid E127C11 Length = 38,423 Minus Strand HSPs: Score = 337 (50.6 bits), Expect = 4.8e-05, P = 4.8e-05 Identities = 127/180 (70%), Positives = 127/180 (70%), Strand = Minus / Plus Query: 2351 AAAAAAAAAACTGCGCTAGAACCAACT-TA-TTCATCATCATCATCTTCTTCTTCATCTT 2294 A A AAA A TGC AGAA CT TA TTCA AT CA TT TTCTTC TCTT Sbjct: 2822 AGAGAAATAGATGCATGAGAAATTCCTGTAATTCAAAATAGACAAGTTTTTCTTCCTCTT 2881 Query: 2293 CATCTTC-TTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCT 2235 C TCTTC TTC TC TCCTCCTCCTCCTCATC TCTTC TCTTCCTC TCTTCCTC TC Sbjct: 2882 CCTCTTCCTTC-TCCTCCTCCTCCTCCTCATCTTCTTCCTCTTCCTCCTCTTCCTCTTCC 2940 Query: 2234 TCCTTCTTTTTCTTGCTTTTTTCAGCCTTGA-CAACTCCCTTTTTTGCTGCATCAGGCTT 2176 CCTTC T CTT CT TT C CCTT C CTCC T TT T CT C TC CTT Sbjct: 2941 -CCTTCCCCTCCTT-CTCCTT-CT-CCTTCTTCTTCTCCTTCTTCTTCTCCTTCTC-CTT 2995 Query: 2175 -TCCT 2172 TCCT Sbjct: 2996 CTCCT 3000 Score = 284 (42.6 bits), Expect = 0.012, P = 0.012 Identities = 96/133 (72%), Positives = 96/133 (72%), Strand = Minus / Plus Query: 2297 TCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCC 2238 T TTC TC TCTTC TCTTCCT CTCCTCCTC TCCTC TCATCTTC TC TCTTCCTCC Sbjct: 2869 TTTTCTTCCTCTTCCTCTTCCTTCTCCTCCTCCTCCTCCTCATCTTCTTCCTCTTCCTCC 2928 Query: 2237 TCTTCCTTCTTTTTCTTGCTTTT-TTCAGCCTTGACAA-CTCCCTTTTTTGCTGCATCAG 2180 TCTTCCT CTT CTT C T TTC CCTT C CT C T T T CT C TC Sbjct: 2929 TCTTCCT-CTTCCCCTTCCCCTCCTTCT-CCTTCTCCTTCTTCTTCTCCTTCTTCTTCTC 2986 Query: 2179 GCTT-TCCTTTAGCTC 2165 CTT TCCTT CTC Sbjct: 2987 -CTTCTCCTTCTCCTC 3001 Score = 264 (39.6 bits), Expect = 0.10, P = 0.097 Identities = 102/150 (68%), Positives = 102/150 (68%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCC 2271 CC CTT T C TC C TC TCTTCT CTTC TCTTC CTTCT C TCT CCTCCTCC Sbjct: 2947 CCTCCTTCTCCTTCTCCTTCTTCTTCTCCTTCTTCTTCTCCTTCTCCTTCT-CCTCCTCC 3005 Query: 2270 TCCTCATCCT-CTTCATCTTC-CTCATCTTCCTC-CTCTTCCTTCTTTTTCTTGCTTTTT 2214 TCCTC T CT CTTC TCTT CTC TCT CTC CT T CCTTCTTT T G T T Sbjct: 3006 TCCTCCTTCTTCTTCTTCTTTTCTC-TCTCTCTCTCTTTCCCTTCTTTGTGG-GTGTCCT 3063 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCA 2181 G GA ACTC TT TTTG TG AT A Sbjct: 3064 GGGGAAAAGAGTACTCTTTTATTTGGTG-ATGA 3095 >AC002539 Homo sapiens chromosome 17, clone 195o20, complete sequence. Length = 87,246 Plus Strand HSPs: Score = 300 (45.0 bits), Expect = 0.012, Sum P(2) = 0.011 Identities = 118/165 (71%), Positives = 118/165 (71%), Strand = Plus / Plus Query: 2155 GCTGCATATCGAGCTAAAGGAAAGCCTGA-TGCAGCAAAAAAGGGAGTTGTCAAGGCTGA 2213 GCTG A ATCG G T A G A CC G TG GCAA A AG GAG T A CT A Sbjct: 35720 GCTG-AGATCGTG-TCACTGCACTCCAGCCTGG-GCAACAGAGTGAGAC-T-ACCTCTCA 35774 Query: 2214 AAA-AAGCAAGAAAAAGA--AGGA--AG-AGGAGGAAGATGAGGAAGATGAAGAGGATGA 2267 AAA AAG AAGAA AAGA AGGA AG AGGAGGA GA G GGA G GA GAGGA GA Sbjct: 35775 AAAGAAG-AAGAAGAAGAGGAGGAGCAGGAGGAGGAGGAGGGGGAGGGGGAGGAGGAGGA 35833 Query: 2268 GGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGA 2318 GAGGAGGAGGA GA GA GAAGA GAAGA AAGA GAAGA GA GA GA Sbjct: 35834 AGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGAAAGAGGAAGAGGAAGAAGA 35884 Score = 299 (44.9 bits), Expect = 0.013, Sum P(2) = 0.013 Identities = 81/106 (76%), Positives = 81/106 (76%), Strand = Plus / Plus Query: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280 AAGAA AAGAAG AAGAGGAGGA A GAGGA GA GA G GGA G GGAGGAGGAGGAA Sbjct: 35776 AAGAAGAAGAAG-AAGAGGAGGAGCAGGAGGAGGAGGAGGGGGAGGGGGAGGAGGAGGAA 35834 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GA GA GA GA GA GAAGA GAAGA A GA GA GA AAG Sbjct: 35835 GAGGAGGAGGAGGAGGAGGAAGAGGAAGAGAAAGAGGAAGAGGAAG 35880 Score = 281 (42.2 bits), Expect = 0.076, Sum P(2) = 0.073 Identities = 81/105 (77%), Positives = 81/105 (77%), Strand = Plus / Plus Query: 2212 GAAAAA-AGCAAGAAAAAGA--AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAG 2268 GAA AA AG A GA A GA AGGA GAGG GGA G GAGGA GA GAAGAGGA GAG Sbjct: 35784 GAAGAAGAGGAGGAGCAGGAGGAGGAGGAGGGGGAGGGGGAGGAGGAGGAAGAGGAGGAG 35843 Query: 2269 GAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG 2314 GAGGAGGAGGAAGA GAAGA A GA GA GA GAAGAAGA GATG Sbjct: 35844 GAGGAGGAGGAAGAGGAAGAGAAAGAGGAAGAGGAAGAAGA-GATG 35888 Score = 148 (22.2 bits), Expect = 0.012, Sum P(2) = 0.011 Identities = 350/618 (56%), Positives = 350/618 (56%), Strand = Plus / Plus Query: 1454 AGTACAAA-AACAGGCT--AGACAAAGTAATATAGGCTATATTTTTCTTAGTCATATCCT 1510 A TA AAA AA A GCT AGA AAAG AA A A C ATT T T TC T TC T Sbjct: 6391 AATAAAAATAAAATGCTTCAGAAAAAGAAA-ACACCCAGCATTAATAGT--TC-T-TC-T 6444 Query: 1511 GAAACATTTATGTTCTTTTCCTTTAGAT-ACT--CAA-A-AAACCA--CAGCATCACTAA 1563 GAAACATTT T T TTTTCC T AG T ACT CAA A AAAC A CAG AT C AA Sbjct: 6445 GAAACATTTTTAATTTTTTCCATCAGGTTACTTCCAAGAGAAACTATTCAGGATTTCCAA 6504 Query: 1564 GTTAAATTACAAGTCT-GCT-GCTCTGTCCAGTAAATTAATAAGATTAAGGAAATCTATA 1621 GT AA A AA TC GCT G T GTCC TA T A A TT AGGAAA CTA Sbjct: 6505 GT-AACGAAGAA-TCAAGCTAGGTAAGTCC--TAC-TCACGGAATTTCAGGAAAACTACC 6559 Query: 1622 ACTCTTA-TAGTTCAGTAAATTGAAATATTAAATACTTAATTTTCAGCTTTAGTCATTCT 1680 A A TA AGT T AAAT T AAA C AA TTT C A A TCT Sbjct: 6560 AGAGGGAATAAAA-AGTGCTCTTAAATTTCAAAGGCACAAGTTTTTCCCC-ACCAACTCT 6617 Query: 1681 -GAAAAGTGTTT-AT-TTCTAGATGTTTCTTAACCTAATTGCATGTTT-ATT-GA-CAAA 1734 G A A TG T A TT TA A T A C AAT G ATG T A GA CA A Sbjct: 6618 AGCACATTGCATGACCTTATA-ACCAAGGTCATGCAAATAG-ATGGTCCACCAGAACAGA 6675 Query: 1735 TTACCTTTTTTTTTTAAGACCACATTTCCTA-CTAAGGATTAAGGTCTGACAGTGTAAAC 1793 TTA C T T A G C A TTTC TA CT AT A TCT G AA C Sbjct: 6676 TTATCACAGTGGCT-ATG-CAATGTTTC-TAGCTTTTTATGACAATCTTG--GCCAAAGC 6730 Query: 1794 CTG-TAGAGTGCTTTTTTGCATTC-AGAAG-GTGGCAGTGTCTACCCTTTAATCAAAGTC 1850 G TAGA GC T A C AGAA GT GCA TG CTA TT AATCA A TC Sbjct: 6731 AGGCTAGATGGCAATAAGAAAGACTAGAATTGTTGCA-TGGCTAATTTTCAATCATA-TC 6788 Query: 1851 TCTACATTCTGGTTTTAATA-GAGTTAGGATCTGGT-AGATAATTGCACCTCAATGAGGC 1908 C A A TCT TTTAA A G A ATC AG AATT C T A Sbjct: 6789 -C-AGACTCTTACTTTAACAAGCACAAATATCCACACAGTAAATTATCCATTTCACATTT 6846 Query: 1909 ATAACTTTGCAAATA-TTAGACT-ATGCCATTTC--ATGAGTTATAGA-TTGTTATAATG 1963 ATA TT CA ATA TTA A AT TTT A GAG A A A TT T T TG Sbjct: 6847 ATATTCTT-CAGATAATTAAAGGCATTATTTTTATAAAGAGAAAAAAAGTTCCTCTT-TG 6904 Query: 1964 ATCTTGTATTTTTATGTTCATTTATTGAAGTTCTAGTTATTTCT-GGAGTTGCTGTGGAT 2022 ATC T TATT T A G TCA T TTG T AG A T GGA TGC T AT Sbjct: 6905 ATCCTCTATTATAA-GCTCAAATGTTGGGAATA-AGCAAGAAATTGGAAATGCC-T--AT 6959 Query: 2023 CTACAGATACGTGAT-ATTTTGGTATAACTAGAATCTTGATTTCTTTCAT 2071 T CA ATA GTGAT A TT T TA CTA AA CT TTT T TC T Sbjct: 6960 -TCCA-ATAAGTGATGAAATTCTT-TATCTAAAA-CTGCCTTTGTATCCT 7005 Minus Strand HSPs: Score = 337 (50.6 bits), Expect = 4.8e-05, P = 4.8e-05 Identities = 101/133 (75%), Positives = 101/133 (75%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TC TCCTCC CCTCC Sbjct: 34461 CTTCTTCTTC-TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCCCCTCCC 34519 Query: 2266 CATCCTCTTCATCT-TCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCC 2208 C TCC C TC CT TCCTC TC T CTCCTC TC TTCTT TTCTT CTT TT C CC Sbjct: 34520 CCTCCCCCTCCCCTCTCCTCCTCCTTCTCCTCCTC-TTCTTCTTCTT-CTTATT-CTTCC 34576 Query: 2207 TTGACAACTCCCTT 2194 TT C C CCCTT Sbjct: 34577 TTCTCCTC-CCCTT 34589 Score = 265 (39.8 bits), Expect = 0.092, P = 0.088 Identities = 79/106 (74%), Positives = 79/106 (74%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTC-TTCATCTTCC-TCCTCCTC 2269 CT T C TC TC TC TCTTCTTCTTC TCTT TCTTC TTC CT CC T C CCTC Sbjct: 34537 CTCCTCCTTC-TCCTCCTCTTCTTCTTCTTCTTATTCTTCCTTCTCCTCCCCTTCCCCTC 34595 Query: 2268 CTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCT 2222 C C TCCTCTTC TCTTC TC TCTTCCT CTC TCCT CT T CT Sbjct: 34596 CCCCTCCTCTTCTTCTTCTTCTTCTTCCTTCTCCTCCTCCTCCTCCT 34642 Score = 234 (35.1 bits), Expect = 2.4, P = 0.91 Identities = 66/83 (79%), Positives = 66/83 (79%), Strand = Minus / Plus Query: 2314 CATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCAT 2255 C TC C TC TCTTC TCTTC TCTTCTTC T TCCTCCTCCTCCTC TCCTC TC T Sbjct: 34592 CCTCCCCCTCCTCTTCTTCTTCTTCTTCTTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCT 34651 Query: 2254 CTTCCTCATCTTCCTCCT-CTTCC 2232 CTT CTC CTTC TCCT CTTCC Sbjct: 34652 CTTTCTC--CTTC-TCCTTCTTCC 34672 Score = 230 (34.5 bits), Expect = 3.6, P = 0.97 Identities = 64/81 (79%), Positives = 64/81 (79%), Strand = Minus / Plus Query: 2320 CATCATCATCATCTTCTTCTTCATCTTCATC-TTCTTCATCTTCCTCCTCCTCCTCATCC 2262 C TC C TC TCTTCTTCTTC TCTTC TC TTCT C TC TCCTCCTCCTCCTC TCC Sbjct: 34592 CCTCCCCCTCCTCTTCTTCTTCTTCTTCTTCCTTCTCC-TCCTCCTCCTCCTCCTCCTCC 34650 Query: 2261 TCTTCATCTTCCTCAT-CTTCC 2241 TCTT TC T CTC T CTTCC Sbjct: 34651 TCTTTCTCCTTCTCCTTCTTCC 34672 >X07699 Mouse nucleolin gene Length = 11,478 Plus Strand HSPs: Score = 336 (50.4 bits), Expect = 5.1e-05, P = 5.1e-05 Identities = 210/341 (61%), Positives = 210/341 (61%), Strand = Plus / Plus Query: 1981 TCATTTATTGAAGTTCT-AGTTATTTCTGGAG-TTGCTGTGGATCT-ACA-GATACGTGA 2036 TCATTT T G G TCT AGTT TTTC A TT T GG T T A G TA GT Sbjct: 4362 TCATTT-T-GT-GCTCTTAGTTCTTTCCATAACTTAATA-GGTTTTCATTTGCTAAGTAG 4417 Query: 2037 TATTTTGGTATAACTA-GAATCTTGATTTCTTTCATAAAGTTCTGCCATGTTCTATTTCT 2095 T TTTTG T T TA G AT TTG T C TT AT GT CTG AT T TA T Sbjct: 4418 T-TTTTGTTTTTTTTAAGTAT-TTG-TAGCATTTATCTTGT-CTGG-AT-TGGTAGGTAG 4471 Query: 2096 TTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGGATATTG 2155 T AT T T TT CC CT TT T TCC CT TG GAAG TAT G Sbjct: 4472 CAAATACATTTGCCTGATTTGCCATCT-TTCT-TCCAGACTCTGAGGAAGAAGT-TATGG 4528 Query: 2156 CTG-CATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA 2214 CA A C AGC AAAGGAAAG T C GCAAAA G T T AA GC A Sbjct: 4529 AGATCACAAC-AGCCAAAGGAAAGAAAACTCCTGCAAAAGTTGTTCCTATGAAAGCCAAG 4587 Query: 2215 AAAA-GCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGA 2273 A G GA A GA GGA GA GAGGAAGA GA GAAGATGA GAGGATGAGGA GA Sbjct: 4588 AGTGTGGCTGAGGAGGA-GGATGATGAGGAAGAGGATGAAGATGACGAGGATGAGGATGA 4646 Query: 2274 GGAGGAAGATGA--A-GAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GAGGAAGA GA A GAAGATGA GATGA GAAGAAGA GA GA G T A Sbjct: 4647 TGAGGAAGAGGATGACGAAGATGATGATGAGGAAGAAGAGGAGGAAGGTAA 4697 Score = 309 (46.4 bits), Expect = 0.00088, P = 0.00088 Identities = 87/117 (74%), Positives = 87/117 (74%), Strand = Plus / Plus Query: 2216 AAAGC-AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AAAGC AAGA G GA GAGGAGGA GATGAGGAAGA GA GA GATGA GAGGA Sbjct: 4579 AAAGCCAAGAGTGTGGCTGAGGAGGAGGATGATGAGGAAGAGGATGAAGATGACGAGGAT 4638 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 GAGGA GATGA GAAGA GA GA GAAGA GA GATGA GA GA GA A G GGT Sbjct: 4639 GAGGATGATGAGGAAGAGGATGACGAAGATGATGATGAGGAAGAAGAGGAGGAAGGT 4695 Score = 284 (42.6 bits), Expect = 0.012, P = 0.012 Identities = 76/100 (76%), Positives = 76/100 (76%), Strand = Plus / Plus Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 |||| | | ||||| || || || || ||||||||||| || || ||||| || || Sbjct: 4585 AAGAGTGTGGCTGAGGAGGAGGATGATGAGGAAGAGGATGAAGATGACGAGGATGAGGAT 4644 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 || || ||||| || || |||||||||||||| ||| ||| Sbjct: 4645 GATGAGGAAGAGGATGACGAAGATGATGATGAGGAAGAAG 4684 Score = 260 (39.0 bits), Expect = 0.15, P = 0.14 Identities = 184/311 (59%), Positives = 184/311 (59%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAG 2223 GAG A AGGA AG TGA CA CAA A AG GT AAG C G AAAA GCA G Sbjct: 4151 GAGGAAGAGGATGAGTTTGAGCCACCAATAGTAAAAGGAGTGAAGCCAGCAAAA-GCA-G 4208 Query: 2224 AAAAAGAAGGAAGAGGAGGA-AG-ATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 G G G A AG ATGAGGAAGATGA GAGGATGA GA GA GAGGAAG Sbjct: 4209 CTCCTGCTGCTCCTGCCTCAGAGGATGAGGAAGATGATGAGGATGAAGATGATGAGGAAG 4268 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGAT-GATGAT-GAATAAGTTGGTTCTAGCGC 2339 ATGA GA GA GA GA GAAGA G GA G T GAT T G ATA T GG T A GC Sbjct: 4269 ATGATGATGAAGAGGAGGAAGATGGTGA-GTTAGATCTTAGGATATTTAGGGT--ACTGC 4325 Query: 2340 A-GTTTTTTTTTTCT-TGTCT-ATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTT 2396 A GT TT TC TGT T AT A G ATT AA C C T T CT A T CTT Sbjct: 4326 ATGTACATTCCCTCACTGTTTCATTA-G-ATTAAAAACTCATTTTGTGCTCTTAGTTCTT 4383 Query: 2397 TTAAAGAAAAAAATTGAAATGTAAG-GCTGTGTAAGATTTGTTTTTAAACTGTACA-GTG 2454 T A AA AAT G T A GCT GTA TTTGTTTTT GTA GT Sbjct: 4384 TCCAT-AACTTAATAGGTTTTCATTTGCTAAGTAGTTTTTGTTTTTTTTAAGTATTTGTA 4442 Query: 2455 TCTTTT-T-TTGTATAGTT 2471 C TTT T TTGT T G T Sbjct: 4443 GCATTTATCTTGTCTGGAT 4461 Score = 253 (38.0 bits), Expect = 0.31, P = 0.27 Identities = 83/111 (74%), Positives = 83/111 (74%), Strand = Plus / Plus Query: 2208 GGCTGAAAAAAGCAAGAAA---AAGAAGGAAGAGGAG-GAAGATGAGGAAGATGAAGAGG 2263 GGCT A AA G AAGAA AAGAAGGAAGA AG GA GA GA GAAGATGAAGAGG Sbjct: 4060 GGCTAAGAACGGTAAGAATGCCAAGAAGGAAGAC-AGTGATGAGGATGAAGATGAAGAGG 4118 Query: 2264 ATGAGGAGGAGGAG-GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 ATGA GA GA AG GA GA GA GAAGATGA GA GAAGA GA GA TGA Sbjct: 4119 ATGAAGATGAT-AGCGATGAGGATGAAGATGATGAGGAAGAGGATGAGTTTGA 4170 Score = 241 (36.2 bits), Expect = 1.1, P = 0.67 Identities = 99/147 (67%), Positives = 99/147 (67%), Strand = Plus / Plus Query: 2191 AAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAG 2250 AAAAAGGGAG TG CA C G AA G AA AA G AAGA AAGA AG Sbjct: 4031 AAAAAGGGAGCTGCCACTCCAGCTAAGGGGGCTAAGAACG-GTAAGAATGCCAAGA--AG 4087 Query: 2251 GAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGA-AGATGAAGAAGAAGA 2309 GAAGA A G G ATGAGGA GA GA GAAGA GA GAAGATGA AG GA GA GA GA Sbjct: 4088 GAAGAC-A-GTG-ATGAGGATGAAGATGAAGAGGATGAAGATGATAGC-GATGAGGATGA 4143 Query: 2310 TGATGATGATGAATAAGTTG-GTTCTAGC 2337 GATGATGA GAA A G TG GTT AGC Sbjct: 4144 AGATGATGAGGAAGAGGATGAGTTTGAGC 4172 >Y07569 H.sapiens mRNA for PHAPI2a protein Length = 1011 Plus Strand HSPs: Score = 328 (49.2 bits), Expect = 5.5e-05, P = 5.5e-05 Identities = 94/125 (75%), Positives = 94/125 (75%), Strand = Plus / Plus Query: 2207 AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATG 2266 AGG GAA AA G AGAA A GA GGAAGA GAGGA GATGAGGA G TGAAGA GA G Sbjct: 564 AGGACGAAGAAGG--AGAAGATGA-GGAAGACGAGGACGATGAGGATGGTGAAGAAGAGG 620 Query: 2267 AGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AG GA GA GAAGATGA GAAGATGAAGATG AGAAG GATGA GA GA GA AAG Sbjct: 621 AGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGGGATGAGGACGACGATGAAG 680 Query: 2327 TTGGT 2331 T GT Sbjct: 681 TCAGT 685 Score = 313 (47.0 bits), Expect = 0.00028, P = 0.00028 Identities = 83/107 (77%), Positives = 83/107 (77%), Strand = Plus / Plus Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GA AAGA GGA GAGGA GAAGA G GAAGATGA GA GA GAGGA GA GAGGA G Sbjct: 551 GATGAAGA-GGAGGAGGACGAAGAAGGAGAAGATGAGGAAGACGAGGACGATGAGGATGG 609 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 TGAAGAAGA GA TGA GAAGAAGATGATGA GATGAA A GT G Sbjct: 610 TGAAGAAGAGGAGTTTGATGAAGAAGATGATGAAGATGAAGATGTAG 656 Score = 286 (42.9 bits), Expect = 0.0052, P = 0.0052 Identities = 110/155 (70%), Positives = 110/155 (70%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTT-G-TCAAG--GCTGAAAAA-AGCAAGAAAAAGAAGGAAG 2236 GATG G A AA AGG AGTT G T AAG G TGA AA A AAGA AGAAGG G Sbjct: 605 GATGGTGAAGAAGAGG-AGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGG-G 662 Query: 2237 AGGAGGAAGATGAGGAAGATGAA-GAGGATGAGGAGGAGGA-GGAA--GATGAAGAAGAT 2292 A GAGGA GA GA GAAG T A GAGGA GA GA GA GGA GATGAAGAAGAT Sbjct: 663 ATGAGGACGACGATGAAG-TCAGTGAGGAGGAAGAAGAATTTGGACTTGATGAAGAAGAT 721 Query: 2293 GAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 GAAGATGA GA GA GATGA GA GA GAA AAG TGG Sbjct: 722 GAAGATGAGGATGAGGATGAAGAGGAGGAAGAAGGTGG 759 Score = 277 (41.6 bits), Expect = 0.014, P = 0.014 Identities = 103/151 (68%), Positives = 103/151 (68%), Strand = Plus / Plus Query: 2172 AGGAAAG-CCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 AGGAA CCTGA CAG AGG G TG GG TGAA A G A GA A GA Sbjct: 513 AGGAAGCACCTGACTCAGATGCCGAGGTGGATGGTGTGGATGAAGAG-G-AGGAGGACGA 570 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 AG AAG GAG AAGATGAGGAAGA GA GA GATGAGGA G GA GAAGA GA G Sbjct: 571 AG-AAG--GAG-AAGATGAGGAAGACGAGGACGATGAGGATGGTGAAGAAGAGGAGTTTG 626 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 ATGAAGA GA GA GAAGATGA GATG GAA Sbjct: 627 ATGAAGAAGATGATGAAGATGAAGATGTAGAA 658 Score = 263 (39.5 bits), Expect = 0.063, P = 0.061 Identities = 119/184 (64%), Positives = 119/184 (64%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAG-CAAAAAAGGGAGTTG 2203 GAAG A AT G TG A AT AG T AG A G TGA G G C A AAG AGT G Sbjct: 629 GAAGAAGAT-GATGAAGATGAAGATGTAGAAGGGGATGAGGACGACGATGAAGTCAGT-G 686 Query: 2204 TCAAGGCTGAAAAAAGCA-AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 AGG GAA AA A A GAAG AAGA GA GA GA GA GA GATGAAGAG Sbjct: 687 AGGAGGAAGAAGAATTTGGACTTGATGAAG-AAGATGAAGATGAGGATGAGGATGAAGAG 745 Query: 2263 GATGAGGA-GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GA GA GA GG GG G AAG TGAA AAGA GAAGA GA GAA AGATGATGA G GA Sbjct: 746 GAGGAAGAAGGTGG-GAAAGGTGAA-AAGAGGAAGA-GA-GAAACAGATGATGAAGGAGA 801 Query: 2322 ATAAGTT 2328 A A G T Sbjct: 802 AGATGAT 808 Score = 251 (37.7 bits), Expect = 0.23, P = 0.20 Identities = 97/150 (64%), Positives = 97/150 (64%), Strand = Plus / Plus Query: 2181 TGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGG 2239 TG TG G AA AGG G G C AAG GA AA A A GAA A GA GGA GA G Sbjct: 544 TGGTGTGGATGAAGAGGAGGAGGACGAAGAAGGAGAAGATGAGGAAGACGA-GGACGATG 602 Query: 2240 AGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATG 2299 AGGA G TGA GAAGA GA GATGA GA GA GA GAAGATGAAGA G GAAG G Sbjct: 603 AGGATGGTGAAGAAGAGGAGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGGG 662 Query: 2300 AAGAAGAAGATGATGATGATGAATAAGTTGG 2330 A GA GA GA GATGA G T A T AG GG Sbjct: 663 ATGAGGACGACGATGAAG-TCAGTGAGGAGG 692 Score = 244 (36.6 bits), Expect = 0.49, P = 0.39 Identities = 70/95 (73%), Positives = 70/95 (73%), Strand = Plus / Plus Query: 2239 GAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGAT 2298 GA G GA G GGA G TG GA GA GAGGAGGAGGA GAAGA G AGAAGATGA GA Sbjct: 530 GATGCCGAGGTGGATGGTGTGGATGAAGAGGAGGAGGACGAAGAAGGAGAAGATGAGGAA 589 Query: 2299 GAAGAAGAAGATGATGATGATGAATAAGTTG-GTT 2332 GA GA GA GATGA GATG TGAA AAG G GTT Sbjct: 590 GACGAGGACGATGAGGATGGTGAAGAAGAGGAGTT 624 Score = 238 (35.7 bits), Expect = 0.93, P = 0.60 Identities = 94/141 (66%), Positives = 94/141 (66%), Strand = Plus / Plus Query: 2191 AAAAAGGGA-GTTGTCAAGGCTGAAAAAAGCAAGAAA-AAGAAGGAAGAGGAGGAAGATG 2248 A AA GGGA G G C A G TGAA AG AG A AAGAAG A GGA GATG Sbjct: 655 AGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGAGGAAGAAGAATTTGGACTT-GATG 713 Query: 2249 AGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAG 2308 A GAAGATGAAGA GA GA GAGGA GA GA GA GAAGAAG TG A G GAA AAG Sbjct: 714 AAGAAGATGAAGATGAGGATGAGGATGAAGAGGAGGAAGAAGGTGGGAAAGGTGAA-AAG 772 Query: 2309 ATGATGATGATGAATAAGTTGGT 2331 A GA GA GA GAA AG TG T Sbjct: 773 AGGAAGA-GA-GAAACAGATGAT 793 Score = 226 (33.9 bits), Expect = 3.4, P = 0.97 Identities = 100/148 (67%), Positives = 100/148 (67%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTTG-TCAAG--GCTGAAAAA-AGCAAGAAAAAGAAGGAAGA 2237 GA G AG A AA GGA TTG T AAG G TGAA A AG A GA A GAAG A GA Sbjct: 689 GAGGAAGAAGAATTTGGACTTGATGAAGAAGATGAAGATGAGGATGAGGATGAAG-AGGA 747 Query: 2238 GGAGGAAGATGAGGAAGATGAA--GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAA 2295 GGA GAAG TG G AAG TGAA GAGGA GAG AG A AG A GATGAAG AGA GA Sbjct: 748 GGAAGAAGGTGGGAAAGGTGAAAAGAGGAAGAG-AGAAACAG-ATGATGAAGGAGAAGAT 805 Query: 2296 GATGAAGAAGA-AGATGATGATGATGAATAAG 2326 GAT AAGA AGATGA TG GAA AG Sbjct: 806 GATTAAGACCCCAGATGACC-TGCAGAAACAG 836 >U31600 Heliocidaris erythrogramma HEHBOX10 (HeHbox10) gene, partial cds. Length = 1318 Minus Strand HSPs: Score = 330 (49.5 bits), Expect = 5.7e-05, P = 5.7e-05 Identities = 132/190 (69%), Positives = 132/190 (69%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTC-ATCTTCCTCCTCCTCC 2268 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC AT TTC TC TC T Sbjct: 1053 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAT-TTCTTCTTCTTTT 1111 Query: 2267 TCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCAG 2210 TC TC TCTT TCTT TC TCTTC TC TCTTC T C T TTCTT CTT TT TTC G Sbjct: 1112 TCTTCTTCTTTTTCTTTTTCTTCTTCTTCTTCTTCAT-CGTCTTCTT-CTTATTCTTCTG 1169 Query: 2209 CCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCT-C-GA-TATGCA-GCA 2154 C T C CT C TTTTTT CT C TC CT T CTT CT C GA T TG A G A Sbjct: 1170 CTTCTTCTTCTTC-TTTTTT-CTTCTTCCTCCTCTTCTTCTTCTTCAGAGTGTGAATGTA 1227 Query: 2153 ATATCCTTCCA-AAG 2140 A A CTT A AAG Sbjct: 1228 ACAAACTTTTATAAG 1242 Score = 327 (49.1 bits), Expect = 7.9e-05, P = 7.9e-05 Identities = 137/205 (66%), Positives = 137/205 (66%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCAT-CATCTT-CTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTC 2269 CTT T TC TC T C TCTT CTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC Sbjct: 1027 CTTCTATTTCTTCTTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 1086 Query: 2268 CTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCA 2211 TC TC TCT TCTTC TC T TTC TC TCTT TTCTTTTTCTT CTT TT TTC Sbjct: 1087 TTCTTCTTCTATTTCTTCTTCTTTTTCTTCTTCTTT-TTCTTTTTCTT-CTTCTTCTTCT 1144 Query: 2210 GCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGCAGCAAT 2152 C T G C CT C T TT T CTGC TC CTT T CTTT TC T T C C T Sbjct: 1145 TCATCGTCTTCTTCTTATTCTTCTGCTTCTT-CTTCTTCTTTTT-TCT-TCTTCCTCC-T 1200 Query: 2151 ATCCTTCCAAAGCAAAGGGAGGATAAAACA 2122 T CTTC CA AG G G AT AACA Sbjct: 1201 CTTCTTCTTCTTCAGAGTGTGAATGTAACA 1230 Score = 317 (47.6 bits), Expect = 0.00023, P = 0.00023 Identities = 147/216 (68%), Positives = 147/216 (68%), Strand = Minus / Plus Query: 2355 CAAGAAAAAAAAAACTGCGC-TAGAACCAACTTATTC-A-TCATCA-TCATCTTCTTCTT 2300 CAA AA AA AAACT C TA AA C CTT TTC A T AT TC TCTTCTTCTT Sbjct: 967 CAA-AATAAGGAAACTTTTCATA-AATCTCCTTTTTCCAGTGATTTGTC-TCTTCTTCTT 1023 Query: 2299 CATCTTC-ATCTTCTTCAT-CTTCCTCCTCCTCCT-CATCCTCTTCATCTTCCTCATCTT 2243 C TCTTC AT TTCTTC T CTTC T CT CT CT C TC TCTTC TCTTC TC TCTT Sbjct: 1024 CCTCTTCTAT-TTCTTCTTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 1082 Query: 2242 CCTCCTCTTCCT-TCTTT-TTCTTGCTTTT-TTCAGCCTTGACAACTCCCTTTTTTGCTG 2186 C TC TCTTC T T TTT TTCTT TTTT TTC C TT C T C T TT T CT Sbjct: 1083 CTTCTTCTTCTTCTATTTCTTCTTCTTTTTCTTCTTCTTTTTCTTTTTCTTCTTCTTCTT 1142 Query: 2185 CATCAGGCT-TTCCT-TTAGCTCGATATGCAGCAATATCCTTC 2145 C TCA T TTC T TTA TC T TGC C T T CTTC Sbjct: 1143 CTTCATCGTCTTCTTCTTAT-TCT-TCTGCTTCT-TCTTCTTC 1182 >A21622 Dictoselium plasmid Ddp2 REp gene Length = 5852 Plus Strand HSPs: Score = 268 (40.2 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05 Identities = 68/86 (79%), Positives = 68/86 (79%), Strand = Plus / Plus Query: 2251 GAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGAT 2310 ||||||||||| || || || || || || || || ||||||||||||||||| |||||| Sbjct: 4955 GAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAT 5014 Query: 2311 GATGATGATGAATAAGTTGGTTCTAG 2336 || ||||| || ||| ||| | | | Sbjct: 5015 GAAGATGAAGACGAAGATGGGTATTG 5040 Score = 264 (39.6 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05 Identities = 72/93 (77%), Positives = 72/93 (77%), Strand = Plus / Plus Query: 2233 GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGAT 2292 GAAGA GA GA GA GA GAAGATGAAGA GA GA GA GA GA GA GA GA GAAGAT Sbjct: 4955 GAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAT 5014 Query: 2293 GAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GAAGATGAAGA GAAGATG AT TGAAT A Sbjct: 5015 GAAGATGAAGACGAAGATGGGTAT--TGAATTA 5045 Score = 255 (38.3 bits), Expect = 0.00023, Sum P(2) = 0.00023 Identities = 63/78 (80%), Positives = 63/78 (80%), Strand = Plus / Plus Query: 2244 AGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGA 2303 ||| || ||||||||||| || || || || || || || || ||||||||||||||||| Sbjct: 4954 AGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGA 5013 Query: 2304 AGAAGATGATGATGATGA 2321 |||||||| || || || Sbjct: 5014 TGAAGATGAAGACGAAGA 5031 Score = 254 (38.1 bits), Expect = 0.00026, Sum P(2) = 0.00026 Identities = 72/97 (74%), Positives = 72/97 (74%), Strand = Plus / Plus Query: 2232 GGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGA 2291 GGA AG AG A GA GA GAAGATGAAGA GA GA GA GA GA GA GA GA GAAGA Sbjct: 4949 GGACTAGAAG-ATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGA 5007 Query: 2292 TGAAGATGAAGAAGAAGATGATGATGATGAATAAGTT 2328 TGAAGATGAAGA GAAGA GA GATG A T A TT Sbjct: 5008 TGAAGATGAAGATGAAGACGAAGATGGGTATTGAATT 5044 Score = 233 (35.0 bits), Expect = 0.0022, Sum P(2) = 0.0022 Identities = 71/96 (73%), Positives = 71/96 (73%), Strand = Plus / Plus Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AAGA G AAGA GA GA GA GA GAAGATGAAGA GA GA GA GA GA GA GA G Sbjct: 4954 AGAAGATG-AAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAG 5012 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGAT-GA-TGATGAT 2319 A GAAGATGAAGA GAAGA G AT GA T AT AT Sbjct: 5013 ATGAAGATGAAGACGAAGATGGGTATTGAATTATCAT 5049 Score = 207 (31.1 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05 Identities = 255/455 (56%), Positives = 255/455 (56%), Strand = Plus / Plus Query: 1543 AAAAAACCACAGCATCACTA--AGTTAAATTACAAGTCT--GCTGCTCTGTCCAGTAAAT 1598 AAAAA CC CA AT A TA A TTA TT T T G T T T T A TAAAT Sbjct: 2038 AAAAACCCTCATTATAAATATTAATTACTTTGGTTTTTTTTGATTTTTTTTTTAATAAAT 2097 Query: 1599 TAATAAGATTAAGGAA-ATCTA-TAACTCTTATAGTTCAGTAA-ATTGAAATATTAAAT- 1654 T A AA TTA ATCTA T A C T TA TT A AA ATTG AATA TA AT Sbjct: 2098 TTAAAATTTTATTCTCTATCTAATTATACCT-TATTT-ATAAATATTGGAATAATATATC 2155 Query: 1655 ACTTAATTTTCAGCTTTAGTCATTCTGAAAAGTGTTTATTTCTAGATGTTTCTTAACCTA 1714 A TA TT TCAG TTT G CAT AA T TTAT T TA T TT TTA T Sbjct: 2156 AAATATTTATCAGTTTTGG-CATGAC-AATTTTAATTATATTTATTTTTTGATTAGTTTT 2213 Query: 1715 ATTGCATGTTTATTGACAAATTACCTTTTTTTTTTAAGACCACATTTCCTACT-AAGGAT 1773 TT T TTT TT AAA T CTTTTTTTTTT A TTT T T AA T Sbjct: 2214 TTTTTTTTTTTTTTTTTAAAATTTCTTTTTTTTTTTTTTT-ATTTTTAATTTTTAATTTT 2272 Query: 1774 TAAGGT-CTGACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGTGGCAGTGTC 1832 TA T C ACA T T A T TA T TTT TT ATT AA T T T Sbjct: 2273 TATTTTTCCCACACTTTCATT-T-TATTTTATTTTATTT-ATTGTAAAT-TCATTTTATT 2328 Query: 1833 TACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAAT-AGAG--TTAGGATCTGGTAGAT 1889 TA TTTAAT AAA T T TT T TTTTA T A AG TT A TGG GA Sbjct: 2329 TATT-TTTAATTAAATAGTTTTGGTT-TAATTTTATTCAAAGATTTTAAAAATGGACGA- 2385 Query: 1890 AATTGCACCTCAATGAGGCATAACTTTGCAAATATTAGACTATGCCATTTC-ATGAGTT- 1947 A TT A TC TG GG ATA TTT AA TT TA C TTT A GA TT Sbjct: 2386 ACTT--ATTTCT-TG-GG-ATAGGTTTTTTAAGTTTTTTGTAATACTTTTGGAAGAATTC 2440 Query: 1948 ATAGATTGTTATAATGATCTTGTATTTTTATGT-TCATTTATTGAAGTTCT 1997 A AG TTGT A A AT TGT TTT GT TC TTAT GA TTCT Sbjct: 2441 AAAGGTTGTAAAAGAAATGATGTGCGTTTGAGTGTCGATTAT-GACATTCT 2490 Score = 178 (26.7 bits), Expect = 0.52, Sum P(2) = 0.41 Identities = 42/50 (84%), Positives = 42/50 (84%), Strand = Plus / Plus Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 ||| || ||||||||||||||||| |||||||| ||||| || ||| || Sbjct: 4954 AGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATG 5003 Score = 142 (21.3 bits), Expect = 0.040, Sum P(2) = 0.039 Identities = 106/187 (56%), Positives = 106/187 (56%), Strand = Plus / Plus Query: 1937 TTTCATGAGTTATAGATTGTTATAATGAT-CTTGTATTTTTA--TGTTCATTTATTGAAG 1993 TTT AT A TT TA TT TT T T T CTT T TTTTTA T TT A T TT Sbjct: 1817 TTTAATAAATTCTACTTTTTTTTTTTTTTTCTTTTTTTTTTAAATTTTAAAATTTTTTTT 1876 Query: 1994 TTCTAGTTATTTCTGG-AGTTGCTG-TGGATCTACAGATACGTGATATTTTGGTATAACT 2051 TT TA TTA TCT A TT T AT TA A TA G TATTTT ATA Sbjct: 1877 TTTTA-TTAGATCTCATAATTAAAAATCAATTTAAAATTAAAAGTTATTTTTAAATATGC 1935 Query: 2052 AGAATCTTGATTTCTTTCATAAAGTTCTGCCA--TGTT--CTATTTCTTTCCTTAATCTT 2107 A AA CT A T AT AGTT CCA T TT CTATTTCTTT TT T TT Sbjct: 1936 AAAAACTATAAAAAACTAATGTAGTTTAACCAACTTTTTTCTATTTCTTTTTTTTTTTTT 1995 Query: 2108 TTTTTCTT 2115 TTTTT TT Sbjct: 1996 TTTTTTTT 2003 >X75420 P.falciparum (FCR3) cpn60 gene. Length = 3801 Plus Strand HSPs: Score = 333 (50.0 bits), Expect = 6.3e-05, P = 6.3e-05 Identities = 147/234 (62%), Positives = 147/234 (62%), Strand = Plus / Plus Query: 2101 TAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGG-AAGGATATTGCTGC 2159 TAA T TTTT CT CT TT TC C TT TT G AA ATA C Sbjct: 2801 TAAAGGTATTTTAGATTCTTCTATTAACTCACCAAATTATTTAAGTAAACATAGAAGAAC 2860 Query: 2160 ATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTG-TCAAG--GCTGAAAA 2216 TAT A TAAA A A TGATG AG A A G AG G T AAG G TGAA A Sbjct: 2861 TTATAAACATAAACTACATGATGATGAAGATACTGATGAAGACGATGAAGAAGATGAAGA 2920 Query: 2217 A-AGCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGA 2273 A AAGA A GAAG GA GGA GA GATGA A GATGA GA GATGAGGA GA Sbjct: 2921 CGATGAAGATGATGAAGATGATTTGGATGATGATGATTATGATGATGAAGATGAGGAAGA 2980 Query: 2274 GGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG--ATGAATAA 2325 GAGGAAGATGAAGAAGATGAAGATGA GAAGA GATGA GAT ATGAAT A Sbjct: 2981 TGAGGAAGATGAAGAAGATGAAGATGATGAAGATGATGAAGATTCTATGAATGA 3034 Score = 303 (45.5 bits), Expect = 0.0015, P = 0.0015 Identities = 189/326 (57%), Positives = 189/326 (57%), Strand = Plus / Plus Query: 2207 AGGCTGAAAAAAGCAA-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 A G TGAA A A A GAA A GA G AAGA GA GAAGA GA GAAGATGA GA GAT Sbjct: 2881 ATGATGAAGATACTGATGAAGACGATG-AAGAAGATGAAGACGATGAAGATGATGAAGAT 2939 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GA GGA GA GA GAT A GA GATGAAGATGA GAAGA GA GA GATGA GAA A Sbjct: 2940 GATTTGGATGATGATGATTATGATGATGAAGATGAGGAAGATGAGGAAGATGAAGAAGAT 2999 Query: 2326 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 2385 G G T T G G T TT CT T AT A G AT AA TG A A A Sbjct: 3000 GAAGATGATGAAGATGATGAAGATT-CTA-TGAATGACGAATACAATTATGATGAATAAA 3057 Query: 2386 ACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAAC 2445 A A T TA A A A A AT A AT TA T T TAA ATT GT T TA Sbjct: 3058 AAAAATAAAATATATACACACATATATATATATA----TATATAA-ATT-GTATATATTG 3111 Query: 2446 TGTACAGTGTCT-TTTTTTGTATAGTTAACA-CACTACCGAATGTGTCTTT-AGATAGCC 2502 T TA A T T TTTTTT TATA T A C T C A TGT TTT A ATA C Sbjct: 3112 TATATATTTTTAATTTTTTTTATAATATTTATCTTTTTCTATTGTTAATTTTACATAACA 3171 Query: 2503 CTGTCCTGGTGGTATTTTCAATAGCCACTA 2532 CT T GT TA T T A TA C A TA Sbjct: 3172 CTTATTTTGTCCTAATATAATTATCTATTA 3201 Score = 272 (40.8 bits), Expect = 0.039, P = 0.038 Identities = 164/272 (60%), Positives = 164/272 (60%), Strand = Plus / Plus Query: 2206 AAGG-CTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 AAG CT A AAA A AA A A GA G A GA GA GATGA GA GATGAAGA G Sbjct: 2855 AAGAACTTATAAACATAAACTACATGATG-ATGAAGATACTGATGAAGACGATGAAGAAG 2913 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 ATGA GA GA GA GA GATGAAGA GAT GATGA GA GA ATGATGATGA GA T Sbjct: 2914 ATGAAGACGATGAAGATGATGAAGATGATTTGGATGATGATGATTATGATGATGAAGA-T 2972 Query: 2324 AAGTTGGTTCTAGCGCAGTTTTTTTTT-TCTTGTCTATAAAGCATT-T-AACCCCCC-TG 2379 AG G T AG G AG T T G AT AAG AT T AA C TG Sbjct: 2973 GAGGAAGATG-AG-GAAGATGAAGAAGATGAAGATGATGAAG-ATGATGAAGATTCTATG 3029 Query: 2380 TAC-ACAACT-CACTCCTTTTAAAGAAAAAAATTGAAATGTA-AGGCTG-TGTA-AGATT 2434 A AC A T CA T T T AA AAAAAAA T AAAT TA A C T TA A AT Sbjct: 3030 AATGACGAATACAATTATGATGAATAAAAAAAATAAAATATATACACACATATATATATA 3089 Query: 2435 TGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTT 2471 T T T TAAA TGTA A T T T T T T TA TT Sbjct: 3090 TATATATAAATTGTATATATTGTATATATTTTTAATT 3126 >X67597 X.laevis mRNA for calreticulin (clone 3) Length = 1291 Plus Strand HSPs: Score = 329 (49.4 bits), Expect = 6.3e-05, P = 6.3e-05 Identities = 117/158 (74%), Positives = 117/158 (74%), Strand = Plus / Plus Query: 2169 TAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAA 2226 T AAGGAA AGC GATG AG A A G AG CA GG GAA AA AG AAGA Sbjct: 1055 TGAAGGAACAGCAGGATG-AGGAGGATCGCAAGAAA-CA-GGAAGAAGAAGAG-AAGACG 1110 Query: 2227 AAGAAGGAAGAGGAGG-A-AG-ATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 A GAAGGA GA GAG A AG A GAGGAAGATGA GA GATGA GA GAGGAGGAA A Sbjct: 1111 AGGAAGGAGGAAGAGCCACAGGAAGAGGAAGATGAGGACGATGATGATGAGGAGGAAAAA 1170 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GAAGA GAAG GAAGAAGAAGA GA GA GATGAA AAG Sbjct: 1171 GAGGAAGA-GAAG--GAAGAAGAAGAGGAGGAAGATGAAGAAG 1210 Score = 283 (42.5 bits), Expect = 0.0087, P = 0.0087 Identities = 113/158 (71%), Positives = 113/158 (71%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AAA GAAA CCTG G G A AAAGG AG G AAG AA AAG AA A A G Sbjct: 1014 AAACGAAA-CCTGGGGG-GTTACAAAGGAAGCAGAAAAGAA--AATGAAGGAACAGCAGG 1069 Query: 2230 AAGGAAGAGGAG-G-AAGATG-AGGAAGATGAAGAGGATGAGGAGGA-GGAGGAAGATG- 2284 A G A GAGGA G AAGA AGGAAGA GAAGAG A GA GAGGA GGAGGAAGA Sbjct: 1070 ATG-AGGAGGATCGCAAGAAACAGGAAGAAGAAGAGAA-GACGAGGAAGGAGGAAGAGCC 1127 Query: 2285 A-AG-AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A AG AAGA GAAGATGA GA GA GATGATGA GA GAA AAG Sbjct: 1128 ACAGGAAGAGGAAGATGAGGACGATGATGATGAGGAGGAAAAAG 1171 Score = 280 (42.0 bits), Expect = 0.012, P = 0.012 Identities = 106/154 (68%), Positives = 106/154 (68%), Strand = Plus / Plus Query: 2172 AGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAA-AA-AGCAAGAAAAAG 2229 AGGA GC GA CAG AA AA GAG G C AGG G A AA AGC A A AAG Sbjct: 1076 AGGATCGCAAGAAACAGGAAGAAGAAGAGAAGACGAGGAAGGAGGAAGAGCCACAGGAAG 1135 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 A GGAAGA GAGGA GATGA GA GA GA GA A GAGGA GAG AGGAAGA GAAGA Sbjct: 1136 A-GGAAGATGAGGACGATGATGATGAGGAGGAAAAAGAGGAAGAGAAGGAAGAAGAAGAG 1194 Query: 2290 GATGAAGATGAAGAAGAAG-A----TGAT-GATGA 2318 GA GAAGATGAAGAAGAA A T A GATGA Sbjct: 1195 GAGGAAGATGAAGAAGAAACACCTCTTAAAGATGA 1229 >D83006 Yeast DNA for MNN4 gene, complete cds. Length = 4000 Plus Strand HSPs: Score = 333 (50.0 bits), Expect = 6.3e-05, P = 6.3e-05 Identities = 153/232 (65%), Positives = 153/232 (65%), Strand = Plus / Plus Query: 2116 CCCTACTGTTTTATCCTCC--CTTTGCTT-TGGAAGGATA-TTGCTGCATATCGAGCTAA 2171 CCCTA T TT TAT C CT TGCTT TG A G TA TTG G A A AGC A Sbjct: 3478 CCCTATTATTGTATACGAGGACTATGCTTATGCCAAGTTACTTGAAGAA-AGAAAGCGGA 3536 Query: 2172 AGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAAAA-AGCAA--GAAA 2226 GGA AAG GA G AG A AA GGAG G AAG GAA AA AG AA GAAA Sbjct: 3537 GGGAGAAGAA-GAAGAAGGAGGAAGAGGAGAAGAAGAAGAAGGAAGAAGAGGAAAAGAAA 3595 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATG-AAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AAGAAGGAAGA GA GAA A GA AAGA G AAGAGGA GAG AG A AG A GA GA Sbjct: 3596 AAGAAGGAAGAAGAAGAAAA-GAAAAAGAAGGAAGAGGAAGAGAAGAAAAAGAAGGAAGA 3654 Query: 2286 AGAAGATGAAGATGAAGAAG-AAGATGATGATGATGAATAAGTTGGTTCTAGCGCAG 2341 AGAAGA GAAGA AAGAAG AAGA GA GA A GAA AAG GG AG G AG Sbjct: 3655 AGAAGA-GAAGAAAAAGAAGGAAGAAGAAGAAAA-GAAGAAGCAGGAGGAAGAGGAG 3709 Score = 311 (46.7 bits), Expect = 0.00064, P = 0.00064 Identities = 117/160 (73%), Positives = 117/160 (73%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AAAAGCAAGAAAAA 2228 AAA GAA G GA G AG AA AA AG G AAG GAA AAAAG AAGAA A Sbjct: 3642 AAAAGAAGGAA-GAAGAAGAGAAGAAAA-AGAAGG-AAGAA-GAAGAAAAG-AAGAAGCA 3696 Query: 2229 GAAGGAAGAGGAGGAA--GATGA-GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 G AGGAAGAGGAG AA GA GA GGAAGA GAAGAG A AG AG AGGA GAAG GA Sbjct: 3697 GGAGGAAGAGGAGAAAAAGAAGAAGGAAGAAGAAGAGAAGAAGAAGCAGGAAGAAGGAGA 3756 Query: 2286 AGAAGATGAAGA-TGAAGAAGAAGATGATGATGATGAAT-AAGTTG 2329 A AAGATGAAGA TGAAGA GAAGA AT A GA GAAT AAG TG Sbjct: 3757 A-AAGATGAAGAATGAAGATGAAGAAAATAA-GAAGAATGAAGATG 3800 Score = 301 (45.2 bits), Expect = 0.0018, P = 0.0018 Identities = 117/170 (68%), Positives = 117/170 (68%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAA-GCCTGATGCAGCAAAAAAGGGA--GTTGTCA-AGGCTGAAAAAAGC 2220 GAG AAAG AAA G GA G AG A AAAAG A G G A AGG GA AA A Sbjct: 3584 GAGGAAAAGAAAAAGAAGGAAGAAGAAGAAAAGAAAAAGAAGGAAGAGGAAGAGAAGAAA 3643 Query: 2221 AAGAAA-AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGA 2279 AAGAA AAGAAG AAGAG AG AA A AGGAAGA GAAGA A AG AG AGGAGGA Sbjct: 3644 AAGAAGGAAGAAG-AAGAGAAGAAAAAGAAGGAAGAAGAAGAAAAGAAGAAGCAGGAGGA 3702 Query: 2280 AGATGAAGAAGATGAAGATG-AAGAAGAAGATGATGATGATGAAT-AAGTTGG 2330 AGA GA GAA A GAAGA G AAGAAGAAGA GA GA GA G A AAG GG Sbjct: 3703 AGAGGA-GAAAAAGAAGAAGGAAGAAGAAGA-GAAGAAGAAGCAGGAAGAAGG 3753 Score = 297 (44.6 bits), Expect = 0.0028, P = 0.0028 Identities = 117/159 (73%), Positives = 117/159 (73%), Strand = Plus / Plus Query: 2171 AAGGAA-AGCCTGATGCAGCAAAA-AAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAA 2228 AAGGAA A GA G AG AAAA AAGG AG G AAG AA AAGCA GA AA Sbjct: 3647 AAGGAAGAAGAAGA-GAAGAAAAAGAAGGAAGAAG--AAGAAAAGAAGAAGCAGGAGGAA 3703 Query: 2229 GAAG-GAAGAGGAGGAAG-ATGAGGAAGATGAAGAGGATG-AGGAGGA-GGAGGAA-GAT 2283 GA G GAA A GA GAAG A GA GAAGA GAAGA GA G AGGA GA GGAG AA GAT Sbjct: 3704 GAGGAGAAAAAGAAGAAGGAAGAAGAAGA-GAAGAAGAAGCAGGAAGAAGGAGAAAAGAT 3762 Query: 2284 GAAGAAGATGAAGATGAAGAAGA-A-GATGA-TGATGATGAATAA 2325 GAAGAA TGAAGATGAAGAA A A GA GA TGA GATGAA AA Sbjct: 3763 GAAGAA--TGAAGATGAAGAAAATAAGAAGAATGAAGATGAAGAA 3805 Score = 284 (42.6 bits), Expect = 0.011, P = 0.011 Identities = 114/163 (69%), Positives = 114/163 (69%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGG-GAGTTGTCAAGGCTGAAAAAAGCAAGAAAAA 2228 AAG A AAGC GA G AG A AAAAG GA T AAG TGAA AAA AAGAA AA Sbjct: 3734 AAGAAGAAGCAGGAAGAAGGAGAAAAGATGAAGAATGAAGA-TGAAGAAAATAAGAAGAA 3792 Query: 2229 -GAAG--GAAGAGGAGGAAGATGAG-GAAGATGAAGAGGATGAGGAGGAGGA-G-GAAGA 2282 GAAG GAAGA AG AAGA GA GAAGA GA GA A AG AG AGGA G GAA A Sbjct: 3793 TGAAGATGAAGAAAAG-AAGAAGAACGAAGAAGAGGAAAAAAAGAAGCAGGAAGAGAAAA 3851 Query: 2283 TGAAGAAGA-TGAAGATGAAGAAGAAGATGATG-ATGATGAATAAG 2326 AAGAAGA TGAAGATGAAGAA AAGA GA G A GA GA AAG Sbjct: 3852 ACAAGAAGAATGAAGATGAAGAA-AAGAAGAAGCAGGAAGAGGAAG 3896 Score = 280 (42.0 bits), Expect = 0.017, P = 0.017 Identities = 118/167 (70%), Positives = 118/167 (70%), Strand = Plus / Plus Query: 2170 AAAGGAAAGCCTGATGCAGCAAAAAAGG-G-AGTTGTCA-AGGCTGAAAA-AAGCAAGAA 2225 AAA GAA G GA G AG AAA AAG G AG G A AGG AAAA AAG A GAA Sbjct: 3666 AAAAGAAGGAA-GAAGAAGAAAAGAAGAAGCAGGAGGAAGAGGAGAAAAAGAAGAAGGAA 3724 Query: 2226 AAAGAAG-GAAGA-G--G-AGGAAGATG-AGGAA-GATGAAGAG-GATGAGGAGGAGGAG 2277 AAGAAG GAAGA G G AGGAAGA G AG AA GATGAAGA GA GA GA GA A Sbjct: 3725 GAAGAAGAGAAGAAGAAGCAGGAAGAAGGAGAAAAGATGAAGAATGAAGATGAAGAAAAT 3784 Query: 2278 GAAGATGAA-GAAGATGAAGATGAAGAAGAAGAT-GATGATGATGAATAA 2325 AAGA GAA GAAGATGAAGA AAGAAGAAGA GA GA GA GAA AA Sbjct: 3785 -AAGAAGAATGAAGATGAAGAA-AAGAAGAAGAACGAAGAAGAGGAAAAA 3832 Score = 276 (41.4 bits), Expect = 0.026, P = 0.025 Identities = 112/155 (72%), Positives = 112/155 (72%), Strand = Plus / Plus Query: 2171 AAGGAAA-GCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAG AAA G GA G AG A AAAAG AG G CA GG GAA A AG AA AA AA Sbjct: 3662 AAGAAAAAGAAGGAAGAAGAAGAAAAGA-AGAAG-CA-GGAGGAAGAGGAGAAA-AAGAA 3717 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAG-ATGAAGA-GGATGAG-GAGGAGGAG-GAAGATG 2284 GAAGGAAGA GA GA GA GA GAAG A GAAGA GGA A GA GA GA GAAGATG Sbjct: 3718 GAAGGAAGAAGAAGA-GAAGAAGAAGCAGGAAGAAGGAGAAAAGATGAAGAATGAAGATG 3776 Query: 2285 AAGAAGATGAAGATGAA-GAAGAAGATGATGATGATGAATAA 2325 AAGAA AT AAGA GAA GAAGA GA GA A GA GAA AA Sbjct: 3777 AAGAAAAT-AAGAAGAATGAAGATGAAGAAAA-GAAGAAGAA 3816 Score = 273 (41.0 bits), Expect = 0.035, P = 0.035 Identities = 111/160 (69%), Positives = 111/160 (69%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAA 2225 AG T AAG AA G GATG AG AAA AAG AG T AAG TGAA AAA AGAA Sbjct: 3759 AGATGAAG-AATGAA-GATGAAGAAAATAAGA-AGAA-TGAAGA-TGAAGAAA---AGAA 3810 Query: 2226 AAAGAAGGAAGAGGAGGAAGATGAGGAAG-ATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 AAGAA GAAGA GAGGAA A AG AAG A GAAGAG A A AG AG A GAAGATG Sbjct: 3811 GAAGAACGAAGAAGAGGAAAAAAAG-AAGCAGGAAGAGAAAAACAAGAAGAATGAAGATG 3869 Query: 2285 AAGAAGATGAAGATGAAG-AAGAAGATGATGATGATGAATAA 2325 AAGAA A GAAGA G AG AAGA GA GA A GA GAA AA Sbjct: 3870 AAGAAAA-GAAGAAGCAGGAAGAGGAAGAAAA-GAAGAAGAA 3909 Score = 261 (39.2 bits), Expect = 0.12, P = 0.12 Identities = 123/187 (65%), Positives = 123/187 (65%), Strand = Plus / Plus Query: 2144 GGAAGGATATTGC-TGCATATCGAGCTAA-AGGAAAGCCTGATGCAGCAAAAAAGGGAGT 2201 G AA GAT G TG A AT AG AA A GAA G TGA G G A AAAAG AG Sbjct: 3755 GAAAAGATGAAGAATGAAGATGAAGAAAATAAGAA-GAATGAAGATGAAGAAAAGA-AGA 3812 Query: 2202 TGTCAAGGCTGAAAAAAGCAAGAAA-AAGAAGGAAGAGGAGGAAGATGAGGAA-GATGAA 2259 G AA G GAA A G AA AAA AAG AGGAAGAG A AA A GA GAA GA GA Sbjct: 3813 AG--AACGAAGAAGAG-GAAAAAAAGAAGCAGGAAGAGAAA-AACAAGAAGAATGAAGAT 3868 Query: 2260 GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAA-GAAGAAGATGATGATGA 2318 GA GA AG AG AG AGGAAGA GAAGAA A GAAGA GAA GAAGAAGA GA A A Sbjct: 3869 GAAGAAAAGAAGAAGCAGGAAGAGGAAGAAAA-GAAGAAGAACGAAGAAGAGGAAAAAAA 3927 Query: 2319 TGAATAAGTTGG 2330 GAA AG GG Sbjct: 3928 -GAAGCAGGAGG 3938 Score = 257 (38.6 bits), Expect = 0.19, P = 0.17 Identities = 115/168 (68%), Positives = 115/168 (68%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAAAGCAA 2222 GAG AAAG A AAG GA G AG AA AAG AG G A A G GAAAA A AA Sbjct: 3707 GAGAAAAAGAAGAAGGAAGAAGAAGAGAAGAAGA-AGCAGGAAGAAGGAGAAAAGATGAA 3765 Query: 2223 GAA--AA-A-GAAGGAAG-AGGAGGAA-GATGAGGAAGATGAAGAGGATGAG-GAGGAGG 2275 GAA AA A GAAG AA A GA GAA GA GA GAAGA AAGA GA GA GA GA G Sbjct: 3766 GAATGAAGATGAAGAAAATAAGAAGAATGAAGATGAAGAA-AAGAAGAAGAACGAAGAAG 3824 Query: 2276 AGGAAGATGAAGAAG-ATGAAGATGAAGAAGAAGATGA-TGATGATGAATAA 2325 AGGAA A AAGAAG A GAAGA GAA AA AAGA GA TGA GATGAA AA Sbjct: 3825 AGGAAAAA-AAGAAGCAGGAAGA-GAAAAACAAGAAGAATGAAGATGAAGAA 3874 >X79327 R.norvegicus (Sprague Dawley) calreticulin mRNA. Length = 1539 Plus Strand HSPs: Score = 330 (49.5 bits), Expect = 6.4e-05, P = 6.4e-05 Identities = 136/190 (71%), Positives = 136/190 (71%), Strand = Plus / Plus Query: 2141 TTTGG-AAGGATAT-TGCTGCAT-ATCGAG-CTAAAGGAAAGCCTGATGCAGCAAAAA-A 2195 TTTGG AA GA A TG G T A C AG CT AG AAGC GATG AG A AA A Sbjct: 1037 TTTGGCAATGAGACCTGGGGTGTCACCAAGGCTGCAGAGAAGCA-GATGAAGGACAAGCA 1095 Query: 2196 GG--GAGTTGTCA-AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGA 2252 GG GAG G CA AGGCT AA AAG AAGAA AAGA AAGA G G AA A GAGGA Sbjct: 1096 GGATGAGGAG-CAGAGGCTTAAGGAAG-AAGAAGAAGAC--AAGAAGCGTAA-A-GAGGA 1149 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGA-AGAAGATGAAGATGAAGAAGAAGATG 2311 AGA GA G GA GA A GAGGA GA GATGA AGA GATGAAGATGAAGA GAAGA G Sbjct: 1150 AGAGGAGGCCGAGGATAAAGAGGATGAGGATGACAGA-GATGAAGATGAAGATGAAGAGG 1208 Query: 2312 ATGATGATGAATAAGTTG 2329 ATGA A GAA AAG TG Sbjct: 1209 ATGAGAAGGAAGAAGATG 1226 Score = 311 (46.7 bits), Expect = 0.00048, P = 0.00048 Identities = 119/169 (70%), Positives = 119/169 (70%), Strand = Plus / Plus Query: 2155 GCTGCATATC-G-AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGC 2210 GCTGCA A G AG T AAGGA AAGC GATG AG A A AGG G A A G Sbjct: 1067 GCTGCAGAGAAGCAGATGAAGGACAAGCAGGATG-AGGAGCAGAGGCTTAAGGAAGAAGA 1125 Query: 2211 TGAAAA-AAGCAAGAA-AAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAG 2268 GAA A AAG AAG AAAGA GGAAGAGGAGG GA GA AAGA GA GAGGATGA Sbjct: 1126 AGAAGACAAG-AAGCGTAAAGA-GGAAGAGGAGGCCGAGGATAAAGAGGATGAGGATGAC 1183 Query: 2269 -GAG--GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 GAG GA GA GAAGATGAAGA GATGA A GAAGAAGA GA GA GATG Sbjct: 1184 AGAGATGAAGATGAAGATGAAGAGGATGAGAAGGAAGAAGATGAGGAGGATG 1235 Score = 249 (37.4 bits), Expect = 0.36, P = 0.30 Identities = 125/184 (67%), Positives = 125/184 (67%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGA--AAGCCTGATGCAGCAAAAAAGGGAGTT 2202 GAAGGA A GC G AT GAGC A AGG AAG GA G AG A A AAG AG Sbjct: 1084 GAAGGACAA-GCAGGATGAGGAGC-AGAGGCTTAAGGAAGAAGAAGAAGACAAGA-AGC- 1139 Query: 2203 GTCAAGGCTGAAAAA-AG-CA-AGAA-AAAGAAGGAAGAGGAGGA-AGATGAGGAAGATG 2257 GT AAG GAA A AG C AG A AAAGA GGA GAGGA GA AGA GA GAAGATG Sbjct: 1140 GTAAAGAG-GAAGAGGAGGCCGAGGATAAAGA-GGATGAGGATGACAGA-GATGAAGATG 1196 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAG--A-TGAAGAAGAAGATGATG 2314 AAGA GA GAGGA GAG AGGAAGA GA GA GA GA G A TG AAG A GATG Sbjct: 1197 AAGATGAAGAGGATGAGAAGGAAGAAGATGAGGAGGATGCCACTGGCCAAGCCAAGGATG 1256 Query: 2315 ATGATGAATAAG 2326 A G TG A A G Sbjct: 1257 A-GCTGTAGAGG 1267 >X76589 H.sapiens DNA 3' flanking simple sequence region clone wg2c3. Length = 236 Plus Strand HSPs: Score = 282 (42.3 bits), Expect = 6.6e-05, P = 6.6e-05 Identities = 92/132 (69%), Positives = 92/132 (69%), Strand = Plus / Plus Query: 2193 AAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGA--AAAAGAAGGAAGAGGAGGAAGATGA 2249 AAA G AG G AA GC GAAAAA A AAGA AAAAG AGGA GAGGAGGA GA GA Sbjct: 30 AAAAGCAGGAGCAAAAGCAGAAAAAGAAGAAGAGGAAAAGGAGGAGGAGGAGGAGGAGGA 89 Query: 2250 GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGA 2309 GGA GA GA GAGG G GGAGGAGGAGGA G GA GA GA GA G GA GA GA GA Sbjct: 90 GGAGGAGGAGGAGGCGGCGGAGGAGGAGGAGGCGGAGGAGGAGGAGGCGGAGGAGGAGGA 149 Query: 2310 TGATGATGATGA 2321 GA G GA GA Sbjct: 150 GGAGGCGGAGGA 161 Score = 247 (37.1 bits), Expect = 0.0026, P = 0.0026 Identities = 99/157 (63%), Positives = 99/157 (63%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAG 2223 GAGC AAAG A A GA G AG AAAAGG G G AGG GA A AG A G Sbjct: 38 GAGCAAAAGCAGAAAAAGAAGAAGAGGAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 97 Query: 2224 AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 A A G GG GAGGAGGA GA G GGA GA GA GAGG GAGGAGGAGGAGGA G Sbjct: 98 AGGAGGC-GGCGGAGGAGGAGGAGGCGGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGGCG 156 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GA GA GA GA GA G GA GA GA GA GA G GA Sbjct: 157 GAGGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGGCGGA 194 Score = 242 (36.3 bits), Expect = 0.0044, P = 0.0044 Identities = 100/160 (62%), Positives = 100/160 (62%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAG 2223 GAGC AAAG A A GA G AG AAAAGG G G AGG GA A AG A G Sbjct: 38 GAGCAAAAGCAGAAAAAGAAGAAGAGGAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 97 Query: 2224 AAAAAGAAG-GAAG-AGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 A A G G G AG AGGAGGA G GAGGA GA GA G GGA GAGGAGGAGGAGG G Sbjct: 98 AGGAGGCGGCGGAGGAGGAGGAGGCGGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGGCGG 157 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 A GA GA GA GA G GA GA GA GA GA G GA GA Sbjct: 158 AGGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGGCGGAGGA 197 Score = 241 (36.2 bits), Expect = 0.0049, P = 0.0048 Identities = 73/104 (70%), Positives = 73/104 (70%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 || | || ||| |||||||| || | ||| || || ||||| | |||||||||||| | Sbjct: 128 AGGAGGAGGCGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAGG 187 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 | | || || || || || || || || || || | ||| || Sbjct: 188 AGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCAGAAAAA 231 Score = 237 (35.6 bits), Expect = 0.0074, P = 0.0074 Identities = 101/157 (64%), Positives = 101/157 (64%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAA 2222 GAG AAAGGA AG GA G AG A A GGAG G AGGC G A AG A Sbjct: 61 GAGGAAAAGGAGGAGGAGGAGG-AGGAGGAGGAGGAGGAGG--AGGCGGCGGAGGAGGAG 117 Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GA GA GGA GAGGAGG GA GAGGA GA GA G GGA GAGGAGGAGGAGG GA Sbjct: 118 GAGGCGGA-GGAGGAGGAGGCGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGGCGGA 176 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GA GA GA GA G GA GA GA GA GA GA GA GA Sbjct: 177 GGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGGAGGAGGA 215 Score = 228 (34.2 bits), Expect = 0.019, P = 0.019 Identities = 66/90 (73%), Positives = 66/90 (73%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AG A AG GGA GAGGAGGA GA G GGA GA GA GAGGA G GGAGGAGGAGGA G Sbjct: 146 AGGAGGAGGCGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAGG 205 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAA-GAT 2310 A GA GA GA GA GA G AGAA AA GAT Sbjct: 206 AGGAGGAGGAGGAGGAGGCAGAAAAAAGAT 235 >D78308 Rat mRNA for calreticulin, complete cds. Length = 1816 Plus Strand HSPs: Score = 330 (49.5 bits), Expect = 7.0e-05, P = 7.0e-05 Identities = 136/190 (71%), Positives = 136/190 (71%), Strand = Plus / Plus Query: 2141 TTTGG-AAGGATAT-TGCTGCAT-ATCGAG-CTAAAGGAAAGCCTGATGCAGCAAAAA-A 2195 TTTGG AA GA A TG G T A C AG CT AG AAGC GATG AG A AA A Sbjct: 1039 TTTGGCAATGAGACCTGGGGTGTCACCAAGGCTGCAGAGAAGCA-GATGAAGGACAAGCA 1097 Query: 2196 GG--GAGTTGTCA-AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGA 2252 GG GAG G CA AGGCT AA AAG AAGAA AAGA AAGA G G AA A GAGGA Sbjct: 1098 GGATGAGGAG-CAGAGGCTTAAGGAAG-AAGAAGAAGAC--AAGAAGCGTAA-A-GAGGA 1151 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGA-AGAAGATGAAGATGAAGAAGAAGATG 2311 AGA GA G GA GA A GAGGA GA GATGA AGA GATGAAGATGAAGA GAAGA G Sbjct: 1152 AGAGGAGGCCGAGGATAAAGAGGATGAGGATGACAGA-GATGAAGATGAAGATGAAGAGG 1210 Query: 2312 ATGATGATGAATAAGTTG 2329 ATGA A GAA AAG TG Sbjct: 1211 ATGAGAAGGAAGAAGATG 1228 Score = 311 (46.7 bits), Expect = 0.00052, P = 0.00052 Identities = 119/169 (70%), Positives = 119/169 (70%), Strand = Plus / Plus Query: 2155 GCTGCATATC-G-AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGC 2210 GCTGCA A G AG T AAGGA AAGC GATG AG A A AGG G A A G Sbjct: 1069 GCTGCAGAGAAGCAGATGAAGGACAAGCAGGATG-AGGAGCAGAGGCTTAAGGAAGAAGA 1127 Query: 2211 TGAAAA-AAGCAAGAA-AAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAG 2268 GAA A AAG AAG AAAGA GGAAGAGGAGG GA GA AAGA GA GAGGATGA Sbjct: 1128 AGAAGACAAG-AAGCGTAAAGA-GGAAGAGGAGGCCGAGGATAAAGAGGATGAGGATGAC 1185 Query: 2269 -GAG--GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 GAG GA GA GAAGATGAAGA GATGA A GAAGAAGA GA GA GATG Sbjct: 1186 AGAGATGAAGATGAAGATGAAGAGGATGAGAAGGAAGAAGATGAGGAGGATG 1237 Score = 249 (37.4 bits), Expect = 0.38, P = 0.31 Identities = 125/184 (67%), Positives = 125/184 (67%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGA--AAGCCTGATGCAGCAAAAAAGGGAGTT 2202 GAAGGA A GC G AT GAGC A AGG AAG GA G AG A A AAG AG Sbjct: 1086 GAAGGACAA-GCAGGATGAGGAGC-AGAGGCTTAAGGAAGAAGAAGAAGACAAGA-AGC- 1141 Query: 2203 GTCAAGGCTGAAAAA-AG-CA-AGAA-AAAGAAGGAAGAGGAGGA-AGATGAGGAAGATG 2257 GT AAG GAA A AG C AG A AAAGA GGA GAGGA GA AGA GA GAAGATG Sbjct: 1142 GTAAAGAG-GAAGAGGAGGCCGAGGATAAAGA-GGATGAGGATGACAGA-GATGAAGATG 1198 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAG--A-TGAAGAAGAAGATGATG 2314 AAGA GA GAGGA GAG AGGAAGA GA GA GA GA G A TG AAG A GATG Sbjct: 1199 AAGATGAAGAGGATGAGAAGGAAGAAGATGAGGAGGATGCCACTGGCCAAGCCAAGGATG 1258 Query: 2315 ATGATGAATAAG 2326 A G TG A A G Sbjct: 1259 A-GCTGTAGAGG 1269 >X53363 Rat mRNA for calreticulin Length = 1882 Plus Strand HSPs: Score = 330 (49.5 bits), Expect = 7.1e-05, P = 7.1e-05 Identities = 136/190 (71%), Positives = 136/190 (71%), Strand = Plus / Plus Query: 2141 TTTGG-AAGGATAT-TGCTGCAT-ATCGAG-CTAAAGGAAAGCCTGATGCAGCAAAAA-A 2195 TTTGG AA GA A TG G T A C AG CT AG AAGC GATG AG A AA A Sbjct: 1059 TTTGGCAATGAGACCTGGGGTGTCACCAAGGCTGCAGAGAAGCA-GATGAAGGACAAGCA 1117 Query: 2196 GG--GAGTTGTCA-AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGA 2252 GG GAG G CA AGGCT AA AAG AAGAA AAGA AAGA G G AA A GAGGA Sbjct: 1118 GGATGAGGAG-CAGAGGCTTAAGGAAG-AAGAAGAAGAC--AAGAAGCGTAA-A-GAGGA 1171 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGA-AGAAGATGAAGATGAAGAAGAAGATG 2311 AGA GA G GA GA A GAGGA GA GATGA AGA GATGAAGATGAAGA GAAGA G Sbjct: 1172 AGAGGAGGCCGAGGATAAAGAGGATGAGGATGACAGA-GATGAAGATGAAGATGAAGAGG 1230 Query: 2312 ATGATGATGAATAAGTTG 2329 ATGA A GAA AAG TG Sbjct: 1231 ATGAGAAGGAAGAAGATG 1248 Score = 311 (46.7 bits), Expect = 0.00053, P = 0.00053 Identities = 119/169 (70%), Positives = 119/169 (70%), Strand = Plus / Plus Query: 2155 GCTGCATATC-G-AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGC 2210 GCTGCA A G AG T AAGGA AAGC GATG AG A A AGG G A A G Sbjct: 1089 GCTGCAGAGAAGCAGATGAAGGACAAGCAGGATG-AGGAGCAGAGGCTTAAGGAAGAAGA 1147 Query: 2211 TGAAAA-AAGCAAGAA-AAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAG 2268 GAA A AAG AAG AAAGA GGAAGAGGAGG GA GA AAGA GA GAGGATGA Sbjct: 1148 AGAAGACAAG-AAGCGTAAAGA-GGAAGAGGAGGCCGAGGATAAAGAGGATGAGGATGAC 1205 Query: 2269 -GAG--GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 GAG GA GA GAAGATGAAGA GATGA A GAAGAAGA GA GA GATG Sbjct: 1206 AGAGATGAAGATGAAGATGAAGAGGATGAGAAGGAAGAAGATGAGGAGGATG 1257 Score = 249 (37.4 bits), Expect = 0.38, P = 0.32 Identities = 125/184 (67%), Positives = 125/184 (67%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGA--AAGCCTGATGCAGCAAAAAAGGGAGTT 2202 GAAGGA A GC G AT GAGC A AGG AAG GA G AG A A AAG AG Sbjct: 1106 GAAGGACAA-GCAGGATGAGGAGC-AGAGGCTTAAGGAAGAAGAAGAAGACAAGA-AGC- 1161 Query: 2203 GTCAAGGCTGAAAAA-AG-CA-AGAA-AAAGAAGGAAGAGGAGGA-AGATGAGGAAGATG 2257 GT AAG GAA A AG C AG A AAAGA GGA GAGGA GA AGA GA GAAGATG Sbjct: 1162 GTAAAGAG-GAAGAGGAGGCCGAGGATAAAGA-GGATGAGGATGACAGA-GATGAAGATG 1218 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAG--A-TGAAGAAGAAGATGATG 2314 AAGA GA GAGGA GAG AGGAAGA GA GA GA GA G A TG AAG A GATG Sbjct: 1219 AAGATGAAGAGGATGAGAAGGAAGAAGATGAGGAGGATGCCACTGGCCAAGCCAAGGATG 1278 Query: 2315 ATGATGAATAAG 2326 A G TG A A G Sbjct: 1279 A-GCTGTAGAGG 1289 >AL021812 Human DNA sequence from cosmid U86H4 on chromosome X. Length = 45,199 Minus Strand HSPs: Score = 333 (50.0 bits), Expect = 7.3e-05, P = 7.3e-05 Identities = 101/136 (74%), Positives = 101/136 (74%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT T C TC C TC CTTCT CTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 31123 CTTCTCCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 31182 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCT-T-CTTTTTCTTGCTTTTTTCAGC 2209 C TC TCTTC TCTTC TC TCTTCCTCCTC TCCT T CTT TTCTT TTTTTT AG Sbjct: 31183 CTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCTTCTTCTTCTTCTTTTTTTGAGA 31242 Query: 2208 CTTGACAACTCCCTTTTT 2191 C GA CTC CT T T Sbjct: 31243 CA-GAGT-CTCACTCTGT 31258 Score = 313 (47.0 bits), Expect = 0.00060, P = 0.00060 Identities = 87/112 (77%), Positives = 87/112 (77%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCC 2271 CC CT TTC C TC C TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC Sbjct: 31128 CCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 31187 Query: 2270 TCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC--CTTCTTTTTCTTG 2220 TC TC TC TCTTC TCTTCCTC TC TCCTC TCTTC CTTCTTTTT TTG Sbjct: 31188 TCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCTTCTTCTTCTTCTTTTT-TTG 31239 >Y07969 H.sapiens mRNA for APRIL protein Length = 1371 Plus Strand HSPs: Score = 328 (49.2 bits), Expect = 7.3e-05, P = 7.3e-05 Identities = 94/125 (75%), Positives = 94/125 (75%), Strand = Plus / Plus Query: 2207 AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATG 2266 AGG GAA AA G AGAA A GA GGAAGA GAGGA GATGAGGA G TGAAGA GA G Sbjct: 733 AGGACGAAGAAGG--AGAAGATGA-GGAAGACGAGGACGATGAGGATGGTGAAGAAGAGG 789 Query: 2267 AGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AG GA GA GAAGATGA GAAGATGAAGATG AGAAG GATGA GA GA GA AAG Sbjct: 790 AGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGGGATGAGGACGACGATGAAG 849 Query: 2327 TTGGT 2331 T GT Sbjct: 850 TCAGT 854 Score = 313 (47.0 bits), Expect = 0.00036, P = 0.00036 Identities = 83/107 (77%), Positives = 83/107 (77%), Strand = Plus / Plus Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GA AAGA GGA GAGGA GAAGA G GAAGATGA GA GA GAGGA GA GAGGA G Sbjct: 720 GATGAAGA-GGAGGAGGACGAAGAAGGAGAAGATGAGGAAGACGAGGACGATGAGGATGG 778 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 TGAAGAAGA GA TGA GAAGAAGATGATGA GATGAA A GT G Sbjct: 779 TGAAGAAGAGGAGTTTGATGAAGAAGATGATGAAGATGAAGATGTAG 825 Score = 286 (42.9 bits), Expect = 0.0065, P = 0.0065 Identities = 110/155 (70%), Positives = 110/155 (70%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTT-G-TCAAG--GCTGAAAAA-AGCAAGAAAAAGAAGGAAG 2236 GATG G A AA AGG AGTT G T AAG G TGA AA A AAGA AGAAGG G Sbjct: 774 GATGGTGAAGAAGAGG-AGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGG-G 831 Query: 2237 AGGAGGAAGATGAGGAAGATGAA-GAGGATGAGGAGGAGGA-GGAA--GATGAAGAAGAT 2292 A GAGGA GA GA GAAG T A GAGGA GA GA GA GGA GATGAAGAAGAT Sbjct: 832 ATGAGGACGACGATGAAG-TCAGTGAGGAGGAAGAAGAATTTGGACTTGATGAAGAAGAT 890 Query: 2293 GAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 GAAGATGA GA GA GATGA GA GA GAA AAG TGG Sbjct: 891 GAAGATGAGGATGAGGATGAAGAGGAGGAAGAAGGTGG 928 Score = 277 (41.6 bits), Expect = 0.017, P = 0.017 Identities = 103/151 (68%), Positives = 103/151 (68%), Strand = Plus / Plus Query: 2172 AGGAAAG-CCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 AGGAA CCTGA CAG AGG G TG GG TGAA A G A GA A GA Sbjct: 682 AGGAAGCACCTGACTCAGATGCCGAGGTGGATGGTGTGGATGAAGAG-G-AGGAGGACGA 739 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 AG AAG GAG AAGATGAGGAAGA GA GA GATGAGGA G GA GAAGA GA G Sbjct: 740 AG-AAG--GAG-AAGATGAGGAAGACGAGGACGATGAGGATGGTGAAGAAGAGGAGTTTG 795 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 ATGAAGA GA GA GAAGATGA GATG GAA Sbjct: 796 ATGAAGAAGATGATGAAGATGAAGATGTAGAA 827 Score = 263 (39.5 bits), Expect = 0.076, P = 0.073 Identities = 119/184 (64%), Positives = 119/184 (64%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAG-CAAAAAAGGGAGTTG 2203 GAAG A AT G TG A AT AG T AG A G TGA G G C A AAG AGT G Sbjct: 798 GAAGAAGAT-GATGAAGATGAAGATGTAGAAGGGGATGAGGACGACGATGAAGTCAGT-G 855 Query: 2204 TCAAGGCTGAAAAAAGCA-AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 AGG GAA AA A A GAAG AAGA GA GA GA GA GA GATGAAGAG Sbjct: 856 AGGAGGAAGAAGAATTTGGACTTGATGAAG-AAGATGAAGATGAGGATGAGGATGAAGAG 914 Query: 2263 GATGAGGA-GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GA GA GA GG GG G AAG TGAA AAGA GAAGA GA GAA AGATGATGA G GA Sbjct: 915 GAGGAAGAAGGTGG-GAAAGGTGAA-AAGAGGAAGA-GA-GAAACAGATGATGAAGGAGA 970 Query: 2322 ATAAGTT 2328 A A G T Sbjct: 971 AGATGAT 977 Score = 251 (37.7 bits), Expect = 0.27, P = 0.24 Identities = 97/150 (64%), Positives = 97/150 (64%), Strand = Plus / Plus Query: 2181 TGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGG 2239 TG TG G AA AGG G G C AAG GA AA A A GAA A GA GGA GA G Sbjct: 713 TGGTGTGGATGAAGAGGAGGAGGACGAAGAAGGAGAAGATGAGGAAGACGA-GGACGATG 771 Query: 2240 AGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATG 2299 AGGA G TGA GAAGA GA GATGA GA GA GA GAAGATGAAGA G GAAG G Sbjct: 772 AGGATGGTGAAGAAGAGGAGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGGG 831 Query: 2300 AAGAAGAAGATGATGATGATGAATAAGTTGG 2330 A GA GA GA GATGA G T A T AG GG Sbjct: 832 ATGAGGACGACGATGAAG-TCAGTGAGGAGG 861 Score = 244 (36.6 bits), Expect = 0.58, P = 0.44 Identities = 70/95 (73%), Positives = 70/95 (73%), Strand = Plus / Plus Query: 2239 GAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGAT 2298 GA G GA G GGA G TG GA GA GAGGAGGAGGA GAAGA G AGAAGATGA GA Sbjct: 699 GATGCCGAGGTGGATGGTGTGGATGAAGAGGAGGAGGACGAAGAAGGAGAAGATGAGGAA 758 Query: 2299 GAAGAAGAAGATGATGATGATGAATAAGTTG-GTT 2332 GA GA GA GATGA GATG TGAA AAG G GTT Sbjct: 759 GACGAGGACGATGAGGATGGTGAAGAAGAGGAGTT 793 Score = 238 (35.7 bits), Expect = 1.1, P = 0.67 Identities = 94/141 (66%), Positives = 94/141 (66%), Strand = Plus / Plus Query: 2191 AAAAAGGGA-GTTGTCAAGGCTGAAAAAAGCAAGAAA-AAGAAGGAAGAGGAGGAAGATG 2248 A AA GGGA G G C A G TGAA AG AG A AAGAAG A GGA GATG Sbjct: 824 AGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGAGGAAGAAGAATTTGGACTT-GATG 882 Query: 2249 AGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAG 2308 A GAAGATGAAGA GA GA GAGGA GA GA GA GAAGAAG TG A G GAA AAG Sbjct: 883 AAGAAGATGAAGATGAGGATGAGGATGAAGAGGAGGAAGAAGGTGGGAAAGGTGAA-AAG 941 Query: 2309 ATGATGATGATGAATAAGTTGGT 2331 A GA GA GA GAA AG TG T Sbjct: 942 AGGAAGA-GA-GAAACAGATGAT 962 Score = 226 (33.9 bits), Expect = 3.9, P = 0.98 Identities = 100/148 (67%), Positives = 100/148 (67%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTTG-TCAAG--GCTGAAAAA-AGCAAGAAAAAGAAGGAAGA 2237 GA G AG A AA GGA TTG T AAG G TGAA A AG A GA A GAAG A GA Sbjct: 858 GAGGAAGAAGAATTTGGACTTGATGAAGAAGATGAAGATGAGGATGAGGATGAAG-AGGA 916 Query: 2238 GGAGGAAGATGAGGAAGATGAA--GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAA 2295 GGA GAAG TG G AAG TGAA GAGGA GAG AG A AG A GATGAAG AGA GA Sbjct: 917 GGAAGAAGGTGGGAAAGGTGAAAAGAGGAAGAG-AGAAACAG-ATGATGAAGGAGAAGAT 974 Query: 2296 GATGAAGAAGA-AGATGATGATGATGAATAAG 2326 GAT AAGA AGATGA TG GAA AG Sbjct: 975 GATTAAGACCCCAGATGACC-TGCAGAAACAG 1005 >AF004294 Mus musculus myelin transcription factor 1 mRNA, complete cds. Length = 5466 Plus Strand HSPs: Score = 332 (49.8 bits), Expect = 7.4e-05, P = 7.4e-05 Identities = 114/160 (71%), Positives = 114/160 (71%), Strand = Plus / Plus Query: 2168 CTAAAGGAAAGCCTGA-TGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAG-CAAGAA 2225 CT AAGGA A T A TG AG A AAG AG G AAGG G A G CA GA Sbjct: 1102 CTGAAGGATATGGTTAGTGAAG-AGTCAAGTAAGCAGA-AAGGA-GTCCTAGGTCATGAG 1158 Query: 2226 AAAGAAGGA-AG-AGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 A GA GGA AG AGGAGGAAGA GA GAAGA GAAGAGGATGAGGAGGAGGAGGA GA Sbjct: 1159 GAGGAGGGAGAGGAGGAGGAAGAAGATGAAGAAGAAGAGGATGAGGAGGAGGAGGAGGAG 1218 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 G AGA GA G AGA GAAGAAGA GA GA GA GA GAA AAG Sbjct: 1219 GGAGAGGAAGGAGAAGAAGAAGAGGAGGAGGAGGAGGAAGAAG 1261 Score = 328 (49.2 bits), Expect = 0.00011, P = 0.00011 Identities = 118/171 (69%), Positives = 118/171 (69%), Strand = Plus / Plus Query: 2179 CCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAA-AA-AAGCAAGAAAAAGA--AGG 2233 C TGA G AG A A GGAG G A A G TGAA AA AAG A GA A GA AGG Sbjct: 1153 CATGAGG-AGGAGGGAGAGGAGGAGGAAGAAGATGAAGAAGAAG-AGGATGAGGAGGAGG 1210 Query: 2234 AAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATG 2293 A GAGGAGG AGA GA G AGA GAAGA GA GAGGAGGAGGAGGAAGA GA GA GA G Sbjct: 1211 AGGAGGAGGGAGAGGAAGGAGAAGAAGAAGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGG 1270 Query: 2294 AAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCAGTTTTT 2346 AAGATGAAGA GAAGA GA GA GA GA AAG G T C A G T TTT Sbjct: 1271 AAGATGAAGAGGAAGAGGAGGAGGAGGAGGAAGCAGCTCCAAATGTTATCTTT 1323 Score = 251 (37.7 bits), Expect = 0.37, P = 0.31 Identities = 89/125 (71%), Positives = 89/125 (71%), Strand = Plus / Plus Query: 2166 AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAAAGCAAG 2223 AG T AAG A AAG GATG AG A A GGAG G A AGG G A AA G AAG Sbjct: 1182 AGATGAAGAAGAAGAG-GATG-AGGAGGAGGAGGAGGAGGGAGAGGAAGGAGAA-G-AAG 1237 Query: 2224 AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 AA A GA GGA GAGGAGGAAGA GAGGA GA GAAGA GA GAGGA GAGGAGGA GA Sbjct: 1238 AAGAGGA-GGAGGAGGAGGAAGAAGAGGAGGAGGAAGATGAAGAGGAAGAGGAGGAGGAG 1296 Query: 2284 GAAGAAG 2290 GA GAAG Sbjct: 1297 GAGGAAG 1303 >AB002381 Human mRNA for KIAA0383 gene, partial cds. Length = 5810 Plus Strand HSPs: Score = 332 (49.8 bits), Expect = 7.4e-05, P = 7.4e-05 Identities = 102/133 (76%), Positives = 102/133 (76%), Strand = Plus / Plus Query: 2197 GGAGTTGTC-AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGA 2255 GGAG TGTC AA G GA A G AAGAA AAGA GGA GAGGAGGA GA GAGGA GA Sbjct: 1528 GGAGCTGTCTAAAGA-GAGCAGTG-AAGAAGAAGA-GGAGGAGGAGGACGAGGAGGAGGA 1584 Query: 2256 TGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA--AG-ATGAAGATGAAGAAGAAGATGA 2312 GAAGAGGA GA GA GAGGA GA GATGAAGA AG A GAAGA GAAGAAGAAGA GA Sbjct: 1585 AGAAGAGGAGGAAGAAGAGGAAGAGGATGAAGAGGAGGAAGAAGAGGAAGAAGAAGAAGA 1644 Query: 2313 TGATGATGAATAAGTT 2328 GA GA GAA A TT Sbjct: 1645 AGAAGAAGAAAATATT 1660 Score = 318 (47.7 bits), Expect = 0.00032, P = 0.00032 Identities = 108/151 (71%), Positives = 108/151 (71%), Strand = Plus / Plus Query: 2172 AGGAAAGCCTGATGCAGCAAA--AAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AGG AGC TG TG AGC AAAG GAG GT AAG GAA A G AG A AG Sbjct: 1516 AGGGCAGC-TGCTGGAGCTGTCTAAAGAGAGCAGTGAAGAA-GAAGAG-G--AGGAGGAG 1570 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 A GA GAGGAGGAAGA GAGGA GA GAAGAGGA GAGGA GA GAGGA GA GAAGA Sbjct: 1571 GACGAGGAGGAGGAAGAAGAGGAGGAAGAAGAGGAAGAGGATGAAGAGGAGGAAGAAGAG 1630 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 GA GAAGA GAAGAAGAAGA GA AT T AA Sbjct: 1631 GAAGAAGAAGAAGAAGAAGAAGAAAATATTCAA 1663 Score = 279 (41.9 bits), Expect = 0.020, P = 0.019 Identities = 83/109 (76%), Positives = 83/109 (76%), Strand = Plus / Plus Query: 2218 AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAG 2277 AG AAGA AAGA GGA GAGGAGGA GA GAGGAAGA GA GA GA GAGGA G GGA Sbjct: 2394 AGGAAGAGGAAGA-GGAGGAGGAGGAGGAAGAGGAAGAAGAGGAAGAAGAGGAAGGGGAA 2452 Query: 2278 GAAGATGAAGAAG-ATGAAGATGAAGAAGAAGATGATGATGATGA-ATAAG 2326 GAAGA GAAG AG A GAA ATG AGAA AAGAT GATG TG A AAG Sbjct: 2453 GAAGAAGAAGGAGGAGGAA-ATGTAGAAAAAGATCCAGATGGTGCTAAAAG 2502 Score = 254 (38.1 bits), Expect = 0.27, P = 0.24 Identities = 90/125 (72%), Positives = 90/125 (72%), Strand = Plus / Plus Query: 2205 CAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAG--GAAGATGAGGAAGATGAAGAG 2262 C AGG TGAAAAA CA GAA A GA A A GA GA GAGGAAGA GA GAG Sbjct: 2357 CCAGG-TGAAAAAC-CA-GAAGATGATCTCATCAAACCTGAGGAAGAGGAAGAGGAGGAG 2413 Query: 2263 GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 GA GAGGA GAGGA GAAGA GAAGAAGA GAAG GAAGAAGAAGA G GA GA GAA Sbjct: 2414 GAGGAGGAAGAGGAAGAAGAGGAAGAAGAGGAAGGGGAAGAAGAAGAAG--GAGGAGGAA 2471 Query: 2323 TAAGTTG 2329 A GT G Sbjct: 2472 -ATGTAG 2477 Score = 232 (34.8 bits), Expect = 2.7, P = 0.94 Identities = 108/167 (64%), Positives = 108/167 (64%), Strand = Plus / Plus Query: 2168 CTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGT-TGTCAAGGCTGAAAAAAGCA--AG- 2223 C A AGGAAA C A G A AAA A G G TGT AAG C AA A A CA AG Sbjct: 2303 CAAGAGGAAAACAGAAGGGAAGAAACATGTGCCCCTGT-AAGTCCAAACACATCACCAGG 2361 Query: 2224 --AAAAAGAAGGAAGAGGAGGAAGATGAGGAA-GATGAAGAGGATGAGGAGGAGGAGGAA 2280 AAAAA AG AAGA GA AT A GA GAAGAGGA GAGGAGGAGGAGGA Sbjct: 2362 TGAAAAACCAG-AAGATGATCTC-ATCAAACCTGAGGAAGAGGAAGAGGAGGAGGAGGAG 2419 Query: 2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 GA GA GAAGA GA GA GAAGA GAAG GA GA GA GAA AG GG Sbjct: 2420 GAAGAGGAAGAAGAGGAAGAAGAGGAAGGGGAAGAAGAAGAAGGAGGAGG 2469 >U70439 Human silver-stainable protein SSP29 mRNA, complete cds. Length = 1475 Plus Strand HSPs: Score = 328 (49.2 bits), Expect = 7.7e-05, P = 7.7e-05 Identities = 94/125 (75%), Positives = 94/125 (75%), Strand = Plus / Plus Query: 2207 AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATG 2266 AGG GAA AA G AGAA A GA GGAAGA GAGGA GATGAGGA G TGAAGA GA G Sbjct: 719 AGGACGAAGAAGG--AGAAGATGA-GGAAGACGAGGACGATGAGGATGGTGAAGAAGAGG 775 Query: 2267 AGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 AG GA GA GAAGATGA GAAGATGAAGATG AGAAG GATGA GA GA GA AAG Sbjct: 776 AGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGGGATGAGGACGACGATGAAG 835 Query: 2327 TTGGT 2331 T GT Sbjct: 836 TCAGT 840 Score = 313 (47.0 bits), Expect = 0.00038, P = 0.00038 Identities = 83/107 (77%), Positives = 83/107 (77%), Strand = Plus / Plus Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GA AAGA GGA GAGGA GAAGA G GAAGATGA GA GA GAGGA GA GAGGA G Sbjct: 706 GATGAAGA-GGAGGAGGACGAAGAAGGAGAAGATGAGGAAGACGAGGACGATGAGGATGG 764 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 TGAAGAAGA GA TGA GAAGAAGATGATGA GATGAA A GT G Sbjct: 765 TGAAGAAGAGGAGTTTGATGAAGAAGATGATGAAGATGAAGATGTAG 811 Score = 286 (42.9 bits), Expect = 0.0068, P = 0.0068 Identities = 110/155 (70%), Positives = 110/155 (70%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTT-G-TCAAG--GCTGAAAAA-AGCAAGAAAAAGAAGGAAG 2236 GATG G A AA AGG AGTT G T AAG G TGA AA A AAGA AGAAGG G Sbjct: 760 GATGGTGAAGAAGAGG-AGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGG-G 817 Query: 2237 AGGAGGAAGATGAGGAAGATGAA-GAGGATGAGGAGGAGGA-GGAA--GATGAAGAAGAT 2292 A GAGGA GA GA GAAG T A GAGGA GA GA GA GGA GATGAAGAAGAT Sbjct: 818 ATGAGGACGACGATGAAG-TCAGTGAGGAGGAAGAAGAATTTGGACTTGATGAAGAAGAT 876 Query: 2293 GAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 GAAGATGA GA GA GATGA GA GA GAA AAG TGG Sbjct: 877 GAAGATGAGGATGAGGATGAAGAGGAGGAAGAAGGTGG 914 Score = 277 (41.6 bits), Expect = 0.018, P = 0.018 Identities = 103/151 (68%), Positives = 103/151 (68%), Strand = Plus / Plus Query: 2172 AGGAAAG-CCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 AGGAA CCTGA CAG AGG G TG GG TGAA A G A GA A GA Sbjct: 668 AGGAAGCACCTGACTCAGATGCCGAGGTGGATGGTGTGGATGAAGAG-G-AGGAGGACGA 725 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 AG AAG GAG AAGATGAGGAAGA GA GA GATGAGGA G GA GAAGA GA G Sbjct: 726 AG-AAG--GAG-AAGATGAGGAAGACGAGGACGATGAGGATGGTGAAGAAGAGGAGTTTG 781 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 ATGAAGA GA GA GAAGATGA GATG GAA Sbjct: 782 ATGAAGAAGATGATGAAGATGAAGATGTAGAA 813 Score = 263 (39.5 bits), Expect = 0.079, P = 0.076 Identities = 119/184 (64%), Positives = 119/184 (64%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAG-CAAAAAAGGGAGTTG 2203 GAAG A AT G TG A AT AG T AG A G TGA G G C A AAG AGT G Sbjct: 784 GAAGAAGAT-GATGAAGATGAAGATGTAGAAGGGGATGAGGACGACGATGAAGTCAGT-G 841 Query: 2204 TCAAGGCTGAAAAAAGCA-AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 AGG GAA AA A A GAAG AAGA GA GA GA GA GA GATGAAGAG Sbjct: 842 AGGAGGAAGAAGAATTTGGACTTGATGAAG-AAGATGAAGATGAGGATGAGGATGAAGAG 900 Query: 2263 GATGAGGA-GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GA GA GA GG GG G AAG TGAA AAGA GAAGA GA GAA AGATGATGA G GA Sbjct: 901 GAGGAAGAAGGTGG-GAAAGGTGAA-AAGAGGAAGA-GA-GAAACAGATGATGAAGGAGA 956 Query: 2322 ATAAGTT 2328 A A G T Sbjct: 957 AGATGAT 963 Score = 251 (37.7 bits), Expect = 0.28, P = 0.25 Identities = 97/150 (64%), Positives = 97/150 (64%), Strand = Plus / Plus Query: 2181 TGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGG 2239 TG TG G AA AGG G G C AAG GA AA A A GAA A GA GGA GA G Sbjct: 699 TGGTGTGGATGAAGAGGAGGAGGACGAAGAAGGAGAAGATGAGGAAGACGA-GGACGATG 757 Query: 2240 AGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATG 2299 AGGA G TGA GAAGA GA GATGA GA GA GA GAAGATGAAGA G GAAG G Sbjct: 758 AGGATGGTGAAGAAGAGGAGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGGG 817 Query: 2300 AAGAAGAAGATGATGATGATGAATAAGTTGG 2330 A GA GA GA GATGA G T A T AG GG Sbjct: 818 ATGAGGACGACGATGAAG-TCAGTGAGGAGG 847 Score = 244 (36.6 bits), Expect = 0.60, P = 0.45 Identities = 70/95 (73%), Positives = 70/95 (73%), Strand = Plus / Plus Query: 2239 GAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGAT 2298 GA G GA G GGA G TG GA GA GAGGAGGAGGA GAAGA G AGAAGATGA GA Sbjct: 685 GATGCCGAGGTGGATGGTGTGGATGAAGAGGAGGAGGACGAAGAAGGAGAAGATGAGGAA 744 Query: 2299 GAAGAAGAAGATGATGATGATGAATAAGTTG-GTT 2332 GA GA GA GATGA GATG TGAA AAG G GTT Sbjct: 745 GACGAGGACGATGAGGATGGTGAAGAAGAGGAGTT 779 Score = 238 (35.7 bits), Expect = 1.1, P = 0.68 Identities = 94/141 (66%), Positives = 94/141 (66%), Strand = Plus / Plus Query: 2191 AAAAAGGGA-GTTGTCAAGGCTGAAAAAAGCAAGAAA-AAGAAGGAAGAGGAGGAAGATG 2248 A AA GGGA G G C A G TGAA AG AG A AAGAAG A GGA GATG Sbjct: 810 AGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGAGGAAGAAGAATTTGGACTT-GATG 868 Query: 2249 AGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAG 2308 A GAAGATGAAGA GA GA GAGGA GA GA GA GAAGAAG TG A G GAA AAG Sbjct: 869 AAGAAGATGAAGATGAGGATGAGGATGAAGAGGAGGAAGAAGGTGGGAAAGGTGAA-AAG 927 Query: 2309 ATGATGATGATGAATAAGTTGGT 2331 A GA GA GA GAA AG TG T Sbjct: 928 AGGAAGA-GA-GAAACAGATGAT 948 Score = 226 (33.9 bits), Expect = 4.1, P = 0.98 Identities = 100/148 (67%), Positives = 100/148 (67%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTTG-TCAAG--GCTGAAAAA-AGCAAGAAAAAGAAGGAAGA 2237 GA G AG A AA GGA TTG T AAG G TGAA A AG A GA A GAAG A GA Sbjct: 844 GAGGAAGAAGAATTTGGACTTGATGAAGAAGATGAAGATGAGGATGAGGATGAAG-AGGA 902 Query: 2238 GGAGGAAGATGAGGAAGATGAA--GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAA 2295 GGA GAAG TG G AAG TGAA GAGGA GAG AG A AG A GATGAAG AGA GA Sbjct: 903 GGAAGAAGGTGGGAAAGGTGAAAAGAGGAAGAG-AGAAACAG-ATGATGAAGGAGAAGAT 960 Query: 2296 GATGAAGAAGA-AGATGATGATGATGAATAAG 2326 GAT AAGA AGATGA TG GAA AG Sbjct: 961 GATTAAGACCCCAGATGACC-TGCAGAAACAG 991 >AL010148 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from contig Length = 4980 Minus Strand HSPs: Score = 331 (49.7 bits), Expect = 8.1e-05, P = 8.1e-05 Identities = 251/409 (61%), Positives = 251/409 (61%), Strand = Minus / Plus Query: 1759 ATGTGGTCTTAAAAAAAAAAGGTAATTTGTCAATAAACATGCAATTAGGTTAAGAAACAT 1700 ATGT GT T AAAAAA A TAAT T AA AAA T A TT TT GA A AT Sbjct: 4533 ATGTTGTTATCAAAAAATTAAATAATATAA-AA-AAAGTTCTACTTTTATTTTGATAAAT 4590 Query: 1699 CTAGAAATAAACACTTTTCAGAATGACTAAAGCTGAAA-ATTAAGTATTTAAT-ATTTCA 1642 TA AAAT A A TTT A A TGA T A T AA ATTAAGTATTT AT AT T A Sbjct: 4591 ATATAAATGATAATATTTAATA-TGAATGATATTATAATATTAAGTATTTTATTATATAA 4649 Query: 1641 ATT-TACTGAACTATAAGAGTTATAGATTTCCTTAATCT-TATTAATTT-ACTGGACAGA 1585 A TA T AA TATA A T ATA ATTT TT A CT TA TAATTT A TGGA A A Sbjct: 4650 AAAATA-T-AA-TATATAA-TAATATATTTTTTTTACCTATAATAATTTTAGTGGAAAAA 4705 Query: 1584 GCAGCAGACTTGTAATTTAACTTAGTGATGCTGTGGTTTT-TTGAGTATCTAAAGGAAAA 1526 AG GA G AATT AA TA AT TGT TTT TT AG ATC A A AA A Sbjct: 4706 AAAGAGGAAA-G-AATT-AATATAAAAATTTTGTTCTTTAGTTAAG-ATCCATAA-AATA 4760 Query: 1525 GA-ACATAAATGTTTCAGGATATGACTA-AGAAAAATATAGCCTATATTACTTTGTCTAG 1468 A A ATA AT T T A ATAT TA A AA AATATA TATATTA T T T TA Sbjct: 4761 TATATATATATATATTAT-ATATATATATATAATAATATATA-TATATTA-TATATATAA 4817 Query: 1467 CCTGTTTTTGTAC----TGTA-TGCCAAGCCAT-TTGAAAA--TGCTCAT-TT-TTGACT 1418 T TT T TAC T TA T AA A TT AAAA T T AT TT TT T Sbjct: 4818 TTTTTTAATATACCCCATATAATAAAAATAAAACTTAAAAAATTTATAATGTTATTTTGT 4877 Query: 1417 TGAAGTGAC-TACCAACATT-TTCATGAACTTC-AAGATACTGGGGAATAACAA-AACCA 1362 TGAAGTGA TA AA AT TT AT AA T AA ATA TG AA A AA AAC A Sbjct: 4878 TGAAGTGATATATTAATATGATTTATTAAATAATAATATA-TGTACAAATAGAAGAACTA 4936 Query: 1361 ACATA 1357 ATA Sbjct: 4937 TAATA 4941 >Z82196 Human DNA sequence from PAC 288L1 Length = 118,595 Minus Strand HSPs: Score = 332 (49.8 bits), Expect = 8.2e-05, P = 8.2e-05 Identities = 110/156 (70%), Positives = 110/156 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATC-TTCTTCATCTTCCTCCTCCTCC 2268 CTT TC TC TC TCAT TCTTC TC TC TC TC TTCT C TC TCCTCCTCCTCC Sbjct: 48218 CTTCCTCCTCCTCCTCATTCTCTTCCTCCTCCTCCTCATTCT-CTTCCTCCTCCTCCTCC 48276 Query: 2267 TCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCC 2208 TCAT CTCTTC TC TC T TCTTCCTCCTC TCCTTCTT T CT CT TT C CC Sbjct: 48277 TCATTCTCTTCCTCCTCATTCTCTTCCTCCTCCTCCTTCTTCTCCTC-CTACTT-CT-CC 48333 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTT 2171 TT C C CCT TTT CT C TC CT T CTT Sbjct: 48334 TTCTCTCCCTCCTCTTTCTCTTCCTCCTCCTCTTCTT 48370 Score = 311 (46.7 bits), Expect = 0.00074, P = 0.00074 Identities = 115/162 (70%), Positives = 115/162 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATC-TTCTTCTTCATCTTCATCTTC-TTCATCTTCCTCCTCCTC 2269 C T TTC TC TC TC TC TTCT CTTC TC TC TC TC TTC TCTTCCTCCTCCTC Sbjct: 48194 CCTCTTCCTCCTCCTCCTCATTCT-CTTCCTCCTCCTCCTCATTC-TCTTCCTCCTCCTC 48251 Query: 2268 CTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCT-TGCTTTTTTCAG 2210 CTCAT CTCTTC TC TCCTC TC TC T CTCTTCCT CT TTCT T C T T C Sbjct: 48252 CTCATTCTCTTCCTCCTCCTCCTCCTCATTCTCTTCCTCCTCATTCTCTTCCTCCTCCT- 48310 Query: 2209 CCTTGACAACTCC-CTTTTTTGCTGCATCAGGCTTTCCTTTAGCTC 2165 CCTT C CTCC C T TT CT C TC C TCCT T CTC Sbjct: 48311 CCTT--CTTCTCCTCCTACTT-CTCCTTCTCTCCCTCCTCTTTCTC 48353 Score = 310 (46.5 bits), Expect = 0.00082, P = 0.00082 Identities = 104/143 (72%), Positives = 104/143 (72%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 C T TTC TC TC TC TC TC TCTTC TC TC TC TC C TCTTCCTCCTCCTCCT Sbjct: 48362 CCTCTTCTTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCCCCTCTTCCTCCTCCTCCT 48421 Query: 2266 CATCC-TCTTCATCTTCCTC-ATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAG 2210 C TCC TCT C TC TCCTC ATCT CCTCCTCTTCCT CT T CT CT T TC Sbjct: 48422 CCTCCATCTCC-TCCTCCTCCATCT-CCTCCTCTTCCTCCTCCTCCTC-CTCCTCCTCCT 48478 Query: 2209 CCTTGACAACTCCCTTTTT-TGCTGC 2185 CCTT C C CCTTTT TGCTGC Sbjct: 48479 CCTTCTCCTCCTCCTTTTGCTGCTGC 48504 Score = 303 (45.5 bits), Expect = 0.0017, P = 0.0017 Identities = 115/167 (68%), Positives = 115/167 (68%), Strand = Minus / Plus Query: 2337 GCTAGAACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTC 2278 GCTA C CTT TC TC TC TC TCTTC TC TC TC TCAT TCTTC TC TC Sbjct: 48169 GCTATGTCTTTCTTCCTC-TCCTCCTCCTCTTCCTCCTCCTCCTCATTCTCTTCCTCCTC 48227 Query: 2277 CTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCT-TGC 2219 CTCCTC T CTC TCCTC TC TC TC T TCTTCCTCCTC TCCT CT TTCT T C Sbjct: 48228 CTCCTCATTCTCTTCCTCCTCCTCCTCATTCTCTTCCTCCTCCTCCTCCTCATTCTCTTC 48287 Query: 2218 TTTTTTCAGCCT-TGACAACTCC-CTTTTTTGCTGCATCAGGCTT-TCCTT 2171 T T CA CT T C CTCC C TT TT CT C TC CTT TCCTT Sbjct: 48288 CTCCT-CATTCTCTTCCTCCTCCTCCTTCTT-CTCC-TCCTACTTCTCCTT 48335 Score = 290 (43.5 bits), Expect = 0.0067, P = 0.0067 Identities = 130/197 (65%), Positives = 130/197 (65%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCA-TCA-TCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCT 2273 CC ACTT T C TC TC TC TCTT TCTTC TC TC TCTTCTTC TC TCCTCCT Sbjct: 48323 CCTACTTCTCCTTCTCTCCCTCCTCTTTCTCTTCCTCCTCCTCTTCTTCCTCCTCCTCCT 48382 Query: 2272 CCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCT--TGCTTTT 2215 CCTC TC TCCTC TC TC CCTC TC TCCTCCTC TCCT C T T CT T CT Sbjct: 48383 CCTCTTCCTCCTCCTCCTCCCCCTCTTCCTCCTCCTCCTCCTCCATCTCCTCCTCCTCCA 48442 Query: 2214 T-TCAGCCT-TGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTCGATATGC 2158 T TC CCT T C CTCC T T CT C TC CTT TCCT CTC T TGC Sbjct: 48443 TCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCC-TCCTCCTTCTCCTC---CTCCTTTTGC 48498 Query: 2157 AGCAATATCCTTCCAAAGCAAA 2136 GC T TT CA AG AAA Sbjct: 48499 TGCTGC-TGTTTGCACAGAAAA 48519 Score = 280 (42.0 bits), Expect = 0.019, P = 0.019 Identities = 82/109 (75%), Positives = 82/109 (75%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCAT-CTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC 2272 CC CT TTC TC TC TC T CTTCT CTTC TCT C TC TCTT TCTTCCTCCTC Sbjct: 48305 CCTCCTCCTTCTTC-TCCTCCTACTTCTCCTTC-TCTCCCTCCTCTTTCTCTTCCTCCTC 48362 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCT 2222 CTC TC TCCTC TC TC TCCTC TC TCCTCCTC TCC CT TT CT Sbjct: 48363 CTCTTCTTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCCCCTCTTCCT 48412 Score = 273 (41.0 bits), Expect = 0.040, P = 0.039 Identities = 123/186 (66%), Positives = 123/186 (66%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATC-TTCTTCTTCATCTTCATC-TTCTTCATCTTCCTCCT 2273 CC CT ATTC TC TC TC TC TTCT CTTC TC TC TC TTCTTC TC TCCT CT Sbjct: 48272 CCTCCTCATTC-TCTTCCTCCTCATTCT-CTTCCTCCTCCTCCTTCTTC-TCCTCCTACT 48328 Query: 2272 CCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-T 2214 CTCCT TC C TC TCTT CTC TC TCCTCCTCTTC TTC T TC T CT T T Sbjct: 48329 TCTCCTTCTCTCCCTCCTCTTTCTCTTCCTCCTCCTCTTC-TTCCTCCTCCTCCTCCTCT 48387 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCA 2154 TC CCT C CTCCC T TT CT C TC CT CCT A CTC T C CA Sbjct: 48388 TCCTCCTCCTC--CTCCCCCTCTTCCTCC-TCCTCCT--CCTCCATCTCCTCCTCCTCCA 48442 Query: 2153 ATATCCTTC 2145 T TCCT C Sbjct: 48443 -TCTCCTCC 48450 Score = 255 (38.3 bits), Expect = 0.26, P = 0.23 Identities = 89/120 (74%), Positives = 89/120 (74%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATC-TTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCC 2268 CTT TC TC TC TC TC TTCT CTTC TC TCAT TCTTC TC TCCTCCT CT C Sbjct: 48260 CTTCCTCCTCCTCCTCCTCATTCT-CTTCCTCCTCATTCTCTTCCTCCTCCTCCTTCTTC 48318 Query: 2267 TCATCCT-CTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAG 2210 TC TCCT CTTC CTTC TC TC CCTCCTCTT CT CTT TC T CT TT TTC Sbjct: 48319 TCCTCCTACTTCTCCTTC-TC-TC--CCTCCTCTTTCT-CTTCCTCCTCCTCTTCTTCCT 48373 Query: 2209 CCT 2207 CCT Sbjct: 48374 CCT 48376 >AC002287 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-237H1 ~complete Length = 188,636 Plus Strand HSPs: Score = 332 (49.8 bits), Expect = 8.2e-05, P = 8.2e-05 Identities = 114/158 (72%), Positives = 114/158 (72%), Strand = Plus / Plus Query: 2213 AAAAAAGCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 AAAAAAG AAGAA AAGAA GAAGAGGA GAAGA GA GAAGA GAAGA GA GA GA Sbjct: 80989 AAAAAAG-AAGAAGAAGAACAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 81047 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG- 2329 GA GA GAAGA GAAGAAGA AAGA GAAGAAGAAGA GA GA GA GA A G G Sbjct: 81048 AGAAGAAGAAGAAGAAGAAGAATAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGA 81107 Query: 2330 GTTCTAGCGCAGTTTTTTTTTTCT--T-GTCT-ATAAAGC 2365 G AG G AG T TTT TC T GT T ATAAAGC Sbjct: 81108 GGAGGAG-GAAGAAATGTTTCTCAAATAGTTTTATAAAGC 81146 Score = 321 (48.2 bits), Expect = 0.00026, P = 0.00026 Identities = 89/116 (76%), Positives = 89/116 (76%), Strand = Plus / Plus Query: 2206 AAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 AA G GAA AA A CAAGAA A GAAG AAGA GA GAAGA GA GAAGA GAAGA GA Sbjct: 80992 AAAGAAGAAGAAGAACAAGAAGAGGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 81050 Query: 2265 TGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GA GA GA GA GAAGA AAGAAGA GAAGA GAAGAAGAAGA GA GA GA GA Sbjct: 81051 AGAAGAAGAAGAAGAAGAATAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGA 81107 Score = 290 (43.5 bits), Expect = 0.0067, P = 0.0067 Identities = 100/144 (69%), Positives = 100/144 (69%), Strand = Plus / Plus Query: 2183 ATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG-AAGGAAGAGGAG 2241 ATGCA A A AGG TT CA G CT A AAG A G A AG AA AAGA GA Sbjct: 80945 ATGCAA-AGAGCAGGTTATTTACA-GACTCCTAGAAG-A-GTTAGAGCAAAAAAGAAGAA 81000 Query: 2242 GAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAA 2301 GAAGA A GAAGA GAAGA GA GA GA GA GA GAAGA GAAGAAGA GAAGA GAA Sbjct: 81001 GAAGAACAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 81060 Query: 2302 GAAGAAGATGATGATGATGAATAAG 2326 GAAGAAGA A GA GA GAA AAG Sbjct: 81061 GAAGAAGAATAAGAAGAAGAAGAAG 81085 Score = 261 (39.2 bits), Expect = 0.14, P = 0.13 Identities = 107/158 (67%), Positives = 107/158 (67%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAA-AA-AAGCAAGAAAA 2227 AAG A A C GA G AG AA AA A G AG G A G GAA AA AAG AAGAA A Sbjct: 80999 AAGAAGAACAAGAAG-AGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG-AAGAAGA 81056 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGAAG AAGA GA AAGA GA GAAGA GAAGA GA GAGGAGGAGGAGGA GA GA G Sbjct: 81057 AGAAG-AAGAAGAATAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGG 81115 Query: 2288 AAGATGAAGATGAAGAAGAAGATG-ATGATGAT-GAATAAGT 2327 AAGA A G T AA AG T AT A G T G ATAA T Sbjct: 81116 AAGAA-ATGTTTCTCAAATAGTTTTATAAAGCTAGCATAACT 81156 Score = 258 (38.7 bits), Expect = 0.19, P = 0.18 Identities = 88/129 (68%), Positives = 88/129 (68%), Strand = Plus / Plus Query: 2201 TTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGA-AGAT-GAGGAAGAT-G 2257 TTGT AA TG AAA AGCA G A A GA AG A AG T GAG AA A G Sbjct: 80936 TTGTTAAACATGCAAAGAGCAGGTTATTTACAGACTCCTAGAAGAGTTAGAGCAAAAAAG 80995 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 AAGA GA GA A GA GAGGAAGA GAAGAAGA GAAGA GAAGAAGAAGA GA GA G Sbjct: 80996 AAGAAGAAGAACAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG 81055 Query: 2318 ATGAATAAG 2326 A GAA AAG Sbjct: 81056 AAGAAGAAG 81064 >L13297 Rattus norvegicus tandem repeat mRNA. Length = 138 Plus Strand HSPs: Score = 285 (42.8 bits), Expect = 8.2e-05, P = 8.2e-05 Identities = 71/87 (81%), Positives = 71/87 (81%), Strand = Plus / Plus Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GAA AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA Sbjct: 1 GAAGAAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 59 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGA 2309 GAAGAAGA GAAGA GAAGAAGAAGA Sbjct: 60 AGAAGAAGAAGAAGAAGAAGAAGAAGA 86 Score = 285 (42.8 bits), Expect = 8.2e-05, P = 8.2e-05 Identities = 73/93 (78%), Positives = 73/93 (78%), Strand = Plus / Plus Query: 2233 GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGAT 2292 ||||| || ||||| || ||||| ||||| || || || || || ||||| |||||||| Sbjct: 1 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 60 Query: 2293 GAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 ||||| ||||||||||| || || || || || Sbjct: 61 GAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAA 93 Score = 282 (42.3 bits), Expect = 0.00011, P = 0.00011 Identities = 76/99 (76%), Positives = 76/99 (76%), Strand = Plus / Plus Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAA Sbjct: 2 AAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 60 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GAAGA GAAGA GAAGAAGAAGA GA A A AA AA Sbjct: 61 GAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAAAAA 99 Score = 281 (42.2 bits), Expect = 0.00013, P = 0.00013 Identities = 75/97 (77%), Positives = 75/97 (77%), Strand = Plus / Plus Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGA Sbjct: 1 GAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 59 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 AGA GAAGA GAAGAAGAAGA GA GA A AA AA Sbjct: 60 AGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAA 96 Score = 272 (40.8 bits), Expect = 0.00032, P = 0.00032 Identities = 68/85 (80%), Positives = 68/85 (80%), Strand = Plus / Plus Query: 2242 GAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAA 2301 ||||| || ||||| ||||| || || || || || ||||| |||||||| ||||| ||| Sbjct: 1 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 60 Query: 2302 GAAGAAGATGATGATGATGAATAAG 2326 |||||||| || || || ||| ||| Sbjct: 61 GAAGAAGAAGAAGAAGAAGAAGAAG 85 >X86100 R.norvegicus BSP gene Length = 5286 Minus Strand HSPs: Score = 330 (49.5 bits), Expect = 9.1e-05, P = 9.1e-05 Identities = 110/157 (70%), Positives = 110/157 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TC TC TC TCATCTTC C TC TCTTC TC TCTTC TC C T CTCCTCCT Sbjct: 4015 CTTCCTCTTCCTCCTCATCTTCCACCTCCTCTTCCTCCTCTTCCTCCCCTTTCTCCTCCT 4074 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCT 2207 C TCCTCTTC C TCCTC TC CCTCCTCTTCCT CT TT CTT CT TT C CCT Sbjct: 4075 CTTCCTCTTCCACCTCCTCTTCCACCTCCTCTTCCTCCTCTT-CTTCCTCTTCCCCTCCT 4133 Query: 2206 -TGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTT 2170 T C CTCC TT T CT C TC CT TCCTTT Sbjct: 4134 CTTCCTCCTCCTCTTCCTCCTCC-TCTTCCTCCTCCTTT 4171 Score = 317 (47.6 bits), Expect = 0.00036, P = 0.00036 Identities = 111/158 (70%), Positives = 111/158 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCT--TCCTCCTCCTC 2269 C T TTC TC TC TC CTTCTTC TC CTTC TC TCTTC CT TCCTCCTC TC Sbjct: 4286 CCTCTTCCTCTTCTTCCACTTCTTCCTCCCCTTCCTCCTCTTCCCCTCCTCCTCCTCTTC 4345 Query: 2268 CTCATCC-TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCA 2211 CTC CC TC TC TCTTCCTC TCTTCCTCCTCTTCCT CT TT CT CT T TTC Sbjct: 4346 CTCCCCCATCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTC-CTCCTCTTCT 4404 Query: 2210 GCCTTGACAACTCCCTTTTTTGCTGCATCAGGCT-TTCCT 2172 CCT CA CTCCC T T C C TC CT TTCCT Sbjct: 4405 TCCTCCCCATCTCCCCCCTCTTCCCC-TCCCCCTCTTCCT 4443 Score = 306 (45.9 bits), Expect = 0.0011, P = 0.0011 Identities = 102/142 (71%), Positives = 102/142 (71%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TC TC TC TC TC TCTTCTTC TC CATCT C C TCTTCC CCTCC CCT Sbjct: 4379 CTTCCTCCTCTTCCTCCTCCTCTTCTTCCTCCCCATCTCCCCCCTCTTCC-CCTCCCCCT 4437 Query: 2266 CATCCTCTTC-ATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCC 2208 C TCCTC C ATCTTCCTC TTCCTCCTCTTCCT CT TT CT C TTT TC CC Sbjct: 4438 CTTCCTCCCCCATCTTCCTC---TTCCTCCTCTTCCTCCTCTTCCTCCCCTTTCTCCTCC 4494 Query: 2207 T-TGACAACTCCCTTTTTTGCTGC 2185 T T C CTCC TT TT CT C Sbjct: 4495 TCTTCCTCCTCCTCTTCTTCCTCC 4518 Score = 292 (43.8 bits), Expect = 0.0049, P = 0.0049 Identities = 114/162 (70%), Positives = 114/162 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC C TC TCTTC TC TC TC TC TC TC TCTTCCTCCTCCT T Sbjct: 4114 CTTCTTCCTCTTCCCC-TCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTTTT 4172 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCT-TCCTTCTTT-T-TCTTGCTTTT-TTCA 2211 C TCC CT CATC TCCTC TCTTC TCCTC TCCT CTT T TCTT CT T TTC Sbjct: 4173 CTTCCCCTCCATCCTCCTCTTCTTC-TCCTCCCTCCT-CTTCCTCTCTTCCTCCTCTTCC 4230 Query: 2210 GCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTC 2165 CCTT C C C CTT TT CT CATC C TCCT T CTC Sbjct: 4231 TCCTTCTCTTC-CTCTTCCTT-CT-CATCTTCCACCTCCTCTTCCTC 4274 Score = 291 (43.7 bits), Expect = 0.0055, P = 0.0055 Identities = 97/132 (73%), Positives = 97/132 (73%), Strand = Minus / Plus Query: 2337 GCTAGAAC-CAAC-TTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCT 2280 GCTA AA CAAC TT TTCA TC TC TC TCTTC TC TC TC TC TCTTC TCT Sbjct: 3889 GCTATAAAGCAACATTCTTCAAGTTCCTCCTCCTCTTCCTCTTCCTCCTCCTCTTCCTCT 3948 Query: 2279 TCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC-CTTCTTTTTCTT 2221 TCCTC TC TCCTC CCTCT C TCTTCCT TC TCCTC TC TC CTTC T TCTT Sbjct: 3949 TCCTCTTCTTCCTC--CCTCTCC-TCTTCCTTCTCCTCCTCTTCCTCTCTTCCTCCTCTT 4005 Query: 2220 GCTTTTT-TCAGCCT 2207 CT TT TC CCT Sbjct: 4006 CCTCCTTCTCTTCCT 4020 Score = 287 (43.1 bits), Expect = 0.0084, P = 0.0083 Identities = 105/152 (69%), Positives = 105/152 (69%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC TC TC TC TCTTCTTC TC CATCT C C TCTTCC CCTCC CCTC T C Sbjct: 4492 TCCTCTTCCTCCTCCTCTTCTTCCTCCCCATCTCCCCCCTCTTCC-CCTCCCCCTCTTTC 4550 Query: 2261 TCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCTTGA-C 2203 TC C C TCCTC TCTTCCTCCTCTTCCT CT TT CTT C T TC CTT C Sbjct: 4551 TCCCC--CATCCTCCTCTTCCTCCTCTTCCTCCTCTT-CTTCCCCATCTCCCTCTTCTTC 4607 Query: 2202 AACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTT 2170 CTCCCT T TT CT C TC CT TCCT T Sbjct: 4608 CCCTCCCTGTCTTCCTCC-TCTTCCTCCTCCTCT 4640 Score = 285 (42.8 bits), Expect = 0.010, P = 0.010 Identities = 91/124 (73%), Positives = 91/124 (73%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCC 2271 CC CTT T C TC TC TC TCTTC CTTC TC TC CTTC TC TCTTCC CCTCC Sbjct: 4277 CCTTCTTCTCC-TCTTCCTCTTCTTCCACTTCTTCCTCCCCTTCCTCCTCTTCC-CCTCC 4334 Query: 2270 TCCTCATCCTCTTCATCT-TCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-T 2213 TCCTC TC TC TC C TCCTC TCTTCCTCCTCTTCCT CT TT CT CT TT T Sbjct: 4335 TCCTCCTCTTCCTCCCCCATCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTC-CTCTTCCT 4393 Query: 2212 CAGCCT 2207 C CCT Sbjct: 4394 CCTCCT 4399 Score = 285 (42.8 bits), Expect = 0.010, P = 0.010 Identities = 109/166 (65%), Positives = 109/166 (65%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCC 2271 CCA CTT TC TC TC TC TC TC TCTTC TC C T TC TC TCTTCCTCCTCC Sbjct: 4447 CCATCTTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCCCTTTCTCCTCCTCTTCCTCCTCC 4506 Query: 2270 TCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT--T 2213 TC TC TCCTC CATCT CC C TCTTCC CCTC CCT CTTT TC C T T T Sbjct: 4507 TCTTCTTCCTCCCCATCTCCCCCCTCTTCC-CCTCCCCCT-CTTTCTCCCCCATCCTCCT 4564 Query: 2212 CAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTC 2165 C CCT C C CCT TT T C CATC CT T CTT CTC Sbjct: 4565 CTTCCTCCTCTTCCTCCTCTTCTTCCCCATCTCCCTCTTCTTCCCCTC 4612 Score = 284 (42.6 bits), Expect = 0.011, P = 0.011 Identities = 110/162 (67%), Positives = 110/162 (67%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTC-TTCATCTTCATCTTCTTCATCTTCCTCCTCCTCC 2268 CTT TC TC TC TC TCTTC TC TTC TCTTC TCTTC TC TC TC TCC CCTCC Sbjct: 3986 CTTCCTC-TCTTCCTCCTCTTCCTCCTTC-TCTTCCTCTTCCTCCTCATCTTCCACCTCC 4043 Query: 2267 TCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCC 2208 TC TCCTC TC TC TCC C T TCCTCCTCTTCCT CTT C T CT TT CA CC Sbjct: 4044 TCTTCCTCCTCTTCCTCCCCTTTCTCCTCCTCTTCCT-CTTCCACCTCCTCTTC-CA-CC 4100 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTC 2165 T C CT CCT T T CT C TC C TCCT T CTC Sbjct: 4101 TC--CT-CTTCCTCCTCTTCTTCCTCTTCCCCTCCTCTTCCTC 4140 Score = 283 (42.5 bits), Expect = 0.013, P = 0.013 Identities = 99/140 (70%), Positives = 99/140 (70%), Strand = Minus / Plus Query: 2304 TTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATC 2245 TTCTTCA TTC TC TC TC TC TC TCCTCCTCCTC TCCTCTTC TCTTC TC TC Sbjct: 3903 TTCTTCAAGTTCCTCCTCCTCTTCCTCTTCCTCCTCCTCTTCCTCTTCCTCTTCTTCCTC 3962 Query: 2244 TTCCTCCTCTTCCTTCTTTT--TCTTGCTTTTTTCAGCCTTGACAACTCCCTTTTTTGCT 2187 CTCCTCTTCCTTCT T TCTT CT T TTC CCT C CTCC T T TT CT Sbjct: 3963 CCTCTCCTCTTCCTTCTCCTCCTCTTCCTCTCTTCCTCCTCTTC--CTCCTTCTCTTCCT 4020 Query: 2186 GCATCAGGCTTTCCTTT-AGCTC 2165 C TC CT CTT A CTC Sbjct: 4021 -CTTCCTCCTCATCTTCCACCTC 4042 Score = 278 (41.7 bits), Expect = 0.022, P = 0.021 Identities = 106/151 (70%), Positives = 106/151 (70%), Strand = Minus / Plus Query: 2317 CATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTT 2258 CATC TC TCTTCTTCT C C TC TCTTC TC TCTTCCTCCTC TCCTC T CTCTT Sbjct: 4182 CATCCTCCTCTTCTTCTCCTCCCTCCTCTTCCTC-TCTTCCTCCTCTTCCTCCTTCTCTT 4240 Query: 2257 CATCTTCCT---CATCTTCC---TCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCCTTG 2205 C TCTTCCT CATCTTCC TCCTCTTCCT C TTCTT CT T TTC C T Sbjct: 4241 CCTCTTCCTTCTCATCTTCCACCTCCTCTTCCTCCCCCTTCTT-CTCCTCTTCCTCTTCT 4299 Query: 2204 ACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTT 2171 C ACT C T T CT C TC CTT CC T Sbjct: 4300 TCCACTTCTTCCTCCCCTTCCTCCT-CTTCCCCT 4332 Score = 269 (40.4 bits), Expect = 0.056, P = 0.054 Identities = 107/160 (66%), Positives = 107/160 (66%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTC-ATCTTCTTCATCTTCCTCCTC 2272 CCA CT C TC TC C TC C TCTTC TC C ATCTTC TC TC TCCTC TC Sbjct: 4411 CCATCTCCCCCCTCTTCCCC-TCCCCCTCTTCCTCCCCCATCTTCCTCTTCCTCCTCTTC 4469 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTC 2212 CTCCTC TCCTC C T TCCTC TCTTCCTCCTC TC TTCTT TC C T T C Sbjct: 4470 CTCCTCTTCCTCCCCTTTCTCCTCCTCTTCCTCCTCCTC-TTCTTCCTCCC-CATCTCCC 4527 Query: 2211 AGC-CTTGACAACTCCCTTTTT-TGCTGCATCAGGCT-TTCCT 2172 C CTT C C CCCT TTT T C CATC CT TTCCT Sbjct: 4528 CCCTCTTCCCCTCCCCCTCTTTCTCCCCCATCCTCCTCTTCCT 4570 Score = 268 (40.2 bits), Expect = 0.062, P = 0.060 Identities = 96/137 (70%), Positives = 96/137 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TC TC TC TC C TCT C TC TCTTC CT C T TCTTCCTCCTC TCCT Sbjct: 4574 CTTCCTCCTCTTCTTCCCCATCTCCCTCTTCTTCCCCTCCCTG-TCTTCCTCCTCTTCCT 4632 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCT-TCTTTTTCTTGCTTTT--TTCAG 2210 C TCCTCTTC CT CC C TCTTCCTC TCTTCC TCTT TCTT CT T TTC Sbjct: 4633 CCTCCTCTTCCCCTCCCCC-TCTTCCTCTTCTTCCCCTCTTCCTCTTCCTCCTCCTTCCT 4691 Query: 2209 CCTTGACAACTCCCTTTTTT 2190 C TTG C A T TTT TT Sbjct: 4692 CATTG-CTATTGTTTTTGTT 4710 Score = 268 (40.2 bits), Expect = 0.062, P = 0.060 Identities = 104/152 (68%), Positives = 104/152 (68%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCT-TCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATC 2263 TC TC TC TC C TC TC TC TC TC TCTTC TC TCTTCCTCCTC TCCTC TC Sbjct: 4338 TCCTCTTCCTCCCCCATCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTC 4397 Query: 2262 CTCTTCATCTTCCTCATCTTCCTCCTCTTCCT-TCTTTTTCTTGCTTTTTTCAGCCTTGA 2204 CTCTTC TC TCC CATCT CC CCTCTTCC TC TCTT CT CA C TT Sbjct: 4398 CTCTTCTTCCTCCCCATCTCCCCCCTCTTCCCCTCCCCCTCTTCCTCCCC-CATC-TTC- 4454 Query: 2203 CAACTCCCTTTT-TTGCTGCATCAGGCTTTCCTTT 2170 C CT CCT T TT CT C TC CT CCTTT Sbjct: 4455 CT-CTTCCTCCTCTTCCTCC-TCTTCCTCCCCTTT 4487 Score = 253 (38.0 bits), Expect = 0.30, P = 0.26 Identities = 87/124 (70%), Positives = 87/124 (70%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC TC TC TCTTC TC TC TC TC T TCTTC TCTTCCT CTC TC TC CC Sbjct: 4205 TCCTCTTCCTC-TCTTCCTCCTCTTCCTCCTTCTCTTCCTCTTCCTTCTCATCTTCCACC 4263 Query: 2261 TCTTCATCTTCCTCAT-CTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCTTGAC 2203 TC TC TC TCC C T CTTC TCCTCTTCCT CTT TTC CTT TT C CC T C Sbjct: 4264 TCCTCTTCCTCCCCCTTCTTC-TCCTCTTCCT-CTTCTTCCA-CTTCTTCCTCCCCTTCC 4320 Query: 2202 AACTC 2198 CTC Sbjct: 4321 TCCTC 4325 Score = 244 (36.6 bits), Expect = 0.77, P = 0.54 Identities = 102/156 (65%), Positives = 102/156 (65%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TC TC T TCATCTTC C TC TCTTC TC C T TCTTC TCCTC TCCT Sbjct: 4238 CTTCCTCTTCCTTCTCATCTTCCACCTCCTCTTCCTCCCCCT--TCTTC-TCCTCTTCCT 4294 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCT-TCTTTTTCTTGCTTTTTTCAGCC 2208 C TC TC C TCTTCCTC CTTCCTCCTCTTCC TC T TC T CTT T C C Sbjct: 4295 CTTCTTCCACTTCTTCCTCCCCTTCCTCCTCTTCCCCTCCTCCTCCT-CTTCCTCCCCCA 4353 Query: 2207 TTGACAACTCCCTTTT-TTGCTGCATCAGGCTTTCCTT 2171 T C CT CCT T TT CT C TC CT CTT Sbjct: 4354 TCCTCCTCTTCCTCCTCTTCCTCC-TCTTCCTCCTCTT 4390 >AF015725 Homo sapiens chromosome 21q22.2 cosmid clone D68F9, complete Length = 36,563 Minus Strand HSPs: Score = 330 (49.5 bits), Expect = 0.00010, P = 0.00010 Identities = 138/192 (71%), Positives = 138/192 (71%), Strand = Minus / Plus Query: 2339 GCGCTAGA-ACCAACTTATTCATCA-TCATCATCTTCTTCTTCATCTTCATCTTCTTCAT 2282 GC C AGA A CA CT ATTC C TC TCA CTTCTT TTC TCTTC TCTTCT C Sbjct: 14132 GCACAAGACATCATCT-ATTCCCCCCTCCTCACCTTCTT-TTCCTCTTCCTCTTCT-C-- 14186 Query: 2281 CTTCCTCCTC-CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTT-C-CTTCTTTT 2225 CTTCCTC TC CTCCTC TCCTCTTC TCTTCCTC TCTTCCTC TCTT C CTTC TT Sbjct: 14187 CTTCCTC-TCTCTCCTCCTCCTCTTCTTCTTCCTCTTCTTCCTCATCTTACTCTTCCCTT 14245 Query: 2224 TC-T-TGCTTTT-TTCAGCCT-TGACAAC-TCCCTTTTTTGCTGCATCAGGCT-TTCCTT 2171 TC T T CT TT TTC CCT T C C TCCCT T CT CAT CT TT CT Sbjct: 14246 TCCTCTTCTCTTGTTCTTCCTCTCCCTCCCTCCCTCCCTCCCTCCATTGTTCTCTTTCTC 14305 Query: 2170 -TAGCTCGAT--ATGCAG 2156 TA CTC AT A GCAG Sbjct: 14306 CTATCTCCATGAAGGCAG 14323 >AF027865 Mus musculus Major Histocompatibility Locus class II region. Length = 138,187 Minus Strand HSPs: Score = 330 (49.5 bits), Expect = 0.00010, P = 0.00010 Identities = 122/178 (68%), Positives = 122/178 (68%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCC 2271 CC CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC Sbjct: 28201 CCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 28260 Query: 2270 TCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCA 2211 TC TC TC TCTTC TCTTC TC T TCCTCCTCT CCT CTT T CT CT T C Sbjct: 28261 TCTTCTTCTTCTTCTTCTTCTTCCTTCTCCTCCTCTCCCTCCTTCTCCTC-CTCCTC-CT 28318 Query: 2210 GCCTTGACAACTCCCTTTTTTG--CTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAA 2153 CCTTG CA C CTT T TG CT CA GGCT C TT A C G AT C G AA Sbjct: 28319 -CCTTGCCA-CGAGCTTCTCTGGCCTCCAGG-GGCTGACGTTCACCCTGC-ATCCTGGAA 28374 >AC003664 Homo sapiens chromosome 17, clone hCIT54K19, complete sequence. Length = 202,233 Minus Strand HSPs: Score = 330 (49.5 bits), Expect = 0.00010, P = 0.00010 Identities = 112/152 (73%), Positives = 112/152 (73%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTC-TTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATC 2263 TC TC TC T TC TCTTC TTC TCTTC TCTTCTTC TCTTC TCCTCCTCCTC TC Sbjct: 75285 TCCTCCTCTTTCTCCTCTTCCTTCTTCTTCTTCTTCTTCTTCTTC-TCCTCCTCCTCCTC 75343 Query: 2262 CTCTTCATCTTCCTCAT-CTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCCTTG 2205 CTC TC TC TCCTC T CTTC TC TCTTC TTCTT TTCTT CTT TT TC CCT Sbjct: 75344 CTCCTCCTCCTCCTCCTTCTTCTTCTTCTTC-TTCTTCTTCTT-CTTCTTCTCCTCCTCC 75401 Query: 2204 ACAACTCCCTTTT-TTGCTGCATCAGGCTT-TCCTT 2171 C CT CT T TT CT C TC CT TCCTT Sbjct: 75402 TCCTCTTTCTCCTCTTCCTTC-TCCTCCTCCTCCTT 75436 Score = 329 (49.4 bits), Expect = 0.00011, P = 0.00011 Identities = 91/117 (77%), Positives = 91/117 (77%), Strand = Minus / Plus Query: 2321 TCATCATCAT-CATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATC 2263 TC TC TC T C TCTTCTTCTTC TCTTC TCTTCTTC TCT CCTCCTCCTCCTC T Sbjct: 75351 TCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT-CCTCCTCCTCCTCTTT 75409 Query: 2262 CTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCCTT 2206 CTC TC TC T CTC TC TCCTCCT TCCTTCT TTCTT CT TT TTC G TT Sbjct: 75410 CTCCTCTTCCTTCTCCTCCTCCTCCTTCTCCTTCTCCTTCTTCCTCTTCTTCTGTTTT 75467 Score = 307 (46.1 bits), Expect = 0.0011, P = 0.0011 Identities = 129/193 (66%), Positives = 129/193 (66%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCAT-CATCTTCTTCTTCATCTTCATCTTCT--TCATCTTCCTCCTCCT 2270 CTT TC TC TC T C TCTTCTTCTTC TCTTC TCT CT TC TC TCCTCCTCCT Sbjct: 75292 CTTTCTCCTCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCT 75351 Query: 2269 CCTCATCCT-CTTCATCTTCCTCATCTTCCTCCTCTTCCT-TCTTTTTCTTGCT-TTT-T 2214 CCTC TCCT CTTC TCTTC TC TCTTC TC TCTTC T TC T TC T CT TTT T Sbjct: 75352 CCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCTTTCT 75411 Query: 2213 --TCAGCCTTGACAACTCCCTTTTT-TGCTGCATCAGGCTTTC-CTTTAGCTCGATATGC 2158 TC CCTT C C CCT TT T CT C TC CTT C CTT CT T T Sbjct: 75412 CCTCTTCCTTCTCCTCCTCCTCCTTCTCCTTC-TCCTTCTTCCTCTTCTTCTGTTTTTTG 75470 Query: 2157 AG-CAATATCCTTC 2145 AG CA ATC T C Sbjct: 75471 AGACAGGATCTTGC 75484 Score = 291 (43.7 bits), Expect = 0.0061, P = 0.0060 Identities = 113/169 (66%), Positives = 113/169 (66%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCC 2271 CC CT T C TC TC TC TCTTCTTCTTC TCT C TC TC TC TCTT CTCCTC Sbjct: 75244 CCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTCC-TCCTCCTCCTCTTTCTCCTCT 75302 Query: 2270 TCCT-CATCCTCTTCATCTTCCTCATCT--TCCTCCTCTTCCTTCTTTTTCTTG-CTTTT 2215 TCCT C TC TCTTC TCTTC TC TCT TCCTCCTC TCCT CT T CT C TT Sbjct: 75303 TCCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTC 75362 Query: 2214 TTCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTC 2165 TTC C T C CT C T TT T CT C TC CT TCCT T CTC Sbjct: 75363 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TCCTCCTCCTCCTCTTTCTC 75412 Score = 267 (40.1 bits), Expect = 0.075, P = 0.072 Identities = 109/158 (68%), Positives = 109/158 (68%), Strand = Minus / Plus Query: 2328 AACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTC 2269 A CTT TTC TC C TC TC TC TC TC TC TC TC TC T TCTTC TC TC TC Sbjct: 75213 ATCTTTTTCTTCTCCTTC-TCCTCCTCCTCCTCCTCCTCCTCCT--TCTTCTTCTTCTTC 75269 Query: 2268 CTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTT-TT-TTCA 2211 TC TC TCT C TC TCCTC TCTT CTCCTCTTCCTTCTT TTCTT CTT TT TTC Sbjct: 75270 TTCTTCTTCTCC-TCCTCCTCCTCTTTCTCCTCTTCCTTCTTCTTCTT-CTTCTTCTTCT 75327 Query: 2210 GC-CTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTT 2171 C C T C CTCC T T CT C TC CTT T CTT Sbjct: 75328 TCTCCTC-CTCCTCCTCCTCCTCCTCC-TCCTCCTTCTTCTT 75367 Score = 249 (37.4 bits), Expect = 0.49, P = 0.39 Identities = 73/99 (73%), Positives = 73/99 (73%), Strand = Minus / Plus Query: 2308 CTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCT 2249 CTTC TCTTC CTTC CTTC C TC C CCTCCTCCTC TCCTCTTC TCTTCC Sbjct: 75519 CTTCCTCTTCCCCTTCCCCTTCCCCCTCCACTGCCTCCTCCTCCTCCTCTTCCTCTTCCC 75578 Query: 2248 CATCTTCCTCCTCTTC--CTTCTTTTTCTTGCTTTTTTC 2212 C TCTTC TCC CTTC CTTCT TTCTT C TT TC Sbjct: 75579 CTTCTTCTTCCCCTTCTCCTTCTCCTTCTTCCCCTTCTC 75617 >X17199 Chicken mRNA for nucleolin C23 Length = 2576 Plus Strand HSPs: Score = 327 (49.1 bits), Expect = 0.00011, P = 0.00011 Identities = 85/108 (78%), Positives = 85/108 (78%), Strand = Plus / Plus Query: 2216 AAAGC-AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AAAGC AAG AG GAAGA GAGGAAGATGAGGA GATGA GA GA GA GAGGAG Sbjct: 737 AAAGCCAAGGCGGAGTCTGAAGATGAGGAAGATGAGGAGGATGAGGATGAAGATGAGGAG 796 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 GA GAAGATGA GAAGA GAAGATGA GAAGAA TGA GATGA AA Sbjct: 797 GATGAAGATGATGAAGAGGAAGATGAGGAAGAAAGTGAGGATGAAAAA 844 Score = 297 (44.6 bits), Expect = 0.0026, P = 0.0026 Identities = 117/164 (71%), Positives = 117/164 (71%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAA-AAAGGGAGTTGT 2204 AAGG T TTGCT CAT C C AA AAAG CTG TG G A AAAGGG G Sbjct: 365 AAGGCTGTTGCTCCATCCCC--C-AA---AAAGGCTGCTGTCGTAGGCAAAGGG-GCAAA 417 Query: 2205 CAA-GGCTGAAAAAAGCAAGAAAAAGAAG-GAA-GAGGAGGAAGATGAGGAAGATGAAGA 2261 AA GGC AA AA GC A AAAA GAAG GA GAGGAGGAAGATGA GA GATGAAGA Sbjct: 418 AAATGGC--AAGAATGCCA-AAAAGGAAGAGAGCGAGGAGGAAGATGAAGACGATGAAGA 474 Query: 2262 GGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGA 2309 GATGAGGA GA GAGGA GA GAAGA GA GATGA GAAGA GA Sbjct: 475 TGATGAGGAAGATGAGGATGAAGAAGAGGAGTCTGATGAGGAAGAGGA 522 Score = 285 (42.8 bits), Expect = 0.0092, P = 0.0091 Identities = 125/182 (68%), Positives = 125/182 (68%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCC-T-GATGCAGCA---AAAAAGGGA 2199 GAAGG T T GCT C T C AGCTAAA AA GC T G T CA C AAAAAGG Sbjct: 340 GAAGGCTGTGGCTAC-TC-C-AGCTAAA--AAGGCTGTTGCTCCATCCCCCAAAAAGGCT 394 Query: 2200 GTTGTCA-AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAG-ATGAGGAAGATG 2257 G TGTC AGGC AAA GCAA AAA G A GAA A AAG A GAG GA G Sbjct: 395 GCTGTCGTAGGC--AAAGGGGCAAAAAATGGCAAGAATGCCAAAAAGGAAGAGAGCGAGG 452 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 A GA GATGA GA GA GA GA GATGA GAAGATGA GATGAAGAAGA GA TGATG Sbjct: 453 AGGAAGATGAAGACGATGAAGATGATGAGGAAGATGAGGATGAAGAAGAGGAGTCTGATG 512 Query: 2318 ATGAATAAG 2326 A GAA A G Sbjct: 513 AGGAAGAGG 521 Score = 272 (40.8 bits), Expect = 0.036, P = 0.036 Identities = 92/127 (72%), Positives = 92/127 (72%), Strand = Plus / Plus Query: 2200 GTTGTCAAGGCTG-AAAAAA-G-CAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGAT 2256 GT G CAA G G AAAAAA G CAAGAA AA A GA GAG GA GAGGAAGAT Sbjct: 401 GTAGGCAAAGGGGCAAAAAATGGCAAGAATGCCAAAAAGGAAGAGAGCGAGGAGGAAGAT 460 Query: 2257 GAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGAT 2316 GAAGA GATGA GA GA GAGGAAGATGA G GATGAAGA GA GA GATGA GA Sbjct: 461 GAAGACGATGAAGATGATGAGGAAGATGA-G--GATGAAGAAGAGGAGTCTGATGAGGAA 517 Query: 2317 GATGAATAAG 2326 GA GAA AG Sbjct: 518 GAGGAACCAG 527 Score = 270 (40.5 bits), Expect = 0.045, P = 0.044 Identities = 72/93 (77%), Positives = 72/93 (77%), Strand = Plus / Plus Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 AAG A AGG GGA TGA GA GA GAAGA GA GAGGA GAGGA GAAGATGA GA Sbjct: 738 AAGCCA-AGGCGGAGTCTGAAGATGAGGAAGATGAGGAGGATGAGGATGAAGATGAGGAG 796 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 GATGAAGATGA GAAGA GA GATGA GA GAA Sbjct: 797 GATGAAGATGATGAAGAGGAAGATGAGGAAGAA 829 Score = 264 (39.6 bits), Expect = 0.085, P = 0.081 Identities = 96/137 (70%), Positives = 96/137 (70%), Strand = Plus / Plus Query: 2168 CTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAA 2226 CT AG AAAG CT CAGC AAA AG G AG CTGAA A AG AAGA Sbjct: 714 CTCCAGCAAAGGCTACACCAGCTAAAGCCA-AGGCGG--AGTCTGAAGATGAGGAAGATG 770 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 A GA GGA GAGGA GAAGATGAGGA GATGAAGA GATGA GAGGA GA GA GA GAA Sbjct: 771 AGGA-GGATGAGGATGAAGATGAGGAGGATGAAGATGATGAAGAGGAAGATGAGGAAGAA 829 Query: 2287 GAAGATGAAGATGAAGAA 2304 A G TGA GATGAA AA Sbjct: 830 -A-G-TGAGGATGAAAAA 844 Score = 244 (36.6 bits), Expect = 0.70, P = 0.50 Identities = 86/128 (67%), Positives = 86/128 (67%), Strand = Plus / Plus Query: 2203 GTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 G CAAGGC GA G AAGA A GAAG A GAGGAGGA GA GA GAAGATGA GAG Sbjct: 740 GCCAAGGCGGAGTCT-G-AAGATGAGGAAG-ATGAGGAGGATGAGGATGAAGATGAGGAG 796 Query: 2263 GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 GATGA GA GA GA GA GA GA GA GA GAA TGA GA GAA A TG A GAA Sbjct: 797 GATGAAGATGATGAAGAGGAAGATGAGGAAGAAAGTGAGGATGAAAAACCTGTCAAGGAA 856 Query: 2323 TAAGTTGG 2330 A TGG Sbjct: 857 GCACCTGG 864 Score = 240 (36.0 bits), Expect = 1.1, P = 0.66 Identities = 92/138 (66%), Positives = 92/138 (66%), Strand = Plus / Plus Query: 2184 TGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGA 2243 TGCAGC AAAAAG G G CA GCTG A A GC A AAAAG G AG G G Sbjct: 544 TGCAGCCAAAAAGTCCGCAG-CA--GCTGTACCA-GCCA--AAAAGCCTGCAGTTGTGCC 597 Query: 2244 AGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGA 2303 AG AG AAGA GAGGA GAGGAGGAGGA GA GATGAAGA GA GA GA GAAGA Sbjct: 598 AGCAAAGCAAGAATCTGAGGAGGAGGAGGAGGAAGATGATGAAGAGGAGGACGAGGAAGA 657 Query: 2304 AGAAGATGATGATGATGA 2321 GA GA TGA GATGA Sbjct: 658 TGACGAGTCTGAAGATGA 675 Score = 226 (33.9 bits), Expect = 4.7, P = 0.99 Identities = 70/97 (72%), Positives = 70/97 (72%), Strand = Plus / Plus Query: 2206 AAGGCTGAAAAAA-GCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 AAG CTG A GC AG AAA AAG AA GAGGA GA GAGGA GA GA GA GA Sbjct: 581 AAGCCTGCAGTTGTGCCAGCAAAGCAAG-AATCTGAGGAGGAGGAGGAGGAAGATGATGA 639 Query: 2265 TGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAG 2302 GAGGAGGA GAGGAAGATGA GA TGAAGATGA G Sbjct: 640 AGAGGAGGACGAGGAAGATGACGAGTCTGAAGATGAGG 677 Score = 226 (33.9 bits), Expect = 4.7, P = 0.99 Identities = 102/150 (68%), Positives = 102/150 (68%), Strand = Plus / Plus Query: 2155 GCTGCATATCG-AGCTAAAGG---AAAGCCTG--ATGCA-GCAAAAAAGGGAGTTGTCAA 2207 GCTGC T TCG AG AAAGG AAA TG A G A GC AAAAAGG AG C A Sbjct: 392 GCTGC-TGTCGTAGGCAAAGGGGCAAAAAATGGCAAGAATGCCAAAAAGGAAGAGAGCGA 450 Query: 2208 GGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGA 2267 GG GAA A G AAGA A GAAG A GA GAGGAAGATGAGGA GA GAAGAGGA Sbjct: 451 GGAGGAAGAT-G-AAGACGATGAAG-ATGATGAGGAAGATGAGGATGAAGAAGAGGAGTC 507 Query: 2268 GGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAG 2302 GA GAGGA GA GA AG AG TG TGAAG Sbjct: 508 TGATGAGGAAGAGGAACCAGCAG-TGCCTGTGAAG 541 Score = 222 (33.3 bits), Expect = 7.1, P = 1.0 Identities = 94/146 (64%), Positives = 94/146 (64%), Strand = Plus / Plus Query: 2180 CTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGG 2239 CTG CAGC AAAAAG G GT G C G AAA GCAAGAA GA GGA GAGG Sbjct: 567 CTGTACCAGCCAAAAAGCCTGCAGTTGTGCCAGCAAA--GCAAGAATCTGA-GGAGGAGG 623 Query: 2240 AGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATG 2299 AGGA GA GA GA GA GA GAGGA GAGGA GA GA GA TGAAGA GA G ATG Sbjct: 624 AGGAGGAAGATGATGAAGAGGAGGACGAGGAAGATGACGAGTCTGAAGATGAGGCC-ATG 682 Query: 2300 AAGAAGAAGA-TGATGATGATGAATAA 2325 A A A TG T TG TGAA AA Sbjct: 683 GACACAACTCCTGCTCCTG-TGAAGAA 708 Score = 220 (33.0 bits), Expect = 8.8, P = 1.0 Identities = 94/144 (65%), Positives = 94/144 (65%), Strand = Plus / Plus Query: 2178 GCCTGATGCAGCAAAAAAGGGAGTTG-TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAG 2236 G CT T CAGC AAAAAGG GTTG TC A C AAAAAG G G AGG A Sbjct: 349 GGCTACTCCAGCTAAAAAGGCTGTTGCTCCATCCCCCAAAAAGGCTGCTGTCGTAGGCAA 408 Query: 2237 AGGAGGAAGATGAGGAAGATGAA-GAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAA 2295 AGG G AA A GG A A GAA G A AGGA GAG AG AG GA GAAGATGAA Sbjct: 409 AGGGGCAAAAAATGGCA-A-GAATGCCAAAAAGGAAGAG-AGCGAG--GAGGAAGATGAA 463 Query: 2296 GATGAAGAAGAAGATGATGATGATGA 2321 GA GA GAAGA GATGA GA GATGA Sbjct: 464 GACGATGAAGATGATGAGGAAGATGA 489 >M81784 Rattus norvegicus K+ channel mRNA, sequence. Length = 2775 Plus Strand HSPs: Score = 327 (49.1 bits), Expect = 0.00011, P = 0.00011 Identities = 115/165 (69%), Positives = 115/165 (69%), Strand = Plus / Plus Query: 2161 TATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAA- 2217 TAT AG AAG A AAG GA G AG A A GGAG G AGG GAA A Sbjct: 2546 TATGAAGAAGAAGAAGAAGAA-GAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGG 2604 Query: 2218 AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAG 2277 AG A GA AAGA GGA GAGGAGGA GA GAGGA GA GAAGAGGA GAGGAGGAGGAG Sbjct: 2605 AGGAGGAGGAAGA-GGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAG 2663 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GA GA GA GA GA GAAGA GAAGAAGAAGA GA GA A AA AA Sbjct: 2664 GAGGAGGAGGA-GAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAA 2710 Score = 320 (48.0 bits), Expect = 0.00023, P = 0.00023 Identities = 88/115 (76%), Positives = 88/115 (76%), Strand = Plus / Plus Query: 2207 AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATG 2266 AG TGAA AA G AAGAA AAGAAG A GAGGAGGA GA GAGGA GA GA GAGGA G Sbjct: 2544 AGTATGAAGAA-G-AAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAG 2601 Query: 2267 AGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 AGGAGGAGGAGGAAGA GA GA GA GA GA GA GA GA GA GA GA GA GA Sbjct: 2602 AGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGA 2656 Score = 315 (47.3 bits), Expect = 0.00039, P = 0.00039 Identities = 89/116 (76%), Positives = 89/116 (76%), Strand = Plus / Plus Query: 2207 AGGCTGAA-AA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 AG TGAA AA AAG AAGAA AAGAAGGA GAGGAGGA GA GAGGA GA GA GA GA Sbjct: 2544 AGTATGAAGAAGAAG-AAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGA 2602 Query: 2265 TGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GAGGAGGAGGA GA GA GA GA GA GA GA GA GA GAAGA GA GA GA GA Sbjct: 2603 GGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGA 2659 Score = 312 (46.8 bits), Expect = 0.00054, P = 0.00054 Identities = 82/105 (78%), Positives = 82/105 (78%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AG A AG AGGA GAGGAGGAAGA GAGGA GA GAAGAGGA GAGGAGGAGGAGGA G Sbjct: 2578 AGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGG 2637 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GA GAAGA GA GA GA GA GA GA GA GA GA GAA AAG Sbjct: 2638 AGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGA-GAAGAAG 2681 Score = 294 (44.1 bits), Expect = 0.0036, P = 0.0036 Identities = 124/189 (65%), Positives = 124/189 (65%), Strand = Plus / Plus Query: 2124 TTTTATCCT-C-CCT-TTGCTTTGGAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGC 2179 TTTTA CCT C CC TT TTT G A GA G G A A AG AGGA AG Sbjct: 2521 TTTTAGCCTACTCCAATTATTTTAGTATGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGG 2580 Query: 2180 CTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGA 2237 GA G AG A A AGG AG G AGG GAA A AG A GA A GA GGA GA Sbjct: 2581 AGGAGG-AGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGA-GGAGGA 2638 Query: 2238 GGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGA 2297 GGAGGAAGA GAGGA GA GA GAGGA GAGGAGGAG AG AAGA GAAGAAGA GAAGA Sbjct: 2639 GGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAG-AAGAAGAAGAAGAAGAAGA 2697 Query: 2298 TGAAGAAGAAGA 2309 GAA AA AA A Sbjct: 2698 AGAAAAAAAAAA 2709 Score = 288 (43.2 bits), Expect = 0.0068, P = 0.0068 Identities = 84/110 (76%), Positives = 84/110 (76%), Strand = Plus / Plus Query: 2214 AAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGA--AG-AGGATGAGGA 2270 AA AAG AAG A AG AGGA GAGGAGGA GA GAGGAAGA GA AG AGGA GAGGA Sbjct: 2562 AAGAAG-AAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAGGA 2620 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GGAGGAGGA GA GA GA GA GAAGA GA GA GA GA GA GA GA GA Sbjct: 2621 GGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGA 2671 Score = 277 (41.6 bits), Expect = 0.022, P = 0.022 Identities = 77/100 (77%), Positives = 77/100 (77%), Strand = Plus / Plus Query: 2227 AAGAAGGAAGAGGAGGAAGATGA-GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 A GAAG AAGA GA GAAGA GA GGA GA GA GAGGA GAGGAGGAGGAGGAAGA GA Sbjct: 2547 ATGAAG-AAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGA 2605 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GA GAAGA GA GA GA GA GA GA GA GA AAG Sbjct: 2606 GGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAG 2646 >X54504 D. melanogaster mRNA for troponin-T (DNA region with mapped upheld, Length = 1362 Plus Strand HSPs: Score = 324 (48.6 bits), Expect = 0.00011, P = 0.00011 Identities = 80/99 (80%), Positives = 80/99 (80%), Strand = Plus / Plus Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 || ||||||| ||||| || ||||| ||||| ||||| ||||||||||| || || |||| Sbjct: 1095 AGGAGGAAGATGAGGAGGACGAGGAGGATGAGGAGGAGGAGGAGGAGGAAGAGGAGGAAG 1154 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 |||| ||||| || || ||||| || || || ||| ||| Sbjct: 1155 AAGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAAGAAG 1193 Score = 317 (47.6 bits), Expect = 0.00024, P = 0.00024 Identities = 95/130 (73%), Positives = 95/130 (73%), Strand = Plus / Plus Query: 2195 AGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGG 2251 AGG T GTC AGG TGA A AG GA A GA G G GAGGAGGAAGATGAGG Sbjct: 1050 AGGACATCGTCGAGGATGATGAGGAGGTCGAGGAGGAGGTCGTCGAGGAGGAAGATGAGG 1109 Query: 2252 AAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATG 2311 A GA GA GAGGATGAGGAGGAGGAGGA GA GAAGA GA GAAGA GA GAAGA GA G Sbjct: 1110 AGGACGAGGAGGATGAGGAGGAGGAGGAGGAGGAAGAGGAGGAAGAAGAGGAAGAGGAGG 1169 Query: 2312 ATGATGATGA 2321 A GA GA GA Sbjct: 1170 AGGAAGAGGA 1179 Score = 307 (46.1 bits), Expect = 0.00069, P = 0.00069 Identities = 111/160 (69%), Positives = 111/160 (69%), Strand = Plus / Plus Query: 2147 AGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCA 2206 AGGAT TG G A TCGAG AGG G C GA G AG AA A GGAG G C Sbjct: 1062 AGGATGATGAGG-AGGTCGAGGAGGAGGTC-GTC-GAGG-AGGAAGATGAGGAG--GACG 1115 Query: 2207 AGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265 AGG GA A AG A GA A GA GGAAGAGGAGGAAGA GAGGAAGA GA GAGGA Sbjct: 1116 AGGAGGATGAGGAGGAGGAGGAGGA-GGAAGAGGAGGAAGAAGAGGAAGAGGAGGAGGAA 1174 Query: 2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGA 2306 GAGGAGGAGGAGGAAGA GA GAAGA GA GA GA GAA A Sbjct: 1175 GAGGAGGAGGAGGAAGAAGAGGAAGAGGAGGAGGAGGAATA 1215 Score = 283 (42.5 bits), Expect = 0.0090, P = 0.0089 Identities = 79/104 (75%), Positives = 79/104 (75%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AG A AG AGGA GAGGAGGA GA GAGGA GA GAAGAGGA GAGGAGGAGGA GA G Sbjct: 1119 AGGATGAGGAGGAGGAGGAGGAGGAAGAGGAGGAAGAAGAGGAAGAGGAGGAGGAAGAGG 1178 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGA-T-GATGAAT 2323 A GA GA GA GAAGA GAAGA GA GA GA GA T GA AAT Sbjct: 1179 AGGAGGAGGAAGAAGAGGAAGAGGAGGAGGAGGAATAGACCAAT 1222 Score = 282 (42.3 bits), Expect = 0.010, P = 0.0099 Identities = 74/96 (77%), Positives = 74/96 (77%), Strand = Plus / Plus Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 |||| |||| | || ||||||||||| ||||| |||||||| ||||| || || || | Sbjct: 1080 AGGAGGAGGTCGTCGAGGAGGAAGATGAGGAGGACGAGGAGGATGAGGAGGAGGAGGAGG 1139 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 | ||||| || |||||||| || || || || ||| Sbjct: 1140 AGGAAGAGGAGGAAGAAGAGGAAGAGGAGGAGGAAG 1175 Score = 238 (35.7 bits), Expect = 1.1, P = 0.66 Identities = 74/107 (69%), Positives = 74/107 (69%), Strand = Plus / Plus Query: 2220 CAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGA 2279 | || | | |||| | ||||| || | | || || || ||||||||||| ||||| Sbjct: 1060 CGAGGATGATGAGGAGGTCGAGGAGGAGGTCGTCGAGGAGGAAGATGAGGAGGACGAGGA 1119 Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 ||||| || || || || || ||||| || || || || ||| | | Sbjct: 1120 GGATGAGGAGGAGGAGGAGGAGGAAGAGGAGGAAGAAGAGGAAGAGG 1166 Score = 218 (32.7 bits), Expect = 9.2, P = 1.0 Identities = 76/107 (71%), Positives = 76/107 (71%), Strand = Plus / Plus Query: 2172 AGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAA-AGCAAGAAAAA 2228 AGGA AG GATG AG A A GGAG G A AGG GAA AA AG AAGA A Sbjct: 1110 AGGACGAGGAGGATG-AGGAGGAGGAGGAGGAGGAAGAGGAGGAAGAAGAGGAAGAGGAG 1168 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAG 2277 GA GGAAGAGGAGGA GA GA GAAGA GAAGAGGA GAGGAGGA AG Sbjct: 1169 GA-GGAAGAGGAGGAGGAGGAAGAAGAGGAAGAGGAGGAGGAGGAATAG 1216 >M18061 Xenopus laevis vitelloginin gene, complete cds. Length = 5618 Minus Strand HSPs: Score = 328 (49.2 bits), Expect = 0.00011, P = 0.00011 Identities = 292/481 (60%), Positives = 292/481 (60%), Strand = Minus / Plus Query: 2337 GCTAGAACCAAC-TTATTCA-T-CATCATCATCTTCTTCTTCATCTTCATCTTCTTCATC 2281 GC A AA C C TTAT A T C TCATCATCTTCTTC TCATCTTCATC TCTTC TC Sbjct: 3382 GCAACAATCGTCATTATCTAGTTCTTCATCATCTTCTTCATCATCTTCATCCTCTTCTTC 3441 Query: 2280 TTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTT 2221 TC TC TC TC TC TC TC TCATCTTCC CATC TCCTCCTC TCCT CTT T Sbjct: 3442 GTCTTCTTCATCATCTTCATCCTCATCTTCCCCATCATCCTCCTCGTCCT-CTTCATACA 3500 Query: 2220 GCTTTTT-TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAG--GCTTTCCTTTAGCTCG 2164 G TC GA A C T T T CATCAG G TCC TAGC G Sbjct: 3501 GTAAAAGATCTAAAAGGAGAGAGCATAATCCTCAT-CATCAGAGGGAGTCCAGTAGCA-G 3558 Query: 2163 ATATGCAG-CAATATCCTTCCAAAGCAAAGGGAGGATAAAACAGTAGGGAAGAAAAAAAG 2105 TA GCAG CA A C CAAA AAAGG A AT CAG AG AGAAA A G Sbjct: 3559 -TA-GCAGTCAGGAGCAGAACAAAA-AAAGG-A--ATTTG-CAGGAGAATAGAAAGCATG 3611 Query: 2104 ATTAAGGAAAGAAAT-AGAA-CATGGCAGAA-CTTTATGAA-AGAAATCA-AGATTCTAG 2050 AA AA G AAT AG A CA GCAG A C TA A AG A T AG TAG Sbjct: 3612 GCCAA--AAGGGAATGAGTAGCA--GCAGTAGCAGTAGCAGCAGCAGTAGCAGCAG-TAG 3666 Query: 2049 TTATACCAAAA-TATCA-C-GTATCTGTAGATCCAC-AGCAACTCCAGAAATAACTAGAA 1994 T A CA A TA CA C G A C GTAG CA AGCA T AG AA AA TAGA Sbjct: 3667 TAGCAGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGTAGCAG-TG-AGGAA-AA-TAGAC 3722 Query: 1993 CTT-CAATAAATGA-A-CATAAAAATACAAGATCATTATAACAATCTATAACT-CATGAA 1938 C CAA AA GA A CAT A AATA A A CA A CA TCTA A C CAT AA Sbjct: 3723 CCCACAAGAATAGACAGCATGATAATAAACAAGCAAAAATGCAGTCTA-ATCAGCATCAA 3781 Query: 1937 ATGGCATAGT-CTAATATT-TGCAAAGTTATGCCTCATTGAGGTGCAATTATCTACCAGA 1880 G AG C AAT TT TG AAAG A GC CA T AG GCA T A C A CAG Sbjct: 3782 CAGAAGAAGAACAAATTTTCTG-AAAGC-A-GCAGCAGT-AGTAGCAGT-AGC-AGCAGC 3835 Query: 1879 TCCTAACTCTATTAAAACCAGAA 1857 AA T T A AA AGAA Sbjct: 3836 AGTGAAATGTGGAACAAGAAGAA 3858 Score = 324 (48.6 bits), Expect = 0.00017, P = 0.00017 Identities = 236/391 (60%), Positives = 236/391 (60%), Strand = Minus / Plus Query: 2319 ATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTC 2260 ATC TCAT ATCT TTCTTCATC TC TCTTC TCATCTTC TCCTC TC TC TC TC Sbjct: 3388 ATCGTCATTATCTAGTTCTTCATCATCTTCTTCATCATCTTCATCCTCTTCTTCGTCTTC 3447 Query: 2259 TTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTCAGCCTTGACAA 2201 TTCATC TC TCATC TC TC TC CC TC T TC T T T TTCA C A AA Sbjct: 3448 TTCATCATCTTCATCCTCATCTTCC-CCATCATCCTCCTCGTCCTCTTCATACAGTAAAA 3506 Query: 2200 C-TCCCTTTTTTGCT-GCATCAGGCTTTCCTTTAGCTCGA-TAT-GCAGCAATATCCTTC 2145 TC G GCAT A CT C T AG GA T G AGCA TA C TC Sbjct: 3507 GATCTAAAAGGAGAGAGCATAATCCTCATCATCAGAGGGAGTCCAGTAGCAGTAGCAGTC 3566 Query: 2144 CAAAGCAAAGGGAGGATAAAACAGTAGG-GAAGAAAAAAAGATTAAGGAAAGAAATAGAA 2086 AGCA A A A A A A T G G AGAA A AA A A GG A AAA GAA Sbjct: 3567 AGGAGCAGAACAAAAAAAGGA-ATTTGCAGGAGAATAGAA-AGCATGGCCA-AAAGGGAA 3623 Query: 2085 C-A-TGGCAGAACTTTATGAAAGAAATCAAGATTCTAGTTATACCAAAA-TATCACGTAT 2029 A T GCAG A T A G A G A CA A C AGT A CA A TA CA G A Sbjct: 3624 TGAGTAGCAGCAGT--A-GCA-GTAG-CAGCAG-C-AGTAGCAGCAGTAGTAGCA-GCAG 3675 Query: 2028 CTGTAGATCCA-CAGCAACTCCAGAAATAACTAGA-ACTTCAATAAATGAACATAAAAAT 1971 C GTAG CA CAGCA CAG A TA C AG A AATA A CA AA AAT Sbjct: 3676 CAGTAGCAGCAGCAGCAGTAGCAGCAGTAGC-AGTGAGGAAAATAGACCC-CACAAGAAT 3733 Query: 1970 ACA-AG-ATCATTATAA-CAATCTATAACTCA-TGAAATG-GCAT 1931 A A AG AT AT ATAA CAA C A AA CA T AAT GCAT Sbjct: 3734 AGACAGCATGATAATAAACAAGCAAAAATGCAGTCTAATCAGCAT 3778 >X51478 Dictyostelium discoideum Ddp2 plasmid DNA containing gene essential Length = 5852 Plus Strand HSPs: Score = 268 (40.2 bits), Expect = 0.00011, Sum P(2) = 0.00011 Identities = 68/86 (79%), Positives = 68/86 (79%), Strand = Plus / Plus Query: 2251 GAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGAT 2310 ||||||||||| || || || || || || || || ||||||||||||||||| |||||| Sbjct: 4955 GAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAT 5014 Query: 2311 GATGATGATGAATAAGTTGGTTCTAG 2336 || ||||| || ||| ||| | | | Sbjct: 5015 GAAGATGAAGACGAAGATGGGTATTG 5040 Score = 264 (39.6 bits), Expect = 0.00017, Sum P(2) = 0.00017 Identities = 72/93 (77%), Positives = 72/93 (77%), Strand = Plus / Plus Query: 2233 GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGAT 2292 GAAGA GA GA GA GA GAAGATGAAGA GA GA GA GA GA GA GA GA GAAGAT Sbjct: 4955 GAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAT 5014 Query: 2293 GAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GAAGATGAAGA GAAGATG AT TGAAT A Sbjct: 5015 GAAGATGAAGACGAAGATGGGTAT--TGAATTA 5045 Score = 255 (38.3 bits), Expect = 0.00043, Sum P(2) = 0.00043 Identities = 63/78 (80%), Positives = 63/78 (80%), Strand = Plus / Plus Query: 2244 AGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGA 2303 ||| || ||||||||||| || || || || || || || || ||||||||||||||||| Sbjct: 4954 AGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGA 5013 Query: 2304 AGAAGATGATGATGATGA 2321 |||||||| || || || Sbjct: 5014 TGAAGATGAAGACGAAGA 5031 Score = 254 (38.1 bits), Expect = 0.00047, Sum P(2) = 0.00047 Identities = 72/97 (74%), Positives = 72/97 (74%), Strand = Plus / Plus Query: 2232 GGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGA 2291 GGA AG AG A GA GA GAAGATGAAGA GA GA GA GA GA GA GA GA GAAGA Sbjct: 4949 GGACTAGAAG-ATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGA 5007 Query: 2292 TGAAGATGAAGAAGAAGATGATGATGATGAATAAGTT 2328 TGAAGATGAAGA GAAGA GA GATG A T A TT Sbjct: 5008 TGAAGATGAAGATGAAGACGAAGATGGGTATTGAATT 5044 Score = 233 (35.0 bits), Expect = 0.0040, Sum P(2) = 0.0040 Identities = 71/96 (73%), Positives = 71/96 (73%), Strand = Plus / Plus Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AAGA G AAGA GA GA GA GA GAAGATGAAGA GA GA GA GA GA GA GA G Sbjct: 4954 AGAAGATG-AAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAG 5012 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGAT-GA-TGATGAT 2319 A GAAGATGAAGA GAAGA G AT GA T AT AT Sbjct: 5013 ATGAAGATGAAGACGAAGATGGGTATTGAATTATCAT 5049 Score = 201 (30.2 bits), Expect = 0.00011, Sum P(2) = 0.00011 Identities = 255/455 (56%), Positives = 255/455 (56%), Strand = Plus / Plus Query: 1543 AAAAAACCACAGCATCACTA--AGTTAAATTACAAGTCT--GCTGCTCTGTCCAGTAAAT 1598 AAAAA CC CA AT A TA A TTA TT T T G T T T T A TAAAT Sbjct: 2039 AAAAACCCTCATTATAAATATTAATTACTTTGGTTTTTTTTGATTTTTTTTTTAATAAAT 2098 Query: 1599 TAATAAGATTAAGGAA-ATCTA-TAACTCTTATAGTTCAGTAA-ATTGAAATATTAAAT- 1654 T A AA TTA ATCTA T A C T TA TT A AA ATTG A TA TA AT Sbjct: 2099 TTAAAATTTTATTCTCTATCTAATTATACCT-TATTT-ATAAATATTGGA-TAATATATC 2155 Query: 1655 ACTTAATTTTCAGCTTTAGTCATTCTGAAAAGTGTTTATTTCTAGATGTTTCTTAACCTA 1714 A TA TT TCAG TTT G CAT AA T TTAT T TA T TT TTAA T Sbjct: 2156 AAATATTTATCAGTTTTGG-CATGAC-AATTTTAATTATATTTATTTTTTGATTAATTTT 2213 Query: 1715 ATTGCATGTTTATTGACAAATTACCTTTTTTTTTTAAGACCACATTTCCTACT-AAGGAT 1773 TT T TTT TT AAA T CTTTTTTTTTT A TTT T T AA T Sbjct: 2214 TTTTTTTTTTTTTTTTTAAAATTTCTTTTTTTTTTTTTTT-ATTTTTAATTTTTAATTTT 2272 Query: 1774 TAAGGT-CTGACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGTGGCAGTGTC 1832 TA T C ACA T T A T TA T TTT TT ATT AA T T T Sbjct: 2273 TATTTTTCCCACACTTTCATT-T-TATTTTATTTTATTT-ATTGTAAAT-TCATTTTATT 2328 Query: 1833 TACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAAT-AGAG--TTAGGATCTGGTAGAT 1889 TA TTTAAT AAA T T TT T TTTTA T A AG TT A TGG GA Sbjct: 2329 TATT-TTTAATTAAATAGTTTTGGTT-TAATTTTATTCAAAGATTTTAAAAATGGACGA- 2385 Query: 1890 AATTGCACCTCAATGAGGCATAACTTTGCAAATATTAGACTATGCCATTTC-ATGAGTT- 1947 A TT A TC TG GG ATA TTT AA TT TA C TTT A GA TT Sbjct: 2386 ACTT--ATTTCT-TG-GG-ATAGGTTTTTTAAGTTTTTTGTAATACTTTTGGAAGAATTC 2440 Query: 1948 ATAGATTGTTATAATGATCTTGTATTTTTATGT-TCATTTATTGAAGTTCT 1997 A AG TTGT A A AT TGT TTT GT TC TTAT GA TTCT Sbjct: 2441 AAAGGTTGTAAAAGAAATGATGTGCGTTTGAGTGTCGATTAT-GACATTCT 2490 Score = 178 (26.7 bits), Expect = 0.95, Sum P(2) = 0.61 Identities = 42/50 (84%), Positives = 42/50 (84%), Strand = Plus / Plus Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 ||| || ||||||||||||||||| |||||||| ||||| || ||| || Sbjct: 4954 AGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATG 5003 Score = 145 (21.8 bits), Expect = 0.029, Sum P(2) = 0.029 Identities = 111/195 (56%), Positives = 111/195 (56%), Strand = Plus / Plus Query: 1937 TTTCATGAGTTATAGATTGTTATAATGAT-CTTGTATTTTTA--TGTTCATTTATTGAAG 1993 TTT AT A TT TA TT TT T T T CTT T TTTTTA T TT A T TT Sbjct: 1817 TTTAATAAATTCTACTTTTTTTTTTTTTTTCTTTTTTTTTTAAATTTTAAAATTTTTTTT 1876 Query: 1994 TTCTAGTTATTTCTGG-AGTTGCTG-TGGATCTACAGATACGTGATATTTTGGTATAACT 2051 TT TA TTA TCT A TT T AT TA A TA G TATTTT ATA Sbjct: 1877 TTTTA-TTAGATCTCATAATTAAAAATCAATTTAAAATTAAAAGTTATTTTTAAATATGC 1935 Query: 2052 AGAATCTTGATTTCTTTCATAAAGTTCTGCCA--TGTT--CTATTTCTTTCCTTAATCTT 2107 A AA CT A T AT AGTT CCA T TT CTATTTCTTT TT T TT Sbjct: 1936 AAAAACTATAAAAAACTAATGTAGTTTAACCAACTTTTTTCTATTTCTTTTTTTTTTTTT 1995 Query: 2108 TTTTTCTTCCCTACTGT 2124 TTTTT TT TACT T Sbjct: 1996 TTTTTTTTTT-TACTTT 2011 >AL010149 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from contig Length = 6908 Minus Strand HSPs: Score = 291 (43.7 bits), Expect = 0.00012, Sum P(2) = 0.00012 Identities = 439/777 (56%), Positives = 439/777 (56%), Strand = Minus / Plus Query: 2131 GGATAAAACAGTAGGGAAGAAAAAAAGATTAAGGAAAGAAATAGAACATGGCAGAACTT- 2073 G A AAAA A A AA AAAAAAA ATTAAGGAA AAT GA A GG A AA T Sbjct: 5796 GAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAGGAAT--AATGGACAAAGGTATAAATGA 5853 Query: 2072 -TATGAAA-GAAATCAAGATTCTAGTTATACCAAAATATCACGTATCTGTAGATCCACAG 2015 TAT AA GA AT A GATT A ATA AAATA A TA T TA AT A A Sbjct: 5854 GTATACAATGATAT-ATGATTAAATAAATAAATAAATAA-A--TAAATATAAATATATAT 5909 Query: 2014 CAACTCCAGAAATAACTAGAACTTCA-ATAAATGAACATAAAAATACAAGATCATTATAA 1956 A T A A ATA TA A T A AT GA T T C A T AT ATAA Sbjct: 5910 ATA-TATATATATATATATATGTATATATGTGGGAGGTTTTCTTTTCCATTTAAT-ATAA 5967 Query: 1955 CAATCTATAACTCATGAAATGG-CATAGTCTAA-TATTTGCAAAGTTATGCCTCATTGAG 1898 AT TAT T AT A TG CATA C AA TATT A A T AT TC GAG Sbjct: 5968 TTATATATGTGT-ATACATTGTACATATACAAAATATTATTACA-TGATTT-TCC--GAG 6022 Query: 1897 GTGCAATT-AT-CT-ACCAGATCCTAACTCTA-TTAAAA-CCAGAATGTAG-AGACTTTG 1844 T AATT AT CT A CA AT T AC A TTA A CCA AA A A A T Sbjct: 6023 ATATAATTTATACTCAACAAAT--TGACATAAGTTATATTCCATAAANAAATAAAATGAA 6080 Query: 1843 ATTAAAGGGTAGACACTGCCACCTTCTGAATGCAAAAAAGCACTCTACAGGTTTACACTG 1784 A AAA A A A G CA CTT GA T A A A A T TA A GT A A T Sbjct: 6081 AAAAAAAAAAAAAAAAAGGCAACTTG-GA-TATATTATAT-A-TATATATGTA-ATA-TA 6134 Query: 1783 TCAGACCTTAATCCT-TAGTAGGAAATGTGG-TCTTAAAAAAAAAAGGTA-ATTTGTCAA 1727 T A C TTA TC T TA TA GTGG T TT A G TA ATTT TCAA Sbjct: 6135 T-AT-CTTTATTCATATATTATCCTTGGTGGGTATTTATTGGGTT-GTTATATTTTTCAA 6191 Query: 1726 TAAACATGCAATTAGGTTAAGA-AACATCTAGAAATAAACACTTTTCA-GAATG-ACTAA 1670 T A A AA A TTAA A AA AT T GAA T A A TTTCA G T ACT Sbjct: 6192 TTTAAAAAAAAAAAAATTAAAATAATATTTTGAACTTATAAAATTTCAAGTTTCCACTTT 6251 Query: 1669 AGCTGAAAATTAAGTATTTA--ATATTTCAATT-TACTGAACTATAAGAGTTATAGATTT 1613 A T AA ATTAA T TT AT TTT AAT TA T AA A AA A TATA AT T Sbjct: 6252 AA-TAAATATTAAATTGTTCCCATTTTTAAATAATAGTAAAAAAAAAAAAATATATATAT 6310 Query: 1612 CCTTAATCTTATTAATTTACTGGACAGAGCAGCAGACTTGTAATTTAACTTAGTGA-TGC 1554 TA T T ATT AT TA TG A A A A A TT T AT TA T AG A TG Sbjct: 6311 ATATA-TAT-ATTTATGTA-TGTATAATATAT-ACAATTTTCATATATGTGAGAAAATGG 6366 Query: 1553 TGTG-GTTTTTTGAGTATCTAAAGGAAAAGAACATAAATGTTTCAGGATATGACTAAGAA 1495 T G GT TTGA A T A G AAAA AA ATAAA A A A A TAAGAA Sbjct: 6367 TTGGAGTAAATTGAAAAAATGATGAAAAAAAAAATAAAATAAAAAAAAAAAAAATAAGAA 6426 Query: 1494 AAATATAG----CCTATATTACTTTGTCT-AGCCTGTTTT-TGTACTGTATGCCAAGCCA 1441 AAATATA CC A A TAC T T A T TTT T TA T TAT A A Sbjct: 6427 AAATATATTTTACCAAAAATACATAAAATTAAAATAATTTATATA-TATATATATATATA 6485 Query: 1440 TTTGAAAATGCTCATTTTTGACTTGAAGTGACTACCAACAT-TTTCATGA-ACTTCAAGA 1383 T TG A AT CTC T T T A T AA T A TA A AT TTTCAT A ACT A A Sbjct: 6486 TATGTATATACTCGTATATTA--T-AA-T-A-TATTAT-ATATTTCATTACACTGATATA 6538 Query: 1382 TACTGGGGA-ATAACAAAACCAACATAAA 1355 TA TG G A A AA AAAA AA ATAAA Sbjct: 6539 TA-TGTGTACAAAAGAAAAT-AATATAAA 6565 Score = 179 (26.9 bits), Expect = 0.00012, Sum P(2) = 0.00012 Identities = 97/156 (62%), Positives = 97/156 (62%), Strand = Minus / Plus Query: 2324 TATTCATCATCA-TCATCTTCTTCTTCATCTTCATCTTCTTCATCTTC-CTCCTCCTCCT 2267 TATT A ATCA T AT T C TC TCATCTTCATCTTC TCAT TC CT TC T T Sbjct: 5122 TATT-ACGATCAATAATAT-CATCGTCATCTTCATCTTCATCATTATCACTA-TCTTGAT 5178 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTT-TT-TCTTGCTTTTTTCAGC 2209 CAT C T AT TT T ATC T T TTC TTC TT TCTT CTTTTTT A Sbjct: 5179 CATTTCCATGATTTTTTTTATCATGTGTATTTTC-TTCAGCTTGTCTTTCTTTTTTTATG 5237 Query: 2208 CTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTA 2169 TGA T TTTT TG T C TC T CTTTA Sbjct: 5238 AATGAATTATTTTTTTTATGTT-CTTCTTTTGTATCTTTA 5276 >M33025 Rattus norvegicus parathymosin mRNA, 3' end. Length = 378 Plus Strand HSPs: Score = 271 (40.7 bits), Expect = 0.00013, P = 0.00013 Identities = 107/158 (67%), Positives = 107/158 (67%), Strand = Plus / Plus Query: 2163 TCGAGCTAAAGGAAAGCCTGAT-GCA-GCAAAAAAGGGAGTTGTCAAGGCTGAAAA-AAG 2219 T GAG AAGG GCC GA G A G AA AAAG AGT GT AGG GA A AA Sbjct: 7 TGGAGGAGAAGGCTGGCCGGAAAGAACGGAAGAAAGA-AGTAGTGGAGGAGGAGGAGAAT 65 Query: 2220 CAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGA 2279 AG A GA GGA GA GA GAA TG GA GATG AGAGGATGA GA GA AGGA Sbjct: 66 GGAGCTGAGGA-GGAGGAAGAAGAAACTGCTGAGGATGGAGAGGATGATGATGA--AGGA 122 Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 GA GAAGAAGATGA GA GAAGA GA GA GA GATGA G Sbjct: 123 -GACGAAGAAGATGAGGAGGAAGAGGAGGAGGAGGATGAAG 162 Score = 262 (39.3 bits), Expect = 0.00034, P = 0.00034 Identities = 108/160 (67%), Positives = 108/160 (67%), Strand = Plus / Plus Query: 2164 CGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGC-TGAAAAAAGCA 2221 C AG T AGGA AAG CTG GC G AAA AA GGA AAG TG A A G A Sbjct: 2 CAAGGTGGAGGAGAAGGCTG--GCCGGAAAGAACGGAAGAAAGAAGTAGTGGAGGAGG-A 58 Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 GA AA G AG GAGGAGGA GA GA GAA TG GAGGATG GAGGA GA GA G Sbjct: 59 GGAGAATGGAGCT-GAGGAGGAGGAAGAAGAAACTGCTGAGGATGGAGAGGATGATGATG 117 Query: 2282 ATGAAGAAGATGAAGATGA--AG-AAGAAGATGATGATGATGAA 2322 A G AGA GA GAAGATGA AG AAGA GA GA GA GATGAA Sbjct: 118 AAGGAGACGAAGAAGATGAGGAGGAAGAGGAGGAGGAGGATGAA 161 Score = 237 (35.6 bits), Expect = 0.0046, P = 0.0046 Identities = 77/103 (74%), Positives = 77/103 (74%), Strand = Plus / Plus Query: 2226 AAAGAA-GGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATG-AG--GAGGAGGAGGAAG 2281 AAAGAA GGAAGA AG AAG G GGA GA GA GAG ATG AG GAGGAGGAGGAAG Sbjct: 27 AAAGAACGGAAGAA-AG-AAGTAGTGGAGGAGGAGGAGAATGGAGCTGAGGAGGAGGAAG 84 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GAA G TGA GATG AGA GA GATGATGA G GA AAG Sbjct: 85 AAGAAACTGCTGAGGATGGAGAGGATGATGATGAAGGAGACGAAG 129 Score = 207 (31.1 bits), Expect = 2.0, P = 0.87 Identities = 73/104 (70%), Positives = 73/104 (70%), Strand = Plus / Plus Query: 2228 AGAAGGAAGAGGAGGAAGATGA-GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AGAAGG G G GGAA A A GGAAGA AAGA G G GGAGGAGGAGGA ATG A Sbjct: 13 AGAAGGCTG-GCCGGAA-AGAACGGAAGA--AAGAAGTAGTGGAGGAGGAGGAGAATGGA 68 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 G GA GA GA GAAGAAGAA TG TGA GATG A A G TG T Sbjct: 69 GCTGAGGAGGAGGAAGAAGAAACTGCTGAGGATGGAGAGGATGAT 113 >M20616 Rat spleen parathymosin-alpha mRNA, 3' end. Length = 378 Plus Strand HSPs: Score = 271 (40.7 bits), Expect = 0.00013, P = 0.00013 Identities = 107/158 (67%), Positives = 107/158 (67%), Strand = Plus / Plus Query: 2163 TCGAGCTAAAGGAAAGCCTGAT-GCA-GCAAAAAAGGGAGTTGTCAAGGCTGAAAA-AAG 2219 T GAG AAGG GCC GA G A G AA AAAG AGT GT AGG GA A AA Sbjct: 7 TGGAGGAGAAGGCTGGCCGGAAAGAACGGAAGAAAGA-AGTAGTGGAGGAGGAGGAGAAT 65 Query: 2220 CAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGA 2279 AG A GA GGA GA GA GAA TG GA GATG AGAGGATGA GA GA AGGA Sbjct: 66 GGAGCTGAGGA-GGAGGAAGAAGAAACTGCTGAGGATGGAGAGGATGATGATGA--AGGA 122 Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 GA GAAGAAGATGA GA GAAGA GA GA GA GATGA G Sbjct: 123 -GACGAAGAAGATGAGGAGGAAGAGGAGGAGGAGGATGAAG 162 Score = 262 (39.3 bits), Expect = 0.00034, P = 0.00034 Identities = 108/160 (67%), Positives = 108/160 (67%), Strand = Plus / Plus Query: 2164 CGAGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGC-TGAAAAAAGCA 2221 C AG T AGGA AAG CTG GC G AAA AA GGA AAG TG A A G A Sbjct: 2 CAAGGTGGAGGAGAAGGCTG--GCCGGAAAGAACGGAAGAAAGAAGTAGTGGAGGAGG-A 58 Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 GA AA G AG GAGGAGGA GA GA GAA TG GAGGATG GAGGA GA GA G Sbjct: 59 GGAGAATGGAGCT-GAGGAGGAGGAAGAAGAAACTGCTGAGGATGGAGAGGATGATGATG 117 Query: 2282 ATGAAGAAGATGAAGATGA--AG-AAGAAGATGATGATGATGAA 2322 A G AGA GA GAAGATGA AG AAGA GA GA GA GATGAA Sbjct: 118 AAGGAGACGAAGAAGATGAGGAGGAAGAGGAGGAGGAGGATGAA 161 Score = 237 (35.6 bits), Expect = 0.0046, P = 0.0046 Identities = 77/103 (74%), Positives = 77/103 (74%), Strand = Plus / Plus Query: 2226 AAAGAA-GGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATG-AG--GAGGAGGAGGAAG 2281 AAAGAA GGAAGA AG AAG G GGA GA GA GAG ATG AG GAGGAGGAGGAAG Sbjct: 27 AAAGAACGGAAGAA-AG-AAGTAGTGGAGGAGGAGGAGAATGGAGCTGAGGAGGAGGAAG 84 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GAA G TGA GATG AGA GA GATGATGA G GA AAG Sbjct: 85 AAGAAACTGCTGAGGATGGAGAGGATGATGATGAAGGAGACGAAG 129 Score = 207 (31.1 bits), Expect = 2.0, P = 0.87 Identities = 73/104 (70%), Positives = 73/104 (70%), Strand = Plus / Plus Query: 2228 AGAAGGAAGAGGAGGAAGATGA-GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AGAAGG G G GGAA A A GGAAGA AAGA G G GGAGGAGGAGGA ATG A Sbjct: 13 AGAAGGCTG-GCCGGAA-AGAACGGAAGA--AAGAAGTAGTGGAGGAGGAGGAGAATGGA 68 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 G GA GA GA GAAGAAGAA TG TGA GATG A A G TG T Sbjct: 69 GCTGAGGAGGAGGAAGAAGAAACTGCTGAGGATGGAGAGGATGAT 113 >AB006705 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MTH12. Length = 74,877 Plus Strand HSPs: Score = 285 (42.8 bits), Expect = 0.00013, Sum P(2) = 0.00013 Identities = 87/119 (73%), Positives = 87/119 (73%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 AG A AG AGGA GAGGAGGA GA GAGGA GA GA GAGGA GAGGAGGAGGAGGA G Sbjct: 63601 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 63660 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTT-CTA-GCGC 2339 A GA GA GA GA GA GA GA GA GA GA GA GA GAA A GT G T CTA GC C Sbjct: 63661 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAA-AGGTGAGATGCTAAGCTC 63719 Score = 282 (42.3 bits), Expect = 0.00018, Sum P(2) = 0.00018 Identities = 92/131 (70%), Positives = 92/131 (70%), Strand = Plus / Plus Query: 2191 AAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGA 2249 AA AG G GT GT AGG GA A AG A GA A GA GGA GAGGAGGA GA GA Sbjct: 63547 AAGTAGCG-GTGGTGGAGGAGGAGGAGGAGGAGGAGGAGGA-GGAGGAGGAGGAGGAGGA 63604 Query: 2250 GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGA 2309 GGA GA GA GAGGA GAGGAGGAGGAGGA GA GA GA GA GA GA GA GA GA GA Sbjct: 63605 GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA 63664 Query: 2310 TGATGATGATGA 2321 GA GA GA GA Sbjct: 63665 GGAGGAGGAGGA 63676 Score = 278 (41.7 bits), Expect = 0.00027, Sum P(2) = 0.00027 Identities = 102/156 (65%), Positives = 102/156 (65%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGA 2224 A CTA GG CC GA G AGC A G AG GT GG GA A AG A GA Sbjct: 63518 ATCTATGGGCTCACCGGAGGAAGCGGTGGAAGTAGCGGTGGTGGAGGAGGAGGAGGAGGA 63577 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A GA GGA GAGGAGGA GA GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA G Sbjct: 63578 GGAGGA-GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 63636 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 A GA GA GA GA GA GA GA GA GA GA GA GA Sbjct: 63637 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA 63673 Score = 277 (41.6 bits), Expect = 0.00030, Sum P(2) = 0.00030 Identities = 93/133 (69%), Positives = 93/133 (69%), Strand = Plus / Plus Query: 2191 AAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGA--AGGAAGAGGAGGAAGAT 2247 AA AG G GT GT AGG GA A AG A GA A GA AGGA GAGGAGGA GA Sbjct: 63547 AAGTAGCG-GTGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG 63605 Query: 2248 GAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAA 2307 GAGGA GA GA GAGGA GAGGAGGAGGAGGA GA GA GA GA GA GA GA GA GA Sbjct: 63606 GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG 63665 Query: 2308 GATGATGATGATGA 2321 GA GA GA GA GA Sbjct: 63666 GAGGAGGAGGAGGA 63679 Score = 275 (41.3 bits), Expect = 0.00037, Sum P(2) = 0.00037 Identities = 75/100 (75%), Positives = 75/100 (75%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 || | || |||| |||||||| || ||||| || || ||||| |||||||||||||| | Sbjct: 63583 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 63642 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 | || || || || || || || || || || || || || Sbjct: 63643 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA 63682 Score = 275 (41.3 bits), Expect = 0.00037, Sum P(2) = 0.00037 Identities = 75/100 (75%), Positives = 75/100 (75%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 || | || |||| |||||||| || ||||| || || ||||| |||||||||||||| | Sbjct: 63586 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 63645 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 | || || || || || || || || || || || || || Sbjct: 63646 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA 63685 Score = 275 (41.3 bits), Expect = 0.00037, Sum P(2) = 0.00037 Identities = 75/100 (75%), Positives = 75/100 (75%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 || | || |||| |||||||| || ||||| || || ||||| |||||||||||||| | Sbjct: 63589 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 63648 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 | || || || || || || || || || || || || || Sbjct: 63649 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA 63688 Score = 275 (41.3 bits), Expect = 0.00037, Sum P(2) = 0.00037 Identities = 75/100 (75%), Positives = 75/100 (75%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 || | || |||| |||||||| || ||||| || || ||||| |||||||||||||| | Sbjct: 63592 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 63651 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 | || || || || || || || || || || || || || Sbjct: 63652 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA 63691 Score = 275 (41.3 bits), Expect = 0.00037, Sum P(2) = 0.00037 Identities = 75/100 (75%), Positives = 75/100 (75%), Strand = Plus / Plus Query: 2222 AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 || | || |||| |||||||| || ||||| || || ||||| |||||||||||||| | Sbjct: 63595 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG 63654 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 | || || || || || || || || || || || || || Sbjct: 63655 AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA 63694 Score = 249 (37.4 bits), Expect = 0.0050, Sum P(2) = 0.0050 Identities = 119/184 (64%), Positives = 119/184 (64%), Strand = Plus / Plus Query: 2139 GCTTTGGAAGGATAT-TGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAG 2196 GC TGGAAG A TG TG A GAG AGGA AG GA G AG A A Sbjct: 63540 GCGGTGGAAGTAGCGGTGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGG-AGGAGGAGGA 63598 Query: 2197 GGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGA 2255 GGAG G A GG GA A AG A GA A GA GGA GAGGAGGA GA GAGGA GA Sbjct: 63599 GGAGGAGG-A-GGAGGAGGAGGAGGAGGAGGAGGA-GGAGGAGGAGGAGGAGGAGGAGGA 63655 Query: 2256 TGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGA-AGATGATG 2314 GA GAGGA GAGGAGGAGGAGGA GA GA GA GA GA GA GAA A G AGATG T Sbjct: 63656 GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAA-AGGTGAGATGCTA 63714 Query: 2315 ATGAT-GAA 2322 A G T GAA Sbjct: 63715 A-GCTCGAA 63722 Score = 207 (31.1 bits), Expect = 0.00013, Sum P(2) = 0.00013 Identities = 233/403 (57%), Positives = 233/403 (57%), Strand = Plus / Plus Query: 1320 AAAATGTAATCAG-ACTCAGACAAAG-G-CTGTGTACATTT-AT-GT-TGGTTT-TGTTA 1372 A AATG AA CA ACT GA G G CT TG A A TT AT G T GTTT T TT Sbjct: 9419 ATAATGGAAGCATTACTGTGAGTCTGTGACTATGCATAATTGATAGAATAGTTTATTTTC 9478 Query: 1373 TTCCCCAGTATCTTGAAGTTCATGAAAATGTTGGTAGTCACTTCAAGTCAAAAATGAGCA 1432 TT CCC GTA TG TT ATG GTT T TCA T AA T A AT A A Sbjct: 9479 TTTCCC-GTAAGCTGCT-TTGATGCGTC-GTTAATTTTCA-TGAAAATATTACAT-AT-A 9532 Query: 1433 TTTTCAAATGGCTTGGCATACAG--TACAAAAACAGGCTAGACA--AA-GTAATATAGGC 1487 T T C AAT CT GC TA A TA AA A A G TA A A AA GT ATA G Sbjct: 9533 TCTGCCAAT--CTAAGCCTAGAAACTATTAATAAATGATATATAGTAATGTTATAATGTT 9590 Query: 1488 TATATTTTTCTTAGTCATATCCT-GAAACATTTATGTTCTT-TTCCTTTAGATACTCAAA 1545 TA A T T A T T TCC GAAA AT T T TTCT TT T TA T A Sbjct: 9591 TACAAAAATGTAACTTTTTTCCGCGAAAAATATGTATTCTAATTAGAATCTTTAGTATAT 9650 Query: 1546 A--AACCACAGCATCACTAAGTTAAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAATA 1603 AA ACA CATCA TAA TTAAA TA CTGC T T AGTA A TA TA Sbjct: 9651 GGTAAAAACAACATCAATAA-TTAAAATAGCC--CTGCGTATGAATAAAGTATAGTAGTA 9707 Query: 1604 AGATTAAGGAAATCTATAACTCTTATAGTTCAGTAAATTGAAATATTAAATACTTAATTT 1663 AT A AT TATA T T A A TT TAAAT AA A AAATA TA TT Sbjct: 9708 T-ATGGCATACATGTATAGTTTTGAGAATTT--TAAAT--AAGCAAAAAATAGCTAGCTT 9762 Query: 1664 TC-AGCTTTAGTCATTCTGAAAAGTGTTTATTTCTAGA-TGTTTCTTAACCTAATTGCAT 1721 A CTT AGT TTCT AAAA TTT T TC A TGTTTCTTAA TAA T AT Sbjct: 9763 AAGAACTTAAGTGTTTCTTAAAAAAATTT-TGTCGGCAATGTTTCTTAATATAACTAAAT 9821 >M60664 Rat prothymosin-alpha mRNA, 5' end. Length = 446 Plus Strand HSPs: Score = 269 (40.4 bits), Expect = 0.00014, P = 0.00014 Identities = 75/100 (75%), Positives = 75/100 (75%), Strand = Plus / Plus Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGA 2282 GA AA GA GG AGA GA GAAGA GA GAAG TG GAGGA AGGAGGAGGAG AAGA Sbjct: 333 GACAATGA-GGTAGATGAAGAAGAGGAAGAAGGTGGGGAGGAAAAGGAGGAGGAGAAAGA 391 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 G GA G TGA GA GAAGA G AGATGA GATGA GAA Sbjct: 392 AGGTGATGGTGAGGAAGAAGATGGAGATGAAGATGAGGAA 431 Score = 236 (35.4 bits), Expect = 0.16, P = 0.14 Identities = 100/145 (68%), Positives = 100/145 (68%), Strand = Plus / Plus Query: 2167 GCTAAAGGAAA-GC-CTGA-TGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAA 2222 GC AA GG AA GC C A TG AG AAAA GGGAG G AGGCTGA AA AG A Sbjct: 288 GCCAATGGGAACGCTCAAAATG-AGGAAAATGGGGAGCAGG--AGGCTGACAATGAGGTA 344 Query: 2223 GAAAAAGAAG-G-AAGA-GGAGGA-AG-ATGAGGAAGATGAAGAGGATGAGGAGGAGGAG 2277 GA AAGAAG G AAGA GG GG AG A AGGA GA GA A GA G GA G GAG Sbjct: 345 GATGAAGAAGAGGAAGAAGGTGGGGAGGAAAAGGAGGAGGAGAAAGAAGGTGATGGTGAG 404 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAG 2305 GAAGA GA G AGATGAAGATGA GAAG Sbjct: 405 GAAGAAGATGGAGATGAAGATGAGGAAG 432 >U82710 Sorex araneus locus 2 microsatellite sequence. Length = 144 Plus Strand HSPs: Score = 279 (41.9 bits), Expect = 0.00015, P = 0.00015 Identities = 85/117 (72%), Positives = 85/117 (72%), Strand = Plus / Plus Query: 2213 AAAAAAGCAAGAA-AAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAG 2271 AAA AA AAGAA AAAGAAGG GAGGAGGA GA GAGGA GA GA GAGGA GAGGAG Sbjct: 8 AAACAAAAAAGAAGAAAGAAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG 67 Query: 2272 GAGGAGGAAGATGAAGAAG-ATGAAGATGAAGAAGAAGATGATG-ATGATGAATAAG 2326 AG AGGAA A GAAGA A GA GA GA AAG AG ATG A GAT AA AAG Sbjct: 68 CAGAAGGAATAAGAAGAGTCAGGAGGAGGAGAAAGGAGGGAATGGAGGATAAAGAAG 124 >Z28201;Y13137 S.cerevisiae chromosome XI reading frame ORF YKL202w Length = 2556 Minus Strand HSPs: Score = 324 (48.6 bits), Expect = 0.00015, P = 0.00015 Identities = 152/232 (65%), Positives = 152/232 (65%), Strand = Minus / Plus Query: 2341 CTGCGCTAGAACCAACTTATTCATCATCATCATCTTC-TTCTTCATCTTCATCTTCTTCA 2283 CT C CT CC CTT TTC T TC TC TCTTC TTCTT TCTTC TCTTCTTC Sbjct: 817 CTCCTCTTCCTCCTGCTTCTTCTTT-TCTTCTTCTTCCTTCTTTTTCTTC-TCTTCTTCT 874 Query: 2282 TCTTCCTCCTCCTCCTCATCCTCTTCAT-CTTCCTCATCTTCCTCCTCTTCCTTCTTTTT 2224 TC T CT T CT CTC TCCTCTTC T CTT TC T TTC TC TCTTCCTTCTT TT Sbjct: 875 TCCTTCTTTTTCTTCTCTTCCTCTTCCTTCTTTTTCTT-TTCTTCTTCTTCCTTCTTCTT 933 Query: 2223 CTTGCTTTTTTCAGCCTTGA-CAACT-C-CCTTTTT-TGCTGCATCAGGCTT-TCCTTTA 2169 CTT T TTC CCTT C CT C CCT TT T CT C TC CTT TCC T Sbjct: 934 CTTTTCCTCTTCTTCCTTCTTCTTCTTCTCCTCTTCCTCCTTCTTCTT-CTTCTCCCTCC 992 Query: 2168 GCTCGATATGCAGCAA-TATCCTTCCA-AAGCAAAGGGAG-G-ATAAAACAGTAGGG 2116 GCT T T C CAA TA C T CA AAGCA AG G ATA AA A TAGGG Sbjct: 993 GCTTTCTTT-CTTCAAGTAACTTGGCATAAGCATAGTCCTCGTATACAATAATAGGG 1048 Score = 311 (46.7 bits), Expect = 0.00059, P = 0.00059 Identities = 117/160 (73%), Positives = 117/160 (73%), Strand = Minus / Plus Query: 2329 CAACTT-ATTCATCATCATCATCTTCTTCTTCAT-CTTCATCTTCTTCATCTTCCTCCTC 2272 CA CTT ATTC TC T AT TCTTC TCTTCAT CTTCATCTT TTC CTTC TCCT Sbjct: 726 CATCTTCATTCTTCTT-ATTTTCTTCATCTTCATTCTTCATCTT-TTCTCCTTCTTCCTG 783 Query: 2271 CTCCTCATCCTCTTCATCTTCCT-CATCTTC--CTCCTCTTCCTTCTTTTTCTTGCTTTT 2215 CT CT T CTCTTC TCTTCCT C TCTT CTCCTCTTCCT CT TTCTT CTTTT Sbjct: 784 CTTCTTCTTCTCTTCTTCTTCCTTCTTCTTTTTCTCCTCTTCCTCCTGCTTCTT-CTTTT 842 Query: 2214 -TTCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTT 2170 TTC C TT C CT T TT T CT C TC CTT C TTT Sbjct: 843 CTTCTTC-TTC-CTTCTTTTTCTTCT-CTTCTTCTTCCTT-CTTTT 884 Score = 307 (46.1 bits), Expect = 0.00090, P = 0.00090 Identities = 117/166 (70%), Positives = 117/166 (70%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTC-TTCTTCATCTTCATCTTCTTCATCTTCCTCCTC 2272 CC CTT TTC TC TC TC TCTTC TTCTTC T TTC TC TCTTC TC T CT CT Sbjct: 780 CCTGCTTCTTCTTC-TCTTCTTCTTCCTTCTTCTTTTTC-TCCTCTTCCTCCTGCTTCTT 837 Query: 2271 CTCCTCATCCTCTTCAT-CTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT- 2214 CT TC TC TCTTC T CTT TC TCT C TC TCTTCCTTCTTTTTCTT CT TT Sbjct: 838 CTTTTCTTCTTCTTCCTTCTTTTTCTTCT-CTTCTTCTTCCTTCTTTTTCTT-CTCTTCC 895 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTC 2165 TC CCTT C T C TTT TT CT C TC CTT T CTTT CTC Sbjct: 896 TCTTCCTT--CTTTTTCTTTTCTT-CTTCTTCCTTCTTCTTCTTTTCCTC 942 Score = 297 (44.6 bits), Expect = 0.0026, P = 0.0026 Identities = 117/159 (73%), Positives = 117/159 (73%), Strand = Minus / Plus Query: 2325 TTATTCATCATCAT-CATCTTCTT--CTTCATCTTCATCTTCTTCATCTTC-CTCCTCCT 2270 TT TTCATC TCAT C TCTT TT CTTCATCTTCAT T CTTCATCTT CTCCT CT Sbjct: 721 TTCTTCATCTTCATTCTTCTTATTTTCTTCATCTTCAT-T-CTTCATCTTTTCTCCTTCT 778 Query: 2269 -CCT-CATCCTCTTCATCTTCCTCATC-TTCCTCCTCTTC-CTTCTTTTTCTTGCTTTTT 2214 CCT C TC TCTTC TCTTC TC TC TTC TC T TTC C TCTT TC TGCTT TT Sbjct: 779 TCCTGCTTCTTCTTC-TCTTCTTCTTCCTTCTTCTTTTTCTCCTCTTCCTCCTGCTTCTT 837 Query: 2213 TCAGCCTTGACAACTCCCTT-TTTTGCTGCATCAGGCT-TTCCTT 2171 CTT C CT CCTT TTTT CT C TC T TTCCTT Sbjct: 838 CTTTTCTT--CTTCTTCCTTCTTTTTCTTC-TCTTCTTCTTCCTT 879 Score = 285 (42.8 bits), Expect = 0.0092, P = 0.0091 Identities = 111/157 (70%), Positives = 111/157 (70%), Strand = Minus / Plus Query: 2326 CTTATT-CATCATCATCATCTTCTTCTTCAT-CTTCATCTTCTTCATCTTCCTCCTCCTC 2269 CTT T C TC TC T TCTTC TCTTCAT CTTC T TT TTC TCTTCCT CT CT Sbjct: 636 CTTCCTGCTTCTTCTTT-TCTTCATCTTCATTCTTCTTGTTTTTC-TCTTCCTGCTTCTT 693 Query: 2268 CTCATCCTCTTCATC-TTCCTCATCTTCCTCCTCTTCCTTCTTT-TTCTTGCTTTTTTCA 2211 T TCCTCTTC TC TTC TC TCTT TC TC TC TTC TT TTCTT TTT TTCA Sbjct: 694 TTTTTCCTCTTCTTCGTTCTTCTTCTTT-TCTTCATC-TTCATTCTTCTTATTTTCTTCA 751 Query: 2210 GCCTTGACAACTCC-CTTTTTTGCTGCATCAGGCTT-TCCTT 2171 C TT A TC CTTTT T CT C TC GCTT T CTT Sbjct: 752 TC-TTCATTCTTCATCTTTTCTCCTTCTTCCTGCTTCTTCTT 792 Score = 284 (42.6 bits), Expect = 0.010, P = 0.010 Identities = 114/162 (70%), Positives = 114/162 (70%), Strand = Minus / Plus Query: 2326 CTTATTCATCAT-CATCATCTTCTTCTTCATCTTCAT-CTTCTTCATCTTCCTCCTCCTC 2269 C T TTC TC T C TC TCTT TTCTTCATCTTCAT CTTCTT AT TTC TC TC TC Sbjct: 699 CCTCTTCTTCGTTCTTCTTCTT-TTCTTCATCTTCATTCTTCTT-ATTTTCTTCATCTTC 756 Query: 2268 CT-CATCCTCTTCATCTTCCTCATCTTCCTCCT-CTTC-CTTCTTTTTCTTGCTT-TTTT 2213 T C TC TCTT TCT C TC TC T CT CT CTTC CTTCTT TTC T CTT TTTT Sbjct: 757 ATTCTTCATCTTT-TCTCCTTCTTCCTGCTTCTTCTTCTCTTCTTCTTCCTTCTTCTTTT 815 Query: 2212 CAGCCT-TGACAACTCCCT-TT-TTTGCTGCATCAGGCTTTCCTTT 2170 CCT T C CT C T TT TTT CT C TC CTT C TTT Sbjct: 816 TCTCCTCTTCCTCCTGCTTCTTCTTTTCTTCTTCTTCCTT-CTTTT 860 Score = 276 (41.4 bits), Expect = 0.024, P = 0.023 Identities = 112/155 (72%), Positives = 112/155 (72%), Strand = Minus / Plus Query: 2325 TTATTCATCATCATCATCTTCTTC-TTCATCTTCATCTTCTTCATCTTCCTCCTCC-TCC 2268 TT TTC TC T TC TC TCTTC TTC TCTT AT TTCTTCATCTTC T CT C TC Sbjct: 710 TTCTTCTTCTTT-TCTTCATCTTCATTCTTCTT-ATTTTCTTCATCTTCATTCTTCATCT 767 Query: 2267 TCA-TCCT-CTTCAT-CTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT-TTC 2212 T TCCT CTTC T CTTC TC TCT C TC TCTTCCTTCTT TT TT CT T TTC Sbjct: 768 TTTCTCCTTCTTCCTGCTTCTTCTTCT-CTTCTTCTTCCTTCTTCTTTTT-CTCCTCTTC 825 Query: 2211 AGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTC-CTT 2171 CCT G C CT C TTT TT CT C TC CTTT CTT Sbjct: 826 CTCCT-G-CTTCTTCTTTTCTT-CTTCTTCCTTCTTTTTCTT 864 Score = 273 (41.0 bits), Expect = 0.033, P = 0.032 Identities = 111/160 (69%), Positives = 111/160 (69%), Strand = Minus / Plus Query: 2325 TTATTCATCATCATCATCTTCTTCTT-CATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 TT TTC TC T TC TC TCTTC T C TCTTC T TTCTTCATCTTC T CT CT T Sbjct: 617 TTCTTCTTCTTT-TCTTCCTCTTCCTGCTTCTTCTT-TTCTTCATCTTCATTCTTCTTGT 674 Query: 2266 CATCCTCTTCAT-CTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCC 2208 T CTCTTC T CTTC T T TTCCTC TCTTC TTCTT TTCTT TT TT CA C Sbjct: 675 TTTTCTCTTCCTGCTTCTTTTT-TTCCTCTTCTTCGTTCTTCTTCTT--TTCTT-CATC- 729 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCT 2166 TT A CT C T TTTT CT CATC C TTC TT A CT Sbjct: 730 TTCATT-CTTCTTATTTT-CTTCATCTT-CATTC-TTCATCT 767 Score = 261 (39.2 bits), Expect = 0.12, P = 0.11 Identities = 123/187 (65%), Positives = 123/187 (65%), Strand = Minus / Plus Query: 2330 CCAACTTATTCATCATCATCATCTTCTTC-TTCATCTTCATCTTCTTCATCTTCCTCCTC 2272 CC CT TTC T T TC TCTTCTTC TTC TCTTC T TTCTTC TCTTCCT CT Sbjct: 588 CCTCCTGCTTCTTTTTT-TCCTCTTCTTCGTTCTTCTTCTT-TTCTTCCTCTTCCTGCTT 645 Query: 2271 CTCCTCATCCTCTTCATC-TTCCTCATCTTCCTCCTCTTCCTTCTT-TTTCTTGCTTTTT 2214 CT CT TC TC TC TC TTC TC T TT TC TCTTCCT CTT TTT TT C T TT Sbjct: 646 CTTCTTTTCTTCATCTTCATTCTTCTTGTTTTTC-TCTTCCTGCTTCTTTTTTTCCTCTT 704 Query: 2213 TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCT-TTAGCTCGATATGCAGC 2155 C C TT C CT C TTT TT T C TCA CTT C T TT CT AT T CA Sbjct: 705 -CTTCGTT--CTTCTTCTTTTCTTCAT-CTTCATTCTT-CTTATTTTCTTCATCTTCATT 759 Query: 2154 AAT-ATCCTTCC 2144 T ATC TT C Sbjct: 760 CTTCATCTTTTC 771 Score = 257 (38.6 bits), Expect = 0.18, P = 0.16 Identities = 115/168 (68%), Positives = 115/168 (68%), Strand = Minus / Plus Query: 2325 TTATTCATCATCAT-CATCTTCTTCTTCATCTTCAT-CTTCTTCATCTTCCTCCTCCTCC 2268 TT TTCATC TCAT C TCTT TT TTC TCTTC T CTTCTT T TTCCTC TC TC Sbjct: 652 TTCTTCATCTTCATTCTTCTTGTTTTTC-TCTTCCTGCTTCTTTTT-TTCCTCTTCTTCG 709 Query: 2267 T-CATCCTCTTCATCTTCCTCATC-TTCCTCCTCTTC-CTTC-T-TT--TTCTTGCTTTT 2215 T C TC TCTT TCTTC TC TC TTC TC T TT CTTC T TT TTCTT T TT Sbjct: 710 TTCTTCTTCTTT-TCTTCATCTTCATTCTTCTTATTTTCTTCATCTTCATTCTTCATCTT 768 Query: 2214 TTCAGCCT-TGACAACTCCCTTTTTTGCTGCATCAGGCTT-TCCTTTAGCTC 2165 TTC C T T C CT C T TT T CT C TC CTT T CTTT CTC Sbjct: 769 TTCTCCTTCTTCCTGCTTCTTCTTCT-CTTCTTCTTCCTTCTTCTTTTTCTC 819 >X56824 M.musculus gene for haem oxygenase (exon 1) Length = 1450 Minus Strand HSPs: Score = 321 (48.2 bits), Expect = 0.00016, P = 0.00016 Identities = 137/189 (72%), Positives = 137/189 (72%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCT-TCCTCCTC-CTC 2269 CTT T C TC TC TC TCTTCT CTTC TCTTC TCTTCT C TCT T CTC TC CT Sbjct: 999 CTTCT-CTTC-TCTTC-TCTTCT-CTTC-TCTTC-TCTTCT-CTTCTCTTCTCTTCTCTT 1051 Query: 2268 CTCATCCTCTTCATCTTC-CTCATCTTC-CTCCTCTTC-CTTCTTTT-TCTTGCTTTTTT 2213 CTC TC TCTTC TCTTC CT TCTTC CT CTCTTC CTTCT TT TCTT CT TTTT Sbjct: 1052 CTCTTC-TCTTC-TCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT-CTCTTTT 1108 Query: 2212 CAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAA 2153 C T C CTCCCTTTTTT TG A CAG CTT CC AG TC ATATG A A Sbjct: 1109 TTTCTCTCTCT-CTCCCTTTTTTTTTGTAACAGACTTGCCAG-AG-TC-ATATG-ATTTA 1163 Query: 2152 TATCCTTCCAAAGCA 2138 T CCTT CA GCA Sbjct: 1164 TCCCCTTACAG-GCA 1177 >Z73910 Caenorhabditis elegans cosmid M117 Length = 28,014 Plus Strand HSPs: Score = 325 (48.8 bits), Expect = 0.00017, P = 0.00017 Identities = 317/530 (59%), Positives = 317/530 (59%), Strand = Plus / Plus Query: 1832 CTACCC-T-TTAATCAAAGTCTCTACATTCTGGTTTTAATAGAGTTAGGATCTGGTAGA- 1888 CTACC T TTAA C A T TC TTC T AA A A TTA ATC G A A Sbjct: 1619 CTACCTGTCTTAACCTACTTTTCATTTTTCATCCCTGAAAA-ATTTAA-ATCAGCAAAAA 1676 Query: 1889 -TAATTGCACCTCAATGAGGCATAACTTTGC-AAA-TATTAG-ACTATGCCATTTCATGA 1944 TAATT ACC CAAT TAACTTT AAA TAT A A T T C ATTT AT Sbjct: 1677 TTAATTT-ACCCCAATTCTTT-TAACTTTATGAAACTATAATTAGTTTTCAATTTAATTT 1734 Query: 1945 GTTATAGATTGTTATAATGATCTTGTATTTTTATGTTCATTTATTGAAGTTCTAGTTATT 2004 T AT A T TTAT T T TTG A T T T CATTT T AA TT T GT A Sbjct: 1735 CTGATGCACTTTTATT-TCCTGTTGAAAGTCT---TCCATTT-TCCAAATT-T-GTCAAA 1787 Query: 2005 TCTGGAGTTGCTGTGGATCTACAGATACGTGATATTTTGGTATAACT-AGAATCTTGATT 2063 C T G AT TA A AT CG G T T T G AT A AA TT ATT Sbjct: 1788 ACCATCCATCAAGCACAT-TAGAAATCCGAG-T-TCTGAGCATTGTGCATAAAATTCATT 1844 Query: 2064 TCTTTCATAAAGTTCTGCCATGTTC-TATTT--CTTTCCTTAAT-CTTTTTTTCT-TCCC 2118 TCTTTCA A TT T CC T TTC T T C T CT AAT C TT T T T C Sbjct: 1845 TCTTTCACCGACTTTTTCC-TCTTCATGCTCAACCGTTCTCAATACCTTCACTGTCTGCG 1903 Query: 2119 TA-CTGTTTTATC-CTCCCTTTGCTTTGGAAGGATAT-TGCTGCATATCGAGCTAAAG-G 2174 TA C T TC C C CT GC T G GA T TGCTG T TCGAG AAAG G Sbjct: 1904 TATCCATCACGTCGCGCACTC-GCCATAGTCCGAAGTCTGCTG--TGTCGAGA-AAAGAG 1959 Query: 2175 AAAGCCTGATGCAGCAAAAAAGGGAGT--TGTCAA-GGCTGAAAAAAGCAAGAAAAAGAA 2231 AAA CC GA A AA A G AG TG AA GG TG A A A AAGA A AGA Sbjct: 1960 AAAACC-GAAAAAAAAACAGCAGCAGCAATGGGAATGGTTGTAGAGA--AAGAGAGAGA- 2015 Query: 2232 GGAAGAGGAGGAAG-ATGAGGAA-GATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 GGAAGAG AG A G ATGA AA GA GAA AG A GGAG AG AG A GA GA GAA Sbjct: 2016 GGAAGAG-AG-ATGCATGAAAAAAGAAGAAAAGAAAT-GGAGTAGAAG-AGGAGGACGAA 2071 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATA-AGTTGGTTCTAGCGCAGTTTTTTT 2348 GA GAAGATGAAGAAGAA A A GA GA GAA A A TG TT TAGC AGT Sbjct: 2072 GAAGAAGATGAAGAAGAAAAATAAGAAGAAGAAAATACATG-TTATAGCTGAGTCGAGCC 2130 Query: 2349 T-TTCTTGTCTATA 2361 T TTC T TCTATA Sbjct: 2131 TCTTCGTCTCTATA 2144 >L15351 Mesocricetus auratus alpha-cardiac myosin heavy chain gene exons Length = 32,415 Minus Strand HSPs: Score = 325 (48.8 bits), Expect = 0.00017, P = 0.00017 Identities = 81/101 (80%), Positives = 81/101 (80%), Strand = Minus / Plus Query: 2322 TTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATC 2263 ||| || || || ||||||||||| ||||| |||||||| ||||| || || || || || Sbjct: 27205 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 27264 Query: 2262 CTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCT 2222 ||||| ||||||| || |||||||| |||| |||||| | Sbjct: 27265 TTCTTCCGCTTCCTCCTCCTCCTCCTCCTCCTCCTTTTTTT 27305 Score = 316 (47.4 bits), Expect = 0.00043, P = 0.00043 Identities = 82/104 (78%), Positives = 82/104 (78%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 27204 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 27263 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTC 2223 C TC TC C TC TCCTC TC TCCTCCTC TCCTT TTTTTC Sbjct: 27264 CTTCTTCCGCTTCCTCCTCCTCCTCCTCCTCCTCCTT-TTTTTC 27306 Score = 314 (47.1 bits), Expect = 0.00053, P = 0.00053 Identities = 102/144 (70%), Positives = 102/144 (70%), Strand = Minus / Plus Query: 2314 CATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCAT 2255 C TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC TC TC TCTTC T Sbjct: 27204 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 27263 Query: 2254 CTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCTTGACAACTCCCT 2195 CTTC TC CTTCCTCCTC TCCT CT T CT TTTTTTCA T GAC CT C Sbjct: 27264 CTTCTTCCGCTTCCTCCTCCTCCTCCTCCTCCTCCTTTTTTTCAA--T-GACCCCTTCTA 27320 Query: 2194 TTTTTG-CTGCATCAGGCTTTCCTT 2171 TTTT CTG A A CT T TT Sbjct: 27321 ATTTTCTCTGAACAAAACTATGGTT 27345 Score = 303 (45.5 bits), Expect = 0.0017, P = 0.0017 Identities = 79/102 (77%), Positives = 79/102 (77%), Strand = Minus / Plus Query: 2317 CATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTT 2258 | || || ||||||||||| ||||| |||||||| ||||| || || || || || |||| Sbjct: 27204 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 27263 Query: 2257 CATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTT 2216 | |||||| | || |||||||| |||| || | ||| ||| Sbjct: 27264 CTTCTTCCGCTTCCTCCTCCTCCTCCTCCTCCTCCTTTTTTT 27305 Score = 281 (42.2 bits), Expect = 0.017, P = 0.017 Identities = 83/108 (76%), Positives = 83/108 (76%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTCC C TCCTCCT Sbjct: 27222 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGCTTCCTCCT 27281 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCC-T--CCTCTTCCTTCTTTT-TCT 2222 C TCCTC TC TC TCCT T TTC T CC CTTC T TTTT TCT Sbjct: 27282 CCTCCTCCTCCTCCTCCTTTTTTTCAATGACCCCTTC-TAATTTTCTCT 27329 >U82671 Homo sapiens cosmids Qc14E2, Qc12H12, Qc11F9, Qc10G9, LA1733 and Length = 132,563 Minus Strand HSPs: Score = 325 (48.8 bits), Expect = 0.00017, P = 0.00017 Identities = 163/249 (65%), Positives = 163/249 (65%), Strand = Minus / Plus Query: 2404 TTCTTTAAAAGGAGTGAGTTGTGTACAGGGGGGTTAAATGCTTTAT-AGACAAGAAAAAA 2346 TTCTT A A GGA AG GTG CAG G TG T AT A CAA AAAA Sbjct: 125374 TTCTTGACACGGAAC-AGCAGTGAGCAGAGCCCGGGCCTGATG-ATGACGCAAACCAAAA 125431 Query: 2345 AAAACTGCGCTAGAACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTC- 2287 A AACT C C A CCAAC AT C TC TC TC TCTTCTT C TCTTC TC TC Sbjct: 125432 ACAACTACCC-ACCCCCAACACATCC-TC-TCTTC-TCTTCTTACACTTCTTCCTCCTCC 125487 Query: 2286 TTCA--TCTTCCTCCTCCTCCTCATCCTC-TTCATCTTCCTCATCTTCCTCCTCTTCCTT 2230 TTC TCTTCCTCCTCC CCTC TCCTC TTC TC TCC C TCTTCCTCCT TCCT Sbjct: 125488 TTCCCCTCTTCCTCCTCCCCCTCTTCCTCCTTC-TCCTCCCCCTCTTCCTCCTGCTCCTC 125546 Query: 2229 CTTTTTCTTGCTTTTT-TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCT-TTCCT 2172 CTT TTCT CT TT TC CC GA A TCC TT TT T C TC CT TT CT Sbjct: 125547 CTTATTCTC-CTCTTCCTCCTCCC-GATCA-TCCTCTTCTTAATTC-TCCTCCTCTTTCT 125602 Query: 2171 TTAGCTCGATA-TGCAG 2156 T CTC T TGCAG Sbjct: 125603 CTTCCTCACTGGTGCAG 125619 >L27124 Rattus sp. NRD convertase (NRDC) mRNA, complete cds. Length = 3581 Plus Strand HSPs: Score = 323 (48.5 bits), Expect = 0.00018, P = 0.00018 Identities = 85/109 (77%), Positives = 85/109 (77%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAGAAG-GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AAA CA GAAA AA GA GA GAGGAAGA GA GAAGA GAAGAGGA GAGG GGA Sbjct: 461 AAAACAGGAAATGCAACAGATGAAGAGGAAGAGGAAGAAGAGGAAGAGGAGGAGGGGGAA 520 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 GAGGAAGA GAAGA GA GAAGA GA GA GA GATGATGATGA GA T Sbjct: 521 GAGGAAGAGGAAGAGGAAGAAGACGATGACGATGATGATGATGAAGACT 569 Score = 315 (47.3 bits), Expect = 0.00042, P = 0.00041 Identities = 91/119 (76%), Positives = 91/119 (76%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAGAAG-GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AAA CA GAAA AA GA GA GAGGAAGA GA GAAGA GAAGAGGA GAGG GGA Sbjct: 461 AAAACAGGAAATGCAACAGATGAAGAGGAAGAGGAAGAAGAGGAAGAGGAGGAGGGGGAA 520 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCT 2334 GAGGAAGA GAAGA G GAAGA GA GA GA GATGATGATGATGAA A TGG CT Sbjct: 521 GAGGAAGAGGAAGA-G--GAAGAAGACGATGACGATGATGATGATGAAGACTCTGGAGCT 577 Score = 297 (44.6 bits), Expect = 0.0028, P = 0.0028 Identities = 121/187 (64%), Positives = 121/187 (64%), Strand = Plus / Plus Query: 2138 TGCTTTGGAAGGA-TATTGCTG-CATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAA 2195 TG TTG A G T TTG T CA ATC A TAA G AG T A CAG AAA Sbjct: 415 TGGCTTGCAGGCTCTTTTGATTTCAGATCTAAGTAATGTGGAGGGTAAAACAGGAAATGC 474 Query: 2196 GGGAGTTGTCAAGGCTGAAAAAAGCA-AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAG 2254 AG TG AGG GA AA G A AG AA AG AGGA G GGA GA GA GAGGAAG Sbjct: 475 AACAGATGAAGAGGAAGAGGAA-GAAGAGGAAGAGGAGGAGGGGGAAGAGGAAGAGGAAG 533 Query: 2255 ATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGA-AGAAGATGAT 2313 A GAAGA GA GA GA GA GA GA GATGAAGA TG AG TGA GA A A GATGAT Sbjct: 534 AGGAAGAAGACGATGACGATGATGATGATGAAGACTCTGGAGCTGA-GATACAGGATGAT 592 Query: 2314 GATGATGAA 2322 GATGA GAA Sbjct: 593 GATGAGGAA 601 Score = 271 (40.7 bits), Expect = 0.043, P = 0.042 Identities = 115/175 (65%), Positives = 115/175 (65%), Strand = Plus / Plus Query: 2157 TGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAA 2214 TGCA A GA A AGGAA AG GA G AG AA A GGAG G A AGG GA Sbjct: 472 TGCA-ACAGATGAAGAGGAAGAGGAAGAAG-AGGAAGAGGAGGAGGGGGAAGAGGAAGAG 529 Query: 2215 AAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG-AGG 2272 AA AG AAGAA A GA G A GA GA GA GATGA GA TG AG GA GA AGG Sbjct: 530 GAAGAGGAAGAAGACGATG-ACGATGATGATGATGAAGACTCTGGAGCTGA-GATACAGG 587 Query: 2273 AGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 A GA GA GA GAAG TGA GATGAAGA GAA TGATGATGATGAA A G TG T Sbjct: 588 ATGATGATGAGGAAGGCTTTGACGATGAAGAGGAATTTGATGATGATGAACATGATGAT 646 >M55298 Dictyostelium discoideum plasmid Ddp2 trans-acting factor gene, Length = 5850 Plus Strand HSPs: Score = 285 (42.8 bits), Expect = 0.00018, Sum P(2) = 0.00018 Identities = 73/93 (78%), Positives = 73/93 (78%), Strand = Plus / Plus Query: 2244 AGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGA 2303 ||| || ||||||||||| || || || || || || || || ||||||||||||||||| Sbjct: 4948 AGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGA 5007 Query: 2304 AGAAGATGATGATGATGAATAAGTTGGTTCTAG 2336 |||||||| ||||| || ||| ||| | | | Sbjct: 5008 TGAAGATGAAGATGAAGACGAAGATGGGTATTG 5040 Score = 273 (41.0 bits), Expect = 0.00061, Sum P(2) = 0.00061 Identities = 73/96 (76%), Positives = 73/96 (76%), Strand = Plus / Plus Query: 2233 GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGAT 2292 ||||| || || || || ||||||||||| || || || || || || || || |||||| Sbjct: 4949 GAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAT 5008 Query: 2293 GAAGATGAAGAAGAAGATGATGATGATGAATAAGTT 2328 ||||||||||| ||||| || |||| | | | || Sbjct: 5009 GAAGATGAAGATGAAGACGAAGATGGGTATTGAATT 5044 Score = 271 (40.7 bits), Expect = 0.00075, Sum P(2) = 0.00075 Identities = 77/101 (76%), Positives = 77/101 (76%), Strand = Plus / Plus Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A AAGA G AAGA GA GA GA GA GAAGATGAAGA GA GA GA GA GA GA GA G Sbjct: 4948 AGAAGATG-AAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAG 5006 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 A GAAGATGAAGATGAAGA GAAGATG AT TGAAT A Sbjct: 5007 ATGAAGATGAAGATGAAGACGAAGATGGGTAT--TGAATTA 5045 Score = 179 (26.9 bits), Expect = 0.00018, Sum P(2) = 0.00018 Identities = 255/455 (56%), Positives = 255/455 (56%), Strand = Plus / Plus Query: 1543 AAAAAACCACAGCATCACTAAGTTAAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAAT 1602 AAAAA CC CA AT A TA TTAA TTAC T T T TG T TTAAT Sbjct: 2034 AAAAACCCTCAATATAAATA--TTAA-TTACTTTGGTTTTTTT-TGATTTTTTTTTTAAT 2089 Query: 1603 AAGATTAAGGA---AATCTATAACTC-TTATAG-TTCAGTA-AATTGAAATATTAAATAC 1656 AA TTAA AATCT TA CT TTATA TT TA AA T AT A ATAC Sbjct: 2090 AAATTTAAAATTTTAATCTCTATCTAATTATACCTTTTTTATAAATTTTGGATAATATAC 2149 Query: 1657 TTAATTTTCAGC--TTTAGTCATTCTGAAAAGTGTTTATTTCTAGATGTTTCTTAACCTA 1714 AATTTT A C TTT G CAT AA T TT TTT TA T TT TAA T Sbjct: 2150 A-AATTTTTAACAATTTTGGCATGAC-AATTTTAATTTTTTTTATTTTTTGAATAATTTT 2207 Query: 1715 ATTGCATGTTTATTG-ACAAATTACCTTTTTTTTTTAAGACCACATTTCCTACT-AAGGA 1772 TT T TTT TT A AAATT C TTTTTTTTTT A TTT T T AA Sbjct: 2208 TTTTTTTTTTTTTTTTAAAAATTTCTTTTTTTTTTTTTTT--ATTTTTAATTTTTAATTT 2265 Query: 1773 TTAAGGT-CTGACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGTGGCAGTGT 1831 TTA T C ACA T T A T TA T TTT TT ATT AA T T T Sbjct: 2266 TTATTTTTCCCACACTTTCATT-T-TATTTTATTTTATTT-ATTGTAAAT-TCATTTTAT 2321 Query: 1832 CTACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAAT-AGAG--TTAGGATCTGGTAGA 1888 TA TTTAAT AAA T T TT T TTTTA T A AG TT A TGG GA Sbjct: 2322 TTATT-TTTAATTAAATAGTTTTGGTT-TAATTTTATTCAAAGATTTTAAAAATGGACGA 2379 Query: 1889 TAATTGCACCTCAATGAGGCATAACTTTGCAAATATTAGACTATGCCATTTC-ATGAGTT 1947 A TT A TC TG GG ATA TTT AA TT TA C TTT A GA TT Sbjct: 2380 -ACTT--ATTTCT-TG-GG-ATAGGTTTTTTAAGTTTTTTGTAATACTTTTGGAAGAATT 2433 Query: 1948 -ATAGATTGTTATAATGATCTTGTATTTTTATGT-TCATTTATTGAAGTTCT 1997 A AG TTGT A A AT TGT TTT GT TC TTAT GA TTCT Sbjct: 2434 CAAAGGTTGTAAAAGAAATGATGTGCGTTTGAGTGTCGATTAT-GACATTCT 2484 Score = 153 (23.0 bits), Expect = 0.0024, Sum P(2) = 0.0024 Identities = 169/296 (57%), Positives = 169/296 (57%), Strand = Plus / Plus Query: 1833 TACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAATAGAGTTAGGATCTGGTAGATAAT 1892 TAC TTT AT A A TC T T CT GTTTT T AG TAG AT T A ATAA Sbjct: 1713 TACTATTTGATGACATTCATTTT-TCCTAGTTTTTTTTTAGATAG-ATATAAAA-ATAAA 1769 Query: 1893 TGCACCTCA-A-TGAGGC-AT-AACTTTGCA-AATATTAGACTATGCCATTTCATGAGTT 1947 T A C A A T A AT AA TTG A AATATT A T T TTT AT A TT Sbjct: 1770 TCGATCATATACTTAATTTATTAAGATTGAATAATATTTTAAT-T----TTTAATAAATT 1824 Query: 1948 ATAGATTGTTATAATGAT-CTTGTATTTTTA--TGTTCATTTATTGAAGTTCTAGTTATT 2004 TA TT TT T T T CTT T TTTTTA T TT A T TT TT TA TTA Sbjct: 1825 CTACTTTTTTTTTTTTTTTCTTTTTTTTTTAAATTTTAAAATTTTTTTTTTTTA-TTAGA 1883 Query: 2005 TCTGG-AGTTGCTGTGGATCTACAGAT-ACGTGATATTTTGGTATAACTAGAATCTTGAT 2062 TCT A TT AT T A AT A G TATTTT ATA A AA CT A Sbjct: 1884 TCTCATAATTAAAAATCATTTTAAAATTAAAAGTTATTTTTAAATATGCAAAAACTATAA 1943 Query: 2063 TTCTTTCATAAAGTTCTGCCA--TGTT--CTATTTCTTTCCTTAATCTTTTTTTCTTCCC 2118 T AT AGTT CCA T TT CTATTTCTTT TT T TTTTTTT TT Sbjct: 1944 AAAACTAATGTAGTTTAACCAACTTTTTTCTATTTCTTTTTTTTTTTTTTTTTTTTTTT- 2002 Query: 2119 TACTGT 2124 TACT T Sbjct: 2003 TACTTT 2008 >X93208 Rattus sp. mRNA for NRD2 convertase Length = 3785 Plus Strand HSPs: Score = 323 (48.5 bits), Expect = 0.00018, P = 0.00018 Identities = 85/109 (77%), Positives = 85/109 (77%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAGAAG-GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AAA CA GAAA AA GA GA GAGGAAGA GA GAAGA GAAGAGGA GAGG GGA Sbjct: 461 AAAACAGGAAATGCAACAGATGAAGAGGAAGAGGAAGAAGAGGAAGAGGAGGAGGGGGAA 520 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 GAGGAAGA GAAGA GA GAAGA GA GA GA GATGATGATGA GA T Sbjct: 521 GAGGAAGAGGAAGAGGAAGAAGACGATGACGATGATGATGATGAAGACT 569 Score = 315 (47.3 bits), Expect = 0.00042, P = 0.00042 Identities = 91/119 (76%), Positives = 91/119 (76%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAGAAG-GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAG 2274 AAA CA GAAA AA GA GA GAGGAAGA GA GAAGA GAAGAGGA GAGG GGA Sbjct: 461 AAAACAGGAAATGCAACAGATGAAGAGGAAGAGGAAGAAGAGGAAGAGGAGGAGGGGGAA 520 Query: 2275 GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCT 2334 GAGGAAGA GAAGA G GAAGA GA GA GA GATGATGATGATGAA A TGG CT Sbjct: 521 GAGGAAGAGGAAGA-G--GAAGAAGACGATGACGATGATGATGATGAAGACTCTGGAGCT 577 Score = 297 (44.6 bits), Expect = 0.0028, P = 0.0028 Identities = 121/187 (64%), Positives = 121/187 (64%), Strand = Plus / Plus Query: 2138 TGCTTTGGAAGGA-TATTGCTG-CATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAA 2195 TG TTG A G T TTG T CA ATC A TAA G AG T A CAG AAA Sbjct: 415 TGGCTTGCAGGCTCTTTTGATTTCAGATCTAAGTAATGTGGAGGGTAAAACAGGAAATGC 474 Query: 2196 GGGAGTTGTCAAGGCTGAAAAAAGCA-AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAG 2254 AG TG AGG GA AA G A AG AA AG AGGA G GGA GA GA GAGGAAG Sbjct: 475 AACAGATGAAGAGGAAGAGGAA-GAAGAGGAAGAGGAGGAGGGGGAAGAGGAAGAGGAAG 533 Query: 2255 ATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGA-AGAAGATGAT 2313 A GAAGA GA GA GA GA GA GA GATGAAGA TG AG TGA GA A A GATGAT Sbjct: 534 AGGAAGAAGACGATGACGATGATGATGATGAAGACTCTGGAGCTGA-GATACAGGATGAT 592 Query: 2314 GATGATGAA 2322 GATGA GAA Sbjct: 593 GATGAGGAA 601 Score = 271 (40.7 bits), Expect = 0.043, P = 0.042 Identities = 115/175 (65%), Positives = 115/175 (65%), Strand = Plus / Plus Query: 2157 TGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAA 2214 TGCA A GA A AGGAA AG GA G AG AA A GGAG G A AGG GA Sbjct: 472 TGCA-ACAGATGAAGAGGAAGAGGAAGAAG-AGGAAGAGGAGGAGGGGGAAGAGGAAGAG 529 Query: 2215 AAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG-AGG 2272 AA AG AAGAA A GA G A GA GA GA GATGA GA TG AG GA GA AGG Sbjct: 530 GAAGAGGAAGAAGACGATG-ACGATGATGATGATGAAGACTCTGGAGCTGA-GATACAGG 587 Query: 2273 AGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 A GA GA GA GAAG TGA GATGAAGA GAA TGATGATGATGAA A G TG T Sbjct: 588 ATGATGATGAGGAAGGCTTTGACGATGAAGAGGAATTTGATGATGATGAACATGATGAT 646 >U35323 Mus musculus H2-M alpha chain (H2-Ma) gene, H2-M beta 2 chain Length = 53,419 Plus Strand HSPs: Score = 266 (39.9 bits), Expect = 0.083, P = 0.079 Identities = 108/152 (71%), Positives = 108/152 (71%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAA-A-AAGCAAGAAA 2226 AAGGA AAG GA G AG A A A GGAG G AAGG GAA A AAG A GAA Sbjct: 23930 AAGGAGAAGGA-GAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGA-GAAG 23986 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA-GGATGAGGAGGAGGAGGAAGATGA 2285 AGAAGGA AGGAG A GA AGGA GA G AGA GGA AGGAG AGGAG A GA GA Sbjct: 23987 GAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGACGGAGAAGGAGAAGGAGAAGGA-GA 24044 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 AGAAGA G AGA GAAGAAGAAGA A GA GA GAA Sbjct: 24045 AGAAGAAGGAGAAGAAGAAGAAGAC-A-GA-GAGGAA 24078 Minus Strand HSPs: Score = 324 (48.6 bits), Expect = 0.00019, P = 0.00019 Identities = 84/108 (77%), Positives = 84/108 (77%), Strand = Minus / Plus Query: 2318 TCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCT 2259 || || || ||||||||||| ||||| |||||||| ||||| || || || || || ||| Sbjct: 43492 TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 43551 Query: 2258 TCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCA 2211 || ||||| || |||||||| ||||| || ||||| | ||| || | Sbjct: 43552 TCTTCTTCTTCTTCTTCCTCTTCTTCTTTTTTTTTTAAGATTTATTAA 43599 Score = 288 (43.2 bits), Expect = 0.0082, P = 0.0082 Identities = 82/111 (73%), Positives = 82/111 (73%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 43493 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 43552 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTT 2216 C TC TCTTC TCTTCCTC TCTTC T T TT T TTT TT TTT Sbjct: 43553 CTTCTTCTTCTTCTTCCTCTTCTTCTTTTTTTTT-TAAGATTTATTAATTT 43602 >AC000399 Genomic sequence from Mouse 9, complete sequence. Length = 140,554 Plus Strand HSPs: Score = 324 (48.6 bits), Expect = 0.00019, P = 0.00019 Identities = 136/206 (66%), Positives = 136/206 (66%), Strand = Plus / Plus Query: 2165 GAGCTAAAG-GAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC-AAGGCTGAAAAAAGCAA 2222 GAG A AG GA AG GA G AG A AA A GGAG G AAGG GAA A G AA Sbjct: 133594 GAGAGAGAGAGAGAGAGAGA-GAAGAAGAAGAAGGAGAAGGAGAAGGA-GAAGGA-G-AA 133649 Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG-AGGATGAGGAGGAGGAGGAAG 2281 G A AAG AG A GAG AGGA A GAG A GA GAAG AG A GAG AG AG AG AAG Sbjct: 133650 GGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGA-GAAGGAGAAGGAGAAGAAGAAG-AAG 133707 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCAG 2341 A GAAGAAGA GAAGA GAAGAAGAAGA GA GA GA GAA AAG G A G AG Sbjct: 133708 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAAAGGAG 133767 Query: 2342 TTTTTTTTTTCTTGTCTATAA-AGCATTTA 2370 T T TTTC TG C A AA AGC TT A Sbjct: 133768 AGTGTACTTTCATGCCAACAACAGCTTTGA 133797 Minus Strand HSPs: Score = 322 (48.3 bits), Expect = 0.00023, P = 0.00023 Identities = 108/154 (70%), Positives = 108/154 (70%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC TC TC T TTCTTC TC TCTTC TCTTC TC T TTCCTCCTCCTCCTC TC Sbjct: 119380 TCCTCTTCTTCCTTTTCTTCCTCCTCTTCCTCTTCCTCCTTTTCCTCCTCCTCCTCCTCT 119439 Query: 2261 TC-T--TCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCTTG 2205 TC T TC TCTTC TC TC TCCTCCTCTTCCT CT T CT CTT T TC CCTT Sbjct: 119440 TCCTCCTCCTCTTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTC-CTTCTCTCCTCCTTC 119498 Query: 2204 ACAACTCCCTTTTTTGCTGCATCAGG-CTTTCCTT 2171 C CT CT T T CT C TC CTTTCC T Sbjct: 119499 TCCTCTTTCTCTCCTCCTCCTTCTCCTCTTTCCCT 119533 Score = 322 (48.3 bits), Expect = 0.00023, P = 0.00023 Identities = 114/169 (67%), Positives = 114/169 (67%), Strand = Minus / Plus Query: 2353 AGAAAAAAA-AAACTGCGCTAGAACCAACTTATTCATCATCATCATCTTCTTCTTCATCT 2295 AGAA AA AAACT C C CC CTT TTC T TC TC TC TCTTC TC TC Sbjct: 119357 AGAAGCAAGTAAACTTCTCCTCCTCCT-CTTCTTCCTTTTCTTCCTCCTCTTCCTCTTCC 119415 Query: 2294 TCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCT 2235 TC T TTC TC TC TCCTCCTC TCCTC TCCTCTTC TC TCCTC TC TC TCCTC Sbjct: 119416 TCCTTTTCCTCCTCCTCCTCCTCTTCCTCCTCCTCTTCTTCCTCCTCCTCCTCTTCCTCC 119475 Query: 2234 TCCTTCTTTTTCT-TGCTTTTT-TCAGCCTTGACAACTCCCTTTTTTGCT 2187 TCCT CT TTCT T CT TT TC C TT C CTCC TT T CT Sbjct: 119476 TCCTCCTCCTTCTCTCCTCCTTCTCCTCTTTCTCTCCTCCTCCTTCTCCT 119525 Score = 305 (45.8 bits), Expect = 0.0014, P = 0.0014 Identities = 125/190 (65%), Positives = 125/190 (65%), Strand = Minus / Plus Query: 2321 TCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCC 2262 TC TC TC TC TC TC TC TC TCTTC TC TC TC TCTTCCTCCTCCTCCTC T C Sbjct: 119428 TCCTCCTCCTCTTCCTCCTCCTCTTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTTC 119487 Query: 2261 TCTTCATCTTCCTCATCTT-C-CTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCCTTGA 2204 TCT C CTTC TC TCTT C CTCCTC TCCTTCT T CTT C T TC CCT Sbjct: 119488 TCTCCTCCTTC-TCCTCTTTCTCTCCTCCTCCTTCTCCT-CTTTCCCTCCTCCTCCTCCT 119545 Query: 2203 CAAC-TCCCTTTTT-TGCTGCATCAGGCTTTCCTTTAGCTCGATATG-CAGCAATATCCT 2147 C C T CTT TT T TG AT G T TC T TAGC C A TG C CAA TC T Sbjct: 119546 CCTCCTTTCTTCTTCTTTTGGATATAG-TCTCATGTAGCCCAAACTGTCCTCAAATTCAT 119604 Query: 2146 TCCAAAGCAAAGG 2134 AGCA AGG Sbjct: 119605 AATGTAGCATAGG 119617 >U36888 Triticum aestivum clone TCT4 microsatellite sequence. Length = 390 Plus Strand HSPs: Score = 267 (40.1 bits), Expect = 0.00019, P = 0.00019 Identities = 89/120 (74%), Positives = 89/120 (74%), Strand = Plus / Plus Query: 2200 GTT-GT-CAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATG 2257 GTT GT C AGG T AA AA G A GAAAAAG AGGA GAG AG AAGA GA GAAGA G Sbjct: 85 GTTAGTGCTAGGTTTAAGAA-G-AGGAAAAAGGAGGAGGAGAAG-AAGAAGAAGAAGAAG 141 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAA-GATGAAGAAGAAGATGATGAT 2316 AAGA GA GA GA GA GA GAA A GAA AAG GAA GA GAAGAAGAAGA A GA Sbjct: 142 AAGAAGAAGAAGAAGAAGAAGAA-AGGAAAAAGGAGAAAGAAGAAGAAGAAGAAAAAGAG 200 Query: 2317 GAT 2319 G T Sbjct: 201 GGT 203 Score = 266 (39.9 bits), Expect = 0.00021, P = 0.00021 Identities = 98/136 (72%), Positives = 98/136 (72%), Strand = Plus / Plus Query: 2200 GTT-GT-CAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATG 2257 GTT GT C AGG T AA AA G A GAAAAAG AGGA GAG AG AAGA GA GAAGA G Sbjct: 85 GTTAGTGCTAGGTTTAAGAA-G-AGGAAAAAGGAGGAGGAGAAG-AAGAAGAAGAAGAAG 141 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 AAGA GA GA GA GA GA GAA A GAA AAG GAA A GAAGAAGAAGA GA A G Sbjct: 142 AAGAAGAAGAAGAAGAAGAAGAA-AGGAAAAAGGAGAA-A-GAAGAAGAAGAAGAAAAAG 198 Query: 2318 ATGAATAAGTTGGT-TCTA 2335 A G T GT GGT TC A Sbjct: 199 AGGGTTC-GTCGGTGTCGA 216 >X06343 Cowpox virus (CPV) 160K gene 5' end for major component of A-type Length = 1021 Plus Strand HSPs: Score = 315 (47.3 bits), Expect = 0.00023, P = 0.00023 Identities = 87/117 (74%), Positives = 87/117 (74%), Strand = Plus / Plus Query: 2211 TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 | || | ||||| | ||| | |||| || || ||||| || ||||| || ||||| || Sbjct: 140 TCAAGATAGCAAAATAAATATCGAAGTTGAAGATGATGATGATGATGATGATGATGATGA 199 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGT 2327 || || || ||||| || ||||| ||||| || || |||||||||||||| | || Sbjct: 200 TGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGT 256 Score = 305 (45.8 bits), Expect = 0.00067, P = 0.00067 Identities = 111/165 (67%), Positives = 111/165 (67%), Strand = Plus / Plus Query: 2188 GCAAAAAAGGGAGTTGTCA-AGG-CTGAAAAAAGCAAGAAAAAGAAGGAA-GAGGAGGAA 2244 GC AAAA G A TG A AGG C A AAG AG AAAA AA A GA G GAA Sbjct: 111 GCTGAAAATGCAACTGATACAGGACATCATCAAGATAGCAAAATAAATATCGAAGTTGAA 170 Query: 2245 GATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAA 2304 GATGA GA GATGA GA GATGA GA GA GA GA GATGA GA GATGA GATGA GA Sbjct: 171 GATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT 230 Query: 2305 GAAGATGATGATGATGAATAAGTTGGTTCTAG-CGCAGTTTTTTTT 2349 GA GATGATGATGATGA A G TG T TAG CG G T TT T Sbjct: 231 GATGATGATGATGATGATGATGATG-TCATAGACGATGATGATTAT 275 Score = 301 (45.2 bits), Expect = 0.0010, P = 0.0010 Identities = 103/143 (72%), Positives = 103/143 (72%), Strand = Plus / Plus Query: 2183 ATGCAGCAAAAAAGGGAGTTG-TCAAGGCTGAAAAAAGCAAGAAAAAGAAG--GAAGAGG 2239 ATGCA C A A GGA T TCAAG G AAAA AA A A GAAG GAAGA G Sbjct: 118 ATGCAACTGATACAGGACATCATCAAGATAGCAAAAT--AA-ATATCGAAGTTGAAGATG 174 Query: 2240 AGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATG 2299 A GA GATGA GA GATGA GA GATGA GA GA GA GA GATGA GA GATGA GATG Sbjct: 175 ATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATG 234 Query: 2300 AAGAAGAAGATGATGATGATGA-ATA 2324 A GA GA GATGATGATGATG ATA Sbjct: 235 ATGATGATGATGATGATGATGTCATA 260 >L21695 Human (clone pHG4) prothymosin alpha gene, complete cds. Length = 322 Plus Strand HSPs: Score = 267 (40.1 bits), Expect = 0.00023, P = 0.00023 Identities = 87/122 (71%), Positives = 87/122 (71%), Strand = Plus / Plus Query: 2218 AGCAAGAAAAAGA-AG-GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGG 2275 AGCAAGA GA A GAAG GA GAAGA AGGAAGA G G GGA GA GAGGAGG Sbjct: 122 AGCAAGAGGCTGACAATGAAGTAGATGAAGAACAGGAAGAAGGTGGGGAGGAAGAGGAGG 181 Query: 2276 AGGAAGATGAAGAAGATGAAGATGAAGAAGAA-GATGATGATGATGAATAAGTTGGTTCT 2334 AGGAAGA GAAG GA G GA GAAGAAG A G GATGA GATGA AAG TG TC Sbjct: 182 AGGAAGAAGAAGGTGAGGGTGAGGAAGAAGGATGGAGATGAAGATGAGGAAGCTGAGTC- 240 Query: 2335 AGC 2337 AGC Sbjct: 241 AGC 243 Score = 208 (31.2 bits), Expect = 0.11, P = 0.11 Identities = 114/188 (60%), Positives = 114/188 (60%), Strand = Plus / Plus Query: 2142 TTGGAAGGATATTGCTG-CATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGA 2199 T GG AG A GCTG CA AT AG TA A GAA A C GA G AG AGG A Sbjct: 117 TGGGGAGCAAGAGGCTGACA-ATGAAG-TAGATGAAGAACAGGAAGAAGGTGGGGAGGAA 174 Query: 2200 GTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAG-A-GGAG--GAAGATGAGGAAGA 2255 G G AGG GAA AA G AG AG A GAAG A GGAG GAAGATGAGGAAG Sbjct: 175 GAGGAGGAGGAAGAAGAAGGTGAGGGTGAGGAAGAAGGATGGAGATGAAGATGAGGAAGC 234 Query: 2256 TGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 TGA G T G AG GG AG TGAAGA GATGA GATGA GA G GAT A A Sbjct: 235 TGAGTCAGCTACCGGCAAGTGGGCAGCTGAAGATGATGAGGATGACGATGTTGAT-ACCA 293 Query: 2316 TGATGAATAAG 2326 GA G A AAG Sbjct: 294 AGAAGCAGAAG 304 >AC002464 Human BAC clone RG331P03, complete sequence. Length = 123,805 Minus Strand HSPs: Score = 322 (48.3 bits), Expect = 0.00023, P = 0.00023 Identities = 116/163 (71%), Positives = 116/163 (71%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 43722 CTTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 43781 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCC 2208 C TC TCTTC TCT C TC CTTC TCCT TCCTTCT TTCT CT T TC CC Sbjct: 43782 CTTCTTCTTCTTCTCCTTCTCCTTC-TCCTTCTCCTTCTCCTTCTC-CTCCTCCTCCTCC 43839 Query: 2207 T-TGACAACTCCCTTTTTTGCTGC-ATC-AGGCTTTC-CTTTAGCTC 2165 T T A CT C T TTTT CTG AT AG CTT C CT T CTC Sbjct: 43840 TCTTATT-CTTCTTCTTTT-CTGAGATGGAGTCTTGCTCTGTCACTC 43884 Score = 318 (47.7 bits), Expect = 0.00036, P = 0.00036 Identities = 104/145 (71%), Positives = 104/145 (71%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC T TC T TCTTCTTCTTC TCTTC TCTTCTTC TCTTC TC TC TC T Sbjct: 43710 CTTGTTCTTGTTCTTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT 43769 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTT--TTCAGC 2209 C TC TCTTC TCTTC TC TCTTC TCCT TCCTTCT TTCT CTT T TTC C Sbjct: 43770 CTTCTTCTTCTTCTTCTTCTTCTTC-TCCTTCTCCTTCTCCTTCTC-CTTCTCCTTCT-C 43826 Query: 2208 CTTGACAACTCCCTTTTTTGCTGCATC 2182 CT C C CCT TT T CT C TC Sbjct: 43827 CTCCTCCTCCTCCTCTTATTCTTCTTC 43853 >U88154 Human proline and glutamic acid rich nuclear protein isoform mRNA, Length = 3211 Plus Strand HSPs: Score = 320 (48.0 bits), Expect = 0.00024, P = 0.00024 Identities = 118/160 (73%), Positives = 118/160 (73%), Strand = Plus / Plus Query: 2165 GAGCTA-AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGC 2220 GAG A AAGGA AAG GA G AG A AA A G AG G AGG GAA AA AAG Sbjct: 2407 GAGGAAGAAGGAGAAGAG-GAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAG- 2464 Query: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGA-T--GAGGAAGATGAAGAGGATGAGGAGGAGGAG 2277 A GAA AAGA GGAAGAGGAGGAAGA T GAGGAAGA GAAGAGGATGA GAGGA A Sbjct: 2465 AGGAAGAAGA-GGAAGAGGAGGAAGACTTTGAGGAAGAGGAAGAGGATGAAGAGGA--AT 2521 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 A TGAAGA GA GAAGA GA GAAGAAGA TGA GA GAAT Sbjct: 2522 -ATTTTGAAGAGGAAGAAGAGGAGGAAGAAGAGTTTGAGGAAGAAT 2566 Score = 289 (43.4 bits), Expect = 0.0063, P = 0.0063 Identities = 95/136 (69%), Positives = 95/136 (69%), Strand = Plus / Plus Query: 2194 AAG-GGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGA 2252 AAG GGA TTG CA G T AA A CAA A A A GAAGAGGAGGA GA GA G Sbjct: 2360 AAGAGGATTTGACA--GTTATTAATATCAACAGCAGTGATGAAGAGGAGGAGGAAGAAGG 2417 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGA 2312 AGA GA GA GA GA GA GA GA GAAGA GA GAAGA GAAGA GA GAAGAAGA GA Sbjct: 2418 AGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGGA 2477 Query: 2313 TGATGATGAATAAGTTG 2329 GA GA GAA A TTG Sbjct: 2478 AGAGGAGGAAGACTTTG 2494 Score = 285 (42.8 bits), Expect = 0.0096, P = 0.0096 Identities = 113/171 (66%), Positives = 113/171 (66%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAG A AAG GA G AG A AA AGG AG G A G GAA AA AG AAGA A Sbjct: 2426 AAGAAGAAGAA-GAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGGAAGAGGAG 2484 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG A GAGGAAGA GA GA GATGAAGAGGA A GA GAGGAAGA GA GA Sbjct: 2485 GAAG-ACTTTGAGGAAGAGGAAGAGGATGAAGAGGAATATTTTGAAGAGGAAGAAGAGGA 2543 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG-GTTCTAGCGCAG 2341 GA GAAGA GA GAAGA TGA GA GAA AAG TG GTT AG G AG Sbjct: 2544 GGAAGAAGAGTTTGAGGAAGAATTTGAGGAAGAAGAAGGTGAGTTAGAG-GAAG 2596 Score = 263 (39.5 bits), Expect = 0.098, P = 0.093 Identities = 93/135 (68%), Positives = 93/135 (68%), Strand = Plus / Plus Query: 2195 AGGGAGTTGTCAAGGCTGAA-A--AA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAG 2250 AGG AG G AGG TGAA A AA A GAA A GAAG AAGAGGAGGAAGA GAG Sbjct: 2495 AGGAAGAGGAAGAGGATGAAGAGGAATATTTTGAAGAGGAAG-AAGAGGAGGAAGAAGAG 2553 Query: 2251 GAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGAT 2310 GA GAAGA TGAGGA GA GA G GA AGA GA GAAGA GAAGA GA GAT Sbjct: 2554 TTTGAGGAAGAATTTGAGGAAGAAGAAGGTGAGTTAGAGGAAGAAGAAGAAGAGGAGGAT 2613 Query: 2311 GATGATGATGAATAAG 2326 GA GA GA GAA AAG Sbjct: 2614 GAGGAGGAGGAAGAAG 2629 Score = 241 (36.2 bits), Expect = 1.0, P = 0.63 Identities = 91/135 (67%), Positives = 91/135 (67%), Strand = Plus / Plus Query: 2170 AAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAA-AGCAAGAAA 2226 A AGGAA A TGA G AG AA AA GGAG A AG TGA AA A GA Sbjct: 2514 AGAGGAATATTTTGAAG-AGGAAGAAGAGGAGGAAGAAGAGTTTGAGGAAGAATTTGAGG 2572 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AAGAAG AAG GAG AGA GA GAAGA GAAGAGGA GA GAGGAGGAGGAAGA GAA Sbjct: 2573 AAGAAG-AAGGTGAGTTAGAGGAAGAAGAAGAAGAGGAGGATGAGGAGGAGGAAGAAGAA 2631 Query: 2287 GAAGATGAAGATGAAGA 2303 GA GA G GAAGA Sbjct: 2632 CTGGAAGAGGTGGAAGA 2648 >X15382;X17412 D.discoideum vegetative specific gene V18 gene for ribosomal Length = 2306 Plus Strand HSPs: Score = 319 (47.9 bits), Expect = 0.00024, P = 0.00024 Identities = 245/407 (60%), Positives = 245/407 (60%), Strand = Plus / Plus Query: 1925 TAGACTATGCCATTTCATGAGTTATAGATTGTTATAATGATCTTG-TATTTTTATGTTCA 1983 TAGA T T ATTTC T AGTT A TT TT TA ATCTT T TT AT TT A Sbjct: 3 TAGAGTTTAA-ATTTC-TCAGTTCCAACTTTTT-TAGA-ATCTTCCTCATTAAATTTTAA 58 Query: 1984 TTTATTGAAG--TTCTAGTTATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATTT 2041 T TAT AA TTC A T A TC A T CT T TCT G T C TGAT TTT Sbjct: 59 TATATCAAATAATTC-ATTCACCTCATTA--TCCTCTTCCTCTG--GCT-CTTGATTTTT 112 Query: 2042 TGGTATAA-CTAGAATCTTGATTTCTTT-CATAAAGTTCTGCCATGTTCTATTTCTTTCC 2099 TA A CT A TCTT T T TTT C T A TCT C T TCTAT T TTTCC Sbjct: 113 ATTTAAATTCTC-ATTCTTTTTATTTTTACTTTTA--TCTTCT-TCATCTATAT-TTTCC 167 Query: 2100 TTAATCTTTTTTTCTTCCCT--ACTGTTT-TATCCTCCCTTTGC-TTTGGAAGGATATTG 2155 TTA TCTT TT TTC T A TG T TA C CT C TTT AA A A Sbjct: 168 TTA-TCTTCTTCAGTTCGATCGATTGGGTGTAATAACTCTAAACATTTCTAAAAAAAAAT 226 Query: 2156 CTGCATATCGAGC--TAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGA 2213 ATA A TA AG AAA T A CA A A A A TT T A G TGA Sbjct: 227 AAAAATAAAAAAAATTATAGTAAATA-TAAAACATTAGTATATTTAATTATTATGA-TGA 284 Query: 2214 AAAA-AGCA--A-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG 2269 AA A A A GA AA AA AAGA GA GA GATGA GA GATGA GA GATGA G Sbjct: 285 TAACTATGATTATGATGAATAATCAAGATGATGATGATGATGATGATGATGATGATGATG 344 Query: 2270 AGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 A GA GA GA GATGA GA GATGA GATGA GA GA GATGATGATGATGA A G TG Sbjct: 345 ATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATCATGATG 404 Query: 2330 GT 2331 T Sbjct: 405 AT 406 Score = 287 (43.1 bits), Expect = 0.0072, P = 0.0072 Identities = 243/407 (59%), Positives = 243/407 (59%), Strand = Plus / Plus Query: 1925 TAGACTATGCCATTTCATGAGTTATAGATTGTTATAATGATCTTG-TATTTTTATGTTCA 1983 TAGA T T ATTTC T AGTT A TT TT TA ATCTT T TT AT TT A Sbjct: 3 TAGAGTTTAA-ATTTC-TCAGTTCCAACTTTTT-TAGA-ATCTTCCTCATTAAATTTTAA 58 Query: 1984 TTTATTGAAG--TTCTAGTTATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATTT 2041 T TAT AA TTC A T A TC A T CT T TCT G T C TGAT TTT Sbjct: 59 TATATCAAATAATTC-ATTCACCTCATTA--TCCTCTTCCTCTG--GCT-CTTGATTTTT 112 Query: 2042 TGGTATAA-CTAGAATCTTGATTTCTTT-CATAAAG-TTCTGCCATGTTCTATTT-CTTT 2097 TA A CT A TCTT T T TTT C T A TTCT C AT T TATTT C TT Sbjct: 113 ATTTAAATTCTC-ATTCTTTTTATTTTTACTTTTATCTTCTTC-ATCTA-TATTTTCCTT 169 Query: 2098 CCTTAATCTTTTTTTCT-TCCCTACTGTTTTATC-CTCCCTTTGCTT-TGGAAGGATATT 2154 T TCTT TTC TC T GT T AT CTC TT T AA A AT Sbjct: 170 ATCT--TCTTCAGTTCGATCGATTGGGTGTAATAACTCTAAACATTTCTAAAAAAAAATA 227 Query: 2155 GCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA 2214 A A A TA AG AAA T A CA A A A A TT T A G TGA Sbjct: 228 AAAATAAAAAAAATTATAGTAAATA-TAAAACATTAGTATATTTAATTATTATGA-TGAT 285 Query: 2215 AAA-AGCA--A-GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 AA A A A GA AA AA AAGA GA GA GATGA GA GATGA GA GATGA GA Sbjct: 286 AACTATGATTATGATGAATAATCAAGATGATGATGATGATGATGATGATGATGATGATGA 345 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA--ATAA-GT 2327 GA GA GA GATGA GA GATGA GATGA GA GA GATGATGATGATGA AT A G Sbjct: 346 TGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATCATGATGA 405 Query: 2328 TGGT 2331 TG T Sbjct: 406 TGAT 409 Score = 277 (41.6 bits), Expect = 0.021, P = 0.021 Identities = 239/422 (56%), Positives = 239/422 (56%), Strand = Plus / Plus Query: 1910 TAACTTTGCAAATATTAGACTATGCCATTT-CATGAGTTATAGATTGTTATAATGATCTT 1968 TAA TTT A ATAT A A AT C ATT C T A TTAT T T T G TCTT Sbjct: 49 TAAATTTTAATATATCAAATAATTC-ATTCACCTCA-TTATCCTCT-TCCTCTGGCTCTT 105 Query: 1969 GTATTTTTATGTTCATTTATTGAAGTTCTAGTTATTTCTGGAGTTG-CTG-TGGATCTAC 2026 G ATTTTTAT TT A TT T A TTCT TTATTT T TT CT T ATCTA Sbjct: 106 G-ATTTTTAT-TTAAATTCTC--A-TTCTTTTTATTTTTACTTTTATCTTCTTCATCTAT 160 Query: 2027 AGATACGTGATATT-TTG-GTATAACTAGAATCT-TG-ATTT-CTTTCATAAAGTTCTGC 2081 A T C T AT TT TT GT A T GA T TG A T CT T A A A TTCT Sbjct: 161 ATTTTCCTTATCTTCTTCAGTTCGA-TCGATTGGGTGTAATAACTCTAA-ACATTTCTAA 218 Query: 2082 CATGTTCTATTTCTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCT 2141 A TA T AAT T T T AC T TAT T TT T Sbjct: 219 AAAAAAATAAAAATAAAAAAAATTATAGTAAATATAAAACATTAGTATATTTAATTAT-T 277 Query: 2142 TTGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGT 2201 TG A G ATA TG TAT GA A A AAG TGATG G A A G G Sbjct: 278 ATG-ATG-ATAACTATGATTAT-GATGAATAATCAAGA-TGATGATGATGATGATGATGA 333 Query: 2202 TGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG 2260 TG A G TGA A A A GA A GA G A GA GA GA GATGA GA GATGA G Sbjct: 334 TGATGATGATGATGATGATGATGATGATGATG-ATGATGATGATGATGATGATGATGATG 392 Query: 2261 AGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 A GAT A GA GA GA GA GATGA GA GATGA ATGA GA GA GATGATGATGATG Sbjct: 393 ATGATCATGATGATGATGATGATGATGATGATGATCATGATGATGATGATGATGATGATG 452 Query: 2321 AATAAGTTGGT 2331 A A G TG T Sbjct: 453 ATCATGATGAT 463 Score = 264 (39.6 bits), Expect = 0.082, P = 0.079 Identities = 116/179 (64%), Positives = 116/179 (64%), Strand = Plus / Plus Query: 2147 AGGATATTGCTGCAT-ATCGA-GCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTG- 2203 A GAT TG TG AT AT GA G T A G A TGATG G A A G G TG Sbjct: 339 ATGATGATGATG-ATGAT-GATGATGATGATGATGATGATGATGATGATGATGATGATGA 396 Query: 2204 TCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 TCA G TGA A A A GA A GA G A A GA GA GATGA GA GATGA GA Sbjct: 397 TCATGA-TGATGATGATGATGATGATGATG-ATCATGATGATGATGATGATGATGATGAT 454 Query: 2263 GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAA 2322 ATGA GA GA GA GA GATGA GA GAT A GATGA GA GA GATGATGATGATGA Sbjct: 455 CATGATGATGATGATGATGATGATGATGATCATGATGATGATGATGATGATGATGATGAT 514 Query: 2323 TAA 2325 TAA Sbjct: 515 TAA 517 Score = 261 (39.2 bits), Expect = 0.11, P = 0.11 Identities = 117/186 (62%), Positives = 117/186 (62%), Strand = Plus / Plus Query: 2147 AGGATATTGCTGCAT-ATCGA-GCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGT 2204 A GAT TG TG AT AT GA G T A G A TGATG G A A G G TG Sbjct: 330 ATGATGATGATG-ATGAT-GATGATGATGATGATGATGATGATGATGATGATGATGATGA 387 Query: 2205 CAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGG 2263 A G TGA A A A GA A GA G A GA GA GA ATGA GA GATGA GA G Sbjct: 388 TGATGATGATCATGATGATGATGATGATG-ATGATGATGATCATGATGATGATGATGATG 446 Query: 2264 ATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 ATGA GA A GA GA GATGA GA GATGA GATGA A GA GATGATGATGATGA Sbjct: 447 ATGATGATCATGATGATGATGATGATGATGATGATGATCATGATGATGATGATGATGATG 506 Query: 2324 AAGTTGGTT 2332 A G TG TT Sbjct: 507 ATGATGATT 515 Score = 249 (37.4 bits), Expect = 0.40, P = 0.33 Identities = 73/102 (71%), Positives = 73/102 (71%), Strand = Plus / Plus Query: 2234 AAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATG 2293 | || || || ||||| || ||||| | ||||| || || || || ||||| || ||| Sbjct: 429 ATGATGATGATGATGATGATGATGATCATGATGATGATGATGATGATGATGATGATCATG 488 Query: 2294 AAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTA 2335 | ||||| || || |||||||||||| || | | ||| | Sbjct: 489 ATGATGATGATGATGATGATGATGATTAAACAATAACTTCAA 530 >D88193 Brassica rapa DNA for S-receptor kinase, complete cds. Length = 10,075 Plus Strand HSPs: Score = 321 (48.2 bits), Expect = 0.00025, P = 0.00025 Identities = 409/697 (58%), Positives = 409/697 (58%), Strand = Plus / Plus Query: 1394 ATGAAAATGTTGGTAGTCACTTCAAGTCAAAAATGAGCATTTTCAAATGGCTTGGCATAC 1453 AT AAATGTT TA T A TT A T AAA AT A ATTT AAT TT CAT C Sbjct: 6720 ATTTAAATGTTTATA-TAA-TT-ACTTTAAATATAAAAATTTGATAATT--TT--CATGC 6772 Query: 1454 AGTACAAAAACAGGCTAGA-CAAAG--T-A-ATATAGGCTATATTTTTC-TTAGTCATAT 1507 GTA AA G TA CAAA T A ATATA ATATTTTT TTA ATAT Sbjct: 6773 TGTAAGTTAATTGATTATTTCAAATCATCACATATATTTGATATTTTTTATTATATATAT 6832 Query: 1508 CCTGAAA-CATTTATGTTCTTTTCCTTTAGATACTCAAAAA-ACCACAGCATCACTA-AG 1564 T AAA CATTT T TTC TT T T GAT CT A A A CA A C CT A Sbjct: 6833 TTTAAAATCATTTTTATTCAATTATTAT-GATCCTGATCTATAATTCAA-AGCGCTGGAT 6890 Query: 1565 TTAAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAATAAGATTAAGGAAATCTATAACT 1624 TT TTA A T T T T TGT A T A TT TAAGAT AA AA T TATA T Sbjct: 6891 TTCCTTTATTAATATTTTTTTATGTTTATTCA-TT--TAAGAT-AAT-AACTATATATAT 6945 Query: 1625 CTTATAGTTCA-G-TAAATTGAAATATTAAATACTTAATTTTCAGCTTTAGTCATTCTGA 1682 T A A TT A G TAAATT AA T TTA ATA T AATT TC TTTA T AT T A Sbjct: 6946 ATAAAATTTAAAGATAAATT-AATT-TTATATA-TGAATTATCTAATTTACTAATGTTAA 7002 Query: 1683 AAAGTGTTTATTT-C-TAG-ATGTTTCTTAACCTAA-TTGC--ATGTTTATTGACAAATT 1736 T TTTA C TA AT TTT T A C TAA TT ATGTTT T GA AAAT Sbjct: 7003 CCCAT-TTTACCAACATATTATATTTAT-AGCATAAATTTTTAATGTTTGT-GA-AAATA 7058 Query: 1737 ACCTTTTTTTTTTAAGACCACATT-TCCTACTAAGG-AT-TAAGGTCTGACAGTGTAAAC 1793 A T T TT TT A CA TT TC TA T AG A TA T T A T TAAA Sbjct: 7059 AAATATATTAATTTAT--CAGTTTATCATATTTAGTTAAATACAATGTTTTATTTTAAAA 7116 Query: 1794 CTG-TAGAG-TG-CTTTTTTGCATTCAGAAGGTGGCAGTG-TCTACCCTTTAATCAAAGT 1849 TG TAGA T CT T A T A AA TG AG T T C TTT AT AAAG Sbjct: 7117 -TGATAGACATAACTATAAAATAGTAA-AATTTGATAGAACTTTTTCATTTTATAAAAGA 7174 Query: 1850 CTCTACATTCTGGTTTTAATAGAGTTAGGATCTGGTAGATAATTGCACCTC-AATGAGGC 1908 T TA AT T T TA TA A TTA AT T TAATT CA C AATGA C Sbjct: 7175 -TATATATA-TATATATA-TAAATTTATAATAACAT---TAATTTCATTACTAATGA--C 7226 Query: 1909 ATAACTT-TGCAAATATTAGACTATGCCATTTC--ATGAGTTATAGATTGTTATAATGAT 1965 A AA T TG AAATATT A TAT C ATTT AT A T A A ATTGTTATAATG T Sbjct: 7227 AAAATTAGTGAAAATATTT-A-TATACAATTTTTGATAATTAAGATATTGTTATAATGTT 7284 Query: 1966 CTTGTATTTTTATGTTCAT---TTATTGAAGTTCTAGTTATTTCTGGAGT-TGCTGTGGA 2021 TT A T TGTT A TTATT A T A TAT TC A T T T TG A Sbjct: 7285 TTTCAACACATTTGTTAAAAAATTATTTTAAATGAAAATATATCAA-ATTATATTATG-A 7342 Query: 2022 TCTAC--AGATACGTGATATTTTGGTATAACTA-GAATCTTGATTTCTTTCATAAAGTTC 2078 T TA AG TA GAT T T TA A TA G A T ATTT TT A AAA TT Sbjct: 7343 TTTAAGTAGTTAAAAGATTATATATTAGCATTAAGGAAATACATTTAATTAAAAAATTTA 7402 Query: 2079 TGCCATGTTCTA 2090 ATG TC A Sbjct: 7403 AATAATGATCCA 7414 >U88153 Human p160 mRNA, complete cds. Length = 3811 Plus Strand HSPs: Score = 320 (48.0 bits), Expect = 0.00025, P = 0.00025 Identities = 118/160 (73%), Positives = 118/160 (73%), Strand = Plus / Plus Query: 2165 GAGCTA-AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAA-AA-AAGC 2220 GAG A AAGGA AAG GA G AG A AA A G AG G AGG GAA AA AAG Sbjct: 3007 GAGGAAGAAGGAGAAGAG-GAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAG- 3064 Query: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGA-T--GAGGAAGATGAAGAGGATGAGGAGGAGGAG 2277 A GAA AAGA GGAAGAGGAGGAAGA T GAGGAAGA GAAGAGGATGA GAGGA A Sbjct: 3065 AGGAAGAAGA-GGAAGAGGAGGAAGACTTTGAGGAAGAGGAAGAGGATGAAGAGGA--AT 3121 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 A TGAAGA GA GAAGA GA GAAGAAGA TGA GA GAAT Sbjct: 3122 -ATTTTGAAGAGGAAGAAGAGGAGGAAGAAGAGTTTGAGGAAGAAT 3166 Score = 289 (43.4 bits), Expect = 0.0065, P = 0.0065 Identities = 95/136 (69%), Positives = 95/136 (69%), Strand = Plus / Plus Query: 2194 AAG-GGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGA 2252 AAG GGA TTG CA G T AA A CAA A A A GAAGAGGAGGA GA GA G Sbjct: 2960 AAGAGGATTTGACA--GTTATTAATATCAACAGCAGTGATGAAGAGGAGGAGGAAGAAGG 3017 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGA 2312 AGA GA GA GA GA GA GA GA GAAGA GA GAAGA GAAGA GA GAAGAAGA GA Sbjct: 3018 AGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGGA 3077 Query: 2313 TGATGATGAATAAGTTG 2329 GA GA GAA A TTG Sbjct: 3078 AGAGGAGGAAGACTTTG 3094 Score = 285 (42.8 bits), Expect = 0.0099, P = 0.0099 Identities = 113/171 (66%), Positives = 113/171 (66%), Strand = Plus / Plus Query: 2171 AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAA 2228 AAG A AAG GA G AG A AA AGG AG G A G GAA AA AG AAGA A Sbjct: 3026 AAGAAGAAGAA-GAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGGAAGAGGAG 3084 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GAAG A GAGGAAGA GA GA GATGAAGAGGA A GA GAGGAAGA GA GA Sbjct: 3085 GAAG-ACTTTGAGGAAGAGGAAGAGGATGAAGAGGAATATTTTGAAGAGGAAGAAGAGGA 3143 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG-GTTCTAGCGCAG 2341 GA GAAGA GA GAAGA TGA GA GAA AAG TG GTT AG G AG Sbjct: 3144 GGAAGAAGAGTTTGAGGAAGAATTTGAGGAAGAAGAAGGTGAGTTAGAG-GAAG 3196 Score = 263 (39.5 bits), Expect = 0.10, P = 0.096 Identities = 93/135 (68%), Positives = 93/135 (68%), Strand = Plus / Plus Query: 2195 AGGGAGTTGTCAAGGCTGAA-A--AA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAG 2250 AGG AG G AGG TGAA A AA A GAA A GAAG AAGAGGAGGAAGA GAG Sbjct: 3095 AGGAAGAGGAAGAGGATGAAGAGGAATATTTTGAAGAGGAAG-AAGAGGAGGAAGAAGAG 3153 Query: 2251 GAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGAT 2310 GA GAAGA TGAGGA GA GA G GA AGA GA GAAGA GAAGA GA GAT Sbjct: 3154 TTTGAGGAAGAATTTGAGGAAGAAGAAGGTGAGTTAGAGGAAGAAGAAGAAGAGGAGGAT 3213 Query: 2311 GATGATGATGAATAAG 2326 GA GA GA GAA AAG Sbjct: 3214 GAGGAGGAGGAAGAAG 3229 Score = 241 (36.2 bits), Expect = 1.0, P = 0.64 Identities = 91/135 (67%), Positives = 91/135 (67%), Strand = Plus / Plus Query: 2170 AAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAA-AGCAAGAAA 2226 A AGGAA A TGA G AG AA AA GGAG A AG TGA AA A GA Sbjct: 3114 AGAGGAATATTTTGAAG-AGGAAGAAGAGGAGGAAGAAGAGTTTGAGGAAGAATTTGAGG 3172 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AAGAAG AAG GAG AGA GA GAAGA GAAGAGGA GA GAGGAGGAGGAAGA GAA Sbjct: 3173 AAGAAG-AAGGTGAGTTAGAGGAAGAAGAAGAAGAGGAGGATGAGGAGGAGGAAGAAGAA 3231 Query: 2287 GAAGATGAAGATGAAGA 2303 GA GA G GAAGA Sbjct: 3232 CTGGAAGAGGTGGAAGA 3248 >U14974 Saccharomyces cerevisiae Nmd2p (NMD2) gene, complete cds. Length = 4080 Plus Strand HSPs: Score = 319 (47.9 bits), Expect = 0.00028, P = 0.00028 Identities = 91/118 (77%), Positives = 91/118 (77%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGG 2275 AAAGCAAGA AA A GAAGA GA GA GATGAGGA GATGA GAGGATGA GA GA G Sbjct: 3117 AAAGCAAGACGAA-AGTGAAGATGAAGACGATGAGGACGATGACGAGGATGATGACGATG 3175 Query: 2276 AGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA--AT-AAGTTGGT 2331 A GA GA GA GA GATGA GATG AGAAGAAG GATGA GATGA AT AAG TG T Sbjct: 3176 ACGATGACGATGATGATGATGATGGAGAAGAAGGCGATGAGGATGATGATGAAGATGAT 3234 Score = 293 (44.0 bits), Expect = 0.0043, P = 0.0043 Identities = 83/108 (76%), Positives = 83/108 (76%), Strand = Plus / Plus Query: 2220 CAAGAAAA-AGAAGGAAGAGGAGGAAGATGAG-GAAGATGAAGAGGATGAGGAGGAGGAG 2277 CA GAAAA A AGG A AG A GA GA AG GAAGATGAAGA GATGAGGA GA GA Sbjct: 3101 CAGGAAAACATCAGGCAAAGCAAGACGAA-AGTGAAGATGAAGACGATGAGGACGATGAC 3159 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GATGA GA GATGA GATGA GA GA GATGATGATG GAA AAG Sbjct: 3160 GAGGATGATGACGATGACGATGACGATGATGATGATGATGGAGAAGAAG 3208 Score = 290 (43.5 bits), Expect = 0.0059, P = 0.0059 Identities = 106/155 (68%), Positives = 106/155 (68%), Strand = Plus / Plus Query: 2172 AGG-AAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAG 2229 AGG AAAGC GA G A AA A G AG G AGG GA A AG A GA A G Sbjct: 3113 AGGCAAAGCAAGACGAAAGTGAAGATGAAGACGATGAGGACGATGACGAGGATGATGACG 3172 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 A G A GA GA GA GATGA GA GATG AGA GA AGG G A GAGGA GATGA GAA Sbjct: 3173 ATG-ACGATGACGATGATGATGATGATGGAGAAGA--AGGCG-ATGAGGATGATGATGAA 3228 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GATGA GATGA GA GA GATGATGATGA GAA AAG Sbjct: 3229 GATGATGATGATGAGGATGATGATGATGAAGAAGAAG 3265 Score = 286 (42.9 bits), Expect = 0.0090, P = 0.0090 Identities = 78/104 (75%), Positives = 78/104 (75%), Strand = Plus / Plus Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 || | || || ||||| ||||| || || || || ||||| || || || | ||| |||| Sbjct: 3149 AGGACGATGACGAGGATGATGACGATGACGATGACGATGATGATGATGATGGAGAAGAAG 3208 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 ||||| ||||| || ||||||||||||||||| | | || | Sbjct: 3209 GCGATGAGGATGATGATGAAGATGATGATGATGAGGATGATGAT 3252 Score = 275 (41.3 bits), Expect = 0.029, P = 0.028 Identities = 91/129 (70%), Positives = 91/129 (70%), Strand = Plus / Plus Query: 2203 GTCAAGGCT-GAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA 2261 G CAA GC GA AAAG GAA A GAAG A GA GAGGA GATGA GA GATGA GA Sbjct: 3114 GGCAAAGCAAGACGAAAGT--GAAGATGAAG-ACGATGAGGACGATGACGAGGATGATGA 3170 Query: 2262 GGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GATGA GA GA GA GA GATGA GA G GAAGA G GA GA GATGATGATGA GA Sbjct: 3171 CGATGACGATGACGATGATGATGATGATGGAGAAGAAGGCGATGAGGATGATGATGAAGA 3230 Query: 2322 ATAAGTTGGT 2331 A G TG T Sbjct: 3231 TGATGATGAT 3240 Score = 272 (40.8 bits), Expect = 0.039, P = 0.039 Identities = 100/151 (66%), Positives = 100/151 (66%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCT-GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAG 2223 AGC A A GAAAG GATG AG A AGG G TG C AGG TGA A A A G Sbjct: 3119 AGCAAGACGAAAGTGAAGATGAAGACGATGAGGACGATGACGAGGATGATGACGATGACG 3178 Query: 2224 AAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 A A GA G GA GA GA G AGA GA G GATGA GA GATGA GA GA GA GA G Sbjct: 3179 ATGACGATGATGATGATGATGGAGAAGAAGGCGATGAGGATGATGATGAAGATGATGATG 3238 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGA 2312 ATGA GA GATGA GATGAAGAAGAAGA GA Sbjct: 3239 ATGAGGATGATGATGATGAAGAAGAAGAAGA 3269 >U93275 Mus musculus glucokinase gene, 5' flanking region. Length = 2623 Plus Strand HSPs: Score = 318 (47.7 bits), Expect = 0.00028, P = 0.00028 Identities = 282/475 (59%), Positives = 282/475 (59%), Strand = Plus / Plus Query: 1852 CTACATTCTGGTTTTAATAGAGTTAGGATC-TGGTAGATAATTGCACCTCAATGAGGC-A 1909 CTAC TT T T TAAT G TT ATC T TA ATAA T C CAA AGG A Sbjct: 579 CTACCTT-TA-TGATAATGGCCTTTTCATCCTCCTA-ATAAATATTGC-CAAGTAGGGTA 634 Query: 1910 TAA-CTTTGC-AAA--TATTAGACTATGCCATTT-CATGAGTTATAGATTGTTATAATGA 1964 A CT T C AAA T TTA C ATG ATT CA T TAG T T ATAATGA Sbjct: 635 GATTCTATACGAAAGCTCTTAACCCATGGTATTAGCAAATCATGTAGGTGCTAATAATGA 694 Query: 1965 -TCTTGTATTTT-TATGTTCATTTATTGAAGTTCTAGTTATTTCTGGA-GTTGCTGTGGA 2021 T TG AT T GT CA AT AA T A T T G GTTGCT TG A Sbjct: 695 ATACTGGATGCAGTCAGTACAGGGATATAAAATGGAATG-TAAGAGCCTGTTGCTATGAA 753 Query: 2022 TCTACAGATACGTGATATTTTGGTATAACTAGAATCTTGATTTCTTTCATAAAGTTCTGC 2081 T AG TA T A AT TTG TA AA A AAT TTGA C TT AT A GT TG Sbjct: 754 TGGTTAGCTAACT-AGATGTTG-TACAAG-A-AATGTTGA---CGTT-ATGACGTG-TGG 804 Query: 2082 CATGTTC-TATTTCTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGC 2140 A TT TATT T A CT TT A T TTT AT C T Sbjct: 805 AAACTTGGTATTGAAGATGTGGA-CTCGAAACTTTGTGGATTTTTTGATGCCATGATAAA 863 Query: 2141 TTTG-GAAGGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAA--AAG 2196 TG GAAG ATA TG T C TA C A AAG A AAG GA G AG A A AAG Sbjct: 864 AATGTGAAGAATACTGTTCCTTACCAAAAAGAAGAAGAAGAAGGA-GAAGGAGGAGGAAG 922 Query: 2197 -GGAGTTGTCAAGGCTGAAAAAAGCAAGAAA-AAGAAG-GAAG-AGGAGGAAGATGAGGA 2252 GGAG G AGG GAA A G AG AA AAGAAG GAAG AGGAGGAAGA GAGGA Sbjct: 923 AGGAGGAGG--AGGAAGAAGAGGGGGAGGAAGAAGAAGAGAAGGAGGAGGAAGAGGAGGA 980 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG-ATGAAGATGAAGAAGAAGATG 2311 GA GAAGA GA GAGGAGGAGGA GAAGA GA GAAG A GA GA A GA GA GA G Sbjct: 981 GGAGGAAGAAGAGGAGGAGGAGGAAGAAGAAGA-GAAGGAGGAGGACTAGGAGGAGGAGG 1039 Query: 2312 ATGATGATGAATAAG 2326 A GA GA G A AAG Sbjct: 1040 A-GAAGAAGGAGAAG 1053 Score = 305 (45.8 bits), Expect = 0.0011, P = 0.0011 Identities = 101/140 (72%), Positives = 101/140 (72%), Strand = Plus / Plus Query: 2187 AGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAG 2245 AG A AA A G AG G AAGG GA AA AG A GA A GAAG AAGAGG GGA G Sbjct: 893 AGAAGAAGAAGAAGGAG--AAGGAGGAGGAAGAGGAGGAGGAGGAAG-AAGAGGGGGAGG 949 Query: 2246 ATGAGGAAGATGAAG-AGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAA 2304 A GA GAAGA GAAG AGGA GA GAGGAGGAGGA GA GAAGA GA GA GA GAAGAA Sbjct: 950 AAGAAGAAGA-GAAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAAGAA 1008 Query: 2305 GAAGATGATGATGATGAATAAG 2326 GAAGA A GA GA GA TA G Sbjct: 1009 GAAGAGAAGGAGGAGGACTAGG 1030 Score = 299 (44.9 bits), Expect = 0.0021, P = 0.0021 Identities = 87/110 (79%), Positives = 87/110 (79%), Strand = Plus / Plus Query: 2214 AAAAAGCAAGAAAAAGAAGGA-A-G-AGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 AAAAAG AAGAA AAGAAGGA A G AGGAGGAAGA GAGGA GA GAAGA GA G GGA Sbjct: 889 AAAAAG-AAGAAGAAGAAGGAGAAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAGGGGGA 947 Query: 2271 GGAGGAGGAAGATGAAGAAG-ATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GGA GA GAAGA GAAG AG A GAAGA GA GA GA GA GA GA GA GA Sbjct: 948 GGAAGAAGAAGA-GAAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAGGAGGA 998 Score = 244 (36.6 bits), Expect = 0.70, P = 0.50 Identities = 94/138 (68%), Positives = 94/138 (68%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAG 2229 AAG A AG GA G AG A AA AG AG G AGG GA A AG A GAA AAG Sbjct: 935 AAGAAGAGGGGGAGGAAGAAGAAGAGA-AGGAGG--AGGAAGAGGAGGAGGAGGAAGAAG 991 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 A GGA GAGGAGGAAGA GA GA A GA GAGGA AGGAGGAGGAGGA GA GAAG A Sbjct: 992 A-GGAGGAGGAGGAAGAAGAAGAGAAGGAGGAGGACTAGGAGGAGGAGGA-GAAGAAGGA 1049 Query: 2290 GATGAAGATGAAGA-AGAAG 2308 GA G GA G AGA AG AG Sbjct: 1050 GAAGGGGAAGGAGAGAGTAG 1069 >U28158 Saccharomyces cerevisiae Ifs1p (IFS1) gene, complete cds. Length = 4883 Plus Strand HSPs: Score = 319 (47.9 bits), Expect = 0.00029, P = 0.00029 Identities = 91/118 (77%), Positives = 91/118 (77%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGG 2275 AAAGCAAGA AA A GAAGA GA GA GATGAGGA GATGA GAGGATGA GA GA G Sbjct: 2659 AAAGCAAGACGAA-AGTGAAGATGAAGACGATGAGGACGATGACGAGGATGATGACGATG 2717 Query: 2276 AGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA--AT-AAGTTGGT 2331 A GA GA GA GA GATGA GATG AGAAGAAG GATGA GATGA AT AAG TG T Sbjct: 2718 ACGATGACGATGATGATGATGATGGAGAAGAAGGCGATGAGGATGATGATGAAGATGAT 2776 Score = 293 (44.0 bits), Expect = 0.0044, P = 0.0044 Identities = 83/108 (76%), Positives = 83/108 (76%), Strand = Plus / Plus Query: 2220 CAAGAAAA-AGAAGGAAGAGGAGGAAGATGAG-GAAGATGAAGAGGATGAGGAGGAGGAG 2277 CA GAAAA A AGG A AG A GA GA AG GAAGATGAAGA GATGAGGA GA GA Sbjct: 2643 CAGGAAAACATCAGGCAAAGCAAGACGAA-AGTGAAGATGAAGACGATGAGGACGATGAC 2701 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GATGA GA GATGA GATGA GA GA GATGATGATG GAA AAG Sbjct: 2702 GAGGATGATGACGATGACGATGACGATGATGATGATGATGGAGAAGAAG 2750 Score = 290 (43.5 bits), Expect = 0.0060, P = 0.0060 Identities = 106/155 (68%), Positives = 106/155 (68%), Strand = Plus / Plus Query: 2172 AGG-AAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAG 2229 AGG AAAGC GA G A AA A G AG G AGG GA A AG A GA A G Sbjct: 2655 AGGCAAAGCAAGACGAAAGTGAAGATGAAGACGATGAGGACGATGACGAGGATGATGACG 2714 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 A G A GA GA GA GATGA GA GATG AGA GA AGG G A GAGGA GATGA GAA Sbjct: 2715 ATG-ACGATGACGATGATGATGATGATGGAGAAGA--AGGCG-ATGAGGATGATGATGAA 2770 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GATGA GATGA GA GA GATGATGATGA GAA AAG Sbjct: 2771 GATGATGATGATGAGGATGATGATGATGAAGAAGAAG 2807 Score = 286 (42.9 bits), Expect = 0.0092, P = 0.0092 Identities = 78/104 (75%), Positives = 78/104 (75%), Strand = Plus / Plus Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 || | || || ||||| ||||| || || || || ||||| || || || | ||| |||| Sbjct: 2691 AGGACGATGACGAGGATGATGACGATGACGATGACGATGATGATGATGATGGAGAAGAAG 2750 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 ||||| ||||| || ||||||||||||||||| | | || | Sbjct: 2751 GCGATGAGGATGATGATGAAGATGATGATGATGAGGATGATGAT 2794 Score = 275 (41.3 bits), Expect = 0.029, P = 0.029 Identities = 91/129 (70%), Positives = 91/129 (70%), Strand = Plus / Plus Query: 2203 GTCAAGGCT-GAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA 2261 G CAA GC GA AAAG GAA A GAAG A GA GAGGA GATGA GA GATGA GA Sbjct: 2656 GGCAAAGCAAGACGAAAGT--GAAGATGAAG-ACGATGAGGACGATGACGAGGATGATGA 2712 Query: 2262 GGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GATGA GA GA GA GA GATGA GA G GAAGA G GA GA GATGATGATGA GA Sbjct: 2713 CGATGACGATGACGATGATGATGATGATGGAGAAGAAGGCGATGAGGATGATGATGAAGA 2772 Query: 2322 ATAAGTTGGT 2331 A G TG T Sbjct: 2773 TGATGATGAT 2782 Score = 272 (40.8 bits), Expect = 0.040, P = 0.039 Identities = 100/151 (66%), Positives = 100/151 (66%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCT-GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAG 2223 AGC A A GAAAG GATG AG A AGG G TG C AGG TGA A A A G Sbjct: 2661 AGCAAGACGAAAGTGAAGATGAAGACGATGAGGACGATGACGAGGATGATGACGATGACG 2720 Query: 2224 AAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 A A GA G GA GA GA G AGA GA G GATGA GA GATGA GA GA GA GA G Sbjct: 2721 ATGACGATGATGATGATGATGGAGAAGAAGGCGATGAGGATGATGATGAAGATGATGATG 2780 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGA 2312 ATGA GA GATGA GATGAAGAAGAAGA GA Sbjct: 2781 ATGAGGATGATGATGATGAAGAAGAAGAAGA 2811 >U12137 Saccharomyces cerevisiae Upf2p (UPF2) gene, complete cds. Length = 5015 Plus Strand HSPs: Score = 319 (47.9 bits), Expect = 0.00029, P = 0.00029 Identities = 91/118 (77%), Positives = 91/118 (77%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGG 2275 AAAGCAAGA AA A GAAGA GA GA GATGAGGA GATGA GAGGATGA GA GA G Sbjct: 3936 AAAGCAAGACGAA-AGTGAAGATGAAGACGATGAGGACGATGACGAGGATGATGACGATG 3994 Query: 2276 AGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA--AT-AAGTTGGT 2331 A GA GA GA GA GATGA GATG AGAAGAAG GATGA GATGA AT AAG TG T Sbjct: 3995 ACGATGACGATGATGATGATGATGGAGAAGAAGGCGATGAGGATGATGATGAAGATGAT 4053 Score = 293 (44.0 bits), Expect = 0.0044, P = 0.0044 Identities = 83/108 (76%), Positives = 83/108 (76%), Strand = Plus / Plus Query: 2220 CAAGAAAA-AGAAGGAAGAGGAGGAAGATGAG-GAAGATGAAGAGGATGAGGAGGAGGAG 2277 CA GAAAA A AGG A AG A GA GA AG GAAGATGAAGA GATGAGGA GA GA Sbjct: 3920 CAGGAAAACATCAGGCAAAGCAAGACGAA-AGTGAAGATGAAGACGATGAGGACGATGAC 3978 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GATGA GA GATGA GATGA GA GA GATGATGATG GAA AAG Sbjct: 3979 GAGGATGATGACGATGACGATGACGATGATGATGATGATGGAGAAGAAG 4027 Score = 290 (43.5 bits), Expect = 0.0061, P = 0.0060 Identities = 106/155 (68%), Positives = 106/155 (68%), Strand = Plus / Plus Query: 2172 AGG-AAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAG 2229 AGG AAAGC GA G A AA A G AG G AGG GA A AG A GA A G Sbjct: 3932 AGGCAAAGCAAGACGAAAGTGAAGATGAAGACGATGAGGACGATGACGAGGATGATGACG 3991 Query: 2230 AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAA 2289 A G A GA GA GA GATGA GA GATG AGA GA AGG G A GAGGA GATGA GAA Sbjct: 3992 ATG-ACGATGACGATGATGATGATGATGGAGAAGA--AGGCG-ATGAGGATGATGATGAA 4047 Query: 2290 GATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GATGA GATGA GA GA GATGATGATGA GAA AAG Sbjct: 4048 GATGATGATGATGAGGATGATGATGATGAAGAAGAAG 4084 Score = 286 (42.9 bits), Expect = 0.0092, P = 0.0092 Identities = 78/104 (75%), Positives = 78/104 (75%), Strand = Plus / Plus Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 || | || || ||||| ||||| || || || || ||||| || || || | ||| |||| Sbjct: 3968 AGGACGATGACGAGGATGATGACGATGACGATGACGATGATGATGATGATGGAGAAGAAG 4027 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 ||||| ||||| || ||||||||||||||||| | | || | Sbjct: 4028 GCGATGAGGATGATGATGAAGATGATGATGATGAGGATGATGAT 4071 Score = 275 (41.3 bits), Expect = 0.029, P = 0.029 Identities = 91/129 (70%), Positives = 91/129 (70%), Strand = Plus / Plus Query: 2203 GTCAAGGCT-GAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA 2261 G CAA GC GA AAAG GAA A GAAG A GA GAGGA GATGA GA GATGA GA Sbjct: 3933 GGCAAAGCAAGACGAAAGT--GAAGATGAAG-ACGATGAGGACGATGACGAGGATGATGA 3989 Query: 2262 GGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GATGA GA GA GA GA GATGA GA G GAAGA G GA GA GATGATGATGA GA Sbjct: 3990 CGATGACGATGACGATGATGATGATGATGGAGAAGAAGGCGATGAGGATGATGATGAAGA 4049 Query: 2322 ATAAGTTGGT 2331 A G TG T Sbjct: 4050 TGATGATGAT 4059 Score = 272 (40.8 bits), Expect = 0.040, P = 0.039 Identities = 100/151 (66%), Positives = 100/151 (66%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCT-GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAG 2223 AGC A A GAAAG GATG AG A AGG G TG C AGG TGA A A A G Sbjct: 3938 AGCAAGACGAAAGTGAAGATGAAGACGATGAGGACGATGACGAGGATGATGACGATGACG 3997 Query: 2224 AAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 A A GA G GA GA GA G AGA GA G GATGA GA GATGA GA GA GA GA G Sbjct: 3998 ATGACGATGATGATGATGATGGAGAAGAAGGCGATGAGGATGATGATGAAGATGATGATG 4057 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGA 2312 ATGA GA GATGA GATGAAGAAGAAGA GA Sbjct: 4058 ATGAGGATGATGATGATGAAGAAGAAGAAGA 4088 >U76750 Lytechinus pictus mitotic apparatus protein p62 mRNA, complete cds. Length = 3374 Plus Strand HSPs: Score = 318 (47.7 bits), Expect = 0.00030, P = 0.00030 Identities = 144/213 (67%), Positives = 144/213 (67%), Strand = Plus / Plus Query: 2114 TTCCCTACTGTTTTATCCTCCCTTTG-CTTTGGA-AGGATATTGCTGCATATCGAGCT-A 2170 TTCC T G T TC T CC TTG C TG AGGAT TG G A AT AG T A Sbjct: 884 TTCCGTCGAGAATGGTCATGCCATTGACGATGACGAGGATGATGAAGAAGATGAAGATTA 943 Query: 2171 -AAGGAAAGCC-TGATGCAGCAAAAA-AGGGAGTTGTCAAG-GCTGAA-AA-AAGCAAGA 2224 AAGG G TGA G AG A A AGG AG T C AG G GAA AA AAG AAGA Sbjct: 944 CAAGGTCGGAGATGAGG-AGGAGGAGGAGGAAGCTA-CTAGTGGGGAAGAAGAAG-AAGA 1000 Query: 2225 AAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG--AGGAGGAGGAAGA 2282 A A GAAG AAGA GAGGA GA GA GA GATGAAGAG ATG AGGAG A GA GA Sbjct: 1001 AGATGAAG-AAGAAGAGGAGGAAGAAGATGATGAAGAG-ATGGCTTTAGGAG-ATGATGA 1057 Query: 2283 TGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 TGA GAAGATGA GATGA GAAGA GATGA GATGA GA Sbjct: 1058 TGACGAAGATGATGATGAGGAAGACGATGAGGATGAGGA 1096 Score = 298 (44.7 bits), Expect = 0.0025, P = 0.0025 Identities = 100/137 (72%), Positives = 100/137 (72%), Strand = Plus / Plus Query: 2200 GTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAA 2259 G TG C AGG TGA AA G AAGA AAGA A AGG G AGATGAGGA GA GA Sbjct: 912 GATGACGAGGATGATGAA-G-AAGATGAAGATTACA-AGGTCGGAGATGAGGAGGAGGAG 968 Query: 2260 GAGGATG--AGGAG-GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGAT 2316 GAGGA G A AG G GGA GAAGA GAAGAAGATGAAGA GAAGA GA GA GA GAT Sbjct: 969 GAGGAAGCTACTAGTGGGGAAGAAGAAGAAGAAGATGAAGAAGAAGAGGAGGAAGAAGAT 1028 Query: 2317 GATGAATAAGTTGGTTCTAG 2336 GATGAA A G TGG T TAG Sbjct: 1029 GATGAAGA-GATGGCTTTAG 1047 Score = 274 (41.1 bits), Expect = 0.031, P = 0.031 Identities = 104/153 (67%), Positives = 104/153 (67%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTTGTCAAGG-CTGAAAAAAGCAAGAAAAAGAAGGAAG--AG 2238 GATG G A AA A G AG T CAAGG C GA A AG A GA A GA GGAAG A Sbjct: 921 GATGATGAAGAAGATGAAGATTACAAGGTCGGAGATGAGGAGGAGGAGGA-GGAAGCTAC 979 Query: 2239 GAG-GAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGA 2297 AG G GA GA GAAGA GAAGA GA GA GA GAGGAGGAAGA GA GA GA GA GA Sbjct: 980 TAGTGGGGAAGAAGAAGAAGAAGATGAAGAAGAAGAGGAGGAAGAAGATGATGAAGA-GA 1038 Query: 2298 TGAAGA-AGAAGATGATGATGATGAATAAGTTGGT 2331 TG AG AGATGATGATGA GAA A G TG T Sbjct: 1039 TGGCTTTAGGAGATGATGATGACGAAGATGATGAT 1073 Score = 272 (40.8 bits), Expect = 0.038, P = 0.038 Identities = 118/181 (65%), Positives = 118/181 (65%), Strand = Plus / Plus Query: 2152 ATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCT 2211 ATTG G AT CGAG A GAA G GATG AG A AAGG G G AGG Sbjct: 906 ATTGACG-ATGACGAGGATGATGAA-GAA-GATGAAGATTACAAGGTCGGAGATGAGGAG 962 Query: 2212 GAAAAA-AGCAAGAAAA-AGAAGG-AAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAG 2268 GA A AG AAG A AG GG AAGA GA GAAGA GA GAAGA GAAGAGGA GA Sbjct: 963 GAGGAGGAGGAAGCTACTAGTGGGGAAGAAGAAGAAGAAGATGAAGAAGAAGAGGAGGAA 1022 Query: 2269 GAGGAGGAGGAAGA--TGAAGA-AGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325 GA GA GA GAAGA TG AG GA GATGA GA GAAGATGATGATGA GAA A Sbjct: 1023 GAAGATGATGAAGAGATGGCTTTAGGAGATGATGATGACGAAGATGATGATGAGGAAGAC 1082 Query: 2326 GTTG 2329 G TG Sbjct: 1083 GATG 1086 Score = 257 (38.6 bits), Expect = 0.19, P = 0.17 Identities = 111/169 (65%), Positives = 111/169 (65%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTA-AAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTT 2202 G AGGA GCT C TA G G A AAG A AAG GATG AG A AA AGG G Sbjct: 965 GGAGGAGGAAGCTAC-TAGTGGGGAAGAAGAAGAAGAA-GATGAAGAAGAAGAGGAGGAA 1022 Query: 2203 GTCAAGGCTGAAAAAA-GCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGA 2261 G A G TGAA A A G A AGA G A GA GA GAAGATGA GA GA GAAGA Sbjct: 1023 GAAGATGATGAAGAGATGGCTTTAGGAGATG-ATGATGACGAAGATGATGATGAGGAAGA 1081 Query: 2262 GGATGAGGAGGAGGAGGA-A-G-ATGAAGAAGATGAAGATGAAGAAGAAGAT 2310 GATGAGGA GAGGAGG A G ATGA GA GATGA GA GAAGA GA GAT Sbjct: 1082 CGATGAGGATGAGGAGGGCATGGATGACGAGGATGAGGAAGAAGAGGAGGAT 1133 Score = 223 (33.5 bits), Expect = 6.7, P = 1.0 Identities = 59/73 (80%), Positives = 59/73 (80%), Strand = Plus / Plus Query: 2219 GCAAGAAAA-AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAG 2277 GCA GAAA A AAGGA GA GA AGATGAGGA GA GA GA GATGAGGAGGAGGAG Sbjct: 700 GCATGAAAGGAAAAGGA-GATGAACTAGATGAGGATGAAGATGACGATGAGGAGGAGGAG 758 Query: 2278 GAAGATGAAGAAGA 2291 GA GA GAAGAAGA Sbjct: 759 GAGGAGGAAGAAGA 772 >A12522 Ag169 clone Length = 843 Plus Strand HSPs: Score = 217 (32.6 bits), Expect = 7.8, P = 1.0 Identities = 291/491 (59%), Positives = 291/491 (59%), Strand = Plus / Plus Query: 1654 TACTTAATTTTCAGCTT-TAGT-CAT-TCT-GAAAAGTGTT-TATTTCTAGATGTTTCTT 1708 TACTT T TTCA CTT T GT C T T T GA T TT TA TCT A G TTCTT Sbjct: 61 TACTTCTTCTTCATCTTCTTGTACCTCTTTAGATTCTTCTTGTACCTCTTTA-GATTCTT 119 Query: 1709 AACCTAATTG-CATGTTTATTGACAAATTACCTTTTTTTTTTAAGACCACATTTC-CTA- 1765 C T TTG C T TT TT CAA T T T TTTTT AAG CA TT C CTA Sbjct: 120 --CTTTTTTGTCTTCTTCCTTATCAACATGTTTCTGTTTTTGAAGTTCAGCTTCCTCTAT 177 Query: 1766 CTAAGG-ATTAAGGTCTGACAGTGTAAACCTGTAGAGTGCTTTTTTG-CAT-TCAGAAGG 1822 CT G ATT TCT A T TA CT G GT CT TT CA TC A GG Sbjct: 178 CTTCGCCATTTTTTTCTTATGAT-TATCTCTTCTGGGTACTACATTAACACGTCCTATGG 236 Query: 1823 TGGC-AGTGTCTACCCTTTAATC-A-AAGTCTCTACATTCTGGTTTTAATAGAGTTAGGA 1879 T C A T T C CTT AT A AAGT T T TTC TTTT AT A T A Sbjct: 237 TACCTATTAATTGCTCTTGTATGGATAAGTTTTTTTCTTCAACTTTTGATTTA--TCC-A 293 Query: 1880 TCTGGTAGATAATTGCACCTCAATGAGGCATAACTTTGCAAA-TATTAGACT-A-TGC-C 1935 T T T G TAATTG C T T A AT A TTT CA T T G CT A TG C Sbjct: 294 T-TAAT-GTTAATTGTTC-TGGTTCATCTATTAGTTTACATTGTGGTTGGCTTAGTGGTC 350 Query: 1936 -A-TTTCATGAGTTATAGATTGTTATAATGATCTTGTATTTTTATGTTC--A-TTTATTG 1990 A TTTC GTTAT TTGTT T T A C TG T TTTAT TTC A TTTATT Sbjct: 351 TACTTTCTACTGTTATGTGTTGTTCT--TCA-CATGCCTCTTTATCTTCTAAGTTTATT- 406 Query: 1991 AAGTTCTAGTT-ATTTCTGGAGTTGCTGTGGATCTACAGATACGTGA-TATTT-TGGTAT 2047 A TTCTA AT T TG TT T T T TA A AT T A TA T T T T Sbjct: 407 -ATTTCTACACCATCTTTGTC-TTCATCTTC-TATA-ACATTTTTAACTACGTGTTTTTT 462 Query: 2048 AACTAGAATCTTGATTT-CTTTCATAAAGTTCTGCCATGTTCTATTTCTTTCCTTAATCT 2106 ACT TCTT TTT CTTT TA GTT T CC T TT T TTTCTTTCCTT ATCT Sbjct: 463 TACTTTT-TCTTTTTTTGCTTTTTTAT-GTTTT-CC-T-TTATCTTTCTTTCCTTTATCT 517 Query: 2107 TTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTG 2144 TT TTTC T T TG TTT T TC TTTG TTTG Sbjct: 518 TTCTTTCCTT--T--TGATTTGTGTTCT-TTTGATTTG 550 Minus Strand HSPs: Score = 310 (46.5 bits), Expect = 0.00030, P = 0.00030 Identities = 118/169 (69%), Positives = 118/169 (69%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TC TC TCTTCTTCTTC TCTTCATCTTCTTC CTTC TC TC TC T Sbjct: 18 CTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCATCTTCTTCTACTTCTTCTTCATCTT 77 Query: 2266 CAT---CCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTT-TTTCTTGCTTTTTTCA 2211 C T CCTCTT A TTC TC T T CCTC T T TTCTT TTT TTG TT TTC Sbjct: 78 CTTGTACCTCTTTAGATTCTTCTTGTACCTCTT-TAGATTCTTCTTTTTTGTCTTCTTCC 136 Query: 2210 GCCTTGACAACTCCCT-TTTTTGCTGCATCAGGCTTTCCTTTAGCT-CGATAT 2160 T ACA T CT TTTTTG G TCAG CTT CCT TA CT CG AT Sbjct: 137 TTATCAACATGTTTCTGTTTTTGAAGT-TCAG-CTT-CCTCTATCTTCGCCAT 186 Score = 279 (41.9 bits), Expect = 0.0091, P = 0.0091 Identities = 103/155 (66%), Positives = 103/155 (66%), Strand = Minus / Plus Query: 2322 TTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATC 2263 TTC TC TC TC TCTTCTTCTTC TC TC TCTTCTTC TCTTC TC TC TC TC TC Sbjct: 1 TTCCTCTTCTTCCTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCATCTTCTTC 60 Query: 2262 CTCTTCATCTTCCTCATCTTCCTCCTCTTCC--TTCTTTTTCTTGCTTTTTTCAGCCTTG 2205 CTTC TCTTC TC TCTT CCTCTT TTCTT TT T CT TTT A CTT Sbjct: 61 TACTTCTTCTTCATCTTCTTGTACCTCTTTAGATTCTTCTTGTACCTCTTTAGATTCTTC 120 Query: 2204 ACAACTCCCTTTTTTGCTG-CATCAGGCTTTCCTTT 2170 T CTT TT T CA CA G TTTC TT Sbjct: 121 TTTTTTGTCTTCTTCCTTATCAACATG-TTTCTGTT 155 Score = 263 (39.5 bits), Expect = 0.052, P = 0.051 Identities = 119/182 (65%), Positives = 119/182 (65%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 C T TTC TC TC TC TCTTCTTCTTC TCTTC TCTTC TC TCTTC C TC TC T Sbjct: 12 CCTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCATCTTCTTCTACTTCTTCTT 71 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTT---TTCTTGCTTTTT-TCA 2211 CATC TCTT C TC T A TTC TC T T CCT CTTT TTCTT TTTTT TC Sbjct: 72 CATCTTCTTGTACCTCTTTAGATTCTTCTTGTACCT-CTTTAGATTCTTCTTTTTTGTCT 130 Query: 2210 GCCTTGACAACTCC-CTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAAT 2152 C TT A TC C T TTT CTG T G TTC T CTC AT T C GC AT Sbjct: 131 TC-TTCCTTA-TCAACATGTTT-CTGTTTTTGAAGTTCAGCTTCCTCTATCTTC-GCCAT 186 Query: 2151 ATCCTTC 2145 T TTC Sbjct: 187 TTTTTTC 193 >U37541 Drosophila melanogaster complete mitochondrial genome. Length = 19,517 Plus Strand HSPs: Score = 281 (42.2 bits), Expect = 0.00031, Sum P(2) = 0.00031 Identities = 313/555 (56%), Positives = 313/555 (56%), Strand = Plus / Plus Query: 1456 TACAAA-AACAGGCTAGACAAAGTAATATAGGCTATATTTTTC--TTAGTCATATCCTGA 1512 TA AAA AA A TA AA TAAT TA TATATTT T TT T ATAT T Sbjct: 17878 TATAAATAATATAATAATTTAATTAAT-TATTATATATTTATAAATTTAT-ATATTATTG 17935 Query: 1513 AACATTTATGTTCTTTTCCTTTAGATACTCAAAAAACCACAGCATC-AC-TAAGTTAAAT 1570 AA ATTTAT T T T T TA ATA T AAAAA A A AT A TAA TTAA Sbjct: 17936 AATATTTATATAATATATATATATATA-TAGAAAAATTAAATTATTTAAATAATTTAATA 17994 Query: 1571 TACAAGTCTGCTGCTCTGTCCAGTAAAT-TAATAAGATTA-AGGAAATCTATAACTCTTA 1628 TA AA T T T TC TAAAT TA TA TTA A AAAT T TA T TA Sbjct: 17995 TA-AATTTTTTAAAAATTTCT--TAAATGTATTATTTTTATAAAAAATATTTATATAATA 18051 Query: 1629 TAGTTCA-GTAAATTGAAATATTAAATACTTAATTTTCAGCTTTAGTCATTCTGAAAAGT 1687 A T CA GT TT AAA AT AAA A AATTTT A T A ATT T AA G Sbjct: 18052 AAAT-CATGTTTTTTAAAAAAT-AAACAAAAAATTTTTAA-TAAATAAATTTTATAATGA 18108 Query: 1688 GTT-TATTTCTAGATGTTTCTTAACCTAATTGCATG-TTTATTGACAAAT-TACCTTTTT 1744 T TA TT TA T TTT T AA T TT A TTT TT A AAA TA TTTTT Sbjct: 18109 AATATAATT-TATTTATTTTTCAATTTTTTTAAAAAATTTTTTAAAAAAAATAA-TTTTT 18166 Query: 1745 TTTTTAAGACCACATTTCCTACTAAGGATTAAGGTCT-GACAGTGTAAACCTGTAGAGTG 1803 TTTTTAA A A A T TACTAA AT AA T GA A T TA A T TA A Sbjct: 18167 TTTTTAAAAAAAAACTATATACTAATTATAAATTAATAGATATT-TATATATATATAAAT 18225 Query: 1804 CTTTTTTGCATTCAGAAGGTGGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCTGGT 1863 TTT T ATT A A T C T TA TT AAT AAA T TA A T T Sbjct: 18226 ATTTAATATATT-ATTATATATC--TAA-TAAT-TTAAATAAAAAATTTTAAAATTTAAA 18280 Query: 1864 TTTAATAGAGTTAGGATCTGGTAGATAAT-TGCACCTCAATGAGGCATAACTTTGCAAAT 1922 T TAGA TA T T A T AT T C C T A T A AT A T AAT Sbjct: 18281 AATG-TAGATATAATTTATAAAAATTTATATTCTCAT-ATTTATTTATTATTAATTTAAT 18338 Query: 1923 ATTAGACTATGCCATTTCATGAGTTA-TAGATTGTTATA-ATG-ATCT-TGTATTT-TTA 1977 TTA A TA AT T ATGA TTA T ATT TTATA AT AT T TAT T TTA Sbjct: 18339 -TTATA-TAAATAATATAATGATTTAATTAATTATTATATATTTATAAATTTATATATTA 18396 Query: 1978 T-GTTCATTTATTGAAGTTCTAGTTATTTCTGGA 2010 T G ATTTAT AA T TA TAT T T GA Sbjct: 18397 TTGAATATTTATATAATATATATATATATATAGA 18430 Score = 277 (41.6 bits), Expect = 0.00046, Sum P(2) = 0.00046 Identities = 303/536 (56%), Positives = 303/536 (56%), Strand = Plus / Plus Query: 1475 AAGTAATATAGGCTATATTTTTC--TTAGTCATATCCTGAAACATTTATGTTCTTTTCCT 1532 AA TAAT TA TATATTT T TT T ATAT T AA ATTTAT T T T T Sbjct: 18362 AATTAAT-TATTATATATTTATAAATTTAT-ATATTATTGAATATTTATATAATATATAT 18419 Query: 1533 TTAGATACTCAAAAAACCACAGCATC-AC-TAAGTTAAATTACAAGTCTGCTGCTCTGTC 1590 TA ATA T AAAAA A A AT A TAA TTAA TA AA T T T TC Sbjct: 18420 ATATATA-TAGAAAAATTAAATTATTTAAATAATTTAATATA-AATTTTTTAAAAATTTC 18477 Query: 1591 CAGTAAAT-TAATAAGATTA-AGGAAATCTATAACTCTTATAGTTCA-GTAAATTGAAAT 1647 TAAAT TA TA TTA A AAAT T TA T TA A T CA GT TT AAA Sbjct: 18478 T--TAAATGTATTATTTTTATAAAAAATATTTATATAATAAAAT-CATGTTTTTTAAAAA 18534 Query: 1648 ATTAAATACTTAATTTTCAGCTTTAGTCATTCTGAAAAGTGTT-TATTTCTAGATGTTTC 1706 AT AAA A AATTTT A T A ATT T AA G T TA TT TA T TTT Sbjct: 18535 AT-AAACAAAAAATTTTTAA-TAAATAAATTTTATAATGAAATATAATT-TATTTATTTT 18591 Query: 1707 TTAACCTAATTGCATG-TTTATTGACAAAT-TACCTTTTTTTTTTAAGACCACATTTCCT 1764 T AA T TT A TTT TT A AAA TA TTTTTTTTTTAA A A A T T Sbjct: 18592 TCAATTTTTTTAAAAAATTTTTTAAAAAAAATAA-TTTTTTTTTTAAAAAAAAACTATAT 18650 Query: 1765 ACTAAGGATTAAGGTCT-GACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGT 1823 ACTAA AT AA T GA A T TA A T TA A TTT T ATT A A T Sbjct: 18651 ACTAATTATAAATTAATAGATATT-TATATATATATAAATATTTAATATATT-ATTATAT 18708 Query: 1824 GGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAATAGAGTTAGGATCTG 1883 C T TA TT AAT AAA T TA A T T T TAGA TA T T Sbjct: 18709 ATC--TAA-TAAT-TTAAATAAAAAATTTTAAAATTTAAAAATG-TAGATATAATTTATA 18763 Query: 1884 GTAGATAAT-TGCACCTCAATGAGGCATAACTTTGCAAATATTAGACTATGCCATTTCAT 1942 A T AT T C C T A T A AT A T AAT TTA A TA AT T AT Sbjct: 18764 AAAATTTATATTCTCAT-ATTTATTTATTATTAATTTAAT-TTATA-TAAATAATATAAT 18820 Query: 1943 GAGTTA-TAGATTGTTATA-ATG-ATCT-TGTATTT-TTAT-GTTCATTTATTGAAGTTC 1996 GA TTA T ATT TTATA AT AT T TAT T TTAT G ATTTAT AA T Sbjct: 18821 GATTTAATTAATTATTATATATTTATAAATTTATATATTATTGAATATTTATATAATATA 18880 Query: 1997 TAGTTATTTCTGGA 2010 TA TAT T T GA Sbjct: 18881 TATATATATATAGA 18894 Score = 266 (39.9 bits), Expect = 0.0014, Sum P(2) = 0.0014 Identities = 300/536 (55%), Positives = 300/536 (55%), Strand = Plus / Plus Query: 1475 AAGTAATATAGGCTATATTTTTC--TTAGTCATATCCTGAAACATTTATGTTCTTTTCCT 1532 AA TAAT TA TATATTT T TT T ATAT T AA ATTTAT T T T T Sbjct: 18826 AATTAAT-TATTATATATTTATAAATTTAT-ATATTATTGAATATTTATATAATATATAT 18883 Query: 1533 TTAGATACTCAAAAAACCACAGCATC-AC-TAAGTTAAATTACAAGTCTGCTGCTCTGTC 1590 TA ATA T AAAAA A A AT A TAA TTAA TA AA T T T TC Sbjct: 18884 ATATATA-TAGAAAAATTAAATTATTTAAATAATTTAATATA-AATTTTTTAAAAATTTC 18941 Query: 1591 CAGTAAAT-TAATAAGATTA-AGGAAATCTATAACTCTTATAGTTCAGTAAATTGAAATA 1648 TAAAT TA TA TTA A AAAT T TA T TA A T CA T TT AA A Sbjct: 18942 T--TAAATGTATTATTTTTATAAAAAATATTTATATAATAAAAT-CATTTTTTTTTAAAA 18998 Query: 1649 TTAAATACTTAATTTTCAGCTTTAGTCATTCTGAAAAGTGTT-TA-TTTCTAGATGTTTC 1706 TAAA A AATTTT A T A ATT T AA G T TA TTT T AT TTTC Sbjct: 18999 ATAAACAAAAAATTTTTAA-TAAATAAATTTTATAATGAAATATAATTTATTTATTTTTC 19057 Query: 1707 -TTAACCTAATTGCATGTTTATTGACAAATTACCTTTTTTTTTTAAGACCACATTTCCTA 1765 TT TAA A TTT TT A AAA A TTTTTTTTT AA A A T T TA Sbjct: 19058 ATTTTTTTAAAAAAAATTTT-TTAAAAAAAAATATTTTTTTTTAAAAAAAAACTATA-TA 19115 Query: 1766 CTAAGGATTAAGGTCT-GACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGTG 1824 CTAA AT AA T GA A T TA A T TA A TTT T ATT A A T Sbjct: 19116 CTAATTATAAATTAATAGATATT-TATATATATATAAATATTTAATATATT-ATTATATA 19173 Query: 1825 GCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAATAGAGTTAGGATCTGG 1884 C T TA TT AAT AAA T TA A T T TA TAGA TA T T Sbjct: 19174 TC--TAA-TAAT-TTAAATAAAAAATTTTAAAATTTAAAAATA-TAGATATAATTTATAA 19228 Query: 1885 TAGATAAT-TGCACCTCAATGAGGCATAACTTTGCAAATATTAGACTATGCCATTTCATG 1943 A T AT T C C T A T A AT A T AAT TTA A TA AT T ATG Sbjct: 19229 AAATTTATATTCTCAT-ATTTATTTATTATTAATTTAAT-TTATA-TAAATAATATAATG 19285 Query: 1944 AGTTA-TAGATTGTTATA-ATG-ATCT-TGTATTT-TTAT-GTTCATTTATTGAAGTTCT 1997 A TTA T ATT TTATA AT AT T TAT T TTAT G ATTTAT A T T Sbjct: 19286 ATTTAATTAATTATTATATATTTATAAATTTATATATTATTGAATATTTATATATAATAT 19345 Query: 1998 AGTTATTTCTGGA 2010 A TAT T T GA Sbjct: 19346 ATATATATATAGA 19358 Score = 265 (39.8 bits), Expect = 0.0015, Sum P(2) = 0.0015 Identities = 303/536 (56%), Positives = 303/536 (56%), Strand = Plus / Plus Query: 1475 AAGTAATATAGGCTATATTTTTC--TTAGTCATATCCTGAAACATTTATGTTCTTTTCCT 1532 AA TAAT TA TATATTT T TT T ATAT T AA ATTTAT T T T T Sbjct: 17436 AATTAAT-TATTATATATTTATAAATTTAT-ATATTATTGAATATTTATAATATATA--T 17491 Query: 1533 TTAGATACTCAAAAAACCACAGCATC-AC-TAAGTTAAATTACAAGTCTGCTGCTCTGTC 1590 TA ATA T AAAAA A A AT A TAA TTAA TA AA T T T TC Sbjct: 17492 ATATATA-TAGAAAAATTAAATTATTTAAATAATTTAATATA-AATTTTTTAAAAATTTC 17549 Query: 1591 CAGTAAAT-TAATAAGATTA-AGGAAATCTATAACTCTTATAGTTCA-GTAAATTGAAAT 1647 TAAAT TA TA TTA A AAAT T TA T TA A T CA GT TT AAA Sbjct: 17550 T--TAAATGTATTATTTTTATAAAAAATATTTATATAATAAAAT-CATGTTTTTTAAAAA 17606 Query: 1648 ATTAAATACTTAATTTTCAGCTTTAGTCATTCTGAAAAGTGTT-TA-TTTCTAGATGTTT 1705 AT AAA A AATTTT A T A ATT T AA G T TA TTT T AT TTT Sbjct: 17607 AT-AAACAAAAAATTTTTAA-TAAATAAATTTTATAATGAAATATAATTTATTTATTTTT 17664 Query: 1706 CTTAACCTAATTGCATGTTTATTGACAAAT-TACCTTTTTTTTTTAAGACCACATTTCCT 1764 C T TAA A TTT TT A AAA TA TTTTTTTTTTAA A A A T T Sbjct: 17665 CATTTT-TAAAAAAAAATTTTTTAAAAAAAATAA-TTTTTTTTTTAAAAAAAAACTATAT 17722 Query: 1765 ACTAAGGATTAAGGTCT-GACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGT 1823 ACTAA AT AA T GA A T TA A T TA A TTT T ATT A A T Sbjct: 17723 ACTAATTATAAATTAATAGATATT-TATATATATATAAATATTTAATATATT-ATTATAT 17780 Query: 1824 GGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAATAGAGTTAGGATCTG 1883 C T TA TT AAT AAA T TA A T T T TAGA TA T T Sbjct: 17781 ATC--TAA-TAAT-TTAAATAAAAAATTTTAAAATTTAAAAATG-TAGATATAATTTATA 17835 Query: 1884 GTAGAT-A-ATTG-CACCTCAATGAGGCATAACTTTGCAA-ATATTAG-ACTATGCCA-T 1937 A T A ATT CA T AT AT A TTT ATAT A A TAT A T Sbjct: 17836 AAAATTTATATTCTCATATTTATTTATTATTAATTTAATTTATATAAATAATATAATAAT 17895 Query: 1938 TTCATGAGTTAT-AGATTGTTATAATGATCTTGTATTTTTATGTTCATTTATTGAAGTTC 1996 TT AT A TTAT A AT TTATAA AT TT TAT TT TG ATTTAT AA T Sbjct: 17896 TTAATTAATTATTATATATTTATAA--AT-TTATATATTATTGAATATTTATATAATATA 17952 Query: 1997 TAGTTATTTCTGGA 2010 TA TAT T T GA Sbjct: 17953 TATATATATATAGA 17966 Score = 190 (28.5 bits), Expect = 0.00031, Sum P(2) = 0.00031 Identities = 150/253 (59%), Positives = 150/253 (59%), Strand = Plus / Plus Query: 597 TTGTTCATATTGGTTATATTTA-AATAGTATA--AAATTCCTGTTGGGTGGGAGTGTTCC 653 TTG T A AT TT T TTA AATA TATA AAATTC TT T A T TTC Sbjct: 4166 TTGATTA-ATACCTTCTCGTTACAATATTATATGAAATTCAATTTTATTA--ACTCTTCA 4222 Query: 654 CAGAGCATTTGAATTAGACATTTGGTCTCCTTTGCCCAG--TGTATCTCCTTTTGATCTT 711 A AG ATTT AA ATT GG C C T G CA TG ATCT CTTTT AT T Sbjct: 4223 TAAAGAATTTAAAACTTT-ATTAGGAC-CATCAGGTCATAATGGATCTACTTTT-AT--T 4277 Query: 712 TTTATTTCTTGAAAAATACTATCCCTTTGAAATAGTGTAATTGTAGAATGTTCATCTAGG 771 TTTATTTCTT A A TA T T AATA T T AT G A AT T CAT TA Sbjct: 4278 TTTATTTCTTTATTTTCATTAATTTTATTTAATAATTTCATAGGATTATTTCCATATATT 4337 Query: 772 GTTCTAGCTAGTATAAATTAAATAGTTGTAAATTAAGCTTTGGTTGTGAAGGATAT--TT 829 TT TA C AG A AA A TA T TAA TT A CTTT G T T A TAT TT Sbjct: 4338 -TT-TA-CAAGAACAAGACATTTAACTTTAACTTTATCTTTAGCTTT-ACCTTTATGATT 4393 Query: 830 AGTATATTATAGTATTTGCA 849 A T T TTATA TAT TG A Sbjct: 4394 A-TGTTTTATATTATATGGA 4412 Score = 187 (28.1 bits), Expect = 3.6, Sum P(2) = 0.97 Identities = 149/265 (56%), Positives = 149/265 (56%), Strand = Plus / Plus Query: 1510 TGAAACATTTATGTTCTTTTCCTT-TAGATACTCAAAAAACCACAGCATCACTAAGTTAA 1568 T A A ATTTAT T TC T TA ATA AA AAA A AT A TAA TTAA Sbjct: 15514 TAATAAATTTAT-TAAAAATCAATATATATATATAATAAATAATTTGATTATTAA-TTAA 15571 Query: 1569 ATTACAAGTCTGCTGC-TCTGTCCAGTAAATTAATAAGATTAAGGAAATCTATAACTCTT 1627 ATTA A G T T T T A TAA TTA T AT A AAATCT AA TT Sbjct: 15572 ATTATACGAATAATAAATATAATAAATAATTTATTTTAATCACT-AAATCTGAAATAATT 15630 Query: 1628 ATAGTTCAGTAAATTGAAATAT-TAAATACTTA-ATTTTCAGCTTTAGTCATTC-TGAA- 1683 ATA T TA AT A ATAT TA ATAC TA AT T A T TA CAT T AA Sbjct: 15631 ATATATATATATATATATATATATATATACATATATATATATATATATACATAAATAAAT 15690 Query: 1684 AAGTGTTTATTTCTAGATG-T-TTCTTAACCTAATTGCATGTTTATTGACAAATTACCT- 1740 AA T ATTT T T TTC TAA T ATT AT TTA AC A A T Sbjct: 15691 AAAAATAAATTTATTCCCCCTATTCATAAATTTATTATATAATTAAA-ACTTAAAAAGTA 15749 Query: 1741 TTTTTTTTTAAGACCACATTTCCTACTAA 1769 TTTTTTTTTAA A A ATT TA TAA Sbjct: 15750 TTTTTTTTTAAAAAAAAATTATTTATTAA 15778 Score = 173 (26.0 bits), Expect = 0.0017, Sum P(2) = 0.0017 Identities = 257/458 (56%), Positives = 257/458 (56%), Strand = Plus / Plus Query: 511 TTTTACAGTAGAATCTGAGAGAAATTTAGCAAGCTACTTTGTCAGTTTAGAGTGTAAATG 570 TTTTA A T AAT A A AAATTTA AA TA T T A T A A T TA T Sbjct: 17257 TTTTAAATTTTAATAATAAATAAATTTAATAAT-TAATAATTAAATAAA-A-TCTAT-TC 17312 Query: 571 TACAATCAAAGTTTC-TTAGCTAATACTTG--TTCATATTGGTTATATTTAAATAGTATA 627 A AT AA TTT TTA TAATA T TT A AT T ATA TTAAATA AT Sbjct: 17313 -ATTATTAATATTTAATTAA-TAATAAATAAATTTA-ATAACTAATAATTAAATAAAATT 17369 Query: 628 AAATTCCTGTTGGG-TGGGAGTGTTCCCAGAGCATTTGAATTAGACATTTGGTCTCCTTT 686 A TT T T T A T T A A ATT ATT TTT T T TTT Sbjct: 17370 TATTTATTACTAATATTTAATTAATAATAAAAAATT---ATTTTTTTTTTTTTTTTTTTT 17426 Query: 687 GCCCAGTGTATCTCCTTTTGATCTTTTTATTTCTTGAAAAAT-ACTATCCCTTTGAAATA 745 A T TA T TT T AT T TTTAT TT A A AT A T TTT AATA Sbjct: 17427 TAATAATTTAATTAATTATTATATATTTATAAATTTATATATTATTGAATATTTATAATA 17486 Query: 746 GTGTAATTGTAGAATGTTCATCTAGGGT-TCTAGCTAGTATAAATTAAATAGTTGTAAAT 804 T TA T TA A G A TA T T TA TA T TAA TAAAT TT TAAA Sbjct: 17487 -TATATATATATATAGAAAAATTAAATTATTTAAATAATTTAATATAAATTTTT-TAAA- 17543 Query: 805 TAAGCT-TTGGTTGTGAAGGATATTTAGTATATTATAGT-ATTTGCACCCTGTCCAATGC 862 AA T TT TGT A AT TTTA TA A ATA T AT T A TC T Sbjct: 17544 -AATTTCTTAAATGT-ATT-ATTTTTA-TAAAAAATATTTATATA-ATAAAATCATGTTT 17598 Query: 863 ATCACAGAAATTCACAGGCAGCTTTAAATAGCAATGCAGTGTACACCTGATAG-TA-TTT 920 T A A AAAT ACA A TTT AATA AAT A T TA A TGA A TA TTT Sbjct: 17599 TTTAAA-AAATAAACAAAAAATTTTTAATA--AATAAATTTTATAA-TGAAATATAATTT 17654 Query: 921 GTTT--TTGTGATCTGTTAACTTAAAATCCT---AAAAT--TAATTTTTTTTTTA 968 TTT TT T AT T TTAA AAAAT T AAAA TAATTTTTTTTTTA Sbjct: 17655 ATTTATTTTTCATTT-TTAAAAAAAAATTTTTTAAAAAAAATAATTTTTTTTTTA 17708 Score = 160 (24.0 bits), Expect = 0.0060, Sum P(2) = 0.0060 Identities = 132/222 (59%), Positives = 132/222 (59%), Strand = Plus / Plus Query: 749 TAATTGT-AGAATGTTCA-TCTAGGGTTCTAGCTAGTATAAAT-TAAATAGTTGTAAATT 805 TAATT T A AA TTCA T TA TT TA TA TATA AT TA ATA TT TAA TT Sbjct: 15878 TAATTTTTAAAAAATTCAATTTATATTTATATATA-TATATATATATATAATTTTAATTT 15936 Query: 806 AAGCTTTGGTTGTG-AAGGATATTTAG-TATATTATAGTATTTGC-ACC-CTGTCC-AAT 860 TT TT T AA ATA T A TA TTAT TA T C A CTG AAT Sbjct: 15937 TCAATTAAATTATATAAATATAATAAAATAATTTATTTTAATCACTAAATCTGAAATAAT 15996 Query: 861 GCATCACAGAAATTCACAGGCAGCTTTAAATA-GCAATGCAGTGTACACCTGATAGTATT 919 AT A A A AT A A A T AAA A G AA A T TA CC TA T T Sbjct: 15997 TAATTATATATATATATATATATATAAAAAAATGAAAATAAATTTATTCCCCCTATTCAT 16056 Query: 920 TGTTTTTGTGATCTGT-TAACTTAAAATCCTAAAATTAATTTTTTTTTTA 968 TTT AT TGT TAA TTAAAA C TAAAA ATTTTTTTTTTA Sbjct: 16057 AAATTT----AT-TGTATAA-TTAAAA-CTTAAAAAATATTTTTTTTTTA 16099 Score = 160 (24.0 bits), Expect = 0.0060, Sum P(2) = 0.0060 Identities = 132/222 (59%), Positives = 132/222 (59%), Strand = Plus / Plus Query: 749 TAATTGT-AGAATGTTCA-TCTAGGGTTCTAGCTAGTATAAAT-TAAATAGTTGTAAATT 805 TAATT T A AA TTCA T TA TT TA TA TATA AT TA ATA TT TAA TT Sbjct: 16561 TAATTTTTAAAAAATTCAATTTATATTTATATATA-TATATATATATATAATTTTAATTT 16619 Query: 806 AAGCTTTGGTTGTG-AAGGATATTTAG-TATATTATAGTATTTGC-ACC-CTGTCC-AAT 860 TT TT T AA ATA T A TA TTAT TA T C A CTG AAT Sbjct: 16620 TCAATTAAATTATATAAATATAATAAAATAATTTATTTTAATCACTAAATCTGAAATAAT 16679 Query: 861 GCATCACAGAAATTCACAGGCAGCTTTAAATA-GCAATGCAGTGTACACCTGATAGTATT 919 AT A A A AT A A A T AAA A G AA A T TA CC TA T T Sbjct: 16680 TAATTATATATATATATATATATATAAAAAAATGAAAATAAATTTATTCCCCCTATTCAT 16739 Query: 920 TGTTTTTGTGATCTGT-TAACTTAAAATCCTAAAATTAATTTTTTTTTTA 968 TTT AT TGT TAA TTAAAA C TAAAA ATTTTTTTTTTA Sbjct: 16740 AAATTT----AT-TGTATAA-TTAAAA-CTTAAAAAATATTTTTTTTTTA 16782 Score = 143 (21.5 bits), Expect = 0.048, Sum P(2) = 0.047 Identities = 163/280 (58%), Positives = 163/280 (58%), Strand = Plus / Plus Query: 691 AGTGTATCTCCTTTTGATCTTTTTATTTCTTGAAAAATACTATCCCT-TTGAAATAGTGT 749 A T TA T TT T AT T TTTAT TT A A AT T T T TT A ATA T T Sbjct: 17893 AATTTAATTAATTATTATATATTTATAAATTTATATATTAT-TGAATATTTATATAATAT 17951 Query: 750 AATTGTAGA-AT-GTTCATCTAGGGT-TCTAGCTAGTATAAATTAAATAGTTGTAAATTA 806 A T TA A AT G A TA T T TA TA T TAA TAAAT TT TAAA A Sbjct: 17952 ATATATATATATAGAAAAATTAAATTATTTAAATAATTTAATATAAATTTTT-TAAA--A 18008 Query: 807 AGCT-TTGGTTGTGAAGGATATTTAGTATATTATAGT-ATTTGCACCCTGTCCAATGCAT 864 A T TT TGT A AT TTTA TA A ATA T AT T A TC T T Sbjct: 18009 ATTTCTTAAATGT-ATT-ATTTTTA-TAAAAAATATTTATATA-ATAAAATCATGTTTTT 18064 Query: 865 CACAGAAATTCACAGGCAGCTTTAAATAGCAATGCAGTGTACACCTGATAG-TA-TTTGT 922 A A AAAT ACA A TTT AATA AAT A T TA A TGA A TA TTT T Sbjct: 18065 TAAA-AAATAAACAAAAAATTTTTAATA--AATAAATTTTATAA-TGAAATATAATTTAT 18120 Query: 923 TT--TTGTGA-TCTGTTAACTTAAAATCCTAAAAT---TAATTTTTTTTTTA 968 TT TT T A T T TT A AA T TAAAA TAATTTTTTTTTTA Sbjct: 18121 TTATTTTTCAATTTTTTTAAAAAATTTTTTAAAAAAAATAATTTTTTTTTTA 18172 Score = 142 (21.3 bits), Expect = 0.16, Sum P(2) = 0.15 Identities = 158/269 (58%), Positives = 158/269 (58%), Strand = Plus / Plus Query: 702 TTTTGATCTTTTTATTTCTTGAAAAATACTATCCCT-TTGAAATAGTGTAATTGTAGA-A 759 TT T AT T TTTAT TT A A AT T T T TT A ATA T TA T TA A A Sbjct: 18368 TTATTATATATTTATAAATTTATATATTAT-TGAATATTTATATAATATATATATATATA 18426 Query: 760 T-GTTCATCTAGGGT-TCTAGCTAGTATAAATTAAATAGTTGTAAATTAAGCT-TTGGTT 816 T G A TA T T TA TA T TAA TAAAT TT TAAA AA T TT T Sbjct: 18427 TAGAAAAATTAAATTATTTAAATAATTTAATATAAATTTTT-TAAA--AATTTCTTAAAT 18483 Query: 817 GTGAAGGATATTTAGTATATTATAGT-ATTTGCACCCTGTCCAATGCATCACAGAAATTC 875 GT A AT TTTA TA A ATA T AT T A TC T T A A AAAT Sbjct: 18484 GT-ATT-ATTTTTA-TAAAAAATATTTATATA-ATAAAATCATGTTTTTTAAA-AAATAA 18538 Query: 876 ACAGGCAGCTTTAAATAGCAATGCAGTGTACACCTGATAG-TA-TTTGTTT--TTGTGA- 930 ACA A TTT AATA AAT A T TA A TGA A TA TTT TTT TT T A Sbjct: 18539 ACAAAAAATTTTTAATA--AATAAATTTTATAA-TGAAATATAATTTATTTATTTTTCAA 18595 Query: 931 TCTGTTAACTTAAAATCCTAAAAT---TAATTTTTTTTTTA 968 T T TT A AA T TAAAA TAATTTTTTTTTTA Sbjct: 18596 TTTTTTTAAAAAATTTTTTAAAAAAAATAATTTTTTTTTTA 18636 >U10556;U00093 Saccharomyces cerevisiae chromosome VIII cosmid 9205. Length = 39,203 Minus Strand HSPs: Score = 319 (47.9 bits), Expect = 0.00032, P = 0.00032 Identities = 91/118 (77%), Positives = 91/118 (77%), Strand = Minus / Plus Query: 2331 ACCAACTTATTCATCATCATCATC---TTCTTCTTCATCTTCATCTTCTTCATCTTCCTC 2275 A CA CTT TCATCATC TCATC TTCTTCT CATC TCATC TC TC TC TC TC Sbjct: 14014 ATCATCTTCATCATCATCCTCATCGCCTTCTTCTCCATCATCATCATCATCGTCATCGTC 14073 Query: 2274 CTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTT 2216 TC TC TCATCCTC TCATC TCCTCATC TC TC TCTTC T TT TCTTGCTTT Sbjct: 14074 ATCGTCATCATCCTCGTCATCGTCCTCATCGTCTTCATCTTCACT-TTCGTCTTGCTTT 14131 Score = 299 (44.9 bits), Expect = 0.0026, P = 0.0026 Identities = 105/156 (67%), Positives = 105/156 (67%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC TC TCATCATC TC TC TCATC TCATC TCTTCATC TC TCCTC TC Sbjct: 13980 CTTCTTCTTCTTCATCATCATCATCCTCATCATCATCATCTTCATCATCATCCTCATCGC 14039 Query: 2266 CATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCC 2208 C TC TCT CATC TC TCATC TC TC TC TC T C T TC T CT T TC CC Sbjct: 14040 CTTCTTCTCCATCATCATCATCATCGTCATCGTCAT-CGTCATCATCCTCGTCATCGTCC 14098 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTTT-CCT 2172 T C CT C T TT T C TC GCTTT CCT Sbjct: 14099 TCATCGTCTTCATCTTCACTTTCGTCTTGCTTTGCCT 14135 Score = 293 (44.0 bits), Expect = 0.0049, P = 0.0048 Identities = 83/108 (76%), Positives = 83/108 (76%), Strand = Minus / Plus Query: 2326 CTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCT 2267 CTT TTC CATCATCATC TC TC TCATC TCATC TC TCATC TC TC TC TCCT Sbjct: 14040 CTTCTTCTCCATCATCATCATCATCGTCATCGTCATCGTCATCATCCTCGTCATCGTCCT 14099 Query: 2266 CATCCTCTTCATCTTC-CTCATCTTCCTCCTCTTCCTTCT-TTTTCTTG 2220 CATC TCTTCATCTTC CT TC TC T CT T CCT T TTTTC TG Sbjct: 14100 CATCGTCTTCATCTTCACTT-TCGTCTTGCTTTGCCTGATGTTTTCCTG 14147 Score = 286 (42.9 bits), Expect = 0.010, P = 0.010 Identities = 78/104 (75%), Positives = 78/104 (75%), Strand = Minus / Plus Query: 2331 ACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTC 2272 | || | | ||||||||||||||||| || ||||| ||||| |||| ||| | || || Sbjct: 13996 ATCATCATCCTCATCATCATCATCTTCATCATCATCCTCATCGCCTTCTTCTCCATCATC 14055 Query: 2271 CTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCT 2228 || ||||| || || || || ||||| ||||| || || | || Sbjct: 14056 ATCATCATCGTCATCGTCATCGTCATCATCCTCGTCATCGTCCT 14099 Score = 285 (42.8 bits), Expect = 0.011, P = 0.011 Identities = 91/128 (71%), Positives = 91/128 (71%), Strand = Minus / Plus Query: 2329 CAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCT 2270 CA C T TCATC TCATCATC TC TC TC CTTC TCT C TCATC TC TC TC T Sbjct: 14007 CATCATCATCATCTTCATCATCATCCTCATCGCCTTCTTCTCCATCATCATCATCATCGT 14066 Query: 2269 CCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTG-CTTTTTTCA 2211 C TC TC TC TCATC TCCTC TC TC TCCTC TC T CTT TCTT CTTT TC Sbjct: 14067 CATCGTCATCGTCATCATCCTCGTCATCGTCCTCATCGT-CTTCATCTTCACTTTCGTCT 14125 Query: 2210 -GCCTTGAC 2203 GC TTG C Sbjct: 14126 TGCTTTGCC 14134 Score = 274 (41.1 bits), Expect = 0.036, P = 0.035 Identities = 100/151 (66%), Positives = 100/151 (66%), Strand = Minus / Plus Query: 2315 TCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCA 2256 TC TC TCTTCTTC TCATC TCATC TC TCATC TC TC TC TC TCATCCTC TC Sbjct: 13979 TCTTCTTCTTCTTCATCATCATCATCCTCATCATCATCATCTTCATCATCATCCTCATCG 14038 Query: 2255 TCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT-TCAGCCTTGACAACTCC 2197 CTTC TC C TC TC TC TC T C T TC T T T TCA CCT G CA C C Sbjct: 14039 CCTTCTTCTCCATCATCATCATCAT-CGTCATCGTCATCGTCATCATCCTCGTCATCGTC 14097 Query: 2196 CTTTTTTGCTGCATCAGG-CTTTCCTTTAGCT 2166 CT T CT CATC CTTTC T T GCT Sbjct: 14098 CTCATCGTCTTCATCTTCACTTTCGTCTTGCT 14129 >M60025;J04626;M22228 Rat carcinoembryonic antigen (CEA3) gene, exon X. Length = 1185 Plus Strand HSPs: Score = 312 (46.8 bits), Expect = 0.00036, P = 0.00036 Identities = 108/159 (67%), Positives = 108/159 (67%), Strand = Plus / Plus Query: 2169 TAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAA 2228 TAA GGAA CCT A CAG A A AA A TT T A G TGA A GCA GA AA Sbjct: 361 TAATGGAA--CCTCAAACAGAACAGAAAACAATTCTGAGAG-TGAGCATTGCATGAGGAA 417 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GA GGA GA GGAAGA GAGGA GA GA GAGGA GA GAGGAGGAGGAAGA GAA Sbjct: 418 GA-GGAGGAACGGGAAGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAAGAGGAATG 476 Query: 2289 AGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGT 2327 GA GA GA GA GAAGA GA GA GA GA GAA A GT Sbjct: 477 GGAAGAGGAGGAGGAAGAGGAGGAAGAGGAGGAAGAGGT 515 >U11584 Drosophila melanogaster Oregon-R mitochondrial A+T region. Length = 4601 Plus Strand HSPs: Score = 281 (42.2 bits), Expect = 0.00038, Sum P(2) = 0.00037 Identities = 313/555 (56%), Positives = 313/555 (56%), Strand = Plus / Plus Query: 1456 TACAAA-AACAGGCTAGACAAAGTAATATAGGCTATATTTTTC--TTAGTCATATCCTGA 1512 TA AAA AA A TA AA TAAT TA TATATTT T TT T ATAT T Sbjct: 2962 TATAAATAATATAATAATTTAATTAAT-TATTATATATTTATAAATTTAT-ATATTATTG 3019 Query: 1513 AACATTTATGTTCTTTTCCTTTAGATACTCAAAAAACCACAGCATC-AC-TAAGTTAAAT 1570 AA ATTTAT T T T T TA ATA T AAAAA A A AT A TAA TTAA Sbjct: 3020 AATATTTATATAATATATATATATATA-TAGAAAAATTAAATTATTTAAATAATTTAATA 3078 Query: 1571 TACAAGTCTGCTGCTCTGTCCAGTAAAT-TAATAAGATTA-AGGAAATCTATAACTCTTA 1628 TA AA T T T TC TAAAT TA TA TTA A AAAT T TA T TA Sbjct: 3079 TA-AATTTTTTAAAAATTTCT--TAAATGTATTATTTTTATAAAAAATATTTATATAATA 3135 Query: 1629 TAGTTCA-GTAAATTGAAATATTAAATACTTAATTTTCAGCTTTAGTCATTCTGAAAAGT 1687 A T CA GT TT AAA AT AAA A AATTTT A T A ATT T AA G Sbjct: 3136 AAAT-CATGTTTTTTAAAAAAT-AAACAAAAAATTTTTAA-TAAATAAATTTTATAATGA 3192 Query: 1688 GTT-TATTTCTAGATGTTTCTTAACCTAATTGCATG-TTTATTGACAAAT-TACCTTTTT 1744 T TA TT TA T TTT T AA T TT A TTT TT A AAA TA TTTTT Sbjct: 3193 AATATAATT-TATTTATTTTTCAATTTTTTTAAAAAATTTTTTAAAAAAAATAA-TTTTT 3250 Query: 1745 TTTTTAAGACCACATTTCCTACTAAGGATTAAGGTCT-GACAGTGTAAACCTGTAGAGTG 1803 TTTTTAA A A A T TACTAA AT AA T GA A T TA A T TA A Sbjct: 3251 TTTTTAAAAAAAAACTATATACTAATTATAAATTAATAGATATT-TATATATATATAAAT 3309 Query: 1804 CTTTTTTGCATTCAGAAGGTGGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCTGGT 1863 TTT T ATT A A T C T TA TT AAT AAA T TA A T T Sbjct: 3310 ATTTAATATATT-ATTATATATC--TAA-TAAT-TTAAATAAAAAATTTTAAAATTTAAA 3364 Query: 1864 TTTAATAGAGTTAGGATCTGGTAGATAAT-TGCACCTCAATGAGGCATAACTTTGCAAAT 1922 T TAGA TA T T A T AT T C C T A T A AT A T AAT Sbjct: 3365 AATG-TAGATATAATTTATAAAAATTTATATTCTCAT-ATTTATTTATTATTAATTTAAT 3422 Query: 1923 ATTAGACTATGCCATTTCATGAGTTA-TAGATTGTTATA-ATG-ATCT-TGTATTT-TTA 1977 TTA A TA AT T ATGA TTA T ATT TTATA AT AT T TAT T TTA Sbjct: 3423 -TTATA-TAAATAATATAATGATTTAATTAATTATTATATATTTATAAATTTATATATTA 3480 Query: 1978 T-GTTCATTTATTGAAGTTCTAGTTATTTCTGGA 2010 T G ATTTAT AA T TA TAT T T GA Sbjct: 3481 TTGAATATTTATATAATATATATATATATATAGA 3514 Score = 277 (41.6 bits), Expect = 0.00056, Sum P(2) = 0.00056 Identities = 303/536 (56%), Positives = 303/536 (56%), Strand = Plus / Plus Query: 1475 AAGTAATATAGGCTATATTTTTC--TTAGTCATATCCTGAAACATTTATGTTCTTTTCCT 1532 AA TAAT TA TATATTT T TT T ATAT T AA ATTTAT T T T T Sbjct: 3446 AATTAAT-TATTATATATTTATAAATTTAT-ATATTATTGAATATTTATATAATATATAT 3503 Query: 1533 TTAGATACTCAAAAAACCACAGCATC-AC-TAAGTTAAATTACAAGTCTGCTGCTCTGTC 1590 TA ATA T AAAAA A A AT A TAA TTAA TA AA T T T TC Sbjct: 3504 ATATATA-TAGAAAAATTAAATTATTTAAATAATTTAATATA-AATTTTTTAAAAATTTC 3561 Query: 1591 CAGTAAAT-TAATAAGATTA-AGGAAATCTATAACTCTTATAGTTCA-GTAAATTGAAAT 1647 TAAAT TA TA TTA A AAAT T TA T TA A T CA GT TT AAA Sbjct: 3562 T--TAAATGTATTATTTTTATAAAAAATATTTATATAATAAAAT-CATGTTTTTTAAAAA 3618 Query: 1648 ATTAAATACTTAATTTTCAGCTTTAGTCATTCTGAAAAGTGTT-TATTTCTAGATGTTTC 1706 AT AAA A AATTTT A T A ATT T AA G T TA TT TA T TTT Sbjct: 3619 AT-AAACAAAAAATTTTTAA-TAAATAAATTTTATAATGAAATATAATT-TATTTATTTT 3675 Query: 1707 TTAACCTAATTGCATG-TTTATTGACAAAT-TACCTTTTTTTTTTAAGACCACATTTCCT 1764 T AA T TT A TTT TT A AAA TA TTTTTTTTTTAA A A A T T Sbjct: 3676 TCAATTTTTTTAAAAAATTTTTTAAAAAAAATAA-TTTTTTTTTTAAAAAAAAACTATAT 3734 Query: 1765 ACTAAGGATTAAGGTCT-GACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGT 1823 ACTAA AT AA T GA A T TA A T TA A TTT T ATT A A T Sbjct: 3735 ACTAATTATAAATTAATAGATATT-TATATATATATAAATATTTAATATATT-ATTATAT 3792 Query: 1824 GGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAATAGAGTTAGGATCTG 1883 C T TA TT AAT AAA T TA A T T T TAGA TA T T Sbjct: 3793 ATC--TAA-TAAT-TTAAATAAAAAATTTTAAAATTTAAAAATG-TAGATATAATTTATA 3847 Query: 1884 GTAGATAAT-TGCACCTCAATGAGGCATAACTTTGCAAATATTAGACTATGCCATTTCAT 1942 A T AT T C C T A T A AT A T AAT TTA A TA AT T AT Sbjct: 3848 AAAATTTATATTCTCAT-ATTTATTTATTATTAATTTAAT-TTATA-TAAATAATATAAT 3904 Query: 1943 GAGTTA-TAGATTGTTATA-ATG-ATCT-TGTATTT-TTAT-GTTCATTTATTGAAGTTC 1996 GA TTA T ATT TTATA AT AT T TAT T TTAT G ATTTAT AA T Sbjct: 3905 GATTTAATTAATTATTATATATTTATAAATTTATATATTATTGAATATTTATATAATATA 3964 Query: 1997 TAGTTATTTCTGGA 2010 TA TAT T T GA Sbjct: 3965 TATATATATATAGA 3978 Score = 266 (39.9 bits), Expect = 0.0017, Sum P(2) = 0.0017 Identities = 300/536 (55%), Positives = 300/536 (55%), Strand = Plus / Plus Query: 1475 AAGTAATATAGGCTATATTTTTC--TTAGTCATATCCTGAAACATTTATGTTCTTTTCCT 1532 AA TAAT TA TATATTT T TT T ATAT T AA ATTTAT T T T T Sbjct: 3910 AATTAAT-TATTATATATTTATAAATTTAT-ATATTATTGAATATTTATATAATATATAT 3967 Query: 1533 TTAGATACTCAAAAAACCACAGCATC-AC-TAAGTTAAATTACAAGTCTGCTGCTCTGTC 1590 TA ATA T AAAAA A A AT A TAA TTAA TA AA T T T TC Sbjct: 3968 ATATATA-TAGAAAAATTAAATTATTTAAATAATTTAATATA-AATTTTTTAAAAATTTC 4025 Query: 1591 CAGTAAAT-TAATAAGATTA-AGGAAATCTATAACTCTTATAGTTCAGTAAATTGAAATA 1648 TAAAT TA TA TTA A AAAT T TA T TA A T CA T TT AA A Sbjct: 4026 T--TAAATGTATTATTTTTATAAAAAATATTTATATAATAAAAT-CATTTTTTTTTAAAA 4082 Query: 1649 TTAAATACTTAATTTTCAGCTTTAGTCATTCTGAAAAGTGTT-TA-TTTCTAGATGTTTC 1706 TAAA A AATTTT A T A ATT T AA G T TA TTT T AT TTTC Sbjct: 4083 ATAAACAAAAAATTTTTAA-TAAATAAATTTTATAATGAAATATAATTTATTTATTTTTC 4141 Query: 1707 -TTAACCTAATTGCATGTTTATTGACAAATTACCTTTTTTTTTTAAGACCACATTTCCTA 1765 TT TAA A TTT TT A AAA A TTTTTTTTT AA A A T T TA Sbjct: 4142 ATTTTTTTAAAAAAAATTTT-TTAAAAAAAAATATTTTTTTTTAAAAAAAAACTATA-TA 4199 Query: 1766 CTAAGGATTAAGGTCT-GACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGTG 1824 CTAA AT AA T GA A T TA A T TA A TTT T ATT A A T Sbjct: 4200 CTAATTATAAATTAATAGATATT-TATATATATATAAATATTTAATATATT-ATTATATA 4257 Query: 1825 GCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAATAGAGTTAGGATCTGG 1884 C T TA TT AAT AAA T TA A T T TA TAGA TA T T Sbjct: 4258 TC--TAA-TAAT-TTAAATAAAAAATTTTAAAATTTAAAAATA-TAGATATAATTTATAA 4312 Query: 1885 TAGATAAT-TGCACCTCAATGAGGCATAACTTTGCAAATATTAGACTATGCCATTTCATG 1943 A T AT T C C T A T A AT A T AAT TTA A TA AT T ATG Sbjct: 4313 AAATTTATATTCTCAT-ATTTATTTATTATTAATTTAAT-TTATA-TAAATAATATAATG 4369 Query: 1944 AGTTA-TAGATTGTTATA-ATG-ATCT-TGTATTT-TTAT-GTTCATTTATTGAAGTTCT 1997 A TTA T ATT TTATA AT AT T TAT T TTAT G ATTTAT A T T Sbjct: 4370 ATTTAATTAATTATTATATATTTATAAATTTATATATTATTGAATATTTATATATAATAT 4429 Query: 1998 AGTTATTTCTGGA 2010 A TAT T T GA Sbjct: 4430 ATATATATATAGA 4442 Score = 265 (39.8 bits), Expect = 0.0070, Sum P(2) = 0.0069 Identities = 303/536 (56%), Positives = 303/536 (56%), Strand = Plus / Plus Query: 1475 AAGTAATATAGGCTATATTTTTC--TTAGTCATATCCTGAAACATTTATGTTCTTTTCCT 1532 AA TAAT TA TATATTT T TT T ATAT T AA ATTTAT T T T T Sbjct: 2520 AATTAAT-TATTATATATTTATAAATTTAT-ATATTATTGAATATTTATAATATATA--T 2575 Query: 1533 TTAGATACTCAAAAAACCACAGCATC-AC-TAAGTTAAATTACAAGTCTGCTGCTCTGTC 1590 TA ATA T AAAAA A A AT A TAA TTAA TA AA T T T TC Sbjct: 2576 ATATATA-TAGAAAAATTAAATTATTTAAATAATTTAATATA-AATTTTTTAAAAATTTC 2633 Query: 1591 CAGTAAAT-TAATAAGATTA-AGGAAATCTATAACTCTTATAGTTCA-GTAAATTGAAAT 1647 TAAAT TA TA TTA A AAAT T TA T TA A T CA GT TT AAA Sbjct: 2634 T--TAAATGTATTATTTTTATAAAAAATATTTATATAATAAAAT-CATGTTTTTTAAAAA 2690 Query: 1648 ATTAAATACTTAATTTTCAGCTTTAGTCATTCTGAAAAGTGTT-TA-TTTCTAGATGTTT 1705 AT AAA A AATTTT A T A ATT T AA G T TA TTT T AT TTT Sbjct: 2691 AT-AAACAAAAAATTTTTAA-TAAATAAATTTTATAATGAAATATAATTTATTTATTTTT 2748 Query: 1706 CTTAACCTAATTGCATGTTTATTGACAAAT-TACCTTTTTTTTTTAAGACCACATTTCCT 1764 C T TAA A TTT TT A AAA TA TTTTTTTTTTAA A A A T T Sbjct: 2749 CATTTT-TAAAAAAAAATTTTTTAAAAAAAATAA-TTTTTTTTTTAAAAAAAAACTATAT 2806 Query: 1765 ACTAAGGATTAAGGTCT-GACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGT 1823 ACTAA AT AA T GA A T TA A T TA A TTT T ATT A A T Sbjct: 2807 ACTAATTATAAATTAATAGATATT-TATATATATATAAATATTTAATATATT-ATTATAT 2864 Query: 1824 GGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAATAGAGTTAGGATCTG 1883 C T TA TT AAT AAA T TA A T T T TAGA TA T T Sbjct: 2865 ATC--TAA-TAAT-TTAAATAAAAAATTTTAAAATTTAAAAATG-TAGATATAATTTATA 2919 Query: 1884 GTAGAT-A-ATTG-CACCTCAATGAGGCATAACTTTGCAA-ATATTAG-ACTATGCCA-T 1937 A T A ATT CA T AT AT A TTT ATAT A A TAT A T Sbjct: 2920 AAAATTTATATTCTCATATTTATTTATTATTAATTTAATTTATATAAATAATATAATAAT 2979 Query: 1938 TTCATGAGTTAT-AGATTGTTATAATGATCTTGTATTTTTATGTTCATTTATTGAAGTTC 1996 TT AT A TTAT A AT TTATAA AT TT TAT TT TG ATTTAT AA T Sbjct: 2980 TTAATTAATTATTATATATTTATAA--AT-TTATATATTATTGAATATTTATATAATATA 3036 Query: 1997 TAGTTATTTCTGGA 2010 TA TAT T T GA Sbjct: 3037 TATATATATATAGA 3050 Score = 173 (26.0 bits), Expect = 0.00038, Sum P(2) = 0.00037 Identities = 257/458 (56%), Positives = 257/458 (56%), Strand = Plus / Plus Query: 511 TTTTACAGTAGAATCTGAGAGAAATTTAGCAAGCTACTTTGTCAGTTTAGAGTGTAAATG 570 TTTTA A T AAT A A AAATTTA AA TA T T A T A A T TA T Sbjct: 2341 TTTTAAATTTTAATAATAAATAAATTTAATAAT-TAATAATTAAATAAA-A-TCTAT-TC 2396 Query: 571 TACAATCAAAGTTTC-TTAGCTAATACTTG--TTCATATTGGTTATATTTAAATAGTATA 627 A AT AA TTT TTA TAATA T TT A AT T ATA TTAAATA AT Sbjct: 2397 -ATTATTAATATTTAATTAA-TAATAAATAAATTTA-ATAACTAATAATTAAATAAAATT 2453 Query: 628 AAATTCCTGTTGGG-TGGGAGTGTTCCCAGAGCATTTGAATTAGACATTTGGTCTCCTTT 686 A TT T T T A T T A A ATT ATT TTT T T TTT Sbjct: 2454 TATTTATTACTAATATTTAATTAATAATAAAAAATT---ATTTTTTTTTTTTTTTTTTTT 2510 Query: 687 GCCCAGTGTATCTCCTTTTGATCTTTTTATTTCTTGAAAAAT-ACTATCCCTTTGAAATA 745 A T TA T TT T AT T TTTAT TT A A AT A T TTT AATA Sbjct: 2511 TAATAATTTAATTAATTATTATATATTTATAAATTTATATATTATTGAATATTTATAATA 2570 Query: 746 GTGTAATTGTAGAATGTTCATCTAGGGT-TCTAGCTAGTATAAATTAAATAGTTGTAAAT 804 T TA T TA A G A TA T T TA TA T TAA TAAAT TT TAAA Sbjct: 2571 -TATATATATATATAGAAAAATTAAATTATTTAAATAATTTAATATAAATTTTT-TAAA- 2627 Query: 805 TAAGCT-TTGGTTGTGAAGGATATTTAGTATATTATAGT-ATTTGCACCCTGTCCAATGC 862 AA T TT TGT A AT TTTA TA A ATA T AT T A TC T Sbjct: 2628 -AATTTCTTAAATGT-ATT-ATTTTTA-TAAAAAATATTTATATA-ATAAAATCATGTTT 2682 Query: 863 ATCACAGAAATTCACAGGCAGCTTTAAATAGCAATGCAGTGTACACCTGATAG-TA-TTT 920 T A A AAAT ACA A TTT AATA AAT A T TA A TGA A TA TTT Sbjct: 2683 TTTAAA-AAATAAACAAAAAATTTTTAATA--AATAAATTTTATAA-TGAAATATAATTT 2738 Query: 921 GTTT--TTGTGATCTGTTAACTTAAAATCCT---AAAAT--TAATTTTTTTTTTA 968 TTT TT T AT T TTAA AAAAT T AAAA TAATTTTTTTTTTA Sbjct: 2739 ATTTATTTTTCATTT-TTAAAAAAAAATTTTTTAAAAAAAATAATTTTTTTTTTA 2792 Score = 160 (24.0 bits), Expect = 0.0014, Sum P(2) = 0.0014 Identities = 132/222 (59%), Positives = 132/222 (59%), Strand = Plus / Plus Query: 749 TAATTGT-AGAATGTTCA-TCTAGGGTTCTAGCTAGTATAAAT-TAAATAGTTGTAAATT 805 TAATT T A AA TTCA T TA TT TA TA TATA AT TA ATA TT TAA TT Sbjct: 962 TAATTTTTAAAAAATTCAATTTATATTTATATATA-TATATATATATATAATTTTAATTT 1020 Query: 806 AAGCTTTGGTTGTG-AAGGATATTTAG-TATATTATAGTATTTGC-ACC-CTGTCC-AAT 860 TT TT T AA ATA T A TA TTAT TA T C A CTG AAT Sbjct: 1021 TCAATTAAATTATATAAATATAATAAAATAATTTATTTTAATCACTAAATCTGAAATAAT 1080 Query: 861 GCATCACAGAAATTCACAGGCAGCTTTAAATA-GCAATGCAGTGTACACCTGATAGTATT 919 AT A A A AT A A A T AAA A G AA A T TA CC TA T T Sbjct: 1081 TAATTATATATATATATATATATATAAAAAAATGAAAATAAATTTATTCCCCCTATTCAT 1140 Query: 920 TGTTTTTGTGATCTGT-TAACTTAAAATCCTAAAATTAATTTTTTTTTTA 968 TTT AT TGT TAA TTAAAA C TAAAA ATTTTTTTTTTA Sbjct: 1141 AAATTT----AT-TGTATAA-TTAAAA-CTTAAAAAATATTTTTTTTTTA 1183 Score = 160 (24.0 bits), Expect = 0.0014, Sum P(2) = 0.0014 Identities = 132/222 (59%), Positives = 132/222 (59%), Strand = Plus / Plus Query: 749 TAATTGT-AGAATGTTCA-TCTAGGGTTCTAGCTAGTATAAAT-TAAATAGTTGTAAATT 805 TAATT T A AA TTCA T TA TT TA TA TATA AT TA ATA TT TAA TT Sbjct: 1645 TAATTTTTAAAAAATTCAATTTATATTTATATATA-TATATATATATATAATTTTAATTT 1703 Query: 806 AAGCTTTGGTTGTG-AAGGATATTTAG-TATATTATAGTATTTGC-ACC-CTGTCC-AAT 860 TT TT T AA ATA T A TA TTAT TA T C A CTG AAT Sbjct: 1704 TCAATTAAATTATATAAATATAATAAAATAATTTATTTTAATCACTAAATCTGAAATAAT 1763 Query: 861 GCATCACAGAAATTCACAGGCAGCTTTAAATA-GCAATGCAGTGTACACCTGATAGTATT 919 AT A A A AT A A A T AAA A G AA A T TA CC TA T T Sbjct: 1764 TAATTATATATATATATATATATATAAAAAAATGAAAATAAATTTATTCCCCCTATTCAT 1823 Query: 920 TGTTTTTGTGATCTGT-TAACTTAAAATCCTAAAATTAATTTTTTTTTTA 968 TTT AT TGT TAA TTAAAA C TAAAA ATTTTTTTTTTA Sbjct: 1824 AAATTT----AT-TGTATAA-TTAAAA-CTTAAAAAATATTTTTTTTTTA 1866 Score = 143 (21.5 bits), Expect = 0.011, Sum P(2) = 0.011 Identities = 163/280 (58%), Positives = 163/280 (58%), Strand = Plus / Plus Query: 691 AGTGTATCTCCTTTTGATCTTTTTATTTCTTGAAAAATACTATCCCT-TTGAAATAGTGT 749 A T TA T TT T AT T TTTAT TT A A AT T T T TT A ATA T T Sbjct: 2977 AATTTAATTAATTATTATATATTTATAAATTTATATATTAT-TGAATATTTATATAATAT 3035 Query: 750 AATTGTAGA-AT-GTTCATCTAGGGT-TCTAGCTAGTATAAATTAAATAGTTGTAAATTA 806 A T TA A AT G A TA T T TA TA T TAA TAAAT TT TAAA A Sbjct: 3036 ATATATATATATAGAAAAATTAAATTATTTAAATAATTTAATATAAATTTTT-TAAA--A 3092 Query: 807 AGCT-TTGGTTGTGAAGGATATTTAGTATATTATAGT-ATTTGCACCCTGTCCAATGCAT 864 A T TT TGT A AT TTTA TA A ATA T AT T A TC T T Sbjct: 3093 ATTTCTTAAATGT-ATT-ATTTTTA-TAAAAAATATTTATATA-ATAAAATCATGTTTTT 3148 Query: 865 CACAGAAATTCACAGGCAGCTTTAAATAGCAATGCAGTGTACACCTGATAG-TA-TTTGT 922 A A AAAT ACA A TTT AATA AAT A T TA A TGA A TA TTT T Sbjct: 3149 TAAA-AAATAAACAAAAAATTTTTAATA--AATAAATTTTATAA-TGAAATATAATTTAT 3204 Query: 923 TT--TTGTGA-TCTGTTAACTTAAAATCCTAAAAT---TAATTTTTTTTTTA 968 TT TT T A T T TT A AA T TAAAA TAATTTTTTTTTTA Sbjct: 3205 TTATTTTTCAATTTTTTTAAAAAATTTTTTAAAAAAAATAATTTTTTTTTTA 3256 Score = 142 (21.3 bits), Expect = 0.037, Sum P(2) = 0.037 Identities = 158/269 (58%), Positives = 158/269 (58%), Strand = Plus / Plus Query: 702 TTTTGATCTTTTTATTTCTTGAAAAATACTATCCCT-TTGAAATAGTGTAATTGTAGA-A 759 TT T AT T TTTAT TT A A AT T T T TT A ATA T TA T TA A A Sbjct: 3452 TTATTATATATTTATAAATTTATATATTAT-TGAATATTTATATAATATATATATATATA 3510 Query: 760 T-GTTCATCTAGGGT-TCTAGCTAGTATAAATTAAATAGTTGTAAATTAAGCT-TTGGTT 816 T G A TA T T TA TA T TAA TAAAT TT TAAA AA T TT T Sbjct: 3511 TAGAAAAATTAAATTATTTAAATAATTTAATATAAATTTTT-TAAA--AATTTCTTAAAT 3567 Query: 817 GTGAAGGATATTTAGTATATTATAGT-ATTTGCACCCTGTCCAATGCATCACAGAAATTC 875 GT A AT TTTA TA A ATA T AT T A TC T T A A AAAT Sbjct: 3568 GT-ATT-ATTTTTA-TAAAAAATATTTATATA-ATAAAATCATGTTTTTTAAA-AAATAA 3622 Query: 876 ACAGGCAGCTTTAAATAGCAATGCAGTGTACACCTGATAG-TA-TTTGTTT--TTGTGA- 930 ACA A TTT AATA AAT A T TA A TGA A TA TTT TTT TT T A Sbjct: 3623 ACAAAAAATTTTTAATA--AATAAATTTTATAA-TGAAATATAATTTATTTATTTTTCAA 3679 Query: 931 TCTGTTAACTTAAAATCCTAAAAT---TAATTTTTTTTTTA 968 T T TT A AA T TAAAA TAATTTTTTTTTTA Sbjct: 3680 TTTTTTTAAAAAATTTTTTAAAAAAAATAATTTTTTTTTTA 3720 >X00551 Yeast gene for subunit VI of ubiquinol-cytochrome c reductase Length = 797 Plus Strand HSPs: Score = 307 (46.1 bits), Expect = 0.00038, P = 0.00038 Identities = 97/130 (74%), Positives = 97/130 (74%), Strand = Plus / Plus Query: 2206 AAGGCTGAAAAAAGC-AAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGAAGATGAAGAG 2262 AAGGC G A AA G AAGAAAAAGAAG GAA A G GGA GA GA GA GATGAAGA Sbjct: 215 AAGGCAGCAGAAGGAGAAGAAAAAGAAGAAGAAAATGGGGATGAAGATGAGGATGAAGAC 274 Query: 2263 GATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG--A-T 2319 GA GA GA GA GA GA GATGA GA GA GAAGATGA GAAGAAGA GA GA G A T Sbjct: 275 GAAGACGAAGATGATGATGATGATGACGACGAAGATGAGGAAGAAGAGGAAGAAGTCACT 334 Query: 2320 GAATAAGTTGG 2330 GA T AGTTGG Sbjct: 335 GA-TCAGTTGG 344 Score = 268 (40.2 bits), Expect = 0.028, P = 0.028 Identities = 84/112 (75%), Positives = 84/112 (75%), Strand = Plus / Plus Query: 2218 AGCAAGAAAAAGAAGGAAG-AGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGA 2276 AGCA GAA AA AAGG AG AG AGGA GA GA AAGA GAAGA ATG GGA GA GA Sbjct: 204 AGCATGAAGAA-AAGGCAGCAGAAGGA-GAAGAAAAAGAAGAAGAAAATGGGGATGAAGA 261 Query: 2277 GGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 GA GATGAAGA GA AGA GAAGA GA GATGATGATGA GA AAG TG Sbjct: 262 TGAGGATGAAGACGA---AGACGAAGATGATGATGATGATGACGACGAAGATG 311 Score = 257 (38.6 bits), Expect = 0.094, P = 0.090 Identities = 103/156 (66%), Positives = 103/156 (66%), Strand = Plus / Plus Query: 2166 AGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAA 2225 A CTAAAG AA C T TGC C GG G G C A G TGA A A C AG A Sbjct: 147 AACTAAAGATAACCGTTGTGC--CTGTTGTGGCCGCGGCCGAAGATGACGATAACGAGCA 204 Query: 2226 AAA-GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 A GAAG AA AGG G AGA G GAAGA AAGA GA GA A G GGA GAAGATG Sbjct: 205 GCATGAAGAAA-AGGCAGCAGAAGGAGAAGAAAAAGAAGAAGAAAATGGGGATGAAGATG 263 Query: 2285 AAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 A G GATGAAGA GAAGA GAAGATGATGATGATGA Sbjct: 264 A-G--GATGAAGACGAAGACGAAGATGATGATGATGA 297 Score = 220 (33.0 bits), Expect = 5.4, P = 1.0 Identities = 84/130 (64%), Positives = 84/130 (64%), Strand = Plus / Plus Query: 2200 GTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGA 2258 GTTGT GC G AA A A GA AA GA G A A GA GAA A G G AGA G Sbjct: 170 GTTGTGGCCGCGGCCGAAGATGACGATAACGA-GCAGCATGAAGAAAAGGCAGCAGAAGG 228 Query: 2259 AGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGA 2318 AGA GA A GA GA GA A G GA GAAGATGA GATGAAGA GAAGA GA GATGA Sbjct: 229 AGAAGAAAAAGAAGAAGAAAATGGGGATGAAGATGAGGATGAAGACGAAGACGAAGATGA 288 Query: 2319 TGAATAAGTTG 2329 TGA A G TG Sbjct: 289 TGATGATGATG 299 >Z82185 Human DNA sequence from Fosmid 24E5 Length = 35,506 Minus Strand HSPs: Score = 317 (47.6 bits), Expect = 0.00039, P = 0.00039 Identities = 103/139 (74%), Positives = 103/139 (74%), Strand = Minus / Plus Query: 2352 GAAAAAAAAAACTGCGCTAGAACCAACTTATTCATCATCATCATC-TTCTTCTTCATCTT 2294 GA AA AA A T C T GA C CTT TTC T T AT AT TTCTTCTTC TCTT Sbjct: 18468 GATAATAATGATTACAAT-GATTCTTCTTCTTCTTGTTAAT-ATGATTCTTCTTCTTCTT 18525 Query: 2293 CATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTCATCTTC-CT-CATCTTCCTCCTC 2236 C TCTTCTTC TCTTC TC TC TC TC TC TCTTC TCTTC CT C TCTTC TCCTC Sbjct: 18526 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTTCTTCTTCCTC 18585 Query: 2235 TTCCTTCTTTTTCTTGCTTTTT 2214 TTC TTCTT TTCTT CTT TT Sbjct: 18586 TTC-TTCTTCTTCTT-CTTCTT 18605 Score = 295 (44.3 bits), Expect = 0.0039, P = 0.0039 Identities = 103/149 (69%), Positives = 103/149 (69%), Strand = Minus / Plus Query: 2324 TATTCATCATCATCAT-CTTCTTCTTCATCTTCATCT---TCTTCATCTTCCTCCTCCTC 2269 TA T AT A AT AT CTTCTTCTTC T TT AT T TCTTC TCTTC TC TC TC Sbjct: 18473 TAATGATTACAATGATTCTTCTTCTTCTTGTTAATATGATTCTTCTTCTTCTTCTTCTTC 18532 Query: 2268 CTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTC-CTTCTTTTTCTTGCTTTT-TTCA 2211 TC TC TCTTC TCTTC TC TCTTC TC TCTTC CTTCTT TTCTT CT TT TTC Sbjct: 18533 TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTTCTTCTTCCTCTTCTTCT 18592 Query: 2210 GCCTTGACAACTCCCTTTTTTGCTGCATC 2182 C T C CT C T TT T CT C TC Sbjct: 18593 TCTTCTTCTTCTTCTTCTTCTTCTTCTTC 18621 >Y10687 Sulfolobus acidocaldarius gene encoding purine NTPase Length = 2790 Minus Strand HSPs: Score = 315 (47.3 bits), Expect = 0.00039, P = 0.00039 Identities = 401/698 (57%), Positives = 401/698 (57%), Strand = Minus / Plus Query: 2171 TTAGCTCGATATGCAGCAATATCCTTCCAAAGCA-AAGGGAGG-A-TAAA-ACAGTAGG- 2117 TTA C CGATA G A AA A CTT CAAAG A AA GGA A TAAA A G AG Sbjct: 600 TTAAC-CGATA-GAAT-AAGAAGCTTACAAAGTATAAAGGATATACTAAAGAGGGAAGAA 656 Query: 2116 GAAGAAAAA-A-AGATTAAGGAAAGAAATAGAACATGGCA-G--AACTTTATGAAAGAAA 2062 G GAAA A A AGA TAA AAAGAAATAGAA A A G AA TA GAAA A A Sbjct: 657 GCTGAAATAGACAGACTAAAAAAAGAAATAGAAGAAATTAAGGTAAAACTA-GAAA-ACA 714 Query: 2061 TCAAGATTCTAGTTATACCAAAATATCACGTATCTGTAGATCCACAGCAACTCCAGAAAT 2002 T AGA AG TA A AAA A A G A CT A ATC A A AAC C AGAA T Sbjct: 715 TAGAGAGAGAAGCTAAAGAGAAAGAGGATGAA-CTA-A-ATCAATAT-AACAC-AGAATT 769 Query: 2001 AACTAGAACTTCAATAAATGAACATAAAAATACAAGATCATTATAACAATCTATAACTCA 1942 A TAGAA TT AA AAAT AA T AA TA A ATC TTAT A TAA T Sbjct: 770 TAATAGAA-TTAAAGAAATTAAGGTTCAA-TATGATATC-TTATCAGGGGAATTAAGTGT 826 Query: 1941 TG-AAATGGCATAGTCTAATATTTGCAAAGTTATGCCTCATTGAGGT-GCA-ATTATCTA 1885 TG AAAT A A T AA A T C TTA G CT A GA T G A A A A Sbjct: 827 TGTAAATAAAAAAATTGAAGAGAT-CGCT-TTAAGGCTAAAGGATTTTGAAGAAAAGGAA 884 Query: 1884 CCA-GATCCTAACTCTATTAAAACCAGAATGTAGAGACTTTGATTA-AAGGGT-AGACAC 1828 A GAT TAA T A TA A CAGAA TA AGA TT GA A AA G AGA A Sbjct: 885 AAAAGATA-TAA-TAAAATAGAGACAGAAGTTAAAGAATTAGACGAGAACAGAGAGAAAA 942 Query: 1827 TGC-CACCTTCTGAATGCAAAAAAGCACTCTA---CAGGTTTACACTGTCAGA-CCTTAA 1773 T CAC T G A AA AG A TCT CAG T A CT T A A CC AA Sbjct: 943 TCAACACAATAAGTAGTTTTAAGAGTATTCTTGTTCAGATAGATTCTTTAAAATCCCAAA 1002 Query: 1772 TCC-T-TAGTAGGAAATGTGGTCTTAAAAAAAAAAGGTAATTTGTCAATAAACATGCAAT 1715 T T T GTAG AAATG T AA AAA AAAG AA TTG A AAA A A T Sbjct: 1003 TAAATGTGGTAGAAAATGACCTAAAAAGAAAGAAAGAGAAGTTGAAGAGAAAGAAAGAGT 1062 Query: 1714 TAG--GTTAA-GAAACATC-TAGAAATAAACACTTTTCAGAATGACTAAAGCT-GAAAAT 1660 TAG G AA GAAA A TA AA AAA A AGAA GA A AG T GAA A Sbjct: 1063 TAGAAGAGAAAGAAAAACAATACGAAGAAATAGAAAAGAGAAAGAA-AGAGTTAGAAGAG 1121 Query: 1659 TAAGTATTTAATATTTCAATTTACT-GAACTATAAGAGTTATAGATTTCCTTAATCTTAT 1601 AAG A AA A T C A A T GAA A A GA TTA A A T CT AA TAT Sbjct: 1122 AAAGAAA--AACAATACGAAGAAATAGAAA-AGA-GACTTACATACGTGCTAAAAAATAT 1177 Query: 1600 TAATTTACTGGACAGAGCAGCAGACTTGTAATTTAACTTAGT-GATGCTGTGGTTTTTTG 1542 T A AC A A G A AGA G AA TTAACT GT GA C G T T G Sbjct: 1178 TGAAAGACAAAAGAATGAAATAGA---GAAACTTAACTATGTAGACACACAAGATCTA-G 1233 Query: 1541 AGTATCTAAAGGAAAAGAACATAAATGTTTCAGGATATGACTAAGAAAAATAT-AGCCTA 1483 AG AT AAA AA GA TAA TG T AG AT T AC AA A A AT A C TA Sbjct: 1234 AGAATA-AAATCAAG-GATG-TAAGTGAT--AGAAT-TAACCAAATAGACAATGAACTTA 1287 Query: 1482 TATTACTTT 1474 ACTTT Sbjct: 1288 AGGGACTTT 1296 >E09676 cDNA encoding mouse mC26. Length = 5394 Plus Strand HSPs: Score = 316 (47.4 bits), Expect = 0.00040, P = 0.00040 Identities = 198/323 (61%), Positives = 198/323 (61%), Strand = Plus / Plus Query: 2013 TGCTG-TGGATCTACAGATACGTGATATTTT-GGTATAACTAGAATCTTGATTTCTTTCA 2070 T CTG T AT TA AG AC GAT T GG A AA TAGA T T T CTTT A Sbjct: 1216 TACTGCTCTATTTAAAGTCACTAGATTCTGGAGGCAGAATTAGAGTGGTC--TACTTTAA 1273 Query: 2071 -TAAAGTTCTGCCATG-TT-C-TATTTCTTTCCTTAATCTTTTTTTCTTC-CCTA--CTG 2123 TAAA TT T C A TT C TA T T C TA C T T T C CC A CT Sbjct: 1274 ATAAACTTTTTCTAAACTTACATACATACATACATATACATATATACCAAGCCAAGGCTA 1333 Query: 2124 TTTTATCCTCCCTTTGCTTTGGAAGGAT-ATTGCTGCATATCGAGCTAAAGGAA-AGCCT 2181 TTT AT CC T T CT AA A A T CA AT A TAA GA AGC Sbjct: 1334 TTTGATAGACCATGT-CTCAAAAAAAAAGAAAAATACAGATATA--TAATAGATTAGCTA 1390 Query: 2182 GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA-AGGAAGAGGA 2240 ATG AG A A AG GAG G A G GA A A G AGA A AGA AGGAAGA GA Sbjct: 1391 TATG-AGAGAGAGAGAGAGA-GAGAGAGA-GAGAGA-GAGAGAGAGAGAGAGGAAGAAGA 1446 Query: 2241 GGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGA 2300 GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGAAGA GAAGA GA Sbjct: 1447 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 1506 Query: 2301 AGAAGAAGATGATGATGATG-AA-TAAGTTGG 2330 AGAAGAAGA GA GA A G AA T A TTGG Sbjct: 1507 AGAAGAAGAAGAAGAAAAGGGAAATTAATTGG 1538 >D16108 Mouse mC26 gene for GlyCAM-1, exon 1-4. Length = 5394 Plus Strand HSPs: Score = 316 (47.4 bits), Expect = 0.00040, P = 0.00040 Identities = 198/323 (61%), Positives = 198/323 (61%), Strand = Plus / Plus Query: 2013 TGCTG-TGGATCTACAGATACGTGATATTTT-GGTATAACTAGAATCTTGATTTCTTTCA 2070 T CTG T AT TA AG AC GAT T GG A AA TAGA T T T CTTT A Sbjct: 1216 TACTGCTCTATTTAAAGTCACTAGATTCTGGAGGCAGAATTAGAGTGGTC--TACTTTAA 1273 Query: 2071 -TAAAGTTCTGCCATG-TT-C-TATTTCTTTCCTTAATCTTTTTTTCTTC-CCTA--CTG 2123 TAAA TT T C A TT C TA T T C TA C T T T C CC A CT Sbjct: 1274 ATAAACTTTTTCTAAACTTACATACATACATACATATACATATATACCAAGCCAAGGCTA 1333 Query: 2124 TTTTATCCTCCCTTTGCTTTGGAAGGAT-ATTGCTGCATATCGAGCTAAAGGAA-AGCCT 2181 TTT AT CC T T CT AA A A T CA AT A TAA GA AGC Sbjct: 1334 TTTGATAGACCATGT-CTCAAAAAAAAAGAAAAATACAGATATA--TAATAGATTAGCTA 1390 Query: 2182 GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA-AGGAAGAGGA 2240 ATG AG A A AG GAG G A G GA A A G AGA A AGA AGGAAGA GA Sbjct: 1391 TATG-AGAGAGAGAGAGAGA-GAGAGAGA-GAGAGA-GAGAGAGAGAGAGAGGAAGAAGA 1446 Query: 2241 GGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGA 2300 GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAAGAAGA GAAGA GA Sbjct: 1447 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA 1506 Query: 2301 AGAAGAAGATGATGATGATG-AA-TAAGTTGG 2330 AGAAGAAGA GA GA A G AA T A TTGG Sbjct: 1507 AGAAGAAGAAGAAGAAAAGGGAAATTAATTGG 1538 >X64324 R.esculenta mRNA for calsequestrin Length = 2449 Plus Strand HSPs: Score = 314 (47.1 bits), Expect = 0.00042, P = 0.00042 Identities = 210/338 (62%), Positives = 210/338 (62%), Strand = Plus / Plus Query: 2136 TTTGCTTTGGA-A-GGATATTGCTGCATATCGAGCTAAAG-GAAAGC-CTG-ATG-CAGC 2189 TTTG T GGA A GGAT TG G A C CTA AG G A G CTG A G C G Sbjct: 1280 TTTGGAT-GGACATGGATGATGAAGAGGACCTTCCTACAGTGGACGAACTGGAAGACTGG 1338 Query: 2190 AAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAA-GAAAAAGAAGGAAGAGGAGGAAGATG 2248 A AAG GTT T AGG TGAA A CA GAA A GA G A GA GA GA GATG Sbjct: 1339 ATTGAAGAT-GTTCTGGAGGGTGAAGTCAACACTGAAGATGATG-ACGATGATGACGATG 1396 Query: 2249 AGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAG 2308 A GA GATGA GA GA GA GA GA GA GA GATGA GA GA GA GA GA GA GA G Sbjct: 1397 ATGATGATGACGATGACGACGATGACGACGATGATGATGATGACGACGACGATGACGATG 1456 Query: 2309 ATGATGATGATGAATAAGTTGGTT-CTAGCGCAGTTTTTTTTTTCT-TGTCTATAAAG-C 2365 ATGATGATGA GA A G TG T C A G G T T T C TG CTA A AG C Sbjct: 1457 ATGATGATGACGATGATGATGATGACGAT-GATGATGATGATGACGATGACTAAACAGTC 1515 Query: 2366 ATTTA-ACCCCCCTGTACACAACTCACTCCTTTTAAAGAAAAAAAT-TGAAATGTAAGGC 2423 AT A A C T TA CA CT ACT TTT A A A AAAT T AAA G G C Sbjct: 1516 ATCAATAAAGTCGT-TAG-CATCTAACTAGTTT-ATATATTCAAATGTCAAA-GCCTGAC 1571 Query: 2424 TGT-GTAAGATT-TGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTTAA 2473 T T GTAA A T TTTTTA A TG A A T TCTT TT TA A TTAA Sbjct: 1572 TTTAGTAACAACATATTTTTATA-TG-A-A-T-TCTTGATTCTTA-ATTTAA 1617 >AJ000496 Rattus norvegicus mRNA for cyclic nucleotide-gated cation channel Length = 4238 Plus Strand HSPs: Score = 315 (47.3 bits), Expect = 0.00043, P = 0.00043 Identities = 107/155 (69%), Positives = 107/155 (69%), Strand = Plus / Plus Query: 2172 AGGAAAGCCTGATGCAGCAAAA-AAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA 2230 AGGAA G GA G AG AA A AAGG AG A G GA A G AAG AA AGA Sbjct: 1329 AGGAA-GAA-GA-GAAGGAAGAGAAGGAAGAAAAGGAAGAGGAGGAGGGGAAGGAAGAGA 1385 Query: 2231 AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAG 2290 AGGAAGAG AGGAAGA AGGAAGA AAGA GA GAGGAG AGGA GAA A GAAGA G Sbjct: 1386 AGGAAGAGAAGGAAGAGAAGGAAGAAAAAGAAGAGGAGGAGAAGGAAGAAAAAGAAGAGG 1445 Query: 2291 ATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GA A GAAGAA AAGA GA GA GA GA AAG Sbjct: 1446 AGGAGAAGGAAGAAAAAGAAGAGGAGGAAGAGGAAG 1481 Score = 307 (46.1 bits), Expect = 0.00099, P = 0.00099 Identities = 117/157 (74%), Positives = 117/157 (74%), Strand = Plus / Plus Query: 2171 AAGGAA-AGCCTGATGCAGCAAAAAAG-GGAGTTGTCAAGGCTGAAA-A-AAGCAAGAAA 2226 AAGGAA AG GA G AG AA AAG GGAG G AGG G AA A AAG AAGAAA Sbjct: 1226 AAGGAAGAGGAGGAAG-AG-AAGGAAGAGGAGGAGAAGAGGGAGGAAGAGAAG-AAGAAA 1282 Query: 2227 AAGAAGGAAGAGGAGGAAGAT-GAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 AGAAGGAAGAGGAG AAGA GAG A GA GAAGAGGA A G GGAGGA GAAGA GA Sbjct: 1283 GAGAAGGAAGAGGAG-AAGAAAGAGAAGGAAGAAGAGGAGAACGGGGAGGAAGAAGA-GA 1340 Query: 2286 AG-AAGATGAAG-ATGAAGAAGAAGATGATGATGATGAAT-AAG 2326 AG AAGA GAAG A GAA A GAAGA GA GA G GAA AAG Sbjct: 1341 AGGAAGA-GAAGGAAGAAAAGGAAGAGGAGGAGGG-GAAGGAAG 1382 Score = 306 (45.9 bits), Expect = 0.0011, P = 0.0011 Identities = 112/158 (70%), Positives = 112/158 (70%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC-AA 2222 GAGC AGGAA AG ATG AG AAA A G AG G A G GAA AAG AA Sbjct: 1160 GAGCAGCAGGAAGAGGAGAATGAAGAGAAAGAAGAAGAGGAAGAAGA-GAAGGAAGAGAA 1218 Query: 2223 GAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG-AGGAGGAGGAAG 2281 G AA AGAAGGAAGAGGAGGAAGA AGGAAGA GA GAG A GAGG AGGA GAG AAG Sbjct: 1219 GGAAGAGAAGGAAGAGGAGGAAGAGAAGGAAGAGGAGGAGAA-GAGGGAGGAAGAG-AAG 1276 Query: 2282 ATGAAGAAGATG-AAGATGAAGAAGAA-GATGATGATGATGA 2321 A GAA AGA G AAGA GA GAAGAA GA A GA GA GA Sbjct: 1277 AAGAAAGAGAAGGAAGAGGA-GAAGAAAGAGAAGGAAGAAGA 1317 Score = 290 (43.5 bits), Expect = 0.0059, P = 0.0059 Identities = 124/173 (71%), Positives = 124/173 (71%), Strand = Plus / Plus Query: 2155 GCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAA--AAGGGAGTTGTCAAGGCTG 2212 GCTGC A GA T AAG AGC GA G AG A AA AAG GA AAG G Sbjct: 1144 GCTGCC-ACAGAT-TCAAGAGCAGCAGGAAG-AGGAGAATGAAGAGAAAGAAGAAGAG-G 1199 Query: 2213 AAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAG-AGGATGAGGA 2270 AA AA AG AAG AA AGAAGGAAGAG AGGAAGA GAGGAAGA GAAG A GA GAGGA Sbjct: 1200 AAGAAGAG-AAGGAAGAGAAGGAAGAGAAGGAAGAGGAGGAAGA-GAAGGAAGAGGAGGA 1257 Query: 2271 G--GAGG-AGGAAGATGAAGAAGATGAAGATG-AAGAAGAAGATGAT-GATGATGAATAA 2325 G GAGG AGGAAGA GAAGAAGA AGA G AAGA GA GA GA GA A GAA AA Sbjct: 1258 GAAGAGGGAGGAAGA-GAAGAAGAAAGAGAAGGAAGAGGA-GAAGAAAGAGAAGGAAGAA 1315 Query: 2326 G 2326 G Sbjct: 1316 G 1316 Score = 286 (42.9 bits), Expect = 0.0090, P = 0.0090 Identities = 84/113 (74%), Positives = 84/113 (74%), Strand = Plus / Plus Query: 2212 GAAAA-AAGCAAGAAAAAGAAGGAAGAG--GAGGAAGATGAGGAAGATGAAGAGGATGAG 2268 GAA A AAG AAGA AA GAAG AA AG GAGGA GA AGGAAGA AAGA GA GAG Sbjct: 1388 GAAGAGAAGGAAGAGAAGGAAGAAAAAGAAGAGGAGGAGAAGGAAGAAAAAGAAGAGGAG 1447 Query: 2269 GAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 GAG AGGA GAA A GAAGA GA GAAGA GAAGA GA GA GA GA GA GA Sbjct: 1448 GAGAAGGAAGAAAAAGAAGAGGAGGAAGAGGAAGAGGAGGAAGAGGAGGAAGA 1500 Score = 285 (42.8 bits), Expect = 0.010, P = 0.010 Identities = 119/171 (69%), Positives = 119/171 (69%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAA-AAGGGAGTTGTCAAGGCTGAAAAAAGCA-AGAAAAA 2228 A GG AAG GA G AG AA A AAGG AG G AAGG GAAAAA G A AG A A Sbjct: 1371 AGGGGAAGGAAGA-GAAGGAAGAGAAGGAAGA-G--AAGGAAGAAAAA-GAAGAGGAGGA 1425 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGA--AG-ATGAAGAGGATGAGGAGGAGGAGGAAGATGA 2285 GAAGGAAGA A GAAGA GAGGA AG A GAA A GA GAGGAGGA GAGGAAGA GA Sbjct: 1426 GAAGGAAGAAAAAGAAGAGGAGGAGAAGGAAGAAAAAGAAGAGGAGGAAGAGGAAGAGGA 1485 Query: 2286 AGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTC-TAGCGCAG 2341 GAAGA GA GA GA GA G AT T TG TG ATA G TG TT T G GCAG Sbjct: 1486 GGAAGAGGAGGAAGAGGA-GCCTATTGTCCTGCTGGATA-GCTGTTTGGTGGTGCAG 1540 Score = 272 (40.8 bits), Expect = 0.040, P = 0.039 Identities = 114/163 (69%), Positives = 114/163 (69%), Strand = Plus / Plus Query: 2165 GAGC-TAAAG-GAAAGCCTGATGCAGCAAAAAAGGGAGTT-GTCAAGGCTGAAAA--AAG 2219 GAG T AAG GAAAG GA G AG AA AA G AG G AAGG GA AA AAG Sbjct: 1175 GAGAATGAAGAGAAAGAA-GAAG-AGGAAGAAGAGAAGGAAGAGAAGGAAGAGAAGGAAG 1232 Query: 2220 CA-AGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGG 2278 AG AA AGAAGGAAGAGGAGGA GA GAGG AG GAAGAG A AG A GAG AGG Sbjct: 1233 AGGAGGAAGAGAAGGAAGAGGAGGA-GAAGAGGGAG--GAAGAGAAGAAGAAAGAGAAGG 1289 Query: 2279 AAGATGAAGAAGATGAAGATG-AAGAAGAAGATGATGATGATGAATAAG 2326 AAGA GA GAAGA AGA G AAGAAGA GA A G GA GAA AAG Sbjct: 1290 AAGAGGA-GAAGAAAGAGAAGGAAGAAGAGGAGAACGGGGAGGAAGAAG 1337 Score = 270 (40.5 bits), Expect = 0.049, P = 0.048 Identities = 100/136 (73%), Positives = 100/136 (73%), Strand = Plus / Plus Query: 2186 CAGCAAAAAAGGGAGTTG-TCAAGGCTGAAAAAAGCAAGAAAAAGAAG-GAAG-AGGAGG 2242 CAGC A A A G T G TC AGG G A AG AAGAA AAGA G GAAG AGGA G Sbjct: 1574 CAGCCAGAGACAGCATCGATCCAGGA-GTTACCAG-AAGAAGAAGAGGAGAAGGAGGAAG 1631 Query: 2243 AAGATGA-GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG-AAGATGAAGATGA 2300 A GA GA GGA GA GAAGAGGA AGGAGGAGGAGGAAGA GAAG AAGA GAAGA GA Sbjct: 1632 A-GAAGAAGGAGGAGGAAGAGGAGAAGGAGGAGGAGGAAGA-GAAGGAAGAGGAAGAGGA 1689 Query: 2301 AGAAGAAG-ATGATGATGATG 2320 GAAG AG A GA G GA G Sbjct: 1690 -GAAGGAGGAGGAGGGGGAGG 1709 >D00319 Cowpox virus A-type inclusion protein gene and flanks. Length = 4644 Plus Strand HSPs: Score = 315 (47.3 bits), Expect = 0.00043, P = 0.00043 Identities = 101/139 (72%), Positives = 101/139 (72%), Strand = Plus / Plus Query: 2183 ATGCAGCAAAAAAGGGAGTTG-TCAAGGCTGAAAAAAGCAAGAAAAAGAAG-GAAGAGGA 2240 ATGCA C A A GGA T TCAAG G AAAA AA A A GAAG GAAGA GA Sbjct: 3 ATGCAACTGATACAGGACATCATCAAGATAGCAAAAT--AA-ATATCGAAGTGAAGATGA 59 Query: 2241 GGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGA 2300 GA GATGA GA GATGA GA GATGA GA GA GA GA GATGA GA GATGA GATGA Sbjct: 60 TGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGA 119 Query: 2301 AGAAGAAGATGATGATGATGA 2321 GA GA GATGATGATGATGA Sbjct: 120 TGATGATGATGATGATGATGA 140 Score = 313 (47.0 bits), Expect = 0.00053, P = 0.00053 Identities = 99/139 (71%), Positives = 99/139 (71%), Strand = Plus / Plus Query: 2211 TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 T AA A AGCAA A AAA A GAAG G AG A GATGA GA GATGA GA GATGA GA Sbjct: 25 TCAAGATAGCAAAATAAATATCGAAGTGAAG-ATGATGATGATGATGATGATGATGATGA 83 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330 GA GA GA GATGA GA GATGA GATGA GA GA GATGATGATGATGA A G TG Sbjct: 84 TGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATG- 142 Query: 2331 TTCTAG-CGCAGTTTTTTTT 2349 T TAG CG G T TT T Sbjct: 143 TCATAGACGATGATGATTAT 162 >M18978 T.brucei kinetoplast maxicircle DNA, variable region R3-D3. Length = 1335 Plus Strand HSPs: Score = 311 (46.7 bits), Expect = 0.00044, P = 0.00044 Identities = 501/883 (56%), Positives = 501/883 (56%), Strand = Plus / Plus Query: 1297 AATAAATTA-GGGTTTTTTTGACTAAAATGTAATCAGACTCAG-ACAAAGGCTGTGTACA 1354 A T A TTA GGGT TTT TGA T AAATGTAATCAG T AG ACAAA T T T A Sbjct: 297 AGTTATTTATGGGTGTTTGTGATTTAAATGTAATCAGTTT-AGTACAAATCATTTTTCTA 355 Query: 1355 T-TTATGTTG-GTTTTGTTATTCCCCAGTATCTTGAAGTTCA-TGAAAATGTTGGTAGTC 1411 TTAT TTG GTTTTG ATT AG T TTGAA TT A T AAAT TT GT TC Sbjct: 356 AATTATTTTGAGTTTTGGGATTTGG-AGG-T-TTGAACTTGAATTTAAAT-TTAGTT-TC 410 Query: 1412 ACTTCAAGTCAAA-AATGAGCATTTTCAAATGGCTTGGC-ATACAGTACAAAA-ACAGG- 1467 A TCAAGTC A AA A CAT CA T T GC ATA AGT A A A Sbjct: 411 AAGTCAAGTCGTATAAAAAACATGG-CATTTTTTGTTGCTATA-AGTTTTTTATATAACT 468 Query: 1468 CTA-GA--C-AAAGTAA-TATAGGCT-ATATTTTTCTTAGTCATATCCTGAAACATTTAT 1521 CT GA C AAA TAA T TA T A TTTT TA T TA T AAC T A Sbjct: 469 CTTTGATTCGAAATTAAATTTAAATTTAGGTTTTAGCTATTT-TAAATTCCAACTTGAAA 527 Query: 1522 GTTCTTTTCC-TTTAGATACTCAAAAAACCACAGCATCACTAAGTT-AAATTACAAGTCT 1579 TT TTTT TTT ATA T A A A AT TAA T AAATT AA T Sbjct: 528 TTTGTTTTGGGTTTTTATAATTGAGTTTT-A-A--ATTT-TAAATCCAAATTTAAA-TAG 581 Query: 1580 GCTGCTCTGTCCAGTAAATTAATAAGATTAAGGAAATCTATAACTCTTATAGTTCAGTAA 1639 G T TCT T C TAA T AA AA ATT AAATCT T C ATA TT A T Sbjct: 582 GATCTTCTTTAC--TAA-TGAA-AATATTTTACAAATCTTTTGCAAAAATATTTTAATTT 637 Query: 1640 ATTGAA-ATATTAAATACTT-AATTTTCAGCTTTAGTCATTCTGAAAAGTGTTTATTT-C 1696 A T A AT T TA TT AA TTTC G TTTA T TT T AAA T TTTATT C Sbjct: 638 AGTAAGGATGGTTGGTATTTTAAATTTCGG-TTTAATT-TT-TAAAATTTTTTTATTGAC 694 Query: 1697 TAGATGTTTCTTAACCTAATTGC--ATGTTTATTGACAAA--TTACCTTTTTTTTTTAAG 1752 A A TTT T AA T A TG AT TAT GAC TT TTT TTTTA Sbjct: 695 CAAACATTT-TCAAGGTTAGTGGGAATAGCTAT-GACTTTGGTTTAGATTTAGTTTTATC 752 Query: 1753 ACCACATT-TCCTACTAAGGATTAA-GGTCTGACAGTGTAAACCTGTAGAGTGCTTTTTT 1810 A ATT T T AAGGATT GGT ACA T T TGTA GTG TTT TT Sbjct: 753 ATTGAATTGTTATGTAAAGGATTTGTGGTTATACAATATGTTTATGTAT-GTG-TTTATT 810 Query: 1811 GCATTCAGAAGGTGGCAGTGTCTACCCTTTAAT-CAAAGTCTCTACATTCTGGTT-TTAA 1868 AT A G T AG CTA CTT AAT CAAA CTC A TTC TT A Sbjct: 811 ATATGTACTCGATTAGAGAAGCTAAACTTAAATTCAAAC-CTCCAATTTCCAAAACTTGA 869 Query: 1869 TAGAGTT---AGG--ATCTGGTAGATAATTGCACCTCAATGAGGCATAACTTTGCAAATA 1923 A A TT AGG AT T TA A AATTG A T AA A AT A T T AAAT Sbjct: 870 AACAATTTTTAGGTGATTTATTA-AGAATTG-ATTTAAA--ATT-ATGAATGTATAAATT 924 Query: 1924 TTAG-ACTATGCCATTTCATG-AGTTATAGATTGTTATAATG-ATCTTGTATT-TTTATG 1979 TT G A TA G TTT TG A T AT TT TA A TG A CT T T TTTA Sbjct: 925 TTGGTAGTAGGTTTTTTT-TGTAATAATGTGTTTATAAATTGTAACTAATCTGGTTTAAA 983 Query: 1980 TTCATTTAT-TGAAGT--TCTAG-TTATTTCTGGAGTTGCTGTGGATCTACAGAT-ACGT 2034 T ATTT T T AA T T TAG TT TTT TGG G TG G T TA A T A T Sbjct: 984 CT-ATTTTTCTAAATTATTTTAGGTTTTTTTTGG-GACA-TGAGAGTTTAAATTTGAATT 1040 Query: 2035 GATATTTTGGT-ATAACTAGAAT-CTTGATTTCTTTCATAA-AGTTCTGCCATGTTCTAT 2091 A TTT GT AT A TA AA C TG TTT T T TA A T AT TCT T Sbjct: 1041 TACTTTTAAGTTATCAATAAAAAACATGTTTTTTGTGCTATTAAAATTTATATAATCT-T 1099 Query: 2092 TTCTTTCCTTAATCTTTTTTTCTTCCCTACTGTT-TTATCCTCCCTTTGCTTTGGAAGGA 2150 TT T C T AA TT TT TA T T TT C TTTG TTT A A Sbjct: 1100 TT-TGACGTCAAATTTAAATTTAGGTTTATTCTAATTCGAAACTTTTTGGTTTTTTAATA 1158 Query: 2151 TATTGCTGCATATCGAGCTAAA 2172 AT CT CA AT A CTAAA Sbjct: 1159 AATAACTCCA-ATAAATCTAAA 1179 >AL009007 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from contig Length = 7213 Plus Strand HSPs: Score = 315 (47.3 bits), Expect = 0.00045, P = 0.00045 Identities = 117/165 (70%), Positives = 117/165 (70%), Strand = Plus / Plus Query: 2167 GCTAAAG-GAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAA--AAGCAAG 2223 G TAAAG G AAG TGAT G AAA A G AG TG CAA G T A A AAG A G Sbjct: 2605 GATAAAGAGGAAGA-TGATAATGATAAAGATGAAGATGACAATGATAAGGATGAAG-ATG 2662 Query: 2224 AAAAAGA-A-GGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 A AA GA A GGA GA GA GAA ATGA A GATGAAGA GAT A GA AGGAGGAAG Sbjct: 2663 ATAATGATAAGGAGGAAGATGAAAATGATAAGGATGAAGATGATAATGATAAGGAGGAAG 2722 Query: 2282 ATGAAGAAGATGAAGATGAAGA-A--GAAGATGATGATGATGAATAAG 2326 ATGAA A GAT A GATGAAGA A GAAGAT ATGA ATGA TAAG Sbjct: 2723 ATGAAAATGATAAGGATGAAGATAATGAAGATAATGAAAATGA-TAAG 2769 Score = 305 (45.8 bits), Expect = 0.0013, P = 0.0013 Identities = 117/172 (68%), Positives = 117/172 (68%), Strand = Plus / Plus Query: 2167 GCTAAAG-GAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAA--AAGCAAG 2223 G TAAAG G AAG TGAT G AAA A G AG TG CAA G T A A AAG A G Sbjct: 2605 GATAAAGAGGAAGA-TGATAATGATAAAGATGAAGATGACAATGATAAGGATGAAG-ATG 2662 Query: 2224 AAAAAGA-A-GGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 A AA GA A GGA GA GA GAA ATGA A GATGAAGA GAT A GA AGGAGGAAG Sbjct: 2663 ATAATGATAAGGAGGAAGATGAAAATGATAAGGATGAAGATGATAATGATAAGGAGGAAG 2722 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAG 2336 ATGAA A GAT A GATGAAGA A GA GAT ATGA AAT A GG T AG Sbjct: 2723 ATGAAAATGATAAGGATGAAGATAATGAAGATAATGAA-AATGATAAGGATGAAG 2776 Score = 288 (43.2 bits), Expect = 0.0077, P = 0.0077 Identities = 120/183 (65%), Positives = 120/183 (65%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAG-GAAAGCCTGATGCAGCAAAAAAGGGAGTTGT 2204 AAGGAT G TG ATA GA TAA G G AAG TGA G AA A G AG TG Sbjct: 2650 AAGGATGAAGATG-ATAATGA--TAAGGAGGAAGA-TGAAAATGATAAGGATGAAGATGA 2705 Query: 2205 CAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 AA G T AA AG AAGA AA AA GA AGGA GAAGAT A GAAGAT A GA A Sbjct: 2706 TAATGAT--AAGGAGGAAGATGAA-AATGATAAGGATGAAGATAATGAAGATAATGAAAA 2762 Query: 2265 TGAGGAGGAGGAGGAAGATGAAGAA-GATGAAGATGAAGAAGAAGATGATGATGATGAAT 2323 TGA AGGA GA GA GAT AAG A GA GA GAT A GA GAAGATGAT A GATGAA Sbjct: 2763 TGATAAGGATGAAGATGATNAAGGATGAAGATGATAAGGATGAAGATGATAAGGATGAAG 2822 Query: 2324 AAGTT 2328 A G T Sbjct: 2823 ATGAT 2827 Score = 286 (42.9 bits), Expect = 0.0095, P = 0.0095 Identities = 100/142 (70%), Positives = 100/142 (70%), Strand = Plus / Plus Query: 2192 AAAAGGGAGTTGTCAAGGCTGAAAAAAGC-AA-GAAAAAGAAGGAAGAGGAGGAA-GAT- 2247 AAAAGG A T T AA G AAAAAAG AA GAAAAAGAAG A GAG AGGAA GAT Sbjct: 2550 AAAAGGAAATAATAAAAGTAAAAAAAAGATAAAGAAAAAGAAGAATGAG-AGGAATGATA 2608 Query: 2248 --GAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAG 2305 GAGGAAGATGA A GAT A GA GA GA GA ATGA A GATGAAGATGA A G Sbjct: 2609 AAGAGGAAGATGATAATGATAAAGATGAAGATGACAATGATAAGGATGAAGATGATAATG 2668 Query: 2306 AAGATGATGATGATGAATAAGTT 2328 A A GA GA GATGAA A G T Sbjct: 2669 ATAAGGAGGAAGATGAAAATGAT 2691 Score = 280 (42.0 bits), Expect = 0.018, P = 0.018 Identities = 124/182 (68%), Positives = 124/182 (68%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGA-AAGCCTGATGCAGCAAAAA-AGGGAGTT 2202 GAAG ATA TG G ATA GA AAA GA AAG TGA G G AA A G AG T Sbjct: 2740 GAAG-ATAATGAAG-ATAATGA---AAATGATAAGGATGAAGATGATNAAGGATGAAGAT 2794 Query: 2203 GTCAAGGCTGAAAAAAGCAAGAAA-AAGAAGGAAGAGGAG-GAAGATGAGGAAGATGAAG 2260 G AAGG TGAA A AAG A AAGA G A AGGA GAAGATGA A GATGAAG Sbjct: 2795 GATAAGGATGAAGATGATAAGGATGAAGATGATA-AGGANTGAAGATGATAAGGATGAAG 2853 Query: 2261 AGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATG 2320 A GAT AGGA GA AG A GAT AAG GATGAAGATGA GAAGA GAT ATGAT A G Sbjct: 2854 ATGATAAGGATGA--AG-ATGAT-AAG--GATGAAGATGATGAAGATGATAATGATAAGG 2907 Query: 2321 AATAAG 2326 A AAG Sbjct: 2908 ACGAAG 2913 Score = 266 (39.9 bits), Expect = 0.078, P = 0.075 Identities = 106/162 (65%), Positives = 106/162 (65%), Strand = Plus / Plus Query: 2171 AAGGAAAGCC-TGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAG 2229 AA GA AG TGAT AG AA A G TG AA G TGAA A CAA A AAG Sbjct: 2593 AATGAGAGGAATGATAAAGAGGAAGATGATAATGATAAAGATGAAGATGACAATGATAAG 2652 Query: 2230 AAGGAAGAGGAGGAAGAT--G-AGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 A GAAGA GA A GAT G AGGAAGATGAA A GAT AGGA GA GA GA ATGA Sbjct: 2653 GATGAAGATGATAATGATAAGGAGGAAGATGAAAATGATAAGGATGAAGATGATAATGAT 2712 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT-AAGTT 2328 A GA GAAGATGAA A GA A GATGA GAT AAT AAG T Sbjct: 2713 AAGGAGGAAGATGAAAATGATAAGGATGAAGAT-AATGAAGAT 2754 Score = 264 (39.6 bits), Expect = 0.096, P = 0.092 Identities = 116/186 (62%), Positives = 116/186 (62%), Strand = Plus / Plus Query: 2147 AGGATATTGCTGCAT-ATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGT-TGT 2204 AGGA TG T AT AT AG T AAG A TGAT AG A AA GA TG Sbjct: 2612 AGGAAGATGATA-ATGATAAAGATGAAGATGACAATGATA-AGGATGAAGATGATAATGA 2669 Query: 2205 CAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 AAGG GAA A AA A AAG A GAAGA GA A GAT AGGA GA GA GA A Sbjct: 2670 TAAGGAGGAAGATGAAAATGATAAGGATGAAGATGATAATGATAAGGAGGAAGATGAAAA 2729 Query: 2265 TGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAAT- 2323 TGA AGGA GA GA ATGAAGA ATGAA ATGA A GA GA GATGAT A G AT Sbjct: 2730 TGATAAGGATGAAGATAATGAAGATAATGAAAATGATAAGGATGAAGATGATNAAGGATG 2789 Query: 2324 AAGTTGGT 2331 AAG TG T Sbjct: 2790 AAGATGAT 2797 Score = 254 (38.1 bits), Expect = 0.28, P = 0.24 Identities = 88/123 (71%), Positives = 88/123 (71%), Strand = Plus / Plus Query: 2214 AAAAAGCAAGAAA-A-AG-AAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270 AAAAAG AAGAA A AG AA GA A GAGGAAGATGA A GAT AAGA GA GA GA Sbjct: 2584 AAAAAG-AAGAATGAGAGGAATGATAAAGAGGAAGATGATAATGATAAAGATGAAGATGA 2642 Query: 2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA--AT-AAGT 2327 A GA A GATGAAGA GAT A GAT A GA GAAGATGA ATGAT A AT AAG Sbjct: 2643 CAATGATAAGGATGAAGATGATAATGATAAGGAGGAAGATGAAAATGATAAGGATGAAGA 2702 Query: 2328 TGGT 2331 TG T Sbjct: 2703 TGAT 2706 Score = 251 (37.7 bits), Expect = 0.38, P = 0.31 Identities = 129/207 (62%), Positives = 129/207 (62%), Strand = Plus / Plus Query: 2146 AAGGATATTGCTGCATATCGAGCTAAAGGA-AAGC-CTGATGCAGCAAAAAAGGGAGTTG 2203 AAGGAT G TG ATA GA A A GA AAG TGA G G AA A G AG TG Sbjct: 2798 AAGGATGAAGATG-ATAAGGATGAAGATGATAAGGANTGAAGATGATAAGGATGAAGATG 2856 Query: 2204 TCAAGGCTGAA-A--A-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAA 2259 AAGG TGAA A A AAG A GAA A GA G AAGA GA A GAT AGGA GA GA Sbjct: 2857 ATAAGGATGAAGATGATAAGGATGAAGATGATG-AAGATGATAATGATAAGGACGAAGAC 2915 Query: 2260 GAGGATGAGGAGGAGGAGGAAGATGAAGA--A-GATGAAGATGAAGAAGAAGATGATGAT 2316 GA ATGA A GAGGA GA GAT A GA A GAT A GAT GAAGAA ATGA A Sbjct: 2916 GATAATGATAAAGAGGAAGATGATAACGATAACGATAACGATATCGAAGAAAATGACAAN 2975 Query: 2317 GA-TG-AATAAGTTGGTTCTAGCGCAGTT 2343 A TG AA A TG TT TAG G AG T Sbjct: 2976 TACTGNAAGATAGTGATTATAGAGAAGAT 3004 Score = 247 (37.1 bits), Expect = 0.57, P = 0.44 Identities = 113/166 (68%), Positives = 113/166 (68%), Strand = Plus / Plus Query: 2170 AAAGGA-AAGCCTGATGCAGCAA---AAAAGGGA-GTTGTC-A-AGGC-TGAAAAAAGCA 2221 AAAGGA AAG GATG A A AAAAGGGA G G C A A G T AAAA G A Sbjct: 2499 AAAGGAGAAGGA-GATGAAAAATGGTAAAAGGGATGAAGACGACACGAATCGAAAAGGAA 2557 Query: 2222 AGAA-AAA-GAAGGAAGAGGAGGAAGATGAGGAAGA-TGAAGAGGATGAGGAGGAGGAGG 2278 A AA AAA G A AA A GA AAGA A GAAGA TGA GAGGA A GA A GAGG Sbjct: 2558 ATAATAAAAGTAAAAAAAAGATAAAGAAAAAGAAGAATGA-GAGGA--ATGATAAAGAGG 2614 Query: 2279 AAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTT 2328 AAGATGA A GAT AAGATGAAGA GA ATGAT A GATGAA A G T Sbjct: 2615 AAGATGATAATGATAAAGATGAAGATGACAATGATAAGGATGAAGATGAT 2664 >M60858;J05584 Human nucleolin gene, complete cds. Length = 10,942 Plus Strand HSPs: Score = 315 (47.3 bits), Expect = 0.00047, P = 0.00047 Identities = 187/292 (64%), Positives = 187/292 (64%), Strand = Plus / Plus Query: 2047 TAACTAGAATCTTGATTT-CTTT-CATAA-AGTTCTG--CC-ATGTTCTATTTCTTTCCT 2100 T AC AG AT T GATTT CTTT CAT A A TT CC ATGTT TTT T Sbjct: 4498 TGAC-AGGAT-TCGATTTTCTTTACATTAGATTTGAAAACCGATGTTGGTTTTGGGAGAT 4555 Query: 2101 TAAT-CTTTTTTTCT-TCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGGATATTGCTG 2158 T T C TTTTT T CT CT TTT A CTC T G GAAG TAT G Sbjct: 4556 TGCTGCAATTTTTAGGTGACTTCTCTTTCAGACTC---T-GAAGAAGAAGC-TATGGAGA 4610 Query: 2159 CATAT-CGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA 2217 C TA C AGC AAAGGAAAG A GC GCAAAA G TGT AA GC A AA Sbjct: 4611 C-TACACCAGCCAAAGGAAAGAA--A-GCTGCAAAAGTTGTTCCTGTGAAAGCCAAGAAC 4666 Query: 2218 A-GCAAGAAAAAGAAG--GAAGAGGAGGAAGATGAGGA--AG-ATGAAGAGGATGAGGAG 2271 G GA A GAAG GAAGA GAGGA GATGAGGA AG ATGA GA GA GA GA Sbjct: 4667 GTGGCTGAGGATGAAGATGAAGAAGAGGATGATGAGGACGAGGATGACGACGACGACGAA 4726 Query: 2272 GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 GA GA GAAGATGA GA GATGAAGATGA GA GA GA GA GA GA GA A G GGT Sbjct: 4727 GATGATGAAGATGATGATGATGAAGATGATGAGGAGGAGGAAGAAGAGGAGGAGGAAGGT 4786 Query: 2332 TCT 2334 CT Sbjct: 4787 ACT 4789 Score = 280 (42.0 bits), Expect = 0.018, P = 0.018 Identities = 104/147 (70%), Positives = 104/147 (70%), Strand = Plus / Plus Query: 2203 GTCAAGGCTGAAAA-AA-G-CAAGAAA---AAGAAGGAAGAGGAG-GAAGATGAGGAAGA 2255 G CAAGG G AAA AA G CAAGAA AAGAAGGAAGA AG GA GA GAGGA GA Sbjct: 3694 GCCAAGGGGGCAAAGAATGGCAAGAATGCCAAGAAGGAAGAC-AGTGATGAAGAGGAGGA 3752 Query: 2256 TGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 TGA GA TGAGGAGGA GAGGA GATGA GA GA GA GATGA GA GAAGATGA Sbjct: 3753 TGATGACAGTGAGGAGGATGAGGAGGATGACGAGGACGAGGATGAGGATGAAGATGAAAT 3812 Query: 2316 TGATGAATAAGTTGGTTCTAGC-GCAGTT 2343 TGA A AG G T AGC GCAG T Sbjct: 3813 TGAACCAGCAGC-GATGAAAGCAGCAGCT 3840 Score = 265 (39.8 bits), Expect = 0.089, P = 0.085 Identities = 121/176 (68%), Positives = 121/176 (68%), Strand = Plus / Plus Query: 2152 ATTGCT-GCATATCGAGCTAAAGGAAAGC-CTG--ATGC-AGCAAAAAAGGGA--GT-TG 2203 ATTG T GCA TC G TAA G A G CTG AT C AGC AA GG A G TG Sbjct: 3654 ATTGGTAGCAACTCCTGGTAA-GAAGGGTGCTGCCATCCCAGCCAAGGGGGCAAAGAATG 3712 Query: 2204 TCAAGGCTGAAAA-AAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGA--G-GA--AG-AT 2256 CAAG TG AA AAG AAGA A GA G AAGAGGAGGA GATGA G GA AG AT Sbjct: 3713 GCAAGAATGCCAAGAAGGAAGACAGTGATG-AAGAGGAGGATGATGACAGTGAGGAGGAT 3771 Query: 2257 GAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 GA GAGGATGA GAGGA GAGGA GA GA GAAGATGAA TGAA AG AG GATGA Sbjct: 3772 GAGGAGGATGACGAGGACGAGGATGAGGATGAAGATGAAATTGAACCAGCAGC-GATGA 3829 Score = 255 (38.3 bits), Expect = 0.25, P = 0.22 Identities = 121/183 (66%), Positives = 121/183 (66%), Strand = Plus / Plus Query: 2259 AGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGA 2318 AGAGGATGAGGA GA GAGGA GA GAAGA GATGA GATGA GA GA GATGA GA GA Sbjct: 3855 AGAGGATGAGGACGATGAGGATGACGAAGATGATGAGGATGACGATGACGATGAGGAAGA 3914 Query: 2319 TGAATAAGTTGGT-TCTAGCGCAGTTTTTTTT-TTCTTGTCTATAAAGCAT-TTAACCCC 2375 TG TAAG G T TCT G G AGTT T TTCT T TA AA G AT TT A Sbjct: 3915 TGG-TAAGGAGTTGTCTTG-GTAGTTACTGGGCTTCTGAT-TACAAGGTATCTTGAGATT 3971 Query: 2376 CCTGTA-CACA-ACTCACTCCTTTTA-AAGAAAAAAATTGAAATGTA-AGGCTGTGTAAG 2431 C G A CACA A TC TC T TA AA A AT GA AT TA A CT TGT G Sbjct: 3972 CTGGGATCACATATTCCTTCATCGTACAACCTGGAGAT-GAGAT-TAGAATCT-TGTGGG 4028 Query: 2432 ATTTGTTTT 2440 A TT T TT Sbjct: 4029 AATTCTCTT 4037 Score = 222 (33.3 bits), Expect = 8.1, P = 1.0 Identities = 118/176 (67%), Positives = 118/176 (67%), Strand = Plus / Plus Query: 2143 TGG-AAGGATATTGCTGCATATCG-AGCTAAAGG---AAAGCCTG--ATGCA-GCAAAAA 2194 TGG AAG A TGCTGC ATC AGC AA GG AAAG TG A G A GC AA A Sbjct: 3669 TGGTAAGAAGGGTGCTGCC-ATCCCAGCCAAGGGGGCAAAGAATGGCAAGAATGCCAAGA 3727 Query: 2195 AGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGA-AG-GAAGAGGAGGAAGATGAGGA 2252 AGG AG CA G TGAA A G A GA A GA AG GA GAGGA GA GA GA GA Sbjct: 3728 AGGAAGA---CAGTGATGAAGAG-G-AGGATGATGACAGTGAGGAGGATGAGGAGGATGA 3782 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAA-GAAGAAGATG 2311 GA GA GAGGATGAGGA GA GA GAA TGAA AG G GATGAA G AG AG TG Sbjct: 3783 CGAGGACGAGGATGAGGATGAAGATGAAATTGAACCAGCAGC-GATGAAAGCAGCAGCTG 3841 Query: 2312 ATG 2314 TG Sbjct: 3842 CTG 3844 >M92988 Mouse calregulin (ERp60) mRNA, complete cds. Length = 1873 Plus Strand HSPs: Score = 312 (46.8 bits), Expect = 0.00048, P = 0.00048 Identities = 134/190 (70%), Positives = 134/190 (70%), Strand = Plus / Plus Query: 2141 TTTGG-AAGGATAT-TGCTGCAT-ATCGAG-CTAAAGGAAAGCCTGATGCAGCAAAAA-A 2195 TTTGG AA GA A TG G T A C AG CT AG AAGC GATG AG A AA A Sbjct: 1092 TTTGGCAATGAGACGTGGGGTGTTACCAAGGCTGCAGAGAAGCA-GATGAAGGACAAGCA 1150 Query: 2196 GG--GAGTTGTCA-AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGA 2252 GG GAG G CA AGGCT AA AAG AAGAA A GA AAGA G G AA A GAGGA Sbjct: 1151 GGATGAGGAG-CAGAGGCTTAAGGAAG-AAGAAGAGGAC--AAGAAGCGTAA-A-GAGGA 1204 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGA-AGAAGATGAAGATGAAGAAGAAGATG 2311 AGA GAAG GA GA A GAGGA GA GATGA AGA GATGAAGATGA GA GAAGA G Sbjct: 1205 AGAAGAAGCTGAGGATAAAGAGGATGATGATGACAGA-GATGAAGATGAGGATGAAGAAG 1263 Query: 2312 ATGATGATGAATAAGTTG 2329 ATGA A GA AAG TG Sbjct: 1264 ATGAGAAGGAGGAAGATG 1281 Score = 256 (38.4 bits), Expect = 0.18, P = 0.17 Identities = 112/167 (67%), Positives = 112/167 (67%), Strand = Plus / Plus Query: 2155 GCTGCATATC-G-AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGC 2210 GCTGCA A G AG T AAGGA AAGC GATG AG A A AGG G A A G Sbjct: 1122 GCTGCAGAGAAGCAGATGAAGGACAAGCAGGATG-AGGAGCAGAGGCTTAAGGAAGAAGA 1180 Query: 2211 TGAAAA-AAGCAAGAA-AAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAG 2268 GA A AAG AAG AAAGA GGAAGA GA G GA GA AAGA GA GA GATGA Sbjct: 1181 AGAGGACAAG-AAGCGTAAAGA-GGAAGAAGAAGCTGAGGATAAAGAGGATGATGATGAC 1238 Query: 2269 -GAG--GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGA 2315 GAG GA GA GA GATGAAGAAGATGA A GA GAAGA GA GA GA Sbjct: 1239 AGAGATGAAGATGAGGATGAAGAAGATGAGAAGGAGGAAGATGAGGAAGA 1288 Score = 231 (34.7 bits), Expect = 2.6, P = 0.92 Identities = 123/184 (66%), Positives = 123/184 (66%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGA--AAGCCTGATGCAGCAAAAAAGGGAGTT 2202 GAAGGA A GC G AT GAGC A AGG AAG GA G AG A AAG AG Sbjct: 1139 GAAGGACAA-GCAGGATGAGGAGC-AGAGGCTTAAGGAAGAAGAAGAGGACAAGA-AGC- 1194 Query: 2203 GTCAAGGCTGAA-AA-AAGCA-AGAA-AAAGAAGGAAGAGGAGGA-AGATGAGGAAGATG 2257 GT AAG GAA AA AAGC AG A AAAGA GGA GA GA GA AGA GA GAAGATG Sbjct: 1195 GTAAAGAG-GAAGAAGAAGCTGAGGATAAAGA-GGATGATGATGACAGA-GATGAAGATG 1251 Query: 2258 AAGAGGATGAGGA-G-GA-GGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG 2314 A GA GA GA GA G GA GGAGGAAGATGA GAAGA TG AAG A GATG Sbjct: 1252 AGGATGAAGAAGATGAGAAGGAGGAAGATGAGGAAGAATCCCCTGGCCAAGCCAAGGATG 1311 Query: 2315 ATGATGAATAAG 2326 A G TG A A G Sbjct: 1312 A-GCTGTAGAGG 1322 >U48809 Rattus norvegicus neural zinc finger factor-1 (NZF-1) mRNA, Length = 4511 Plus Strand HSPs: Score = 314 (47.1 bits), Expect = 0.00048, P = 0.00048 Identities = 112/162 (69%), Positives = 112/162 (69%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTT-GTCAAGGCTGAAAAAAGCAAG 2223 GAGC AA GG A G TGATG G A A AGG G T G AAG C GA A G AG Sbjct: 1149 GAGC-AAGGGGATGA-TGATGATGAAGATGAGGTGGATCGGGAAGAC-GAGGAG-G--AG 1202 Query: 2224 AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGAT 2283 A AG AGGAAGA GA GAAGATGA GAAGATGA GA GATG GA GA G GAAGA Sbjct: 1203 ATTGAGGAGGAAGATGATGAAGATGATGAAGATGATGATGATGGTGATGATGTAGAAGAG 1262 Query: 2284 GAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GAAGAAGATGA GATGA GAAGA GA GA GA GA GAA A G Sbjct: 1263 GAAGAAGATGATGATGATGAAGAGGAGGAAGAAGAGGAAGAGG 1305 Score = 308 (46.2 bits), Expect = 0.00090, P = 0.00090 Identities = 128/193 (66%), Positives = 128/193 (66%), Strand = Plus / Plus Query: 2138 TGCTTTGGAAG-GATATTGCTGCATA--TCGA-GCTAAAGGAA-AGCCTGATGCAGCAAA 2192 TGCT TG AG GAT CTG A A T GA G TAA GGAA AG TGATG G A Sbjct: 1071 TGCTATGAGAGTGATGGCACTGAAGACATGGATGATAA-GGAAGAGGATGATGATGAGGA 1129 Query: 2193 AAAGGGAGTTGTCAAGGCTGAAAAAAGCAA-GAAAAAGAAGGAAGAGGAGGAAGATGAGG 2251 G G CAA G TGA AA G A GA A GA G AAGA GAGG GAT GG Sbjct: 1130 GTTCTCTGAAGACAATGATGAGCAAGGGGATGATGATGATG-AAGATGAGGTGGATCGGG 1188 Query: 2252 AAGATGAAGAGGATGAG-GAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGAT 2310 AAGA GA GAGGA GA GAGGAGGA GA GATGAAGA GATGAAGATGA GA GA G T Sbjct: 1189 AAGACGAGGAGGA-GATTGAGGAGGAAGATGATGAAGATGATGAAGATGATGATGATGGT 1247 Query: 2311 GATGATGATGAATAAG 2326 GATGATG GAA A G Sbjct: 1248 GATGATGTAGAAGAGG 1263 Score = 293 (44.0 bits), Expect = 0.0044, P = 0.0044 Identities = 93/133 (69%), Positives = 93/133 (69%), Strand = Plus / Plus Query: 2197 GGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGAT 2256 GGAGTT TC G GA AA AG AA G A GA GA GA GAAGATGAGG GAT Sbjct: 1127 GGAGTTCTCT--GAAGACAATGATGAGCAAGGGGATGATGATGATGAAGATGAGGTGGAT 1184 Query: 2257 GAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGAT 2316 GA GA GAGGAGGAG GA GA GAAGA GATGAAGATGA GAAGA GATGATGAT Sbjct: 1185 CGGGAAGACGAGGAGGAGATTGAGGAGGAAGATGATGAAGATGATGAAGATGATGATGAT 1244 Query: 2317 GATGAATAAGTTG 2329 G TGA A GT G Sbjct: 1245 GGTGATGATGTAG 1257 Score = 285 (42.8 bits), Expect = 0.010, P = 0.010 Identities = 85/113 (75%), Positives = 85/113 (75%), Strand = Plus / Plus Query: 2221 AAGAAAAAGAAG-G-AAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGG 2278 AAGA AA GA G G AAG GGA GA GATGA GAAGATGA G GGAT GGA GA GAGG Sbjct: 1138 AAGACAATGATGAGCAAGGGGATGATGATGATGAAGATGAGGTGGATCGGGAAGACGAGG 1197 Query: 2279 AAGATGAA-GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 A GA GA GA GA GAAGATGA GAAGA GATGA GATGATGA A G TG T Sbjct: 1198 AGGA-GATTGAGGAGGAAGATGATGAAGATGATGAAGATGATGATGATGGTGAT 1250 Score = 283 (42.5 bits), Expect = 0.013, P = 0.012 Identities = 121/180 (67%), Positives = 121/180 (67%), Strand = Plus / Plus Query: 2144 GGAAGGATATTGCTGCATATCGAGCTAAA--GGAAAGCCT-GATGCAGCAAAAA-AGGGA 2199 GG A GAT TG TG A AT GAG T A GG AAG C G G AG A AGG A Sbjct: 1156 GGGATGATGATGATGAAGAT-GAGGTGGATCGGGAAGACGAGGAGGAGATTGAGGAGGAA 1214 Query: 2200 GTTG-TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGA 2258 G TG T AAG TGA AA G A GA A GA GG GA GA G AGA GAGGAAGA GA Sbjct: 1215 GATGATGAAGA-TGATGAA-G-ATGATGATGATGGT-GATGATGTAGAAGAGGAAGAAGA 1270 Query: 2259 AGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGA 2318 GA GATGA GA GAGGAGGAAGA GA GAAGA GAAGA GAA A GAAGA AT A A Sbjct: 1271 TGATGATGATGAAGAGGAGGAAGAAGAGGAAGAGGAAGAAGAAAATGAAGACCATCAA-A 1329 Query: 2319 TGAAT 2323 TGA T Sbjct: 1330 TGAGT 1334 Score = 274 (41.1 bits), Expect = 0.032, P = 0.032 Identities = 110/163 (67%), Positives = 110/163 (67%), Strand = Plus / Plus Query: 2171 AAG-GAAAGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAAAGCAA-GAAAA 2227 AAG GAAA CC TGCAG AAAA AG AGTT T AG GA AA GC A GA A Sbjct: 1023 AAGCGAAAACCATTTGCAGTAAAAGCAGATAGTTCTTCAGTA-GACGAATGCTATGAGAG 1081 Query: 2228 AGAAGGAAGAGGAGGAAGATG-AGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 GA GG A G AG A ATG A GA A GAAGAGGATGA GA GAGGAG TGAA Sbjct: 1082 TGATGGCACTGAAG--ACATGGATGATAAGGAAGAGGATGATGATGAGGAGTTCTCTGAA 1139 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTC 2333 GA ATGA GA AAG GA GATGATGATGA GA T AG TGG TC Sbjct: 1140 GACAATGATGAGCAAGGGGATGATGATGATGAAGA-TGAGGTGGATC 1185 >Z93385 Caenorhabditis elegans cosmid M01E5 Length = 27,848 Plus Strand HSPs: Score = 315 (47.3 bits), Expect = 0.00048, P = 0.00048 Identities = 355/621 (57%), Positives = 355/621 (57%), Strand = Plus / Plus Query: 1854 ACATTCTGGTTTTAATAGAGTTAGGATCTGGTAGATAATTGCACCTCAATGAGGCATAAC 1913 A ATTCTG T TT TA A TTA AT TG T GA AATT A T A T C AA Sbjct: 21241 AAATTCTGCTATTTTTACA-TTAAAAT-TGCT-GA-AATTT-AGGT-ATTTTCTCGCAAT 21294 Query: 1914 TTTGCAAATATTAGACTATGCC-ATTTCATGAGTTATAGATTGTTATAATGATCTTGTAT 1972 TTTG AA T TT G T T C ATT C TG G A GAT GT A A GA C G AT Sbjct: 21295 TTTG-AATTGTTTGGATGTACATATTCCTTGTGAAACCGAT-GTGAGCAAGAACCAGCAT 21352 Query: 1973 TTTTATGTTCATTT-A-TT-GA-AGTTCTAGT-TAT-TTCTGGAGT-TGCTGTGGATCTA 2025 TT TA TTT A TT GA AGT TA T T T TT AG T T T GAT A Sbjct: 21353 TTCTACAAGATTTTCAATTAGATAGTAATAATATGTGTTAATAAGCATATTTTAGATGGA 21412 Query: 2026 CAGATA-CGTGATATTTTGGTA-TAACTAGAATCTTGATTTCTTTCATAAAGTTCTGCCA 2083 A TA CG A AT T TAAC A T TT C T C TAA TT T C Sbjct: 21413 -ATTTAGCGAAAAATAACCCTTCTAACCCTACTTTTCTGCACGTCCTTAACATT-TCCTT 21470 Query: 2084 TGTTCTATTTCTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTT 2143 TGTT TT TTT TT CTTTTTT TCC T C G AT C G Sbjct: 21471 TGTTTCGTTAGTTTTTTTCTGCTTTTTTAGATCCATTCCGACG-ATGAACTAGAAGAAGA 21529 Query: 2144 GGAAGGATATT-GCTG-CATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAG 2200 GA G A T G G CA AT GA A AGGAA AG GA AG A AAA G G G Sbjct: 21530 AGACGAAGCTCCGACGACAGAT-GATGAAGAGGAACAGAA-GAGAAAGGAGAAA-GAGCG 21586 Query: 2201 TTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAG-GAAGAG-GAGGAA--GA-TGAGGAAGA 2255 T G AA GAAAAAAG AGAAAAA AG GAA AG GA GAA GA TG GAAG Sbjct: 21587 TAGAAAAAAG-GAAAAAAGGGAGAAAAAAGAGCGAAAAGAGAAGAAACGACTGGAGAAGG 21645 Query: 2256 TGAAGAGGATGAGGA-GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG 2314 GAA GGA GA A GGA GAGGA GA GA GA GA GATGAAGA GA GA A G Sbjct: 21646 AGAATCGGAAGATTAAGGAAGAGGACGACGAGGATTCGGATGATGAAGATGATGAAAAGG 21705 Query: 2315 ATGATGAATAAGTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAA-GCATTTAACC 2373 GA GAA AAG TG TT T G A T T TTTTC TG T T A GC TTT CC Sbjct: 21706 C-GAAGAAAAAGGTG-TTGTTG---A-TGTGGATTTTCCTGATTTTGCATGCTTTTTCCC 21759 Query: 2374 CCCCTGTA---CACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAA 2430 C T T CACAA ACT TTT AAG AAAAAT G TGT G T G A Sbjct: 21760 GCTTTTTTTTGCACAAAAAACTAATTTGCAAGCTAAAAATGG---TGTCGGTTTACGCAG 21816 Query: 2431 GATTTGTTTT-TAAACT-GTACA-GTGTCTTTTTTTGTATAGTTA 2472 A TTGT T TA AC G A A GTGT TTT T TA TTA Sbjct: 21817 AAATTGTGTACTACACGAGGAAAAGTGTGAATTTAAATTTATTTA 21861 >AB009050 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MDF20. Length = 86,699 Plus Strand HSPs: Score = 315 (47.3 bits), Expect = 0.00049, P = 0.00049 Identities = 103/137 (75%), Positives = 103/137 (75%), Strand = Plus / Plus Query: 2190 AAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGA 2249 AAAAAA GGAG GT AAGG GA AA G AAGA AAAGAAG AAGAG AGGAAGATGA Sbjct: 31669 AAAAAACGGAGA-GT-AAGGACGAGAAT-G-AAGATAAAGAAG-AAGAGAAGGAAGATGA 31723 Query: 2250 GGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAA-GAAGAAG 2308 G AAGA GA GAG ATG GA GA AGGAAGATGAA A GA GA GA AA GA GA G Sbjct: 31724 GAAAGAAGA-GAGTATG--GATGATAAGGAAGATGAAAAGGAAGA-GAGCAATGATGATG 31779 Query: 2309 ATGATGATGATGAATAAG 2326 AT A GA GATGAA AAG Sbjct: 31780 ATAAGGAAGATGAAAAAG 31797 Score = 274 (41.1 bits), Expect = 0.036, P = 0.035 Identities = 92/122 (75%), Positives = 92/122 (75%), Strand = Plus / Plus Query: 2206 AAGGCTGAAAA-AAGCAAGAAAAAGAAGGAAGAG-G-A-GGAAGATGAGGAAGATGAAGA 2261 AA G GAA A AAG AAGA A GAA GAAGAG G A GGA GAT AGGAAGATGAA A Sbjct: 31701 AAAGAAGAAGAGAAGGAAGATGA-GAAAGAAGAGAGTATGGATGATAAGGAAGATGAAAA 31759 Query: 2262 GGATGAGGAGGAG-GAGGAAGATGAAGAAGATGAAGATGAAGA-AGAAGATGATGATGAT 2319 GGA GAG AG A GA GA GAT A GAAGATGAA A GAAGA AG A ATGATGAT A Sbjct: 31760 GGAAGAG-AGCAATGATGATGATAAGGAAGATGAAAAAGAAGAGAGCA-ATGATGATAAG 31817 Query: 2320 GAATA 2324 GAA A Sbjct: 31818 GAAGA 31822 Score = 268 (40.2 bits), Expect = 0.067, P = 0.065 Identities = 84/114 (73%), Positives = 84/114 (73%), Strand = Plus / Plus Query: 2216 AAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGG 2275 A AG AAG A AGAA GAAGA A GAAGA GAG A GA GA GAG A GA GAG AG Sbjct: 31678 AGAGTAAGGACGAGAATGAAGATAAAGAAGAAGAGAAGGAAGATGAGAAAGAAGAG-AGT 31736 Query: 2276 A-GGAAGATGAAGAAGATGAAGATGAAGA-AGAAGATGATGATGATGAATAAGTTG 2329 A GGA GAT A GAAGATGAA A GAAGA AG A ATGATGATGAT A AAG TG Sbjct: 31737 ATGGATGATAAGGAAGATGAAAAGGAAGAGAGCA-ATGATGATGATAAGGAAGATG 31791 Score = 246 (36.9 bits), Expect = 0.68, P = 0.49 Identities = 130/206 (63%), Positives = 130/206 (63%), Strand = Plus / Plus Query: 2100 TTAATCTTTTTTTCT--TCCC--TAC-TGTTTTATCCTCCCTTTGCTTTGGAAGGAT-AT 2153 TT TCTTT T TCT TCC TAC TG TT T T C TTT CTTTGG T A Sbjct: 33451 TTCGTCTTTGTGTCTGGTCCAAGTACCTGAATTCTGATTCGTTT-CTTTGGGTTCTTTAC 33509 Query: 2154 TGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGT-T-G-TCAAGGC 2210 G CA A AG AGGAA GC A G A AA AAA GAGT T G TCA C Sbjct: 33510 AGAGCCAAAAAAAGACCGAGGAA-GCAACAAGGACTAACAAAAAGAGTGTAGCTCATT-C 33567 Query: 2211 TGAAAAA-AGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGG 2269 TGA A AG GA AAGA G AAGAGGA GA GA GA GAAGA AAGAG A GAGG Sbjct: 33568 TGATGATGAGTCTGAGGAAGA-GAAAGAGGACGACGAAGAAGAAGAGAAAGAGCAGGAGG 33626 Query: 2270 AGGAGGAGGAAGATGAAGAAGATGAAGATG 2299 GAGGAGGAAGA GA GA ATGAA ATG Sbjct: 33627 TTGAGGAGGAAGAGGAGGAGAATGAAAATG 33656 Score = 230 (34.5 bits), Expect = 3.6, P = 0.97 Identities = 110/168 (65%), Positives = 110/168 (65%), Strand = Plus / Plus Query: 2144 GGAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTG 2203 G AAGGA TG A AT AG AAG AAG GATG AG AAA AAG GAGT Sbjct: 31681 GTAAGGACGAGAATGAAGATAAAGAAGAAGAGAAGGAAGATG-AG-AAAGAAGAGAGTA- 31737 Query: 2204 TCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAG-AG-GAGGAAGATGAGGAAGATGAAGA 2261 T A G T AA AAG A GAAAA GAAG AG A GA GA GAT AGGAAGATGAA A Sbjct: 31738 TGGATGAT-AAGGAAG-ATGAAAAGGAAGAGAGCAATGATGATGATAAGGAAGATGAAAA 31795 Query: 2262 GGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGA-AG-AAGATG 2311 GA GAG AG A A GA GAT A GAAGA AA A GAAGA A AAGA G Sbjct: 31796 AGAAGAG-AGCA--ATGATGATAAGGAAGACAAAAAAGAAGATATCAAGAAG 31844 Score = 207 (31.1 bits), Expect = 1.1, Sum P(3) = 0.68 Identities = 189/307 (61%), Positives = 189/307 (61%), Strand = Plus / Plus Query: 537 TAGCAAGCTACTTTGTCAGTTTAGAGTGTAAATGTA-CAATCAAAGTTTCTTAGCTAATA 595 TA A G TAC T GT A TTT GA GTAA GTA CAAT AAA CT G TA T Sbjct: 47345 TAAAACGGTACGTAGTTA-TTT-GAA-GTAAG-GTAACAATTAAATAGCCTCTGTTATTG 47400 Query: 596 -CTT-GTTCATATTGGTTATATTTAAATAGTATAAAATTCCTGTTGGGTGGGAGTGTTCC 653 CTT GTT T TTG TATATTTAAATA T AAAAT CC G T A G C Sbjct: 47401 TCTTTGTTT-T-TTGTGTATATTTAAATA-TC-AAAAT-CCACCGGTATAAAACGG--CG 47453 Query: 654 CAGAGCATTTGAATTAGAC--ATTTGGTCTCC-TTTGC-CC-AGTGTATCTCCTTTTGAT 708 A GC TTTG ATT GAC A TT T TC TTT C CC A T TA T C T G T Sbjct: 47454 TAATGCCTTTGTATTGGACCCAATTCTT-TCAATTTTCACCTAATTTAATTACCTCCG-T 47511 Query: 709 CTTT-TTATTTCTTGAAAAATACTATCCCTTTGAAATAGTGTAATTGTAG-AATGT-TCA 765 TTT TT TTT TG A A T TC CTT A ATA T TA TTG AG AA T T A Sbjct: 47512 ATTTATTTTTTAGTGCACTTCAATGTCTCTTGCATATA-TATA-TTGGAGCAAATTATAA 47569 Query: 766 TC-TAGGGTTCTAGCTAGTATAAATTAAATAGTTGTAAATTAAGCTTTGGTTGTGA-AGG 823 C TA GTTC A TAGT AAATT TAGTTG TTAA CT T TT GA A Sbjct: 47570 ACATAATGTTC-A--TAGTG-AAATTGT-TAGTTGGTT-TTAATCTCTTTTTAAGACAAC 47623 Query: 824 ATATTTAGTATATTATA-GTA 843 ATAT GT ATT TA GTA Sbjct: 47624 ATATAATGTCAATTGTATGTA 47644 Score = 199 (29.9 bits), Expect = 1.1, Sum P(3) = 0.68 Identities = 97/139 (69%), Positives = 97/139 (69%), Strand = Plus / Plus Query: 2192 AAAAGGGAG-T-TGTCAAGGCT-GAAAAA-AGCAAGAAAAAGAAGGAAGAGGAG-GAAGA 2246 AA AGG A T TG AA GC GA A A AG AAGAAAAAGAA GAAGA GA GAA A Sbjct: 84162 AACAGGAAAATCTGAAAAAGCAAGAGATAGAG-AAGAAAAAGAAAGAAGAAGATCGAA-A 84219 Query: 2247 TGAGGAAG-ATGAAGAGGATGAGGAGGAGG-AGGAAGATGAAGAAGATGAAGATGAAGAA 2304 GA AAG A G AGA ATG GGA G AGGA GATG A AAGA AAGA AAGAA Sbjct: 84220 -GAAAAAGGAGGCAGAA-ATGGCTTGGAAGCAGGA-GATGGAAAAGAAAAAGA--AAGAA 84274 Query: 2305 GAAGATGATGATGATGAATAAGTTGG 2330 GAAGA A GA GA AA AGTT G Sbjct: 84275 GAAGAA-AGGAAGAGAAAGGAGTTTG 84299 Score = 145 (21.8 bits), Expect = 1.1, Sum P(3) = 0.68 Identities = 141/240 (58%), Positives = 141/240 (58%), Strand = Plus / Plus Query: 1772 ATTAAGGTCTGACAGTGTAAACCTG-TAGAGTGCTTTTTTGCAT--TCAGAAGG-TGGC- 1826 ATTAAGGTCTGA AGTGT A G TA AGT TTT GCAT T A AA G TG Sbjct: 79470 ATTAAGGTCTGATAGTGTTAGTGAGATAAAGTTATTTAA-GCATGATGAAAATGATGAAG 79528 Query: 1827 AGTGTCTACCCTTTAATCAAAGTCTCTACATTCTGGTTTTAATAGAGTT-AGGA-TCTGG 1884 AGTGTC A A T A C TA ATTCT TAA AGAG A A T T Sbjct: 79529 AGTGTCGAGAAGA-AGTGGAGAACAGTA-ATTCTCAAGGTAAAAGAGGAGATCAATGTAT 79586 Query: 1885 TA-GATAATTGCACCTCAATGAGGCATA-ACTTTGCAAATATTA-GACTATGCCATTTCA 1941 TA GAT A TG ACCT A GAG C T AC TTGCA AT A G AT C T TCA Sbjct: 79587 TAAGATTAGTGTACCTACA-GAGTCTTTTACCTTGCATC-ATGAAGTGGATTCAGTGTCA 79644 Query: 1942 TGAG-TTATAGATTGTTATAATGAT-CTTGTATTTTTATGTTCAT-T-TATTGAAGTTCT 1997 A TT AG T GT AT T AT CTT TATT T A AT T TA T AGT CT Sbjct: 79645 ATATCTTCAAG-TGGTGATGCTTATGCTTCTATTGT-ACCAGAATGTCTACTCGAGT-CT 79701 Query: 1998 AGTTATTT 2005 GT AT T Sbjct: 79702 GGTCATGT 79709 >AF017349 Mus musculus desmoglein 3 (Dsg3) gene, intron sequence. Length = 2094 Plus Strand HSPs: Score = 312 (46.8 bits), Expect = 0.00050, P = 0.00050 Identities = 112/167 (67%), Positives = 112/167 (67%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAAAGCAAG 2223 GAG AAGGA G GA G AG A A GGAG G A AGG G AA G A G Sbjct: 1045 GAGAAGAAGGAGGGAGGGAGGTAGGAGGAGGAGGAGGAGGGAGAGGGAGGAAGTGGTA-G 1103 Query: 2224 AAAAAGAAGGAAGAGGAGGA--AGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAG 2281 A AAGAAGGA GAGGAG A AGA GAGGA GA GA GAGGA GAGGAGGAGGA GAAG Sbjct: 1104 TAGAAGAAGGAGGAGGAGTAGGAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAG 1163 Query: 2282 ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTG 2329 A GA GAAGA GA GA GA GAAGA G GA GA GA GAA AGT G Sbjct: 1164 AAGAGGAAGAGGAGGAGGAGGAAGAGGGGGAGGAGGAGGAAGGAGTAG 1211 Score = 301 (45.2 bits), Expect = 0.0016, P = 0.0016 Identities = 165/267 (61%), Positives = 165/267 (61%), Strand = Plus / Plus Query: 2170 AAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTGTCA-AGGCTGAAAAAAGCAAGAAAA 2227 A AGGAA AG GA G AG AA A GGGAG G A G G A A AG AAGAA A Sbjct: 1165 AGAGGAAGAGGAGGAGG-AGGAAGAGGGGGAGGAGGAGGAAGGAGTAGAGAGGAAGAAGA 1223 Query: 2228 AGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 AGA GGAAGAGGAG A GA G GAAG GAAGAG A GAGGAGGA GAGGAAGA GAAG Sbjct: 1224 AGA-GGAAGAGGAG-AGGAAGGAGAAGGAGAAGAGAAGGAGGAGGAAGAGGAAGAAGAAG 1281 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCAGTTTTTT 2347 A G GAAGATGA AA AA ATGA GA ATG TAA T TCTAG G A TT TT Sbjct: 1282 A-G--GAAGATGACTAATAA-ATGAGGA--ATGC-TAACCTAAATCTAG-G-A-TTCCTT 1331 Query: 2348 TTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAAAGAAAAA 2407 CTTG CT T CA T A A A A C CT CT T AA AAAAA Sbjct: 1332 GGGACTTG-CTTTGGGCCACCTTAGTTTAAAAAAAAAATCAAGCTGCTAT-AAGTAAAAA 1389 Query: 2408 AATTGAAATGTAAGGCTGTGTAAGATTTG 2436 A T AAA T CT TG AAGA TTG Sbjct: 1390 CACTTAAACTTGGTTCTATG-AAGAGTTG 1417 Score = 300 (45.0 bits), Expect = 0.0018, P = 0.0018 Identities = 116/162 (71%), Positives = 116/162 (71%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCC-TGAT-GCAGCAAAAAAG-GGAGTTGTCAAGGCTGAAAAA-AGC 2220 GAG A AGG A G TG T G AG AA AA G GGAG GT AGG GAA A AG Sbjct: 1081 GAGGGAGAGGGAGGAAGTGGTAGTAG-AAGAAGGAGGAGGAGT--AGGA-GAAGAGGAGG 1136 Query: 2221 AAGAAAAAGA--AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGG 2278 A GA A GA AGGA GAGGA GAAGA GAGGAAGA GA GAGGA GA GAGG GGAGG Sbjct: 1137 AGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAGGAAGAGGAGGAGGAGGAAGAGGGGGAGG 1196 Query: 2279 AAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GA GAAG AG GA GA GAAGAAGAAGA GA GA GA GA AAG Sbjct: 1197 AGGAGGAAGGAGTAGA-GAGGAAGAAGAAGAGGAAGAGGA-GAGGAAG 1242 Score = 284 (42.6 bits), Expect = 0.0097, P = 0.0096 Identities = 112/168 (66%), Positives = 112/168 (66%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAA-AGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAA-AGCA 2221 GAG A AGG A AG GA G AG A AA AGGGAG AGG GA A AG A Sbjct: 1023 GAGGGAGAGGGAGAGGGAGAGGGAGAAGAAGGAGGGAGGGAGGTAGGAGGAGGAGGAGGA 1082 Query: 2222 AGAAAAAGAAGGAAGAGG-AG--GAAGATG-AGGAAGATGAAGAGGATGAGGAGGAGGAG 2277 G A A G AGGAAG GG AG GAAGA G AGGA GA A GAG A GAGGAGGAGGAG Sbjct: 1083 GGGAGAGGGAGGAAGTGGTAGTAGAAGAAGGAGGAGGAGTAGGAGAA-GAGGAGGAGGAG 1141 Query: 2278 GAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 GA GA GA GA GA GAAGA GAAGA GAAGA GA GA GA GAA A G Sbjct: 1142 GAGGAGGAGGAGGAGGAAGAAGAAGAGGAAGAGGAGGAGGAGGAAGAGG 1190 Score = 253 (38.0 bits), Expect = 0.26, P = 0.23 Identities = 103/151 (68%), Positives = 103/151 (68%), Strand = Plus / Plus Query: 2177 AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAA 2235 A CCTGA G AG A AAAAGG AG G AGG GA A AG AGA AGA GGA Sbjct: 983 ATCCTGA-GAAGAAGAAAAGGAAGAAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGA- 1040 Query: 2236 GAGGAGGAAGATG-AGGAAGATGAAG-AGGATGAGGAGGAGGAGGAAGATGAAG-AAGAT 2292 GAGG GAAGA G AGG AG GA G AGGA GAGGAGGAGGAGG AGA G AG AAG Sbjct: 1041 GAGGGAGAAGAAGGAGGGAGG-GAGGTAGGAGGAGGAGGAGGAGGGAGAGGGAGGAAGTG 1099 Query: 2293 GAAGATGAAGAAGAAG-ATGATGATGATGAATAAG 2326 G AG GAAGAAG AG A GA A GA GAA A G Sbjct: 1100 GTAGTAGAAGAAGGAGGAGGAGTAGGA-GAAGAGG 1133 >X14926 Mouse mRNA for calreticulin Length = 2114 Plus Strand HSPs: Score = 312 (46.8 bits), Expect = 0.00050, P = 0.00050 Identities = 134/190 (70%), Positives = 134/190 (70%), Strand = Plus / Plus Query: 2141 TTTGG-AAGGATAT-TGCTGCAT-ATCGAG-CTAAAGGAAAGCCTGATGCAGCAAAAA-A 2195 TTTGG AA GA A TG G T A C AG CT AG AAGC GATG AG A AA A Sbjct: 1093 TTTGGCAATGAGACGTGGGGTGTTACCAAGGCTGCAGAGAAGCA-GATGAAGGACAAGCA 1151 Query: 2196 GG--GAGTTGTCA-AGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGA 2252 GG GAG G CA AGGCT AA AAG AAGAA A GA AAGA G G AA A GAGGA Sbjct: 1152 GGATGAGGAG-CAGAGGCTTAAGGAAG-AAGAAGAGGAC--AAGAAGCGTAA-A-GAGGA 1205 Query: 2253 AGATGAAGAGGATGAGGAGGAGGAGGAAGATGA-AGAAGATGAAGATGAAGAAGAAGATG 2311 AGA GAAG GA GA A GAGGA GA GATGA AGA GATGAAGATGA GA GAAGA G Sbjct: 1206 AGAAGAAGCTGAGGATAAAGAGGATGATGATGACAGA-GATGAAGATGAGGACGAAGAAG 1264 Query: 2312 ATGATGATGAATAAGTTG 2329 ATGA A GA AAG TG Sbjct: 1265 ATGAGAAGGAGGAAGATG 1282 Score = 300 (45.0 bits), Expect = 0.0018, P = 0.0018 Identities = 126/187 (67%), Positives = 126/187 (67%), Strand = Plus / Plus Query: 2155 GCTGCATATC-G-AGCTAAAGGA-AAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCT 2211 GCTGCA A G AG T AAGGA AAGC GATG AG A A AGG G AAG Sbjct: 1123 GCTGCAGAGAAGCAGATGAAGGACAAGCAGGATG-AGGAGCAGAGGCTTAAGG-AAGAA- 1179 Query: 2212 GAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAG 2271 GAA A CAAGAA AA GA GA GA GAAG TGAGGA A GA GA GATGA GA Sbjct: 1180 GAAGAGGACAAGAAGCGTAAAGAGGAAGAAGAAGCTGAGGATAAAGAGGATGATGATGAC 1239 Query: 2272 GAG-GAGGAAGATGAAGAAGATGAAGATGAAGAAGAAG-ATGATGATGATGAATAAGTTG 2329 AG GA GAAGATGA GA GA GAAGATGA GAAG AG A GATGA GA GAAT TG Sbjct: 1240 -AGAGATGAAGATGAGGACGAAGAAGATGA-GAAGGAGGAAGATGAGGAAGAATCCCCTG 1297 Query: 2330 GTTCTAGCGCAG 2341 G C AGC AG Sbjct: 1298 GC-CAAGCCAAG 1308 Score = 231 (34.7 bits), Expect = 2.6, P = 0.93 Identities = 123/184 (66%), Positives = 123/184 (66%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGA--AAGCCTGATGCAGCAAAAAAGGGAGTT 2202 GAAGGA A GC G AT GAGC A AGG AAG GA G AG A AAG AG Sbjct: 1140 GAAGGACAA-GCAGGATGAGGAGC-AGAGGCTTAAGGAAGAAGAAGAGGACAAGA-AGC- 1195 Query: 2203 GTCAAGGCTGAA-AA-AAGCA-AGAA-AAAGAAGGAAGAGGAGGA-AGATGAGGAAGATG 2257 GT AAG GAA AA AAGC AG A AAAGA GGA GA GA GA AGA GA GAAGATG Sbjct: 1196 GTAAAGAG-GAAGAAGAAGCTGAGGATAAAGA-GGATGATGATGACAGA-GATGAAGATG 1252 Query: 2258 AAGAGGATGAGGA-G-GA-GGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATG 2314 A GA GA GA GA G GA GGAGGAAGATGA GAAGA TG AAG A GATG Sbjct: 1253 AGGACGAAGAAGATGAGAAGGAGGAAGATGAGGAAGAATCCCCTGGCCAAGCCAAGGATG 1312 Query: 2315 ATGATGAATAAG 2326 A G TG A A G Sbjct: 1313 A-GCTGTAGAGG 1323 >D78303 Rattus norvegicus brain mRNA, complete cds. Length = 3206 Plus Strand HSPs: Score = 313 (47.0 bits), Expect = 0.00050, P = 0.00050 Identities = 113/163 (69%), Positives = 113/163 (69%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAA-GGC--TGAAAAA-AGC 2220 GAG AAG A A GA G AG AA AGG AG TG A GG TGA A AG Sbjct: 924 GAGGGGAAGAAGATGTAGAGGAAGATGAAGAGGTAGATGAAGATGGAGATGATGATGAGG 983 Query: 2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGA- 2279 AAG A GAAG A G GGAGGA GA GAGGA GA GAAGA GATGAGGAGGAGGAGGA Sbjct: 984 AAGTGGATGAAG-ATGCGGAGGAGGAGGAGGACGAGGAAGAAGATGAGGAGGAGGAGGAT 1042 Query: 2280 -AG-ATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGA 2321 AG A GAAGAAGA GAAGA GAAGAAGAA ATGA A GATGA Sbjct: 1043 GAGGAAGAAGAAGAGGAAGAGGAAGAAGAATATGAACAGGATGA 1086 Score = 304 (45.6 bits), Expect = 0.0013, P = 0.0013 Identities = 100/145 (68%), Positives = 100/145 (68%), Strand = Plus / Plus Query: 2182 GATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAAGAGGA 2240 GA G AG A A G AG TGT AGG GA AA AG AGA AAGA GGA GA GA Sbjct: 917 GAGGAAGGAGGGGAAGAAGATGTAGAGGAAGATGAAGAGGTAGATGAAGATGGA-GATGA 975 Query: 2241 GGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGA 2300 GA GA GA G GATGAAGA G GAGGAGGAGGAGGA GA GAAGAAGATGA GA GA Sbjct: 976 TGATGAGGAAGTGGATGAAGATGCGGAGGAGGAGGAGGACGAGGAAGAAGATGAGGAGGA 1035 Query: 2301 AGAAGAAGATGATGATGATGAATAAG 2326 GA GA GA GA GA GA GA AAG Sbjct: 1036 GGAGGATGAGGAAGAAGAAGAGGAAG 1061 Score = 303 (45.5 bits), Expect = 0.0014, P = 0.0014 Identities = 107/159 (67%), Positives = 107/159 (67%), Strand = Plus / Plus Query: 2172 AGGAAAGCCTG-ATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAG 2229 AGGAA G G A G AG A AGG AG TG AGG GA AA A AGA A G Sbjct: 918 AGGAAGGAGGGGAAGAAGATGTAGAGGAAGATGAAGAGGTAGATGAAGATGGAGATGATG 977 Query: 2230 A--AGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAG 2287 A AGGAAG GGA GAAGATG GGA GA GA GAGGA GAGGA GA GA GA GA GA G Sbjct: 978 ATGAGGAAGTGGATGAAGATGCGGAGGAGGAGGAGGACGAGGAAGAAGATGAGGAGGAGG 1037 Query: 2288 AAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAG 2326 A GATGA GA GAAGAAGA GA GA GA GA GAATA G Sbjct: 1038 AGGATGAGGAAGAAGAAGAGGAAGAGGAAGAAGAATATG 1076 Score = 275 (41.3 bits), Expect = 0.028, P = 0.027 Identities = 129/193 (66%), Positives = 129/193 (66%), Strand = Plus / Plus Query: 2171 AAGGAAAGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAA-AA 2228 A GGA A TGATG AG AA A G AG TG AGG GA A C AG AA AA Sbjct: 966 ATGGAGATGATGATG-AGGAAGTGGATGAAGATGCGGAGGAGGAGGAGGACGAGGAAGAA 1024 Query: 2229 GAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGA 2288 GA G A GAGGAGGA GATGAGGAAGA GAAGAGGA GAGGA GA GA A GA A GA Sbjct: 1025 GATG-AGGAGGAGGAGGATGAGGAAGAAGAAGAGGAAGAGGAAGAAGAATATGAACAGGA 1083 Query: 2289 AGATGA-AGAT--GAAG-AAGAAGATGATGATGATGA-ATAAGTTGGTTCTAGCGCAGTT 2343 GA GA AGAT GAAG AAGAAG ATGAT ATGA A GT G T GC CAGT Sbjct: 1084 TGA-GAGAGATCAGAAGGAAGAAGGGAATGATTATGACACCCGTAG-TGAG-GC-CAGTG 1139 Query: 2344 TTTTTT-TTCTT-GTCTAT 2360 TT T TTCT GTCT T Sbjct: 1140 ATTCTGGTTCTGAGTCTGT 1158 Score = 224 (33.6 bits), Expect = 6.0, P = 1.0 Identities = 78/108 (72%), Positives = 78/108 (72%), Strand = Plus / Plus Query: 2227 AAGAAGG-AAGAGGAGGAAGA-TGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATG 2284 AA A GG AA A A AGA TGAGGA GA G AG GGA GA GA G GAGGAAGATG Sbjct: 891 AACAGGGCAACAACACTGAGAATGAGGAGGAAGGAGGGGAAGAAGATGTAGAGGAAGATG 950 Query: 2285 AAGA---AGATGAAGATGAAGAAGAAGATGATGATGATGAAT-AAGTTG 2329 AAGA AGATGAAGATG AGA GA GATGA GA G TG AT AAG TG Sbjct: 951 AAGAGGTAGATGAAGATGGAGATGATGATGAGGAAG-TGGATGAAGATG 998 >S51239 calreticulin [Aplysia californica=marine snails, mRNA, 1862 nt] Length = 1862 Plus Strand HSPs: Score = 311 (46.7 bits), Expect = 0.00053, P = 0.00053 Identities = 125/174 (71%), Positives = 125/174 (71%), Strand = Plus / Plus Query: 2165 GAGCTAAAG--GAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCT-GAAAAAAGCA 2221 GAG AAAG GAAAG C G T CAG A A GGA G AAGGC GA AA AG A Sbjct: 1108 GAGAAAAAGATGAAAGAC-GCT-CAGGATGAGGAGGACAGG--AAGGCAAGAGAAGAGGA 1163 Query: 2222 AGAAAAAGA-AGGAA-GAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGA 2279 AGAAAA A AGGAA GAGGAGGAAGATG AA A AAGA GATGAGGAGGAGGA G Sbjct: 1164 AGAAAAGAAGAGGAAAGAGGAGGAAGATGCA-AACA--AAGATGATGAGGAGGAGGAAGC 1220 Query: 2280 AGATGAAGAAGATGAAGATGAAGAAGAAGATGATG-ATGATGAATAAGTTG-GTTCTAGC 2337 GA GAAGAAGA GA GA GAAGA GA GATG TG A A GA AAG G GTT TAG Sbjct: 1221 TGAGGAAGAAGAGGAGGAAGAAGATGATGATGCTGCACCA-GAGAAAGACGAGTTATAGA 1279 Query: 2338 G 2338 G Sbjct: 1280 G 1280 >AF003627 Homo sapiens cosmids Qc5E3, LC1833, IC0177, Qc12F11 and Qc18D10 Length = 81,007 Plus Strand HSPs: Score = 314 (47.1 bits), Expect = 0.00054, P = 0.00054 Identities = 112/162 (69%), Positives = 112/162 (69%), Strand = Plus / Plus Query: 2170 AAAGGAA-AGCCTGATGCAGCAAAAA-AGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAA 2226 A AGGA AG G G AG A AA AGGG G G A G GA A AG A GAA Sbjct: 35042 AGAGGAGGAGTGGGGGGGAGGAGAAGGAGGGGGAGGAGGAAGAAGAGGAGGAGGAGGAAG 35101 Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AAGAAG A GAGGAGGA GA GAGGAAG GAAGAGGA AGGAGGAGGAGGAAGA GAA Sbjct: 35102 AAGAAG-AGGAGGAGGAGGAAGAGGAAGTAGAAGAGGAGAAGGAGGAGGAGGAAGAGGAA 35160 Query: 2287 GAAGATGAAGATGAAGAAGAA-GAT-GATGAT-GATGAATAAG 2326 G AGA G AGA GAAGAA AA GA GA GA GA GAA AAG Sbjct: 35161 GGAGAAGGAGAAGAAGAAAAAAGAAAGAAGAAAGAAGAAGAAG 35203 Score = 279 (41.9 bits), Expect = 0.021, P = 0.021 Identities = 119/183 (65%), Positives = 119/183 (65%), Strand = Plus / Plus Query: 2150 ATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAG-CAAAAAAGGGAGTTGTCAA 2207 A A T CTGC T G G AAAG A A CCTG CA C AAAAA GA AA Sbjct: 34967 ACACTCCTGCCTGG-GTGACAAAGCCAGACCCTGTCTCAAACCAAAAAAAGAAAAAAAAA 35025 Query: 2208 GGCTGAAAAAAGCAAGAAAAAGA--AG-GAAGAGGAGGAAGATGAGGAAGATGAAGAGGA 2264 A AAAAG AAGAA A GA AG G G GGAGGA A GAGG GA GA GA GA Sbjct: 35026 AAAAAAGAAAAG-AAGAAGAGGAGGAGTGGGGGGGAGGAGAAGGAGGGGGAGGAGGAAGA 35084 Query: 2265 TGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATA 2324 GAGGAGGAGGAGGAAGA GAAGA GA GA GA GAAGA GAAG GA GA GA GAA Sbjct: 35085 AGAGGAGGAGGAGGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAGTAGAAGAGGA-GAAGG 35143 Query: 2325 AGTTGG 2330 AG GG Sbjct: 35144 AGGAGG 35149 Score = 243 (36.5 bits), Expect = 0.92, P = 0.60 Identities = 103/148 (69%), Positives = 103/148 (69%), Strand = Plus / Plus Query: 2165 GAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAG 2223 GAG AAGGA G GA G AG AA AA GGAG G AGG GAA AA AG A G Sbjct: 35059 GAGGAGAAGGAGGGG--GAGG-AGGAAGAAGAGGAGGAGG--AGGAAGAAGAAGAGGAGG 35113 Query: 2224 AAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA-GGAGGAGGAAGA 2282 A A GAAG A GA G GAAGA GAG A GA GA GAGGA GAGGA GGAG AGGA GA Sbjct: 35114 AGGAGGAAG-AGGAAGTAGAAGAGGAGAAGGAGGAGGAGGAAGAGGAAGGAGAAGGA-GA 35171 Query: 2283 TGAAGAAGAT-GAA-GATGAA-GAAGAAGATGA 2312 GAAGAA A GAA GA GAA GAAGAAGA GA Sbjct: 35172 AGAAGAAAAAAGAAAGAAGAAAGAAGAAGAAGA 35204 >AC003959;AC000947;AC000948;AC000949;AC000950;AC001209;L81595 Homo sapiens chromosome 5, P1 clone 1029A7 (LBNL H15), complete Length = 83,684 Minus Strand HSPs: Score = 314 (47.1 bits), Expect = 0.00054, P = 0.00054 Identities = 290/482 (60%), Positives = 290/482 (60%), Strand = Minus / Plus Query: 2325 TTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTC 2266 T AT C TC TC TC TCTTCTTCTTC TC TC TCTTC TC T TTC TC TC TCC C Sbjct: 52401 TCATCCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCTTCCTCTTGTTCTTCTTCTTCC-C 52459 Query: 2265 ATCCTCTTCA-TC-TTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTTTCAGCC 2208 TC TCTT A TC TTC TC T TT C C TCT C TTCTTTTTCTT CT T C C Sbjct: 52460 -TCTTCTTTAATCCTTCTTCCTTTTTC-CTTCTGCTTTCTTTTTCTT-CTCCCT-CTCTC 52515 Query: 2207 TTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTA--GCTCGATATG-CAGCAATA 2151 T G C CTCC T T T TG AGGCTTTCCTT A GC ATAT CAGC AT Sbjct: 52516 T-GTCT-CTCCATCTCTCCTTGTTGGAGGCTTTCCTTAAATGCCAAATATCTCAGCTATC 52573 Query: 2150 TCCTTCCAAAGCA--AAGGGAGGATAAAACAGTAGGGAAGAAAAAAAGATTAAGGAAAGA 2093 T TT A A AA GGAG A AAA AG G A AAA G TT GGA A A Sbjct: 52574 TG-TTGGTATTTATTAATGGAGCAATAAA-AGGCTGAACTAAACTCTGCTTGGGGAGA-A 52630 Query: 2092 AATAG-AACATGGCAGA-ACTTTATGAAAGAAATCAAGATTCTAGTTAT--A-CCAA-AA 2039 TA AAC GG ACT A GAA AA CA TT TAGTTA A CC AA Sbjct: 52631 TTTATCAACTGGGGTTTCACTACAGGAAGCAAGACAGTCTTTTAGTTAACAAGCCTCCAA 52690 Query: 2038 T-ATCACGTAT-CTGTAGATCCACAGCAACTCCAGAAATAACTAGAACTTCAATAAATGA 1981 T A CAC T T CT TAGA C A G CT A A T TA A T AT G Sbjct: 52691 TGAGCACCTTTTCTCTAGAGCTAG-GTTTCTT-A-ACCTTGGTACTAGTGACATGTTGGG 52747 Query: 1980 ACATAAAAATACAAGATCATTATAACAATCTATAACTCATGAAATG--GCATAGTCTAAT 1923 CA AA AAT C T TT T A A CT T CTCATG A TG G AT GT TA Sbjct: 52748 CCA-AAGAATTCCT--TG-TTGTCAGAGGCTGT--CTCATGCATTGTAGAAT-GTTTAGC 52800 Query: 1922 ATTTGCAAAG--TTATGCCTCATTGAGGTGCAATTATCTACCAGA-TCCTA-ACTCTATT 1867 A CA G TT TGCCT A T A TGC A TA ACC TCC A A T T T Sbjct: 52801 AGCACCAGTGACTTCTGCCT-ACTAAA-TGCCAGTAGTAACCCCCCTCCCAGAGT-TGTG 52857 Query: 1866 AAAACCAGAATGTA-G-AGACTTTG 1844 A AACCA AATGT G A AC TTG Sbjct: 52858 ATAACCAAAATGTCTGTAAACATTG 52882 Score = 287 (43.1 bits), Expect = 0.0092, P = 0.0091 Identities = 99/136 (72%), Positives = 99/136 (72%), Strand = Minus / Plus Query: 2315 TCATCATCTTCTTC-TTCATCTTCATCTTCTTCATCTTCCTCCTCCTCCTCATCCTCTTC 2257 TC T TC TC TC TTC TCTTC TCTTCTTC TC TCCTCCTC TCCTC T TCTTC Sbjct: 52392 TCGTTGTCGTCATCCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCTTCCTCTTGTTCTTC 52451 Query: 2256 ATCTTCC-TCATCTTCC-TCCT-CTTCCTTCTTT-TTCTTGCTTTTTTCAGCCTTGACAA 2201 TCTTCC TC TCTT TCCT CTTCCTT TT TTCT GCTTT TT C TT C Sbjct: 52452 TTCTTCCCTCTTCTTTAATCCTTCTTCCTTTTTCCTTCT-GCTTTCTTTTTC-TTCTCC- 52508 Query: 2200 CTCCCTTTTTTGCTGCATC 2182 CTC CT T T CT CATC Sbjct: 52509 CTCTCTCTGTCTCTCCATC 52527 >V01144 Sea urchin (P. miliaris) gene for histones H1, H4, H2B, H3 and H2A Length = 6700 Plus Strand HSPs: Score = 313 (47.0 bits), Expect = 0.00056, P = 0.00056 Identities = 81/100 (81%), Positives = 81/100 (81%), Strand = Plus / Plus Query: 2227 AAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAA 2286 AAGAAG AAGA GA GAAGA GA GAAGA GAAGA GA GA GA GA GA GAAGA GAA Sbjct: 590 AAGAAG-AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 648 Query: 2287 GAAGATGAAGATGAAGAAGAAGATGATGATGATG-AATAAG 2326 GAAGA GAAGA GAAGAAGAAGA G GATG TG AATAAG Sbjct: 649 GAAGAAGAAGAAGAAGAAGAAGAAGGGGATGGTGGAATAAG 689 Score = 276 (41.4 bits), Expect = 0.027, P = 0.027 Identities = 72/93 (77%), Positives = 72/93 (77%), Strand = Plus / Plus Query: 2239 GAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGAT 2298 || ||||| || ||||| ||||| || || || || || ||||| |||||||| ||||| Sbjct: 589 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 648 Query: 2299 GAAGAAGAAGATGATGATGATGAATAAGTTGGT 2331 ||||||||||| || || || ||| | |||| Sbjct: 649 GAAGAAGAAGAAGAAGAAGAAGAAGGGGATGGT 681 Score = 274 (41.1 bits), Expect = 0.034, P = 0.033 Identities = 70/89 (78%), Positives = 70/89 (78%), Strand = Plus / Plus Query: 2233 GAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGAT 2292 ||||| || ||||| || ||||| ||||| || || || || || ||||| |||||||| Sbjct: 589 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 648 Query: 2293 GAAGATGAAGAAGAAGATGATGATGATGA 2321 ||||| ||||||||||| || || | || Sbjct: 649 GAAGAAGAAGAAGAAGAAGAAGAAGGGGA 677 Score = 251 (37.7 bits), Expect = 0.38, P = 0.31 Identities = 63/79 (79%), Positives = 63/79 (79%), Strand = Plus / Plus Query: 2248 GAGGAAGATGAAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAA 2307 || ||||| ||||| || || || || || ||||| |||||||| ||||| ||||||||| Sbjct: 589 GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 648 Query: 2308 GATGATGATGATGAATAAG 2326 || || || || ||| ||| Sbjct: 649 GAAGAAGAAGAAGAAGAAG 667 >S38627 {pseudogene} PTMAP5=prothymosin alpha [human, Genomic, 1 gene, 743 Length = 743 Plus Strand HSPs: Score = 302 (45.3 bits), Expect = 0.00056, P = 0.00056 Identities = 128/192 (66%), Positives = 128/192 (66%), Strand = Plus / Plus Query: 2145 GAAGGATATTGCTGCATATCGAGCTAAAGGAA-AGCCTGATGCAGCAAAAAAGGGAGTTG 2203 GAAGGA TTG G A A AG AA GGAA AG C G C GC AA GGGA T Sbjct: 287 GAAGGAAGTTGTGGAAGAGGCAGAAAATGGAAGAGAC-GCCCCTGCTAAC--GGGAATGC 343 Query: 2204 TCAAGGCTGAAAAA----AGCAAGAAAAAGA-AG-GAAGAGGAGGAAGATGAGGAAGATG 2257 T AA G GAAAA AGCA GA GA AG GAAG GA GAAGA GAGGAAGA G Sbjct: 344 T-AATGAGGAAAATGGGGAGCAGGAGGCTGACAGTGAAGTAGATGAAGAAGAGGAAGAAG 402 Query: 2258 AAGAGGATGAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATG 2317 G GGA GA GAGGAGGAGGAAGA GAAG GATG GA GAAGA GA G GATGA G Sbjct: 403 GTGGGGAGGAAGAGGAGGAGGAAGAAGAAGGTGATGGTGAGGAAGAGGATGGAGATGAAG 462 Query: 2318 ATGAATAAGTTGGTTC 2333 ATGA AAG TG TC Sbjct: 463 ATGAGGAAGCTGAGTC 478 WARNING: HSPs involving 1190 database sequences were not reported due to the limiting value of parameter B = 250. Parameters: ctxfactor=2.00 E=10 Query ----- As Used ----- ----- Computed ---- Strand MatID Matrix name Lambda K H Lambda K H +1 0 +5,-4 0.192 0.173 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a -1 0 +5,-4 0.192 0.173 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a Query Strand MatID Length Eff.Length E S W T X E2 S2 +1 0 2575 2575 10. 214 11 n/a 73 0.024 82 102 0.023 124 -1 0 2575 2575 10. 214 11 n/a 73 0.024 82 102 0.023 124 Statistics: Database: /dbEST1/wublast/database/embl/embl.fas Title: embl Release date: unknown Posted date: 12:04 PM GMT Feb 21, 2000 Format: BLAST # of letters in database: 675,252,082 # of sequences in database: 442,729 # of database sequences satisfying E: 1440 No. of states in DFA: 255 (255 KB) Total size of DFA: 313 KB (320 KB) Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00 No. of threads or processors used: 2 Search cpu time: 83.90u 2.19s 86.09t Elapsed: 00:01:01 Total cpu time: 85.13u 2.36s 87.49t Elapsed: 00:01:04 Start: Mon Feb 21 12:11:11 2000 End: Mon Feb 21 12:12:15 2000 WARNINGS ISSUED: 2